Rorug05G0279300

Belongs to the mitochondrial carrier (TC 2.A.29) family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
31720481 .. 31723654
3174 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0279300.1

Sequence Viewer

Length: 3141 bp
ATGGATATGGAAATACTTAGCTGGAATTGCAGTGGGATCTGCAACGACACGACAACTCGGGCTTTGAAAGATCTCATCTCTCAAAACCGGCCTCAGATCATCTTTTTATGTGAAACCAAGATCAGACGCTTGACTGATTTTATTGCACTCCGGTCGGCACTAGGGTTTGCGCACTCAAAGGAGGTTTTGAGTGATGGTCAGTCCGACGGGCGGGGGATGTTCTGGACGGAGGATGTGCAGGTCCAGGTTGGTACTTTTTCTCCTCACCACATCGATATCATGATTGACGGAGGATTTGGGAACCCTAGATGGCGCCTTACGAGTTTCTACGGTTTCTCCAGAACATCCGAAAGTGACCGGTCATGGAAGCTTTTGCGTGATCTGAGGGACCTTGACTCTTTGCCGTGGGTTGTCATAGGAGATTTCAATGAGATCCTTAACAATGGAGAGAAGAAGGATGGTCCGGCTAGGGCCGAGCGACAGATGAGAAGTTTTCGTGAAGCCTTAGGGCCGCAGTCGACATGGTGGAACTCGGAAACCCAACTACGTCTTGATAGAGCAGTGTGTACAGAATCCTGGTGTGACATTTTTGGATTTGCAAGATTGAAACATCTTCCTCCTAGCAACTCCGATCATGTCCCTATATTGCTGCATGCTAGTACGATCCATTTGCCCATAAGGCCGAGACATCACAGGTTCAAATTTGAGTCCTACTGGTTGCAGCATAGTGAGTGTGATGAAGTTGTATCTGGAGCATGGAGAACTGATGTGTCGGGTCCACCCATGTTTCAAGTTGCAAAGAAGATTATGCAATCAAGATTGTCGTTGGATAAATGGCAGAAAAGAACGTTTAAAGGGAGGCAACAACAAATGTTGGGAATTAGGGCAAGAATGGATGAGCTAATTGATGTTACCATTACTGAACCTATTCTGGCTGAGAAGAAGTTGTTGATGGAGAAACTACAATCTTTACTCTCTCAAGAGGAAACATTTTGGAAGCAACGGTCCAAAGTCACCTGGCTTAAAGAAGGGGACCGAAATACCGGTTACTTTCATAGGAAGGCAGCTAATAGGAGGAGGAAGAATACTCTGAATGGGTTGTTTGATGAAACTGGAGAATGGTGTGAGGATGACGAAGGCATGGAGAGCGTTATAACCTCCTATTTTTCTTCTATGTTCACTGCTTCTGATATTGATTTGGCGGCGATGCATACAACACTGGAAGTTATCCAACCGTGTGTGGCTCAGGACATGAATGAACGGCTGTGTGCTGAATACTCTTTGGATGAAGTAAGAGATGCTCTCTTTCAAATGTATCCGACTAAGTCCCCTGGGCCTGATGGGATGCCTCCATTGTTTTTTCAGCATTACTGGAATGACATTGGGGAAGATGTCGCTGCAGCAGTTCGGAGCTTTTTACAGTCAGGTCAGCTACTTAGGCAAATAAACTTCACTCACATTTGTCTAATTCCAAAGGTATCCAATCCTGAACATATGTCTGATTTGAGACCAATAGCGTTGTGTAACGTTATATACAAGATTTGTTCGAAAGTTATTGCTAACAGGTTGAAAGTTATTTTGCCGGATCTGATTTCACCTTTTCAAAGTGCCTTTGTTCCCGGCAGATTGATCACGAACAATATTCTGGTTGCAAATGAATTAGCTCATTTTGTACATAACAAAAGGGACGGGCATGAAGGTTGGATGGCTTTGAAATTGGATCTAAGCAAAGCTTATGACAGAATGGAATGGACTTTTCTAAGAAAGGTCATGGAGCGGTTTGGTTTTGATTCTGCATGGATTGAAATGGTAATGCAATGTGTTTGCTCTGTTAGATATTCTTTCTTGCTTCGTGGTAAACCTCGCGGCCTTGTGATTCCTAGCAGGGGGTTGAGACAAGGAGATCCTTTGTCTCCTTATTTATTTCTTATTGGGGCCGAAGGATTTTCTGCTTTGCTCCAACAGAAACAGAATGCTGGTTTATTGGCTGGGATTGAGATTTGTGATGCTGCTCCTTCGGTAAGCCATTTATTATTTGCTGATGACAGCATGCTCTATGCTTCTGCCTCGTTGGAATCTTGTTATCAAATACAAGATGTTATCGAAACTTATGGGAGAGCTTCTGGACAATTGGTGAATTTTGATAAAAGCTCGGTGGTCTTTAGTAAAAATGTAGCAGCACCTATGCAGGAGGCAGTTGCTAGCTTGTTGGGTGTGAAGGTTGTTGATTCACATGAAAAATATTTAGGGTTACCTACTTACGTTGGAAGGAAGAAAACAGCTACCTTTCAATATATTAAGGAGAATCTAGCCAAGAAGGTGGCTAATTGGCAAGGGAAGTTGTTGAGTGGTGCAGGCCGTGATATTTTAATTAGAGTGGTGGCACAGGCTTTACCCACTTATGCAATGAGTGTCTTCCAATTGACAAAGAATTTTTGTGAGGATTTGGAGCAAATGTGTGCAAGATTCTGGTGGGGGAGTACTCTTGATAAAAGAAAAATCCATTGGAAAACGTGGAAGGCCCTCTGTAACCCTAAAGAGGAAGGGGGCTTAGGGTTTCGCAGTTTATCCGAATTTAATACAGCTATGTTAGCAAAACAAGCTTGGCGAGTGATTACTAATCCGGAATCTTTGTGTGCACGAATTTTTAAAGCTAGATACTTCCCACAAACTTCTTTTTGGAATGTGGAACCCCATCCCTCTCCATCCTTCTCTTGGAGAAGCATATTTGGCACTCGTGAATTGTTAAGAAAGGGTACTTACTGGCAGGTTGGTAAGGGAGACACTGTGAATGTGTGGTCTGATGCTTGGATTCCTGGAGTACCGAATTGTAAGCCTCAAGAAGGTAATAGTGCAGCAGGAAACATTACTCTGGTTAATGAGCTGATGTGTCAAACTGGTGTGTGGAATGTTCCTTTGATTAGAGACATTTTTCCACTGGCAGAAGCTGCAGCGATACTATCAATCCCTTTGTCTTCAAGGGAGGTGAATGATCGAGTGACTTGGAAACTAGAAAAACATGGTAAGTTTACTGTGAAGACTGCTTATCGGTTTTCTTTTTCTATGTCTTCTTCTAGAAAGCCTTTTGATTTGTCAGTGGGTGTAAAGTTTTGGAAGAAGTTGTCACGCCCCGAATTTTGA

Protein Analysis

1046

Amino Acids

119.32

Weight (kDa)

8.87

Isoelectric Point (pI)

42.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Exo_endo_phos PF03372 6 - 194 1e-14 Endonuclease/Exonuclease/phosphatase family
RVT_1 PF00078 490 - 742 2e-29 Reverse transcriptase (RNA-dependent DNA polymerase)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1154
Acc16I TGCGCA 1 cut(s) 171
Acc36I ACCTGC 2 cut(s) 229, 2758
AccB1I GGYRCC 1 cut(s) 312
AccBSI CCGCTC 1 cut(s) 1777
AccI GTMKAC 1 cut(s) 518
AccII CGCG 1 cut(s) 1866
AccIII TCCGGA 1 cut(s) 2623
AciI CCGC 5 cut(s) 211, 512, 1202, 1777, 1866
AclI AACGTT 2 cut(s) 848, 1527
AclWI GGATC 6 cut(s) 44, 427, 658, 1593, 1728, 1898
AcsI RAATTY 6 cut(s) 701, 2137, 2431, 2573, 2643, 3134
AcyI GRCGYC 1 cut(s) 313
