Prupe.5G062600_v2.0.a1

phospholipase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Forward (+)
6811451 .. 6813134
1684 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G062600.1

Sequence Viewer

Length: 1131 bp
ATGCATAGCATAGCAAAAAGGTGGAGGCTTCTCAGCGGCGAGACTGAGTGGGAGGGTCTACTCAACCCTCTCGACCTTGATCTGCGCCGCTATATCCTTCACTACGGGGAAAGGGCTGCTGCCATAGCTGACGCCTTCATTGATGAGACAAAATCGGACAACTGCGGACTTCCTCGATATGCAAAGAGATATTTGTTCTCTAAGGTAGGTTTGGAGAATTCTAATCCATACAAGTACAAGGTGAAGAAATATTTATACGCTGCAACGACATTATCACCCGGGAAATCGATCTGGTTGGGTTACGTTGCAGTGGCAACGGATGAGGGAAAGAAAGTGTTGGGGAGGAGGGACATTTTGGTTTCATGGAGAGGAACTGAGCTGGTGGCAGAGTGGGGTATTGACGTAGTGTTCGATTTGGTTAGTGCTTCTGATATTCTGGGAGAGAAGCATGACCCTAAGGTTCACCATGGTTTCCATTCCTATTACACTCATATTGACCCTCAGTCTCCACACAACAAAACTAGTTGTAGGGCTCAGGCTTTAGCTGCAATTAAAGAAGTAGTGAACCGATACAAGAATGAGACAATCAGCATAACTGTCACCGGCCACAGCATGGGCGCTGCAATGGGAATTTTAAACGCTACAGACATTGTTTATAATGGATACAATAAGCCCCCAGGCCATCCAGTCTGTCCTGTCACAGCCATTGTGTTTGCTGCCCCTCGTCTTGGAGACCAAGGCTTAAGCAATGTGTTCTATGGTCTGAAAAATCTTCACGTCTTGCGTGTCACGAATGACTACGATTTAATCCCTTCTTTACCGCCGTTTGCAAACTATCTTCATGTCGGAAAAGAGCTGAGATTCGACACTTTCAAATCACCGTATTTGAAGGATCCGAAACAGAGCCTGCACAGTTTGGAGGTTTACTTACATGGAGTTGCAGGAACACAAGGAGAAAATGATTTTAAATTGGCAGTTAAACGTGATCTTGCATTAGTAAACAAATATTTGGACGGGCTAAAAGATAAGTATCTTGTAGTTGCTAAGTGGTGGACAGAGAAGAACAAGTCTATGCTTCAAATAGACGACGGCTCCTGGGTGTTGATGGATCATGAAAGTGATGATGATTGA

Protein Analysis

377

Amino Acids

42.35

Weight (kDa)

7.73

Isoelectric Point (pI)

