F-box associated
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g27870 FvH4_6g28330 |
| malus_domestica | MD01G1181800.v1.1 MD17G1263300.v1.1 |
| prunus_persica | Prupe.3G111700_v2.0.a1 Prupe.3G112000_v2.0.a1 Prupe.3G112200_v2.0.a1 Prupe.3G112200_v2.0.a1 Prupe.3G112400_v2.0.a1 Prupe.3G112400_v2.0.a1 |
| pyrus_communis | pycom17g26350 |
| rosa_chinensis | RchiOBHm_Chr2g0131131 |
| rosa_laevigata | RLG00000019173 RLG00000019176 |
| rosa_multiflora | Rmu_sc0003629.1_g000070 |
| rosa_roxburghii | Rroxscaffold_2G00113130 |
| rosa_rugosa | Rorug02G0327300 |
| rosa_samantha | Rh2AG347600 Rh2AG348000 Rh2BG355200 Rh2BG355300 Rh2CG333800 Rh2CG333900 Rh2CG334000 Rh2CG335100 Rh2DG373000 Rh2DG373300 Rh2DG374100 |
| rosa_wichuraiana | Rw2G028230 Rw2G028250 Rw2G028280 Rw2G028310 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 273 |
| AciI | CCGC | 1 cut(s) | 412 |
| AclWI | GGATC | 2 cut(s) | 397, 504 |
| AcoI | YGGCCR | 1 cut(s) | 1097 |
| AcuI | CTGAAG | 1 cut(s) | 633 |
| AfaI | GTAC | 4 cut(s) | 749, 784, 1042, 1314 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 590, 691 |
| AflII | CTTAAG | 1 cut(s) | 1217 |
| AflIII | ACRYGT | 3 cut(s) | 166, 271, 507 |
| AgeI | ACCGGT | 1 cut(s) | 1449 |
| AgsI | TTSAA | 8 cut(s) | 65, 74, 119, 328, 400, 935, 1247, 1329 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1365 |
| AjiI | CACGTC | 2 cut(s) | 795, 1396 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1258, 1290 |
| Alw26I | GTCTC | 1 cut(s) | 1352 |
| AlwI | GGATC | 2 cut(s) | 397, 504 |
| AoxI | GGCC | 3 cut(s) | 30, 237, 1097 |
| ApeKI | GCWGC | 3 cut(s) | 136, 217, 800 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 191, 223 |
| AsiGI | ACCGGT | 1 cut(s) | 1449 |
| AspS9I | GGNCC | 4 cut(s) | 83, 250, 282, 1056 |
| AsuC2I | CCSGG | 1 cut(s) | 1353 |
| AsuHPI | GGTGA | 5 cut(s) | 353, 365, 605, 1178, 1390 |
| AvaII | GGWCC | 4 cut(s) | 83, 250, 282, 1056 |
| BalI | TGGCCA | 1 cut(s) | 1099 |
| BbsI | GAAGAC | 1 cut(s) | 683 |
| BbvCI | CCTCAGC | 1 cut(s) | 234 |
| BbvI | GCAGC | 3 cut(s) | 123, 204, 812 |
| BccI | CCATC | 4 cut(s) | 41, 437, 1079, 1288 |
| BciVI | GTATCC | 1 cut(s) | 374 |
| BcnI | CCSGG | 1 cut(s) | 1353 |
| BcoDI | GTCTC | 1 cut(s) | 1352 |
| BfaI | CTAG | 2 cut(s) | 728, 1362 |
| BfmI | CTRYAG | 1 cut(s) | 1198 |
| BfrI | CTTAAG | 1 cut(s) | 1217 |
| BfuI | GTATCC | 1 cut(s) | 374 |
| BglII | AGATCT | 1 cut(s) | 97 |
| BisI | GCNGC | 3 cut(s) | 137, 218, 801 |
| BlpI | GCTNAGC | 1 cut(s) | 213 |
| BlsI | GCNGC | 3 cut(s) | 138, 219, 802 |