AfaI GTAC 7 cut(s) 253, 568, 661, 1674, 2482, 2758, 2823
AfiI CCNNNNNNNGG 5 cut(s) 210, 1886, 2539, 2715, 2843
AgeI ACCGGT 2 cut(s) 357, 1043
AjnI CCWGG 5 cut(s) 243, 575, 1016, 1330, 2815
AjuI GAANNNNNNNTTGG 2 cut(s) 2488, 2520
Alw21I GWGCWC 1 cut(s) 2641
Alw26I GTCTC 6 cut(s) 679, 1501, 1888, 1917, 2775, 2919
Alw44I GTGCAC 1 cut(s) 2637
AlwI GGATC 6 cut(s) 44, 427, 658, 1593, 1728, 1898
AlwNI CAGNNNCTG 1 cut(s) 2948
Ama87I CYCGRG 1 cut(s) 57
Aor13HI TCCGGA 1 cut(s) 2623
AoxI GGCC 9 cut(s) 89, 471, 509, 680, 1334, 1867, 1935, 2356, 2520
ApaLI GTGCAC 1 cut(s) 2637
ApoI RAATTY 6 cut(s) 701, 2137, 2431, 2573, 2643, 3134
ArsI GACNNNNNNTTYG 2 cut(s) 278, 310
AsiGI ACCGGT 2 cut(s) 357, 1043
Asp700I GAANNNNTTC 1 cut(s) 927
AspLEI GCGC 2 cut(s) 172, 315
AsuC2I CCSGG 1 cut(s) 1620
AsuHPI GGTGA 5 cut(s) 257, 1006, 1587, 2146, 2998
AsuII TTCGAA 1 cut(s) 1547
AsuNHI GCTAGC 1 cut(s) 2201
AvaI CYCGRG 1 cut(s) 57
AvaII GGWCC 6 cut(s) 241, 388, 461, 776, 1005, 1033
AxyI CCTNAGG 1 cut(s) 505
BaeGI GKGCMC 1 cut(s) 2641
BanI GGYRCC 1 cut(s) 312
BauI CACGAG 1 cut(s) 2736
BbsI GAAGAC 4 cut(s) 2407, 2967, 3044, 3060
Bbv12I GWGCWC 1 cut(s) 2641
BccI CCATC 8 cut(s) 188, 303, 452, 946, 1334, 1699, 2703, 2713
BceAI ACGGC 3 cut(s) 388, 1277, 2343
BcgI CGANNNNNNTGC 4 cut(s) 135, 169, 652, 686
BciT130I CCWGG 5 cut(s) 245, 577, 1018, 1332, 2817
BciVI GTATCC 2 cut(s) 1326, 1489
BclI TGATCA 1 cut(s) 1629
BcnI CCSGG 1 cut(s) 1620
BcoDI GTCTC 6 cut(s) 679, 1501, 1888, 1917, 2775, 2919
BfmI CTRYAG 2 cut(s) 1398, 2949
BfoI RGCGCY 1 cut(s) 316
BfuAI ACCTGC 2 cut(s) 229, 2758
BfuI GTATCC 2 cut(s) 1326, 1489
BglI GCCNNNNNGGC 1 cut(s) 679
BglII AGATCT 1 cut(s) 70
BmcAI AGTACT 1 cut(s) 2482
Bme1390I CCNGG 6 cut(s) 245, 577, 1018, 1332, 1620, 2817
Bme18I GGWCC 6 cut(s) 241, 388, 461, 776, 1005, 1033
BmeT110I CYCGRG 1 cut(s) 57
BmiI GGNNCC 7 cut(s) 302, 314, 389, 777, 1034, 1936, 2691
BmrFI CCNGG 6 cut(s) 245, 577, 1018, 1332, 1620, 2817
BmsI GCATC 5 cut(s) 1197, 1288, 1335, 1996, 2794
BmtI GCTAGC 1 cut(s) 2205
BpiI GAAGAC 4 cut(s) 2407, 2967, 3044, 3060
BplI GAGNNNNNCTC 2 cut(s) 1287, 1319
BpmI CTGGAG 4 cut(s) 322, 771, 1134, 2838
