pycom03g13500

Belongs to the mitochondrial carrier (TC 2.A.29) family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
Physical Location & Seq
Reverse (-)
14543953 .. 14545285
1333 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom03g13500.2

Sequence Viewer

Length: 1155 bp
ATGGCTGATAGGCGCCAGCACCCAACTATCACGGAAAAGTTTTCTGGTCATGAGCTACATCTGAGTTCCAGCCACTATGGGGTCATCCAGAGGCCTTCTATCAATCAAAGGCGCTTTTCATATGGAAGTTATTCAAATGCAGCATTGCAATATCCCATGAACCAAGCATGTCGAGCTAATGATCCGTTGGTGGGTTCACGTGCCTTTCCTGTGTGTATCGAAGCCCCAAAGGAGAAAGGATTTTCGGGCTTTGCAATTGATTTTCTAATGGGTGGCGTTTCTGCTGCTGTATCCAAGACTGCTGCTGCTCCAATTGAGCGTGTAAAGCTCTTAATTCAAAATCAGGATGAGATGATCAAGGCTGGCAGGCTCTCTGAACCCTACAAGGGAATTGGAGATTGTTTTAGCCGAACAATGAAAGATGAGGGGATGGTAGCATTGTGGAGAGGAAACACGGCAAATGTCATCCGTTACTTCCCAACTCAGGCCTTAAACTTTGCGTTTAAAGATTACTTCAAAAGCCTGTTCAATTTCAGAAAGGACAAGGATGGCTACTGGAAATGGTTTGCCGGTAACTTGGCATCTGGAGGTGCTGCTGGTGCCTCTTCTCTATTCTTTGTCTACTCTTTGGATTATGCTCGTACGCGTCTTGCAAATGATTCCAAGGCTGCAAAGAAGGGAGGAGAGAGGCAATTCAATGGCCTGGTTGATGTCTACAAAAAGACTCTCAAGTCAGATGGCATTGCTGGCCTTTACCGCGGCTTCAACATTTCTTGTGTCGGAATCATTGTGTACCGTGGTCTGTACTTTGGAATGTATGATTCTTTGAAGCTTGCGATCCTCACTGGAAAGTTGCAGGATAGTTTCTTTGCTAGCTTTGGTCTTGGTTGGGTTATCACCAACGGTGCTGGACTTGCATCTTACCCAATTGACACTGTCCGTAGAAGGATGATGATGACATCTGGTGAAGCCGTCAAGTACAAGAGCTCGCTCGACGCTTTCTCTCAAATCCTTAAGAACGAGGGTGCGAAGTCTCTCTTCAAGGGTGCTGGTGCTAACATTCTTCGTGCAGTTGCTGGTGCGGGTGTGCTTGCAGGTTACGACAAGCTTCAGGTGCTAGTGTTCGGAAAGAAGTATGGTTCTGGTGGAGCTTAA

Protein Analysis

385

Amino Acids

41.99

Weight (kDa)

9.76

Isoelectric Point (pI)