| BmcAI | AGTACT | 1 cut(s) | 1314 |
| Bme1390I | CCNGG | 1 cut(s) | 1353 |
| Bme18I | GGWCC | 4 cut(s) | 83, 250, 282, 1056 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1365 |
| BmgBI | CACGTC | 2 cut(s) | 795, 1396 |
| BmgT120I | GGNCC | 4 cut(s) | 83, 250, 282, 1056 |
| BmiI | GGNNCC | 2 cut(s) | 84, 489 |
| BmrFI | CCNGG | 1 cut(s) | 1353 |
| BmsI | GCATC | 3 cut(s) | 334, 1378, 1409 |
| BpiI | GAAGAC | 1 cut(s) | 683 |
| BpmI | CTGGAG | 1 cut(s) | 959 |
| Bpu10I | CCTNAGC | 2 cut(s) | 27, 234 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 213 |
| BpuEI | CTTGAG | 2 cut(s) | 317, 1265 |
| BpuMI | CCSGG | 1 cut(s) | 1353 |
| BsaJI | CCNNGG | 1 cut(s) | 621 |
| BsaWI | WCCGGW | 1 cut(s) | 1449 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 590, 691 |
| Bse118I | RCCGGY | 1 cut(s) | 1449 |
| Bse1I | ACTGG | 1 cut(s) | 942 |
| Bse3DI | GCAATG | 3 cut(s) | 444, 818, 1306 |
| BseDI | CCNNGG | 1 cut(s) | 621 |
| BseGI | GGATG | 4 cut(s) | 429, 631, 741, 1393 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 590, 691 |
| BseMI | GCAATG | 3 cut(s) | 444, 818, 1306 |
| BseMII | CTCAG | 2 cut(s) | 225, 927 |
| BseNI | ACTGG | 1 cut(s) | 942 |
| BseXI | GCAGC | 3 cut(s) | 123, 204, 812 |
| BsgI | GTGCAG | 2 cut(s) | 203, 1356 |
| Bsh1236I | CGCG | 1 cut(s) | 273 |
| BshFI | GGCC | 3 cut(s) | 32, 239, 1099 |
| BshTI | ACCGGT | 1 cut(s) | 1449 |
| BsiSI | CCGG | 2 cut(s) | 1353, 1450 |
| BslFI | GGGAC | 1 cut(s) | 978 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 590, 691 |
| BsmAI | GTCTC | 1 cut(s) | 1352 |
| BsmFI | GGGAC | 1 cut(s) | 978 |
| BsmI | GAATGC | 1 cut(s) | 421 |
| BsnI | GGCC | 3 cut(s) | 32, 239, 1099 |
| Bsp1407I | TGTACA | 1 cut(s) | 747 |
| Bsp143I | GATC | 5 cut(s) | 97, 402, 496, 1202, 1408 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 213 |
| BspACI | CCGC | 1 cut(s) | 412 |
| BspANI | GGCC | 3 cut(s) | 32, 239, 1099 |
| BspCNI | CTCAG | 2 cut(s) | 226, 926 |
| BspFNI | CGCG | 1 cut(s) | 273 |
| BspHI | TCATGA | 1 cut(s) | 1000 |
| BspLI | GGNNCC | 2 cut(s) | 84, 489 |
| BspPI | GGATC | 2 cut(s) | 397, 504 |
| BspTI | CTTAAG | 1 cut(s) | 1217 |
| BsrDI | GCAATG | 3 cut(s) | 444, 818, 1306 |
| BsrFI | RCCGGY | 1 cut(s) | 1449 |
| BsrGI | TGTACA | 1 cut(s) | 747 |
| BsrI | ACTGG | 1 cut(s) | 942 |
| BssAI | RCCGGY | 1 cut(s) | 1449 |
| BssECI | CCNNGG | 1 cut(s) | 621 |
| BssMI | GATC | 5 cut(s) | 97, 402, 496, 1202, 1408 |
| Bst4CI | ACNGT | 3 cut(s) | 286, 671, 1168 |
| Bst6I | CTCTTC | 1 cut(s) | 300 |
| BstAFI | CTTAAG | 1 cut(s) | 1217 |