Bpu10I CCTNAGC 2 cut(s) 1245, 2551
Bpu14I TTCGAA 1 cut(s) 1547
BpuEI CTTGAG 2 cut(s) 963, 2823
BpuMI CCSGG 1 cut(s) 1620
Bsa29I ATCGAT 1 cut(s) 273
BsaHI GRCGYC 1 cut(s) 313
BsaI GGTCTC 1 cut(s) 1501
BsaJI CCNNGG 3 cut(s) 404, 1330, 1331
BsaWI WCCGGW 4 cut(s) 150, 357, 1043, 2623
BsaXI ACNNNNNCTCC 8 cut(s) 244, 274, 320, 350, 2441, 2471, 2772, 2802
Bsc4I CCNNNNNNNGG 5 cut(s) 210, 1886, 2539, 2715, 2843
Bse118I RCCGGY 3 cut(s) 87, 357, 1043
Bse1I ACTGG 7 cut(s) 719, 1117, 1224, 1376, 2768, 2902, 2943
Bse21I CCTNAGG 1 cut(s) 505
Bse3DI GCAATG 2 cut(s) 1823, 2412
BseAI TCCGGA 1 cut(s) 2623
BseBI CCWGG 5 cut(s) 245, 577, 1018, 1332, 2817
BseCI ATCGAT 1 cut(s) 273
BseDI CCNNGG 3 cut(s) 404, 1330, 1331
BseLI CCNNNNNNNGG 5 cut(s) 210, 1886, 2539, 2715, 2843
BseMI GCAATG 2 cut(s) 1823, 2412
BseMII CTCAG 4 cut(s) 107, 374, 927, 1259
BseNI ACTGG 7 cut(s) 719, 1117, 1224, 1376, 2768, 2902, 2943
BseRI GAGGAG 2 cut(s) 252, 1090
BseSI GKGCMC 1 cut(s) 2641
BseYI CCCAGC 1 cut(s) 1988
BsgI GTGCAG 3 cut(s) 257, 2373, 2874
Bsh1236I CGCG 1 cut(s) 1866
Bsh1285I CGRYCG 1 cut(s) 155
BshFI GGCC 9 cut(s) 91, 473, 511, 682, 1336, 1869, 1937, 2358, 2522
BshNI GGYRCC 1 cut(s) 312
BshTI ACCGGT 2 cut(s) 357, 1043
BshVI ATCGAT 1 cut(s) 273
BsiEI CGRYCG 1 cut(s) 155
BsiHKAI GWGCWC 1 cut(s) 2641
BsiHKCI CYCGRG 1 cut(s) 57
BsiSI CCGG 8 cut(s) 88, 151, 358, 464, 1044, 1583, 1620, 2624
BslFI GGGAC 5 cut(s) 401, 623, 1046, 1312, 1700
BslI CCNNNNNNNGG 5 cut(s) 210, 1886, 2539, 2715, 2843
BsmAI GTCTC 6 cut(s) 679, 1501, 1888, 1917, 2775, 2919
BsmFI GGGAC 5 cut(s) 401, 623, 1046, 1312, 1700
BsmI GAATGC 1 cut(s) 1978
BsnI GGCC 9 cut(s) 91, 473, 511, 682, 1336, 1869, 1937, 2358, 2522
Bso31I GGTCTC 1 cut(s) 1501
BsoBI CYCGRG 1 cut(s) 57
Bsp119I TTCGAA 1 cut(s) 1547
Bsp1286I GDGCHC 1 cut(s) 2641
Bsp13I TCCGGA 1 cut(s) 2623
Bsp1407I TGTACA 2 cut(s) 566, 1672
BspACI CCGC 5 cut(s) 211, 512, 1202, 1777, 1866
BspANI GGCC 9 cut(s) 91, 473, 511, 682, 1336, 1869, 1937, 2358, 2522
BspCNI CTCAG 4 cut(s) 106, 375, 928, 1258
BspDI ATCGAT 1 cut(s) 273
BspEI TCCGGA 1 cut(s) 2623
BspFNI CGCG 1 cut(s) 1866
