Rorug05G0279400

Belongs to the mitochondrial carrier (TC 2.A.29) family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
31724664 .. 31724816
153 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0279400.1

Sequence Viewer

Length: 153 bp
ATGGTATCAGAGCGGGTTACCCACATGTTTGGTTTCAGCGATAGCTACACGTGCTCACCATCACCCAATATAACTTGTCCACGTGTATGGCTTGAGAAATCGCCACACGTGCGGGGGCGTGTTGAGAATGTGAAAAATGTACTCTCGCATTAG

Protein Analysis

50

Amino Acids

5.72

Weight (kDa)

8.84

Isoelectric Point (pI)

55.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 13
AciI CCGC 2 cut(s) 13, 112
AcvI CACGTG 3 cut(s) 51, 83, 109
AfaI GTAC 1 cut(s) 141
AflIII ACRYGT 4 cut(s) 24, 48, 82, 106
AluBI AGCT 1 cut(s) 45
AluI AGCT 1 cut(s) 45
Alw21I GWGCWC 1 cut(s) 56
AsuHPI GGTGA 2 cut(s) 48, 54
BbrPI CACGTG 3 cut(s) 51, 83, 109
Bbv12I GWGCWC 1 cut(s) 56
BccI CCATC 1 cut(s) 67
BpuEI CTTGAG 1 cut(s) 113
BsaAI YACGTR 3 cut(s) 51, 83, 109
BsiHKAI GWGCWC 1 cut(s) 56
Bsp1286I GDGCHC 1 cut(s) 56
BspACI CCGC 2 cut(s) 13, 112
BsrBI CCGCTC 1 cut(s) 13
BstBAI YACGTR 3 cut(s) 51, 83, 109
BstEII GGTNACC 1 cut(s) 16
BstMWI GCNNNNNNNGC 2 cut(s) 51, 109
BstNSI RCATGY 1 cut(s) 28
BstPI GGTNACC 1 cut(s) 16
BstXI CCANNNNNNTGG 2 cut(s) 29, 87
Csp6I GTAC 1 cut(s) 140
CviAII CATG 1 cut(s) 25
CviJI RGCY 2 cut(s) 45, 91
CviKI_1 RGCY 2 cut(s) 45, 91
CviQI GTAC 1 cut(s) 140
Eco72I CACGTG 3 cut(s) 51, 83, 109
Eco91I GGTNACC 1 cut(s) 16
EcoO65I GGTNACC 1 cut(s) 16
FaeI CATG 1 cut(s) 28
FaiI YATR 3 cut(s) 26, 71, 88
FatI CATG 1 cut(s) 24
FauI CCCGC 2 cut(s) 6, 105
Hin1II CATG 1 cut(s) 28
HphI GGTGA 2 cut(s) 48, 54
Hpy166II GTNNAC 1 cut(s) 80
Hpy188I TCNGA 1 cut(s) 10
Hpy8I GTNNAC 1 cut(s) 80
HpyCH4IV ACGT 3 cut(s) 50, 82, 108
HpyF10VI GCNNNNNNNGC 2 cut(s) 51, 109
HpySE526I ACGT 3 cut(s) 50, 82, 108
Hsp92II CATG 1 cut(s) 28
MaeII ACGT 3 cut(s) 50, 82, 108
MaeIII GTNAC 1 cut(s) 16
MbiI CCGCTC 1 cut(s) 13
MhlI GDGCHC 1 cut(s) 56
MslI CAYNNNNRTG 1 cut(s) 85
MwoI GCNNNNNNNGC 2 cut(s) 51, 109
NlaIII CATG 1 cut(s) 28
NspI RCATGY 1 cut(s) 28
PciI ACATGT 1 cut(s) 24
PmaCI CACGTG 3 cut(s) 51, 83, 109
PmlI CACGTG 3 cut(s) 51, 83, 109
Ppu21I YACGTR 3 cut(s) 51, 83, 109
PscI ACATGT 1 cut(s) 24
PspCI CACGTG 3 cut(s) 51, 83, 109
PspEI GGTNACC 1 cut(s) 16
RsaI GTAC 1 cut(s) 141
RsaNI GTAC 1 cut(s) 140
RseI CAYNNNNRTG 1 cut(s) 85
SduI GDGCHC 1 cut(s) 56
SetI ASST 4 cut(s) 47, 53, 85, 111
SmiMI CAYNNNNRTG 1 cut(s) 85
SmlI CTYRAG 1 cut(s) 92
SmoI CTYRAG 1 cut(s) 92
SsiI CCGC 2 cut(s) 13, 112
TaiI ACGT 3 cut(s) 53, 85, 111
TatI WGTACW 1 cut(s) 139
XceI RCATGY 1 cut(s) 28
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.