| BstAUI | TGTACA | 1 cut(s) | 747 |
| BstC8I | GCNNGC | 3 cut(s) | 349, 533, 1346 |
| BstDEI | CTNAG | 4 cut(s) | 27, 213, 234, 913 |
| BstF5I | GGATG | 4 cut(s) | 429, 631, 741, 1393 |
| BstFNI | CGCG | 1 cut(s) | 273 |
| BstKTI | GATC | 5 cut(s) | 100, 405, 499, 1205, 1411 |
| BstMAI | GTCTC | 1 cut(s) | 1352 |
| BstMBI | GATC | 5 cut(s) | 97, 402, 496, 1202, 1408 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 425, 434, 1397 |
| BstNSI | RCATGY | 2 cut(s) | 511, 956 |
| BstSCI | CCNGG | 1 cut(s) | 1351 |
| BstSFI | CTRYAG | 1 cut(s) | 1198 |
| BstUI | CGCG | 1 cut(s) | 273 |
| BstV1I | GCAGC | 3 cut(s) | 123, 204, 812 |
| BstV2I | GAAGAC | 1 cut(s) | 683 |
| BstX2I | RGATCY | 2 cut(s) | 97, 402 |
| BstYI | RGATCY | 2 cut(s) | 97, 402 |
| BsuI | GTATCC | 1 cut(s) | 374 |
| BsuRI | GGCC | 3 cut(s) | 32, 239, 1099 |
| BtrI | CACGTC | 2 cut(s) | 795, 1396 |
| BtsCI | GGATG | 4 cut(s) | 429, 631, 741, 1393 |
| BtsIMutI | CAGTG | 1 cut(s) | 1164 |
| Cac8I | GCNNGC | 3 cut(s) | 349, 533, 1346 |
| CciI | TCATGA | 1 cut(s) | 1000 |
| Cfr10I | RCCGGY | 1 cut(s) | 1449 |
| Cfr13I | GGNCC | 4 cut(s) | 83, 250, 282, 1056 |
| CseI | GACGC | 1 cut(s) | 870 |
| Csp6I | GTAC | 4 cut(s) | 748, 783, 1041, 1313 |
| CspAI | ACCGGT | 1 cut(s) | 1449 |
| CviAII | CATG | 8 cut(s) | 157, 203, 434, 508, 768, 953, 1001, 1259 |
| CviQI | GTAC | 4 cut(s) | 748, 783, 1041, 1313 |
| DdeI | CTNAG | 4 cut(s) | 27, 213, 234, 913 |
| DpnI | GATC | 5 cut(s) | 99, 404, 498, 1204, 1410 |
| DpnII | GATC | 5 cut(s) | 97, 402, 496, 1202, 1408 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1365 |
| EaeI | YGGCCR | 1 cut(s) | 1097 |
| Eam1104I | CTCTTC | 1 cut(s) | 300 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1365 |
| EarI | CTCTTC | 1 cut(s) | 300 |
| Eco147I | AGGCCT | 1 cut(s) | 239 |
| Eco47I | GGWCC | 4 cut(s) | 83, 250, 282, 1056 |
| Eco57I | CTGAAG | 1 cut(s) | 633 |
| EcoO109I | RGGNCCY | 1 cut(s) | 83 |
| EcoRI | GAATTC | 1 cut(s) | 517 |
| FaeI | CATG | 8 cut(s) | 160, 206, 437, 511, 771, 956, 1004, 1262 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 457, 489 |
| FaqI | GGGAC | 1 cut(s) | 978 |
| FatI | CATG | 8 cut(s) | 156, 202, 433, 507, 767, 952, 1000, 1258 |
| FauNDI | CATATG | 1 cut(s) | 871 |
| Fnu4HI | GCNGC | 3 cut(s) | 137, 218, 801 |
| FokI | GGATG | 4 cut(s) | 416, 638, 748, 1400 |
| Fsp4HI | GCNGC | 3 cut(s) | 137, 218, 801 |
| FspBI | CTAG | 2 cut(s) | 728, 1362 |
| GluI | GCNGC | 3 cut(s) | 137, 218, 801 |
| GsuI | CTGGAG | 1 cut(s) | 959 |
| HaeIII | GGCC | 3 cut(s) | 32, 239, 1099 |