BspHI TCATGA 1 cut(s) 279
BspLI GGNNCC 7 cut(s) 302, 314, 389, 777, 1034, 1936, 2691
BspMAI CTGCAG 2 cut(s) 1402, 2953
BspMI ACCTGC 2 cut(s) 229, 2758
BspOI GCTAGC 1 cut(s) 2205
BspPI GGATC 6 cut(s) 44, 427, 658, 1593, 1728, 1898
BspT104I TTCGAA 1 cut(s) 1547
BspT107I GGYRCC 1 cut(s) 312
BspTNI GGTCTC 1 cut(s) 1501
BsrBI CCGCTC 1 cut(s) 1777
BsrDI GCAATG 2 cut(s) 1823, 2412
BsrFI RCCGGY 3 cut(s) 87, 357, 1043
BsrGI TGTACA 2 cut(s) 566, 1672
BsrI ACTGG 7 cut(s) 719, 1117, 1224, 1376, 2768, 2902, 2943
BssAI RCCGGY 3 cut(s) 87, 357, 1043
BssECI CCNNGG 3 cut(s) 404, 1330, 1331
BssNI GRCGYC 1 cut(s) 313
BssSI CACGAG 1 cut(s) 2736
Bst2BI CACGAG 1 cut(s) 2736
Bst2UI CCWGG 5 cut(s) 245, 577, 1018, 1332, 2817
Bst4CI ACNGT 6 cut(s) 332, 1005, 1236, 1422, 2788, 3034
BstACI GRCGYC 1 cut(s) 313
BstAPI GCANNNNNTGC 1 cut(s) 2948
BstAUI TGTACA 2 cut(s) 566, 1672
BstBI TTCGAA 1 cut(s) 1547
BstC8I GCNNGC 4 cut(s) 654, 2051, 2203, 2356
BstDSI CCRYGG 1 cut(s) 404
BstEII GGTNACC 1 cut(s) 2250
BstENI CCTNNNNNAGG 1 cut(s) 2841
BstFNI CGCG 1 cut(s) 1866
BstH2I RGCGCY 1 cut(s) 316
BstHHI GCGC 2 cut(s) 172, 315
BstMAI GTCTC 6 cut(s) 679, 1501, 1888, 1917, 2775, 2919
BstMCI CGRYCG 1 cut(s) 155
BstMWI GCNNNNNNNGC 8 cut(s) 27, 679, 1146, 1438, 2591, 2600, 2730, 2948
BstNI CCWGG 5 cut(s) 245, 577, 1018, 1332, 2817
BstNSI RCATGY 2 cut(s) 656, 2053
BstPI GGTNACC 1 cut(s) 2250
BstSCI CCNGG 6 cut(s) 243, 575, 1016, 1330, 1618, 2815
BstSFI CTRYAG 2 cut(s) 1398, 2949
BstSLI GKGCMC 1 cut(s) 2641
BstUI CGCG 1 cut(s) 1866
BstV2I GAAGAC 4 cut(s) 2407, 2967, 3044, 3060
BstX2I RGATCY 6 cut(s) 36, 70, 432, 1585, 1720, 1903
BstXI CCANNNNNNTGG 1 cut(s) 2320
BstYI RGATCY 6 cut(s) 36, 70, 432, 1585, 1720, 1903
Bsu15I ATCGAT 1 cut(s) 273
Bsu36I CCTNAGG 1 cut(s) 505
BsuI GTATCC 2 cut(s) 1326, 1489
BsuRI GGCC 9 cut(s) 91, 473, 511, 682, 1336, 1869, 1937, 2358, 2522
BsuTUI ATCGAT 1 cut(s) 273
BtgI CCRYGG 1 cut(s) 404
BtgZI GCGATG 1 cut(s) 1220
BtsI GCAGTG 3 cut(s) 37, 567, 1179
BtsIMutI CAGTG 7 cut(s) 37, 567, 1179, 1217, 2784, 2936, 3102
BveI ACCTGC 2 cut(s) 229, 2758
Cac8I GCNNGC 4 cut(s) 654, 2051, 2203, 2356
