Rh7DG214500

phospholipase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Forward (+)
20657984 .. 20678700
20717 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG214500.1

Sequence Viewer

Length: 1326 bp
ATGGCCGGAGGTATAGCAACAAGGTGGAGGGTTCTAAGCGGCGAAGACGAGTGGGAGGGTCTACTAGACCCTCTCGACATTGATCTCCGCCACTATGTCATTCACTACGGGGAAAGGGCGGGAGCCGTAGCCGTGGTGAACGAACCAAAGTCGAAGAACTACCGACTTCCTCGATACTTAAAGGAACATTTGTTCTCAAAGGTGGGTTTGCAGAGTGGTAACCCATACAAGTACGTGGTGAAAGAATACTTGTATGCAGCAATCCATCTGCCATTATCGATCGGGAAATCAAACTTTCTCGGTTTTGTTGCGGTTACAACAGATGAAGGAGCCAAAGTGTTGGGAAGGAGGGACGTTTTGATTTCTTGGAGAGGAACCCAGTTGGTACATGAGTGGCTTGTTGACGACGATATCGCTTTAGTTTCAGCTTCTGACATTCTGGGATCGAATAACGGACTCGATCCTTTGGTGCACCAAGGTTGGCTGTCCTACTACACTAATAAGGACATTTTTTCCCCACACAATCAACTACGTAGTTGCAGAGATCAGGTTCTAGCTGCACTTAAATCAGTACTAGAAGAATACAAGGATGAAGAAATCAGCATTACTGTCACTGGTCACAGCATGGGTGCTGCAATGGCAACGTTAAACGCAACCGATATTGTCTGTAACGGACACAACAAACCCACAGATCAATCGGACAAGCAGATTCCTGTGACAGCAATTGTGTTTGCCAGCCCCCGACTAGGCGATGAGGGATTCGAGAAGGTGTTTTCTGGTCTCGAAAACCTTCACGTCTTGCGTGTCACTAATGACCAAGATATTGTTCCTAAATTACCATATTTGGATGGTAAATATGTTCATGTTGGAAAAGAGTTGAGAATCGACAGTCTCAAGTCGCCCTACTTGAAGGTTATCCCTGAATCAGATAAAGCAGGAAGGCTTGGCAGTTTGCACGATGTGGAGGTTTACTTGCATGGTGTTGCAGGGACACAGGGAATCGAAAATAACGATTTTAAATTGGAAGTGAATCGTGATCTCGCACTGGTAAACAAATATATTGATCTTCTGAAGGACGAACATAAGCCCGTCCGCTTCAAGCAACCCTCCACTTTGTTTCCGGCTAGCTTCTCCACATTCTTCACGTTCTCCTTCAGCAATTTGAACCCCTCCTCGATCGGCGGCGAGCTGGCTTTTATCATCTCGCCGGACGATGAGGTTGTCGGAGACGCCGGTGGGTTCTTGGGGCTCCAGAGCGTGGAGGACCCAGGTTCGGGTTCCCGGTCGAGCTTCTTGGCGGTGGACCTCGTAAACAATCATACTTGA

Protein Analysis

441

Amino Acids

48.69

Weight (kDa)

5.46

Isoelectric Point (pI)