32.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 657
AccB7I CCANNNNNTGG 1 cut(s) 613
AccI GTMKAC 1 cut(s) 58
AciI CCGC 4 cut(s) 36, 88, 165, 821
AclWI GGATC 3 cut(s) 887, 900, 1116
AcoI YGGCCR 1 cut(s) 604
AcsI RAATTY 2 cut(s) 217, 630
AcyI GRCGYC 1 cut(s) 132
AfaI GTAC 1 cut(s) 236
AfiI CCNNNNNNNGG 2 cut(s) 613, 728
AflII CTTAAG 1 cut(s) 742
AgsI TTSAA 3 cut(s) 874, 889, 1079
AhdI GACNNNNNGTC 1 cut(s) 502
AhlI ACTAGT 1 cut(s) 521
AjiI CACGTC 1 cut(s) 778
AjnI CCWGG 2 cut(s) 676, 1094
AluBI AGCT 4 cut(s) 128, 379, 545, 856
AluI AGCT 4 cut(s) 128, 379, 545, 856
Alw26I GTCTC 5 cut(s) 35, 140, 510, 575, 726
AlwI GGATC 3 cut(s) 887, 900, 1116
AlwNI CAGNNNCTG 1 cut(s) 907
Ama87I CYCGRG 1 cut(s) 278
AoxI GGCC 2 cut(s) 604, 679
ApeKI GCWGC 6 cut(s) 116, 119, 260, 545, 620, 716
ApoI RAATTY 2 cut(s) 217, 630
ArsI GACNNNNNNTTYG 2 cut(s) 392, 424
AspLEI GCGC 2 cut(s) 87, 620
AsuC2I CCSGG 2 cut(s) 279, 280
AsuHPI GGTGA 5 cut(s) 253, 267, 455, 592, 870
AvaI CYCGRG 1 cut(s) 278
AxyI CCTNAGG 1 cut(s) 456
BamHI GGATCC 1 cut(s) 892
BanII GRGCYC 1 cut(s) 535
BbvI GCAGC 6 cut(s) 103, 106, 247, 532, 607, 703
BccI CCATC 2 cut(s) 690, 1099
BceAI ACGGC 2 cut(s) 808, 1105
BciT130I CCWGG 2 cut(s) 678, 1096
BciVI GTATCC 1 cut(s) 656
BcnI CCSGG 2 cut(s) 279, 280
BcoDI GTCTC 5 cut(s) 35, 140, 510, 575, 726
BcuI ACTAGT 1 cut(s) 521
BfaI CTAG 1 cut(s) 522
BfmI CTRYAG 1 cut(s) 642
BfoI RGCGCY 1 cut(s) 621
BfrI CTTAAG 1 cut(s) 742
BfuI GTATCC 1 cut(s) 656
BisI GCNGC 8 cut(s) 37, 88, 117, 120, 261, 546, 621, 717
BlsI GCNGC 8 cut(s) 38, 89, 118, 121, 262, 547, 622, 718
Bme1390I CCNGG 4 cut(s) 279, 280, 678, 1096
BmeRI GACNNNNNGTC 1 cut(s) 502
BmeT110I CYCGRG 1 cut(s) 278
BmgBI CACGTC 1 cut(s) 778
BmiI GGNNCC 2 cut(s) 894, 1093
BmrFI CCNGG 4 cut(s) 279, 280, 678, 1096
Bpu10I CCTNAGC 1 cut(s) 534
BpuMI CCSGG 2 cut(s) 279, 280
Bsa29I ATCGAT 1 cut(s) 287
BsaBI GATNNNNATC 1 cut(s) 1029
BsaHI GRCGYC 1 cut(s) 132
BsaI GGTCTC 1 cut(s) 726
BsaJI CCNNGG 5 cut(s) 278, 466, 676, 736, 1095
BsaXI ACNNNNNCTCC 2 cut(s) 1076, 1106
Bsc4I CCNNNNNNNGG 2 cut(s) 613, 728
Bse118I RCCGGY 1 cut(s) 602
Bse1I ACTGG 1 cut(s) 686
Bse21I CCTNAGG 1 cut(s) 456
Bse3DI GCAATG 2 cut(s) 630, 754
Bse8I GATNNNNATC 1 cut(s) 1029
BseBI CCWGG 2 cut(s) 678, 1096
BseCI ATCGAT 1 cut(s) 287
BseDI CCNNGG 5 cut(s) 278, 466, 676, 736, 1095
BseGI GGATG 2 cut(s) 325, 682
BseJI GATNNNNATC 1 cut(s) 1029
BseLI CCNNNNNNNGG 2 cut(s) 613, 728