CaiI CAGNNNCTG 1 cut(s) 2948
CciI TCATGA 1 cut(s) 279
CfoI GCGC 2 cut(s) 172, 315
Cfr10I RCCGGY 3 cut(s) 87, 357, 1043
ClaI ATCGAT 1 cut(s) 273
CseI GACGC 1 cut(s) 135
Csp6I GTAC 7 cut(s) 252, 567, 660, 1673, 2481, 2757, 2822
CspAI ACCGGT 2 cut(s) 357, 1043
CviQI GTAC 7 cut(s) 252, 567, 660, 1673, 2481, 2757, 2822
DinI GGCGCC 1 cut(s) 314
DraI TTTAAA 2 cut(s) 853, 2650
Eco31I GGTCTC 1 cut(s) 1501
Eco32I GATATC 1 cut(s) 277
Eco47I GGWCC 6 cut(s) 241, 388, 461, 776, 1005, 1033
Eco81I CCTNAGG 1 cut(s) 505
Eco88I CYCGRG 1 cut(s) 57
Eco91I GGTNACC 1 cut(s) 2250
EcoNI CCTNNNNNAGG 1 cut(s) 2841
EcoO109I RGGNCCY 2 cut(s) 388, 2521
EcoO65I GGTNACC 1 cut(s) 2250
EcoRII CCWGG 5 cut(s) 243, 575, 1016, 1330, 2815
EcoRV GATATC 1 cut(s) 277
EcoT22I ATGCAT 1 cut(s) 1212
EgeI GGCGCC 1 cut(s) 314
EheI GGCGCC 1 cut(s) 314
FalI AAGNNNNNCTT 2 cut(s) 1717, 1749
FaqI GGGAC 5 cut(s) 401, 623, 1046, 1312, 1700
FauI CCCGC 1 cut(s) 204
FauNDI CATATG 1 cut(s) 1494
FbaI TGATCA 1 cut(s) 1629
FblI GTMKAC 1 cut(s) 518
FspI TGCGCA 1 cut(s) 171
GlaI GCGC 2 cut(s) 171, 314
GsaI CCCAGC 1 cut(s) 1992
GsuI CTGGAG 4 cut(s) 322, 771, 1134, 2838
HaeII RGCGCY 1 cut(s) 316
HaeIII GGCC 9 cut(s) 91, 473, 511, 682, 1336, 1869, 1937, 2358, 2522
HapII CCGG 8 cut(s) 88, 151, 358, 464, 1044, 1583, 1620, 2624
HgaI GACGC 1 cut(s) 135
HhaI GCGC 2 cut(s) 172, 315
Hin1I GRCGYC 1 cut(s) 313
Hin6I GCGC 2 cut(s) 170, 313
HinP1I GCGC 2 cut(s) 170, 313
HincII GTYRAC 1 cut(s) 519
HindII GTYRAC 1 cut(s) 519
HindIII AAGCTT 3 cut(s) 368, 1731, 2601
HpaII CCGG 8 cut(s) 88, 151, 358, 464, 1044, 1583, 1620, 2624
HphI GGTGA 5 cut(s) 257, 1006, 1587, 2146, 2998
Hpy166II GTNNAC 7 cut(s) 519, 567, 779, 1179, 1859, 2639, 3030
Hpy8I GTNNAC 7 cut(s) 519, 567, 779, 1179, 1859, 2639, 3030
Hpy99I CGWCG 1 cut(s) 209
HpyCH4III ACNGT 6 cut(s) 332, 1005, 1236, 1422, 2788, 3034
HpyCH4IV ACGT 5 cut(s) 547, 848, 1527, 2262, 2513
HpyF10VI GCNNNNNNNGC 8 cut(s) 27, 679, 1146, 1438, 2591, 2600, 2730, 2948
HpySE526I ACGT 5 cut(s) 547, 848, 1527, 2262, 2513
Hsp92I GRCGYC 1 cut(s) 313
HspAI GCGC 2 cut(s) 170, 313
KasI GGCGCC 1 cut(s) 312