33.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lipase_3 PF01764 121 - 282 5.2e-33 Lipase (class 3)
Lectin_legB PF00139 362 - 436 2.1e-08 Legume lectin domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1258
AccI GTMKAC 1 cut(s) 61
AciI CCGC 7 cut(s) 39, 88, 119, 311, 1093, 1182, 1298
AclI AACGTT 1 cut(s) 644
AclWI GGATC 2 cut(s) 451, 455
AcoI YGGCCR 1 cut(s) 3
AcuI CTGAAG 2 cut(s) 1091, 1138
AcyI GRCGYC 1 cut(s) 1230
AdeI CACNNNGTG 1 cut(s) 961
AfaI GTAC 3 cut(s) 233, 387, 573
AfiI CCNNNNNNNGG 4 cut(s) 746, 1258, 1273, 1274
AgsI TTSAA 3 cut(s) 910, 1099, 1165
AjiI CACGTC 1 cut(s) 796
AjnI CCWGG 1 cut(s) 1267
AjuI GAANNNNNNNTTGG 2 cut(s) 810, 842
AloI GAACNNNNNNTCC 2 cut(s) 176, 208
AluBI AGCT 5 cut(s) 428, 557, 1128, 1189, 1290
AluI AGCT 5 cut(s) 428, 557, 1128, 1189, 1290
Alw21I GWGCWC 1 cut(s) 474
Alw26I GTCTC 3 cut(s) 785, 896, 1221
Alw44I GTGCAC 1 cut(s) 470
AlwI GGATC 2 cut(s) 451, 455
AlwNI CAGNNNCTG 1 cut(s) 431
AoxI GGCC 1 cut(s) 3
ApaLI GTGCAC 1 cut(s) 470
ApeKI GCWGC 3 cut(s) 257, 557, 632
Asp700I GAANNNNTTC 1 cut(s) 789
AspS9I GGNCC 2 cut(s) 1264, 1303
AsuC2I CCSGG 1 cut(s) 1282
AsuHPI GGTGA 2 cut(s) 148, 250
AsuNHI GCTAGC 1 cut(s) 1124
AvaII GGWCC 2 cut(s) 1264, 1303
BaeGI GKGCMC 1 cut(s) 474
BaeI ACNNNNGTAYC 2 cut(s) 377, 410
BanII GRGCYC 1 cut(s) 1251
BbsI GAAGAC 1 cut(s) 51
Bbv12I GWGCWC 1 cut(s) 474
BbvI GCAGC 3 cut(s) 269, 544, 619
BccI CCATC 2 cut(s) 273, 842
BceAI ACGGC 2 cut(s) 110, 116
BciT130I CCWGG 1 cut(s) 1269
BcnI CCSGG 1 cut(s) 1282
BcoDI GTCTC 3 cut(s) 785, 896, 1221
BfaI CTAG 5 cut(s) 65, 554, 575, 746, 1125
BisI GCNGC 5 cut(s) 40, 258, 558, 633, 1183
BlsI GCNGC 5 cut(s) 41, 259, 559, 634, 1184
BmcAI AGTACT 1 cut(s) 573
Bme1390I CCNGG 2 cut(s) 1269, 1282
Bme18I GGWCC 2 cut(s) 1264, 1303
BmgBI CACGTC 1 cut(s) 796
BmgT120I GGNCC 2 cut(s) 1264, 1303
BmiI GGNNCC 6 cut(s) 124, 331, 376, 1250, 1266, 1279
BmrFI CCNGG 2 cut(s) 1269, 1282
BmrI ACTGGG 1 cut(s) 373
BmtI GCTAGC 1 cut(s) 1128
BmuI ACTGGG 1 cut(s) 373
BpiI GAAGAC 1 cut(s) 51
BpmI CTGGAG 1 cut(s) 1235
BpuEI CTTGAG 1 cut(s) 878
BpuMI CCSGG 1 cut(s) 1282
Bsa29I ATCGAT 1 cut(s) 278
BsaAI YACGTR 2 cut(s) 235, 533
BsaHI GRCGYC 1 cut(s) 1230
BsaI GGTCTC 1 cut(s) 785
BsaJI CCNNGG 3 cut(s) 132, 475, 1267
BsaXI ACNNNNNCTCC 2 cut(s) 321, 351