27.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 730
Acc36I ACCTGC 1 cut(s) 1085
AccB1I GGYRCC 2 cut(s) 12, 599
AccI GTMKAC 2 cut(s) 621, 714
AccII CGCG 2 cut(s) 646, 759
AciI CCGC 3 cut(s) 757, 759, 1082
AclWI GGATC 2 cut(s) 176, 832
AcuI CTGAAG 1 cut(s) 1094
AcvI CACGTG 1 cut(s) 200
AcyI GRCGYC 1 cut(s) 13
AfaI GTAC 4 cut(s) 643, 794, 806, 980
AfiI CCNNNNNNNGG 4 cut(s) 79, 191, 386, 484
AflII CTTAAG 1 cut(s) 1013
AflIII ACRYGT 1 cut(s) 644
AgsI TTSAA 8 cut(s) 135, 338, 517, 529, 697, 766, 829, 1042
AjnI CCWGG 1 cut(s) 702
AluBI AGCT 8 cut(s) 55, 176, 328, 832, 876, 987, 1108, 1151
AluI AGCT 8 cut(s) 55, 176, 328, 832, 876, 987, 1108, 1151
Alw21I GWGCWC 1 cut(s) 989
Alw26I GTCTC 1 cut(s) 1038
AlwI GGATC 2 cut(s) 176, 832
AlwNI CAGNNNCTG 1 cut(s) 1076
AoxI GGCC 4 cut(s) 92, 486, 700, 748
ApeKI GCWGC 6 cut(s) 140, 284, 302, 305, 593, 668
Asp700I GAANNNNTTC 1 cut(s) 130
AspLEI GCGC 2 cut(s) 15, 114
AsuHPI GGTGA 2 cut(s) 889, 977
AsuNHI GCTAGC 1 cut(s) 872
BanI GGYRCC 2 cut(s) 12, 599
BanII GRGCYC 1 cut(s) 989
BbrPI CACGTG 1 cut(s) 200
Bbv12I GWGCWC 1 cut(s) 989
BbvI GCAGC 6 cut(s) 152, 271, 289, 292, 580, 655
BccI CCATC 3 cut(s) 424, 542, 731
BceAI ACGGC 2 cut(s) 471, 956
BciT130I CCWGG 1 cut(s) 704
BciVI GTATCC 1 cut(s) 301
BclI TGATCA 1 cut(s) 354
BcoDI GTCTC 1 cut(s) 1038
BfaI CTAG 2 cut(s) 873, 1118
BfoI RGCGCY 2 cut(s) 16, 115
BfrI CTTAAG 1 cut(s) 1013
BfuAI ACCTGC 1 cut(s) 1085
BfuI GTATCC 1 cut(s) 301
BisI GCNGC 7 cut(s) 141, 285, 303, 306, 594, 669, 760
BlsI GCNGC 7 cut(s) 142, 286, 304, 307, 595, 670, 761
Bme1390I CCNGG 1 cut(s) 704
BmiI GGNNCC 2 cut(s) 14, 601
BmrFI CCNGG 1 cut(s) 704
BmsI GCATC 2 cut(s) 590, 926
BmtI GCTAGC 1 cut(s) 876
BpmI CTGGAG 1 cut(s) 606
BpuEI CTTGAG 1 cut(s) 713
BsaAI YACGTR 1 cut(s) 200
BsaHI GRCGYC 1 cut(s) 13
BsaJI CCNNGG 3 cut(s) 663, 757, 796
Bsc4I CCNNNNNNNGG 4 cut(s) 79, 191, 386, 484
Bse118I RCCGGY 1 cut(s) 569
Bse1I ACTGG 2 cut(s) 560, 850
Bse3DI GCAATG 2 cut(s) 143, 741
BseBI CCWGG 1 cut(s) 704
BseDI CCNNGG 3 cut(s) 663, 757, 796
BseGI GGATG 6 cut(s) 84, 352, 435, 465, 553, 954
BseLI CCNNNNNNNGG 4 cut(s) 79, 191, 386, 484
BseMI GCAATG 2 cut(s) 143, 741
BseMII CTCAG 2 cut(s) 53, 497
BseNI ACTGG 2 cut(s) 560, 850
BseRI GAGGAG 1 cut(s) 696
BseXI GCAGC 6 cut(s) 152, 271, 289, 292, 580, 655
BsgI GTGCAG 1 cut(s) 1089
Bsh1236I CGCG 2 cut(s) 646, 759
BshFI GGCC 4 cut(s) 94, 488, 702, 750
BshNI GGYRCC 2 cut(s) 12, 599
BsiHKAI GWGCWC 1 cut(s) 989
BsiSI CCGG 1 cut(s) 570
BsiWI CGTACG 1 cut(s) 641
BslI CCNNNNNNNGG 4 cut(s) 79, 191, 386, 484