Kpn2I TCCGGA 1 cut(s) 2623
Ksp22I TGATCA 1 cut(s) 1629
LmnI GCTCC 6 cut(s) 752, 1410, 1774, 1962, 2017, 2449
LweI GCATC 5 cut(s) 1197, 1288, 1335, 1996, 2794
MaeII ACGT 5 cut(s) 547, 848, 1527, 2262, 2513
MbiI CCGCTC 1 cut(s) 1777
MfeI CAATTG 2 cut(s) 2129, 2420
MflI RGATCY 6 cut(s) 36, 70, 432, 1585, 1720, 1903
MhlI GDGCHC 1 cut(s) 2641
Mly113I GGCGCC 1 cut(s) 313
MlyI GAGTC 2 cut(s) 389, 716
MmeI TCCRAC 8 cut(s) 228, 807, 1255, 1343, 1682, 1984, 2052, 2245
Mph1103I ATGCAT 1 cut(s) 1212
MroI TCCGGA 1 cut(s) 2623
MroXI GAANNNNTTC 1 cut(s) 927
MseI TTAA 9 cut(s) 438, 852, 1023, 2298, 2369, 2577, 2649, 2747, 2877
MspI CCGG 8 cut(s) 88, 151, 358, 464, 1044, 1583, 1620, 2624
MspR9I CCNGG 6 cut(s) 245, 577, 1018, 1332, 1620, 2817
MunI CAATTG 2 cut(s) 2129, 2420
Mva1269I GAATGC 1 cut(s) 1978
MvaI CCWGG 5 cut(s) 245, 577, 1018, 1332, 2817
MvnI CGCG 1 cut(s) 1866
MwoI GCNNNNNNNGC 8 cut(s) 27, 679, 1146, 1438, 2591, 2600, 2730, 2948
NarI GGCGCC 1 cut(s) 313
NciI CCSGG 1 cut(s) 1620
NdeI CATATG 1 cut(s) 1494
NheI GCTAGC 1 cut(s) 2201
NlaIV GGNNCC 7 cut(s) 302, 314, 389, 777, 1034, 1936, 2691
NmeAIII GCCGAG 2 cut(s) 499, 708
NmuCI GTSAC 5 cut(s) 353, 581, 1012, 2998, 3123
NsbI TGCGCA 1 cut(s) 171
NsiI ATGCAT 1 cut(s) 1212
NspI RCATGY 2 cut(s) 656, 2053
NspV TTCGAA 1 cut(s) 1547
PaeI GCATGC 2 cut(s) 656, 2053
PagI TCATGA 1 cut(s) 279
PasI CCCWGGG 1 cut(s) 1331
PctI GAATGC 1 cut(s) 1978
PdmI GAANNNNTTC 1 cut(s) 927
PfeI GAWTC 9 cut(s) 572, 1790, 1876, 2075, 2228, 2305, 2466, 2627, 2812
PflFI GACNNNGTC 1 cut(s) 1324
PfoI TCCNGGA 1 cut(s) 2815
PinAI ACCGGT 2 cut(s) 357, 1043
PleI GAGTC 2 cut(s) 389, 715
PluTI GGCGCC 1 cut(s) 316
PpsI GAGTC 2 cut(s) 389, 715
PpuMI RGGWCCY 1 cut(s) 388
PsiI TTATAA 1 cut(s) 1154
Psp1406I AACGTT 2 cut(s) 848, 1527
Psp5II RGGWCCY 1 cut(s) 388
Psp6I CCWGG 5 cut(s) 243, 575, 1016, 1330, 2815
PspEI GGTNACC 1 cut(s) 2250
PspFI CCCAGC 1 cut(s) 1988
PspGI CCWGG 5 cut(s) 243, 575, 1016, 1330, 2815
PspN4I GGNNCC 7 cut(s) 302, 314, 389, 777, 1034, 1936, 2691
PspPPI RGGWCCY 1 cut(s) 388
PstI CTGCAG 2 cut(s) 1402, 2953
PstNI CAGNNNCTG 1 cut(s) 2948