Bsc4I CCNNNNNNNGG 4 cut(s) 746, 1258, 1273, 1274
Bse118I RCCGGY 1 cut(s) 1232
Bse1I ACTGG 3 cut(s) 379, 619, 1050
Bse3DI GCAATG 1 cut(s) 642
BseBI CCWGG 1 cut(s) 1269
BseCI ATCGAT 1 cut(s) 278
BseDI CCNNGG 3 cut(s) 132, 475, 1267
BseGI GGATG 2 cut(s) 595, 853
BseLI CCNNNNNNNGG 4 cut(s) 746, 1258, 1273, 1274
BseMI GCAATG 1 cut(s) 642
BseNI ACTGG 3 cut(s) 379, 619, 1050
BseRI GAGGAG 1 cut(s) 1162
BseSI GKGCMC 1 cut(s) 474
BseXI GCAGC 3 cut(s) 269, 544, 619
BsgI GTGCAG 1 cut(s) 543
Bsh1285I CGRYCG 3 cut(s) 282, 1179, 1286
BshFI GGCC 1 cut(s) 5
BshVI ATCGAT 1 cut(s) 278
BsiEI CGRYCG 3 cut(s) 282, 1179, 1286
BsiHKAI GWGCWC 1 cut(s) 474
BsiSI CCGG 5 cut(s) 6, 1121, 1208, 1233, 1282
BslFI GGGAC 2 cut(s) 365, 1003
BslI CCNNNNNNNGG 4 cut(s) 746, 1258, 1273, 1274
BsmAI GTCTC 3 cut(s) 785, 896, 1221
BsmBI CGTCTC 1 cut(s) 1221
BsmFI GGGAC 2 cut(s) 365, 1003
BsnI GGCC 1 cut(s) 5
Bso31I GGTCTC 1 cut(s) 785
Bsp1286I GDGCHC 2 cut(s) 474, 1251
Bsp143I GATC 9 cut(s) 82, 279, 443, 460, 544, 691, 1036, 1063, 1176
BspACI CCGC 7 cut(s) 39, 88, 119, 311, 1093, 1182, 1298
BspANI GGCC 1 cut(s) 5
BspDI ATCGAT 1 cut(s) 278
BspLI GGNNCC 6 cut(s) 124, 331, 376, 1250, 1266, 1279
BspOI GCTAGC 1 cut(s) 1128
BspPI GGATC 2 cut(s) 451, 455
BspTNI GGTCTC 1 cut(s) 785
BsrDI GCAATG 1 cut(s) 642
BsrFI RCCGGY 1 cut(s) 1232
BsrI ACTGG 3 cut(s) 379, 619, 1050
BssAI RCCGGY 1 cut(s) 1232
BssECI CCNNGG 3 cut(s) 132, 475, 1267
BssMI GATC 9 cut(s) 82, 279, 443, 460, 544, 691, 1036, 1063, 1176
BssNI GRCGYC 1 cut(s) 1230
BssT1I CCWWGG 1 cut(s) 475
Bst2UI CCWGG 1 cut(s) 1269
Bst4CI ACNGT 2 cut(s) 610, 890
BstACI GRCGYC 1 cut(s) 1230
BstBAI YACGTR 2 cut(s) 235, 533
BstC8I GCNNGC 4 cut(s) 736, 1126, 1187, 1191
BstDEI CTNAG 1 cut(s) 35
BstDSI CCRYGG 1 cut(s) 132
BstEII GGTNACC 1 cut(s) 218
BstF5I GGATG 2 cut(s) 595, 853
BstKTI GATC 9 cut(s) 85, 282, 446, 463, 547, 694, 1039, 1066, 1179
BstMAI GTCTC 3 cut(s) 785, 896, 1221
BstMBI GATC 9 cut(s) 82, 279, 443, 460, 544, 691, 1036, 1063, 1176
BstMCI CGRYCG 3 cut(s) 282, 1179, 1286
BstMWI GCNNNNNNNGC 1 cut(s) 638
BstNI CCWGG 1 cut(s) 1269
BstPI GGTNACC 1 cut(s) 218
BstSCI CCNGG 2 cut(s) 1267, 1280
BstSLI GKGCMC 1 cut(s) 474
BstSNI TACGTA 1 cut(s) 533
BstV1I GCAGC 3 cut(s) 269, 544, 619
BstV2I GAAGAC 1 cut(s) 51
BstXI CCANNNNNNTGG 1 cut(s) 340