BsmAI GTCTC 1 cut(s) 1038
BsnI GGCC 4 cut(s) 94, 488, 702, 750
Bsp1286I GDGCHC 1 cut(s) 989
Bsp143I GATC 3 cut(s) 181, 354, 837
BspACI CCGC 3 cut(s) 757, 759, 1082
BspANI GGCC 4 cut(s) 94, 488, 702, 750
BspCNI CTCAG 2 cut(s) 54, 496
BspFNI CGCG 2 cut(s) 646, 759
BspHI TCATGA 1 cut(s) 49
BspLI GGNNCC 2 cut(s) 14, 601
BspMI ACCTGC 1 cut(s) 1085
BspOI GCTAGC 1 cut(s) 876
BspPI GGATC 2 cut(s) 176, 832
BspT107I GGYRCC 2 cut(s) 12, 599
BspTI CTTAAG 1 cut(s) 1013
BsrDI GCAATG 2 cut(s) 143, 741
BsrFI RCCGGY 1 cut(s) 569
BsrI ACTGG 2 cut(s) 560, 850
BssAI RCCGGY 1 cut(s) 569
BssECI CCNNGG 3 cut(s) 663, 757, 796
BssMI GATC 3 cut(s) 181, 354, 837
BssNI GRCGYC 1 cut(s) 13
BssT1I CCWWGG 1 cut(s) 663
Bst2UI CCWGG 1 cut(s) 704
Bst4CI ACNGT 3 cut(s) 797, 905, 937
Bst6I CTCTTC 2 cut(s) 610, 1043
BstACI GRCGYC 1 cut(s) 13
BstAFI CTTAAG 1 cut(s) 1013
BstBAI YACGTR 1 cut(s) 200
BstC8I GCNNGC 8 cut(s) 17, 364, 368, 748, 834, 874, 989, 1092
BstDEI CTNAG 2 cut(s) 62, 483
BstDSI CCRYGG 2 cut(s) 757, 796
BstF5I GGATG 6 cut(s) 84, 352, 435, 465, 553, 954
BstFNI CGCG 2 cut(s) 646, 759
BstH2I RGCGCY 2 cut(s) 16, 115
BstHHI GCGC 2 cut(s) 15, 114
BstKTI GATC 3 cut(s) 184, 357, 840
BstMAI GTCTC 1 cut(s) 1038
BstMBI GATC 3 cut(s) 181, 354, 837
BstMWI GCNNNNNNNGC 7 cut(s) 173, 325, 599, 747, 756, 914, 1114
BstNI CCWGG 1 cut(s) 704
BstNSI RCATGY 1 cut(s) 171
BstSCI CCNGG 1 cut(s) 702
BstUI CGCG 2 cut(s) 646, 759
BstV1I GCAGC 6 cut(s) 152, 271, 289, 292, 580, 655
BsuI GTATCC 1 cut(s) 301
BsuRI GGCC 4 cut(s) 94, 488, 702, 750
BtgI CCRYGG 2 cut(s) 757, 796
BtsCI GGATG 6 cut(s) 84, 352, 435, 465, 553, 954
BtsIMutI CAGTG 2 cut(s) 843, 933
BveI ACCTGC 1 cut(s) 1085
Cac8I GCNNGC 8 cut(s) 17, 364, 368, 748, 834, 874, 989, 1092
CaiI CAGNNNCTG 1 cut(s) 1076
CciI TCATGA 1 cut(s) 49
CfoI GCGC 2 cut(s) 15, 114
Cfr10I RCCGGY 1 cut(s) 569
Cfr42I CCGCGG 1 cut(s) 760
CseI GACGC 2 cut(s) 635, 1004
Csp6I GTAC 4 cut(s) 642, 793, 805, 979
CviAII CATG 3 cut(s) 50, 157, 168
CviQI GTAC 4 cut(s) 642, 793, 805, 979
DdeI CTNAG 2 cut(s) 62, 483
DinI GGCGCC 1 cut(s) 14
DpnI GATC 3 cut(s) 183, 356, 839
DpnII GATC 3 cut(s) 181, 354, 837
DraI TTTAAA 1 cut(s) 505
DrdI GACNNNNNNGTC 1 cut(s) 730
DseDI GACNNNNNNGTC 1 cut(s) 730
Eam1104I CTCTTC 2 cut(s) 610, 1043
EarI CTCTTC 2 cut(s) 610, 1043
Ecl136II GAGCTC 1 cut(s) 987
Eco130I CCWWGG 1 cut(s) 663
Eco147I AGGCCT 2 cut(s) 94, 488
Eco24I GRGCYC 1 cut(s) 989
Eco53kI GAGCTC 1 cut(s) 987
Eco57I CTGAAG 1 cut(s) 1094
Eco72I CACGTG 1 cut(s) 200
EcoICRI GAGCTC 1 cut(s) 987
EcoRII CCWGG 1 cut(s) 702