PsuI RGATCY 6 cut(s) 36, 70, 432, 1585, 1720, 1903
PsyI GACNNNGTC 1 cut(s) 1324
RsaI GTAC 7 cut(s) 253, 568, 661, 1674, 2482, 2758, 2823
RsaNI GTAC 7 cut(s) 252, 567, 660, 1673, 2481, 2757, 2822
SalI GTCGAC 1 cut(s) 517
SaqAI TTAA 9 cut(s) 438, 852, 1023, 2298, 2369, 2577, 2649, 2747, 2877
ScaI AGTACT 1 cut(s) 2482
SchI GAGTC 2 cut(s) 389, 716
ScrFI CCNGG 6 cut(s) 245, 577, 1018, 1332, 1620, 2817
SduI GDGCHC 1 cut(s) 2641
SfaNI GCATC 5 cut(s) 1197, 1288, 1335, 1996, 2794
SfcI CTRYAG 2 cut(s) 1398, 2949
SfoI GGCGCC 1 cut(s) 314
SfuI TTCGAA 1 cut(s) 1547
SinI GGWCC 6 cut(s) 241, 388, 461, 776, 1005, 1033
SmlI CTYRAG 2 cut(s) 978, 2838
SmoI CTYRAG 2 cut(s) 978, 2838
SphI GCATGC 2 cut(s) 656, 2053
SsiI CCGC 5 cut(s) 211, 512, 1202, 1777, 1866
SspDI GGCGCC 1 cut(s) 312
SspI AATATT 2 cut(s) 1642, 2243
StyD4I CCNGG 6 cut(s) 243, 575, 1016, 1330, 1618, 2815
TaaI ACNGT 6 cut(s) 332, 1005, 1236, 1422, 2788, 3034
TaiI ACGT 5 cut(s) 550, 851, 1530, 2265, 2516
TaqI TCGA 5 cut(s) 273, 518, 1547, 2103, 2995
TaqII GACCGA 1 cut(s) 1050
TatI WGTACW 3 cut(s) 566, 1672, 2480
TauI GCSGC 3 cut(s) 514, 1205, 1869
TfiI GAWTC 9 cut(s) 572, 1790, 1876, 2075, 2228, 2305, 2466, 2627, 2812
Tru1I TTAA 9 cut(s) 438, 852, 1023, 2298, 2369, 2577, 2649, 2747, 2877
Tru9I TTAA 9 cut(s) 438, 852, 1023, 2298, 2369, 2577, 2649, 2747, 2877
TscAI CASTG 7 cut(s) 37, 567, 1186, 1224, 2791, 2943, 3102
TseFI GTSAC 5 cut(s) 353, 581, 1012, 2998, 3123
Tsp45I GTSAC 5 cut(s) 353, 581, 1012, 2998, 3123
TspDTI ATGAA 9 cut(s) 753, 1043, 1122, 1268, 1272, 1302, 1671, 1710, 2250
TspGWI ACGGA 2 cut(s) 242, 303
TspRI CASTG 7 cut(s) 37, 567, 1186, 1224, 2791, 2943, 3102
Tth111I GACNNNGTC 1 cut(s) 1324
VneI GTGCAC 1 cut(s) 2637
VpaK11BI GGWCC 6 cut(s) 241, 388, 461, 776, 1005, 1033
XagI CCTNNNNNAGG 1 cut(s) 2841
XapI RAATTY 6 cut(s) 701, 2137, 2431, 2573, 2643, 3134
XbaI TCTAGA 1 cut(s) 3074
XceI RCATGY 2 cut(s) 656, 2053
XcmI CCANNNNNNNNNTGG 1 cut(s) 2712
XmiI GTMKAC 1 cut(s) 518
XmnI GAANNNNTTC 1 cut(s) 927
ZrmI AGTACT 1 cut(s) 2482
Zsp2I ATGCAT 1 cut(s) 1212
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.