| HapII | CCGG | 2 cut(s) | 1353, 1450 |
| HgaI | GACGC | 1 cut(s) | 870 |
| Hin1II | CATG | 8 cut(s) | 160, 206, 437, 511, 771, 956, 1004, 1262 |
| HindIII | AAGCTT | 4 cut(s) | 615, 1220, 1267, 1346 |
| HinfI | GANTC | 3 cut(s) | 631, 702, 1443 |
| HpaII | CCGG | 2 cut(s) | 1353, 1450 |
| HphI | GGTGA | 5 cut(s) | 353, 365, 605, 1178, 1390 |
| Hpy166II | GTNNAC | 3 cut(s) | 289, 750, 1043 |
| Hpy188III | TCNNGA | 7 cut(s) | 74, 119, 400, 611, 635, 1001, 1370 |
| Hpy8I | GTNNAC | 3 cut(s) | 289, 750, 1043 |
| HpyAV | CCTTC | 2 cut(s) | 125, 322 |
| HpyCH4III | ACNGT | 3 cut(s) | 286, 671, 1168 |
| HpyCH4IV | ACGT | 4 cut(s) | 166, 652, 794, 1395 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 425, 434, 1397 |
| HpyF3I | CTNAG | 4 cut(s) | 27, 213, 234, 913 |
| HpySE526I | ACGT | 4 cut(s) | 166, 652, 794, 1395 |
| Hsp92II | CATG | 8 cut(s) | 160, 206, 437, 511, 771, 956, 1004, 1262 |
| Kzo9I | GATC | 5 cut(s) | 97, 402, 496, 1202, 1408 |
| LmnI | GCTCC | 3 cut(s) | 147, 487, 793 |
| LpnPI | CCDG | 7 cut(s) | 253, 287, 333, 624, 923, 1366, 1424 |
| Lsp1109I | GCAGC | 3 cut(s) | 123, 204, 812 |
| LweI | GCATC | 3 cut(s) | 334, 1378, 1409 |
| MaeI | CTAG | 2 cut(s) | 728, 1362 |
| MaeII | ACGT | 4 cut(s) | 166, 652, 794, 1395 |
| MaeIII | GTNAC | 2 cut(s) | 665, 1168 |
| MalI | GATC | 5 cut(s) | 99, 404, 498, 1204, 1410 |
| MboI | GATC | 5 cut(s) | 97, 402, 496, 1202, 1408 |
| MboII | GAAGA | 4 cut(s) | 92, 317, 688, 1043 |
| MflI | RGATCY | 2 cut(s) | 97, 402 |
| MlsI | TGGCCA | 1 cut(s) | 1099 |
| MluI | ACGCGT | 1 cut(s) | 271 |
| MluNI | TGGCCA | 1 cut(s) | 1099 |
| MlyI | GAGTC | 2 cut(s) | 640, 711 |
| MmeI | TCCRAC | 3 cut(s) | 277, 465, 944 |
| MnlI | CCTC | 9 cut(s) | 229, 268, 386, 576, 616, 934, 936, 968, 1358 |
| Mox20I | TGGCCA | 1 cut(s) | 1099 |
| MscI | TGGCCA | 1 cut(s) | 1099 |
| MseI | TTAA | 7 cut(s) | 480, 1074, 1130, 1155, 1208, 1218, 1419 |
| MslI | CAYNNNNRTG | 4 cut(s) | 155, 358, 512, 1292 |
| Msp20I | TGGCCA | 1 cut(s) | 1099 |
| MspCI | CTTAAG | 1 cut(s) | 1217 |
| MspI | CCGG | 2 cut(s) | 1353, 1450 |
| MspR9I | CCNGG | 1 cut(s) | 1353 |
| Mva1269I | GAATGC | 1 cut(s) | 421 |
| MvnI | CGCG | 1 cut(s) | 273 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 425, 434, 1397 |
| NciI | CCSGG | 1 cut(s) | 1353 |
| NdeI | CATATG | 1 cut(s) | 871 |
| NdeII | GATC | 5 cut(s) | 97, 402, 496, 1202, 1408 |
| NlaIII | CATG | 8 cut(s) | 160, 206, 437, 511, 771, 956, 1004, 1262 |
| NlaIV | GGNNCC | 2 cut(s) | 84, 489 |
| NmuCI | GTSAC | 1 cut(s) | 1168 |