EcoT14I CCWWGG 1 cut(s) 663
EcoT38I GRGCYC 1 cut(s) 989
EgeI GGCGCC 1 cut(s) 14
EheI GGCGCC 1 cut(s) 14
ErhI CCWWGG 1 cut(s) 663
FaeI CATG 3 cut(s) 53, 160, 171
FaiI YATR 9 cut(s) 51, 78, 121, 123, 158, 169, 636, 819, 1137
FalI AAGNNNNNCTT 2 cut(s) 1022, 1054
FatI CATG 3 cut(s) 49, 156, 167
FauI CCCGC 1 cut(s) 1075
FauNDI CATATG 1 cut(s) 121
FbaI TGATCA 1 cut(s) 354
FblI GTMKAC 2 cut(s) 621, 714
Fnu4HI GCNGC 7 cut(s) 141, 285, 303, 306, 594, 669, 760
FokI GGATG 6 cut(s) 71, 359, 442, 452, 560, 961
FriOI GRGCYC 1 cut(s) 989
Fsp4HI GCNGC 7 cut(s) 141, 285, 303, 306, 594, 669, 760
FspBI CTAG 2 cut(s) 873, 1118
GlaI GCGC 2 cut(s) 14, 113
GluI GCNGC 7 cut(s) 141, 285, 303, 306, 594, 669, 760
GsuI CTGGAG 1 cut(s) 606
HaeII RGCGCY 2 cut(s) 16, 115
HaeIII GGCC 4 cut(s) 94, 488, 702, 750
HapII CCGG 1 cut(s) 570
HgaI GACGC 2 cut(s) 635, 1004
HhaI GCGC 2 cut(s) 15, 114
Hin1I GRCGYC 1 cut(s) 13
Hin1II CATG 3 cut(s) 53, 160, 171
Hin6I GCGC 2 cut(s) 13, 112
HinP1I GCGC 2 cut(s) 13, 112
HindIII AAGCTT 2 cut(s) 830, 1106
HinfI GANTC 4 cut(s) 659, 724, 783, 821
HpaII CCGG 1 cut(s) 570
HphI GGTGA 2 cut(s) 889, 977
Hpy166II GTNNAC 4 cut(s) 197, 622, 715, 793
Hpy188I TCNGA 6 cut(s) 63, 376, 536, 736, 782, 1127
Hpy188III TCNNGA 4 cut(s) 50, 88, 344, 585
Hpy8I GTNNAC 4 cut(s) 197, 622, 715, 793
Hpy99I CGWCG 1 cut(s) 998
HpyAV CCTTC 3 cut(s) 105, 670, 939
HpyCH4III ACNGT 3 cut(s) 797, 905, 937
HpyCH4IV ACGT 1 cut(s) 199
HpyCH4V TGCA 9 cut(s) 140, 148, 254, 653, 671, 856, 917, 1070, 1094
HpyF10VI GCNNNNNNNGC 7 cut(s) 173, 325, 599, 747, 756, 914, 1114
HpyF3I CTNAG 2 cut(s) 62, 483
HpySE526I ACGT 1 cut(s) 199
Hsp92I GRCGYC 1 cut(s) 13
Hsp92II CATG 3 cut(s) 53, 160, 171
HspAI GCGC 2 cut(s) 13, 112
KasI GGCGCC 1 cut(s) 12
Ksp22I TGATCA 1 cut(s) 354
KspI CCGCGG 1 cut(s) 760
Kzo9I GATC 3 cut(s) 181, 354, 837
LmnI GCTCC 2 cut(s) 313, 1148
Lsp1109I GCAGC 6 cut(s) 152, 271, 289, 292, 580, 655
LweI GCATC 2 cut(s) 590, 926
MaeI CTAG 2 cut(s) 873, 1118
MaeII ACGT 1 cut(s) 199
MaeIII GTNAC 3 cut(s) 470, 572, 1097
MalI GATC 3 cut(s) 183, 356, 839
MboI GATC 3 cut(s) 181, 354, 837
MboII GAAGA 3 cut(s) 597, 1030, 1055
MfeI CAATTG 3 cut(s) 255, 312, 927
MhlI GDGCHC 1 cut(s) 989
MluCI AATT 7 cut(s) 255, 312, 333, 390, 529, 692, 927
MluI ACGCGT 1 cut(s) 644
Mly113I GGCGCC 1 cut(s) 13
MlyI GAGTC 1 cut(s) 718
MmeI TCCRAC 1 cut(s) 760
MnlI CCTC 9 cut(s) 84, 418, 440, 581, 613, 674, 681, 851, 1015
MroXI GAANNNNTTC 1 cut(s) 130
MseI TTAA 5 cut(s) 332, 491, 504, 1014, 1153
MspA1I CMGCKG 1 cut(s) 759
MspCI CTTAAG 1 cut(s) 1013