BseMI GCAATG 2 cut(s) 630, 754
BseMII CTCAG 6 cut(s) 36, 46, 366, 515, 548, 848
BseNI ACTGG 1 cut(s) 686
BseRI GAGGAG 1 cut(s) 358
BseXI GCAGC 6 cut(s) 103, 106, 247, 532, 607, 703
BsgI GTGCAG 1 cut(s) 893
BshFI GGCC 2 cut(s) 606, 681
BshVI ATCGAT 1 cut(s) 287
BsiHKCI CYCGRG 1 cut(s) 278
BsiSI CCGG 2 cut(s) 279, 603
BslFI GGGAC 1 cut(s) 362
BslI CCNNNNNNNGG 2 cut(s) 613, 728
BsmAI GTCTC 5 cut(s) 35, 140, 510, 575, 726
BsmFI GGGAC 1 cut(s) 362
BsnI GGCC 2 cut(s) 606, 681
Bso31I GGTCTC 1 cut(s) 726
BsoBI CYCGRG 1 cut(s) 278
Bsp1286I GDGCHC 1 cut(s) 535
Bsp143I GATC 5 cut(s) 79, 288, 892, 985, 1108
Bsp19I CCATGG 1 cut(s) 466
BspACI CCGC 4 cut(s) 36, 88, 165, 821
BspANI GGCC 2 cut(s) 606, 681
BspCNI CTCAG 6 cut(s) 37, 45, 367, 514, 547, 849
BspDI ATCGAT 1 cut(s) 287
BspHI TCATGA 1 cut(s) 1111
BspLI GGNNCC 2 cut(s) 894, 1093
BspPI GGATC 3 cut(s) 887, 900, 1116
BspTI CTTAAG 1 cut(s) 742
BspTNI GGTCTC 1 cut(s) 726
BsrDI GCAATG 2 cut(s) 630, 754
BsrFI RCCGGY 1 cut(s) 602
BsrI ACTGG 1 cut(s) 686
BssAI RCCGGY 1 cut(s) 602
BssECI CCNNGG 5 cut(s) 278, 466, 676, 736, 1095
BssMI GATC 5 cut(s) 79, 288, 892, 985, 1108
BssNI GRCGYC 1 cut(s) 132
BssT1I CCWWGG 2 cut(s) 466, 736
Bst2UI CCWGG 2 cut(s) 678, 1096
Bst4CI ACNGT 3 cut(s) 598, 882, 914
BstACI GRCGYC 1 cut(s) 132
BstAFI CTTAAG 1 cut(s) 742
BstC8I GCNNGC 1 cut(s) 908
BstDEI CTNAG 9 cut(s) 32, 45, 201, 375, 456, 501, 534, 857, 1044
BstDSI CCRYGG 1 cut(s) 466
BstF5I GGATG 2 cut(s) 325, 682
BstH2I RGCGCY 1 cut(s) 621
BstHHI GCGC 2 cut(s) 87, 620
BstKTI GATC 5 cut(s) 82, 291, 895, 988, 1111
BstMAI GTCTC 5 cut(s) 35, 140, 510, 575, 726
BstMBI GATC 5 cut(s) 79, 288, 892, 985, 1108
BstMWI GCNNNNNNNGC 2 cut(s) 125, 545
BstNI CCWGG 2 cut(s) 678, 1096
BstSCI CCNGG 4 cut(s) 277, 278, 676, 1094
BstSFI CTRYAG 1 cut(s) 642
BstV1I GCAGC 6 cut(s) 103, 106, 247, 532, 607, 703
BstX2I RGATCY 1 cut(s) 892
BstYI RGATCY 1 cut(s) 892
Bsu15I ATCGAT 1 cut(s) 287
Bsu36I CCTNAGG 1 cut(s) 456
BsuI GTATCC 1 cut(s) 656
BsuRI GGCC 2 cut(s) 606, 681
BsuTUI ATCGAT 1 cut(s) 287
BtgI CCRYGG 1 cut(s) 466
BtrI CACGTC 1 cut(s) 778
BtsCI GGATG 2 cut(s) 325, 682
BtsI GCAGTG 1 cut(s) 315
BtsIMutI CAGTG 1 cut(s) 315
Cac8I GCNNGC 1 cut(s) 908
CaiI CAGNNNCTG 1 cut(s) 907
CciI TCATGA 1 cut(s) 1111
CfoI GCGC 2 cut(s) 87, 620
Cfr10I RCCGGY 1 cut(s) 602
Cfr9I CCCGGG 1 cut(s) 278
ClaI ATCGAT 1 cut(s) 287
CseI GACGC 1 cut(s) 140
Csp6I GTAC 1 cut(s) 235
CviAII CATG 7 cut(s) 363, 449, 467, 613, 842, 932, 1112