Bsu15I ATCGAT 1 cut(s) 278
BsuRI GGCC 1 cut(s) 5
BsuTUI ATCGAT 1 cut(s) 278
BtgI CCRYGG 1 cut(s) 132
BtgZI GCGATG 1 cut(s) 765
BtrI CACGTC 1 cut(s) 796
BtsCI GGATG 2 cut(s) 595, 853
BtsIMutI CAGTG 2 cut(s) 612, 1043
Cac8I GCNNGC 4 cut(s) 736, 1126, 1187, 1191
CaiI CAGNNNCTG 1 cut(s) 431
Cfr10I RCCGGY 1 cut(s) 1232
Cfr13I GGNCC 2 cut(s) 1264, 1303
ClaI ATCGAT 1 cut(s) 278
CseI GACGC 1 cut(s) 1238
Csp6I GTAC 3 cut(s) 232, 386, 572
CviAII CATG 4 cut(s) 389, 625, 863, 977
CviQI GTAC 3 cut(s) 232, 386, 572
DdeI CTNAG 1 cut(s) 35
DpnI GATC 9 cut(s) 84, 281, 445, 462, 546, 693, 1038, 1065, 1178
DpnII GATC 9 cut(s) 82, 279, 443, 460, 544, 691, 1036, 1063, 1176
DraI TTTAAA 1 cut(s) 1018
DraIII CACNNNGTG 1 cut(s) 961
EaeI YGGCCR 1 cut(s) 3
EciI GGCGGA 1 cut(s) 77
Eco105I TACGTA 1 cut(s) 533
Eco130I CCWWGG 1 cut(s) 475
Eco24I GRGCYC 1 cut(s) 1251
Eco31I GGTCTC 1 cut(s) 785
Eco32I GATATC 1 cut(s) 412
Eco47I GGWCC 2 cut(s) 1264, 1303
Eco57I CTGAAG 2 cut(s) 1091, 1138
Eco91I GGTNACC 1 cut(s) 218
EcoO109I RGGNCCY 1 cut(s) 1264
EcoO65I GGTNACC 1 cut(s) 218
EcoRII CCWGG 1 cut(s) 1267
EcoRV GATATC 1 cut(s) 412
EcoT14I CCWWGG 1 cut(s) 475
EcoT38I GRGCYC 1 cut(s) 1251
ErhI CCWWGG 1 cut(s) 475
Esp3I CGTCTC 1 cut(s) 1221
FaeI CATG 4 cut(s) 392, 628, 866, 980
FaqI GGGAC 2 cut(s) 365, 1003
FatI CATG 4 cut(s) 388, 624, 862, 976
FauI CCCGC 1 cut(s) 112
FblI GTMKAC 1 cut(s) 61
Fnu4HI GCNGC 5 cut(s) 40, 258, 558, 633, 1183
FokI GGATG 2 cut(s) 602, 860
FriOI GRGCYC 1 cut(s) 1251
Fsp4HI GCNGC 5 cut(s) 40, 258, 558, 633, 1183
FspBI CTAG 5 cut(s) 65, 554, 575, 746, 1125
GluI GCNGC 5 cut(s) 40, 258, 558, 633, 1183
GsuI CTGGAG 1 cut(s) 1235
HaeIII GGCC 1 cut(s) 5
HapII CCGG 5 cut(s) 6, 1121, 1208, 1233, 1282
HgaI GACGC 1 cut(s) 1238
Hin1I GRCGYC 1 cut(s) 1230
Hin1II CATG 4 cut(s) 392, 628, 866, 980
HincII GTYRAC 1 cut(s) 403
HindII GTYRAC 1 cut(s) 403
HinfI GANTC 7 cut(s) 456, 709, 759, 882, 923, 999, 1030
HpaII CCGG 5 cut(s) 6, 1121, 1208, 1233, 1282
HphI GGTGA 2 cut(s) 148, 250
Hpy166II GTNNAC 8 cut(s) 62, 139, 403, 472, 970, 1051, 1303, 1312
Hpy188I TCNGA 5 cut(s) 433, 700, 928, 1071, 1226
Hpy188III TCNNGA 6 cut(s) 74, 283, 763, 782, 1034, 1252
Hpy8I GTNNAC 8 cut(s) 62, 139, 403, 472, 970, 1051, 1303, 1312
Hpy99I CGWCG 1 cut(s) 410