MspI CCGG 1 cut(s) 570
MspR9I CCNGG 1 cut(s) 704
MunI CAATTG 3 cut(s) 255, 312, 927
MvaI CCWGG 1 cut(s) 704
MvnI CGCG 2 cut(s) 646, 759
MwoI GCNNNNNNNGC 7 cut(s) 173, 325, 599, 747, 756, 914, 1114
NarI GGCGCC 1 cut(s) 13
NdeI CATATG 1 cut(s) 121
NdeII GATC 3 cut(s) 181, 354, 837
NheI GCTAGC 1 cut(s) 872
NlaIII CATG 3 cut(s) 53, 160, 171
NlaIV GGNNCC 2 cut(s) 14, 601
NspI RCATGY 1 cut(s) 171
PagI TCATGA 1 cut(s) 49
PceI AGGCCT 2 cut(s) 94, 488
PdmI GAANNNNTTC 1 cut(s) 130
PfeI GAWTC 3 cut(s) 659, 783, 821
Pfl23II CGTACG 1 cut(s) 641
PflFI GACNNNGTC 1 cut(s) 935
PkrI GCNGC 7 cut(s) 142, 286, 304, 307, 595, 670, 761
PleI GAGTC 1 cut(s) 718
PluTI GGCGCC 1 cut(s) 16
PmaCI CACGTG 1 cut(s) 200
PmlI CACGTG 1 cut(s) 200
PpsI GAGTC 1 cut(s) 718
Ppu21I YACGTR 1 cut(s) 200
Psp124BI GAGCTC 1 cut(s) 989
Psp6I CCWGG 1 cut(s) 702
PspCI CACGTG 1 cut(s) 200
PspGI CCWGG 1 cut(s) 702
PspLI CGTACG 1 cut(s) 641
PspN4I GGNNCC 2 cut(s) 14, 601
PstNI CAGNNNCTG 1 cut(s) 1076
PsyI GACNNNGTC 1 cut(s) 935
RsaI GTAC 4 cut(s) 643, 794, 806, 980
RsaNI GTAC 4 cut(s) 642, 793, 805, 979
SacI GAGCTC 1 cut(s) 989
SacII CCGCGG 1 cut(s) 760
SaqAI TTAA 5 cut(s) 332, 491, 504, 1014, 1153
SatI GCNGC 7 cut(s) 141, 285, 303, 306, 594, 669, 760
Sau3AI GATC 3 cut(s) 181, 354, 837
SchI GAGTC 1 cut(s) 718
ScrFI CCNGG 1 cut(s) 704
SduI GDGCHC 1 cut(s) 989
SfaNI GCATC 2 cut(s) 590, 926
SfoI GGCGCC 1 cut(s) 14
Sfr303I CCGCGG 1 cut(s) 760
SgrBI CCGCGG 1 cut(s) 760
SmlI CTYRAG 2 cut(s) 728, 1013
SmoI CTYRAG 2 cut(s) 728, 1013
Sse9I AATT 7 cut(s) 255, 312, 333, 390, 529, 692, 927
SseBI AGGCCT 2 cut(s) 94, 488
SsiI CCGC 3 cut(s) 757, 759, 1082
SspDI GGCGCC 1 cut(s) 12
SspMI CTAG 2 cut(s) 873, 1118
SstI GAGCTC 1 cut(s) 989
StuI AGGCCT 2 cut(s) 94, 488
StyD4I CCNGG 1 cut(s) 702
StyI CCWWGG 1 cut(s) 663
TaaI ACNGT 3 cut(s) 797, 905, 937
TaiI ACGT 1 cut(s) 202
TaqI TCGA 3 cut(s) 172, 219, 993
TasI AATT 7 cut(s) 255, 312, 333, 390, 529, 692, 927
TatI WGTACW 2 cut(s) 804, 978
TauI GCSGC 1 cut(s) 762
TfiI GAWTC 3 cut(s) 659, 783, 821
Tru1I TTAA 5 cut(s) 332, 491, 504, 1014, 1153
Tru9I TTAA 5 cut(s) 332, 491, 504, 1014, 1153
TscAI CASTG 2 cut(s) 850, 940
TseI GCWGC 6 cut(s) 140, 284, 302, 305, 593, 668
TspDTI ATGAA 3 cut(s) 108, 173, 431
TspGWI ACGGA 4 cut(s) 47, 174, 458, 929
TspRI CASTG 2 cut(s) 850, 940
Tth111I GACNNNGTC 1 cut(s) 935
Vha464I CTTAAG 1 cut(s) 1013
XceI RCATGY 1 cut(s) 171
XmiI GTMKAC 2 cut(s) 621, 714
XmnI GAANNNNTTC 1 cut(s) 130
XspI CTAG 2 cut(s) 873, 1118
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.