CviQI GTAC 1 cut(s) 235
DdeI CTNAG 9 cut(s) 32, 45, 201, 375, 456, 501, 534, 857, 1044
DpnI GATC 5 cut(s) 81, 290, 894, 987, 1110
DpnII GATC 5 cut(s) 79, 288, 892, 985, 1108
DraI TTTAAA 2 cut(s) 636, 967
DriI GACNNNNNGTC 1 cut(s) 502
EaeI YGGCCR 1 cut(s) 604
Eam1105I GACNNNNNGTC 1 cut(s) 502
Eco130I CCWWGG 2 cut(s) 466, 736
Eco24I GRGCYC 1 cut(s) 535
Eco31I GGTCTC 1 cut(s) 726
Eco81I CCTNAGG 1 cut(s) 456
Eco88I CYCGRG 1 cut(s) 278
EcoRI GAATTC 1 cut(s) 217
EcoRII CCWGG 2 cut(s) 676, 1094
EcoT14I CCWWGG 2 cut(s) 466, 736
EcoT22I ATGCAT 1 cut(s) 6
EcoT38I GRGCYC 1 cut(s) 535
ErhI CCWWGG 2 cut(s) 466, 736
FaeI CATG 7 cut(s) 366, 452, 470, 616, 845, 935, 1115
FaqI GGGAC 1 cut(s) 362
FatI CATG 7 cut(s) 362, 448, 466, 612, 841, 931, 1111
FblI GTMKAC 1 cut(s) 58
Fnu4HI GCNGC 8 cut(s) 37, 88, 117, 120, 261, 546, 621, 717
FokI GGATG 2 cut(s) 332, 669
FriOI GRGCYC 1 cut(s) 535
Fsp4HI GCNGC 8 cut(s) 37, 88, 117, 120, 261, 546, 621, 717
FspBI CTAG 1 cut(s) 522
GlaI GCGC 2 cut(s) 86, 619
GluI GCNGC 8 cut(s) 37, 88, 117, 120, 261, 546, 621, 717
HaeII RGCGCY 1 cut(s) 621
HaeIII GGCC 2 cut(s) 606, 681
HapII CCGG 2 cut(s) 279, 603
HgaI GACGC 1 cut(s) 140
HhaI GCGC 2 cut(s) 87, 620
Hin1I GRCGYC 1 cut(s) 132
Hin1II CATG 7 cut(s) 366, 452, 470, 616, 845, 935, 1115
Hin6I GCGC 2 cut(s) 85, 618
HinP1I GCGC 2 cut(s) 85, 618
HinfI GANTC 1 cut(s) 861
HpaII CCGG 2 cut(s) 279, 603
HphI GGTGA 5 cut(s) 253, 267, 455, 592, 870
Hpy166II GTNNAC 6 cut(s) 59, 463, 565, 925, 1000, 1053
Hpy188I TCNGA 5 cut(s) 157, 430, 765, 848, 897
Hpy188III TCNNGA 3 cut(s) 71, 790, 1112
Hpy8I GTNNAC 6 cut(s) 59, 463, 565, 925, 1000, 1053
Hpy99I CGWCG 1 cut(s) 1091
HpyAV CCTTC 4 cut(s) 107, 145, 822, 883
HpyCH4III ACNGT 3 cut(s) 598, 882, 914
HpyCH4IV ACGT 4 cut(s) 303, 402, 777, 982
HpyF10VI GCNNNNNNNGC 2 cut(s) 125, 545
HpyF3I CTNAG 9 cut(s) 32, 45, 201, 375, 456, 501, 534, 857, 1044
HpySE526I ACGT 4 cut(s) 303, 402, 777, 982
Hsp92I GRCGYC 1 cut(s) 132
Hsp92II CATG 7 cut(s) 366, 452, 470, 616, 845, 935, 1115
HspAI GCGC 2 cut(s) 85, 618
Kzo9I GATC 5 cut(s) 79, 288, 892, 985, 1108
LmnI GCTCC 1 cut(s) 1097
Lsp1109I GCAGC 6 cut(s) 103, 106, 247, 532, 607, 703
MaeI CTAG 1 cut(s) 522
MaeII ACGT 4 cut(s) 303, 402, 777, 982
MaeIII GTNAC 4 cut(s) 299, 598, 697, 787
MalI GATC 5 cut(s) 81, 290, 894, 987, 1110
MboI GATC 5 cut(s) 79, 288, 892, 985, 1108
MboII GAAGA 4 cut(s) 256, 764, 830, 1072
MflI RGATCY 1 cut(s) 892