| NspI | RCATGY | 2 cut(s) | 511, 956 |
| PagI | TCATGA | 1 cut(s) | 1000 |
| PceI | AGGCCT | 1 cut(s) | 239 |
| PciI | ACATGT | 1 cut(s) | 507 |
| PctI | GAATGC | 1 cut(s) | 421 |
| PfeI | GAWTC | 1 cut(s) | 1443 |
| PflFI | GACNNNGTC | 1 cut(s) | 335 |
| PinAI | ACCGGT | 1 cut(s) | 1449 |
| PkrI | GCNGC | 3 cut(s) | 138, 219, 802 |
| PleI | GAGTC | 2 cut(s) | 639, 710 |
| PpsI | GAGTC | 2 cut(s) | 639, 710 |
| PpuMI | RGGWCCY | 1 cut(s) | 83 |
| PscI | ACATGT | 1 cut(s) | 507 |
| Psp5II | RGGWCCY | 1 cut(s) | 83 |
| PspN4I | GGNNCC | 2 cut(s) | 84, 489 |
| PspPI | GGNCC | 4 cut(s) | 83, 250, 282, 1056 |
| PspPPI | RGGWCCY | 1 cut(s) | 83 |
| PsuI | RGATCY | 2 cut(s) | 97, 402 |
| PsyI | GACNNNGTC | 1 cut(s) | 335 |
| RsaI | GTAC | 4 cut(s) | 749, 784, 1042, 1314 |
| RsaNI | GTAC | 4 cut(s) | 748, 783, 1041, 1313 |
| RseI | CAYNNNNRTG | 4 cut(s) | 155, 358, 512, 1292 |
| SaqAI | TTAA | 7 cut(s) | 480, 1074, 1130, 1155, 1208, 1218, 1419 |
| SatI | GCNGC | 3 cut(s) | 137, 218, 801 |
| Sau3AI | GATC | 5 cut(s) | 97, 402, 496, 1202, 1408 |
| Sau96I | GGNCC | 4 cut(s) | 83, 250, 282, 1056 |
| ScaI | AGTACT | 1 cut(s) | 1314 |
| SchI | GAGTC | 2 cut(s) | 640, 711 |
| ScrFI | CCNGG | 1 cut(s) | 1353 |
| SfaNI | GCATC | 3 cut(s) | 334, 1378, 1409 |
| SfcI | CTRYAG | 1 cut(s) | 1198 |
| SinI | GGWCC | 4 cut(s) | 83, 250, 282, 1056 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 155, 358, 512, 1292 |
| SmlI | CTYRAG | 3 cut(s) | 296, 1217, 1280 |
| SmoI | CTYRAG | 3 cut(s) | 296, 1217, 1280 |
| SseBI | AGGCCT | 1 cut(s) | 239 |
| SsiI | CCGC | 1 cut(s) | 412 |
| SspMI | CTAG | 2 cut(s) | 728, 1362 |
| StuI | AGGCCT | 1 cut(s) | 239 |
| StyD4I | CCNGG | 1 cut(s) | 1351 |
| TaaI | ACNGT | 3 cut(s) | 286, 671, 1168 |
| TaiI | ACGT | 4 cut(s) | 169, 655, 797, 1398 |
| TaqI | TCGA | 2 cut(s) | 36, 634 |
| TatI | WGTACW | 2 cut(s) | 747, 1312 |
| TfiI | GAWTC | 1 cut(s) | 1443 |
| Tru1I | TTAA | 7 cut(s) | 480, 1074, 1130, 1155, 1208, 1218, 1419 |
| Tru9I | TTAA | 7 cut(s) | 480, 1074, 1130, 1155, 1208, 1218, 1419 |
| TscAI | CASTG | 1 cut(s) | 1171 |
| TseFI | GTSAC | 1 cut(s) | 1168 |
| TseI | GCWGC | 3 cut(s) | 136, 217, 800 |
| Tsp45I | GTSAC | 1 cut(s) | 1168 |
| TspDTI | ATGAA | 7 cut(s) | 219, 398, 756, 858, 1128, 1261, 1448 |
| TspRI | CASTG | 1 cut(s) | 1171 |
| Tth111I | GACNNNGTC | 1 cut(s) | 335 |
| Vha464I | CTTAAG | 1 cut(s) | 1217 |
| VpaK11BI | GGWCC | 4 cut(s) | 83, 250, 282, 1056 |
| XceI | RCATGY | 2 cut(s) | 511, 956 |
| XspI | CTAG | 2 cut(s) | 728, 1362 |
| ZrmI | AGTACT | 1 cut(s) | 1314 |