MhlI GDGCHC 1 cut(s) 535
MluCI AATT 4 cut(s) 217, 549, 630, 968
MmeI TCCRAC 1 cut(s) 826
Mph1103I ATGCAT 1 cut(s) 6
MseI TTAA 6 cut(s) 552, 635, 743, 806, 966, 978
MslI CAYNNNNRTG 1 cut(s) 1116
MspA1I CMGCKG 1 cut(s) 36
MspCI CTTAAG 1 cut(s) 742
MspI CCGG 2 cut(s) 279, 603
MspR9I CCNGG 4 cut(s) 279, 280, 678, 1096
MvaI CCWGG 2 cut(s) 678, 1096
MwoI GCNNNNNNNGC 2 cut(s) 125, 545
NciI CCSGG 2 cut(s) 279, 280
NcoI CCATGG 1 cut(s) 466
NdeII GATC 5 cut(s) 79, 288, 892, 985, 1108
NlaIII CATG 7 cut(s) 366, 452, 470, 616, 845, 935, 1115
NlaIV GGNNCC 2 cut(s) 894, 1093
NmuCI GTSAC 3 cut(s) 598, 697, 787
NsiI ATGCAT 1 cut(s) 6
PagI TCATGA 1 cut(s) 1111
PcsI WCGNNNNNNNCGW 1 cut(s) 408
PfeI GAWTC 1 cut(s) 861
PflMI CCANNNNNTGG 1 cut(s) 613
PkrI GCNGC 8 cut(s) 38, 89, 118, 121, 262, 547, 622, 718
PsiI TTATAA 1 cut(s) 657
Psp6I CCWGG 2 cut(s) 676, 1094
PspGI CCWGG 2 cut(s) 676, 1094
PspN4I GGNNCC 2 cut(s) 894, 1093
PstNI CAGNNNCTG 1 cut(s) 907
PsuI RGATCY 1 cut(s) 892
RsaI GTAC 1 cut(s) 236
RsaNI GTAC 1 cut(s) 235
RseI CAYNNNNRTG 1 cut(s) 1116
SaqAI TTAA 6 cut(s) 552, 635, 743, 806, 966, 978
SatI GCNGC 8 cut(s) 37, 88, 117, 120, 261, 546, 621, 717
Sau3AI GATC 5 cut(s) 79, 288, 892, 985, 1108
ScrFI CCNGG 4 cut(s) 279, 280, 678, 1096
SduI GDGCHC 1 cut(s) 535
SfcI CTRYAG 1 cut(s) 642
SmaI CCCGGG 1 cut(s) 280
SmiMI CAYNNNNRTG 1 cut(s) 1116
SmlI CTYRAG 1 cut(s) 742
SmoI CTYRAG 1 cut(s) 742
SpeI ACTAGT 1 cut(s) 521
Sse9I AATT 4 cut(s) 217, 549, 630, 968
SsiI CCGC 4 cut(s) 36, 88, 165, 821
SspI AATATT 2 cut(s) 251, 1007
SspMI CTAG 1 cut(s) 522
StyD4I CCNGG 4 cut(s) 277, 278, 676, 1094
StyI CCWWGG 2 cut(s) 466, 736
TaaI ACNGT 3 cut(s) 598, 882, 914
TaiI ACGT 4 cut(s) 306, 405, 780, 985
TaqI TCGA 5 cut(s) 72, 175, 287, 411, 864
TasI AATT 4 cut(s) 217, 549, 630, 968
TatI WGTACW 1 cut(s) 234
TauI GCSGC 2 cut(s) 39, 90
TfiI GAWTC 1 cut(s) 861
Tru1I TTAA 6 cut(s) 552, 635, 743, 806, 966, 978
Tru9I TTAA 6 cut(s) 552, 635, 743, 806, 966, 978
TscAI CASTG 1 cut(s) 315
TseFI GTSAC 3 cut(s) 598, 697, 787
TseI GCWGC 6 cut(s) 116, 119, 260, 545, 620, 716
Tsp45I GTSAC 3 cut(s) 598, 697, 787
TspDTI ATGAA 4 cut(s) 127, 351, 830, 1128
TspGWI ACGGA 1 cut(s) 332
TspMI CCCGGG 1 cut(s) 278
TspRI CASTG 1 cut(s) 315
Van91I CCANNNNNTGG 1 cut(s) 613
Vha464I CTTAAG 1 cut(s) 742
XapI RAATTY 2 cut(s) 217, 630
XmaI CCCGGG 1 cut(s) 278
XmiI GTMKAC 1 cut(s) 58
XspI CTAG 1 cut(s) 522
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.