HpyAV CCTTC 8 cut(s) 320, 339, 760, 800, 904, 933, 1066, 1162
HpyCH4III ACNGT 2 cut(s) 610, 890
HpyCH4IV ACGT 6 cut(s) 234, 354, 532, 644, 795, 1145
HpyCH4V TGCA 9 cut(s) 211, 257, 472, 540, 560, 635, 955, 976, 986
HpyF10VI GCNNNNNNNGC 1 cut(s) 638
HpyF3I CTNAG 1 cut(s) 35
HpySE526I ACGT 6 cut(s) 234, 354, 532, 644, 795, 1145
Hsp92I GRCGYC 1 cut(s) 1230
Hsp92II CATG 4 cut(s) 392, 628, 866, 980
Kzo9I GATC 9 cut(s) 82, 279, 443, 460, 544, 691, 1036, 1063, 1176
LmnI GCTCC 3 cut(s) 122, 329, 1254
Lsp1109I GCAGC 3 cut(s) 269, 544, 619
MaeI CTAG 5 cut(s) 65, 554, 575, 746, 1125
MaeII ACGT 6 cut(s) 234, 354, 532, 644, 795, 1145
MaeIII GTNAC 7 cut(s) 218, 313, 610, 617, 668, 715, 805
MalI GATC 9 cut(s) 84, 281, 445, 462, 546, 693, 1038, 1065, 1178
MboI GATC 9 cut(s) 82, 279, 443, 460, 544, 691, 1036, 1063, 1176
MboII GAAGA 6 cut(s) 56, 166, 590, 605, 1058, 1132
MfeI CAATTG 1 cut(s) 723
MhlI GDGCHC 2 cut(s) 474, 1251
MluCI AATT 4 cut(s) 723, 833, 1019, 1159
MlyI GAGTC 1 cut(s) 450
MmeI TCCRAC 2 cut(s) 847, 1204
MroXI GAANNNNTTC 1 cut(s) 789
MseI TTAA 4 cut(s) 179, 564, 647, 1017
MspI CCGG 5 cut(s) 6, 1121, 1208, 1233, 1282
MspR9I CCNGG 2 cut(s) 1269, 1282
MunI CAATTG 1 cut(s) 723
MvaI CCWGG 1 cut(s) 1269
MwoI GCNNNNNNNGC 1 cut(s) 638
NciI CCSGG 1 cut(s) 1282
NdeII GATC 9 cut(s) 82, 279, 443, 460, 544, 691, 1036, 1063, 1176
NheI GCTAGC 1 cut(s) 1124
NlaIII CATG 4 cut(s) 392, 628, 866, 980
NlaIV GGNNCC 6 cut(s) 124, 331, 376, 1250, 1266, 1279
NmuCI GTSAC 4 cut(s) 610, 617, 715, 805
PcsI WCGNNNNNNNCGW 1 cut(s) 1008
PdmI GAANNNNTTC 1 cut(s) 789
PfeI GAWTC 6 cut(s) 709, 759, 882, 923, 999, 1030
PflMI CCANNNNNTGG 1 cut(s) 1258
PkrI GCNGC 5 cut(s) 41, 259, 559, 634, 1184
Ple19I CGATCG 2 cut(s) 282, 1179
PleI GAGTC 1 cut(s) 450
PpsI GAGTC 1 cut(s) 450
Ppu21I YACGTR 2 cut(s) 235, 533
PpuMI RGGWCCY 1 cut(s) 1264
Psp1406I AACGTT 1 cut(s) 644
Psp5II RGGWCCY 1 cut(s) 1264
Psp6I CCWGG 1 cut(s) 1267
PspEI GGTNACC 1 cut(s) 218
PspGI CCWGG 1 cut(s) 1267
PspN4I GGNNCC 6 cut(s) 124, 331, 376, 1250, 1266, 1279
PspPI GGNCC 2 cut(s) 1264, 1303
PspPPI RGGWCCY 1 cut(s) 1264
PstNI CAGNNNCTG 1 cut(s) 431
PvuI CGATCG 2 cut(s) 282, 1179
RsaI GTAC 3 cut(s) 233, 387, 573
RsaNI GTAC 3 cut(s) 232, 386, 572
SaqAI TTAA 4 cut(s) 179, 564, 647, 1017
SatI GCNGC 5 cut(s) 40, 258, 558, 633, 1183
Sau3AI GATC 9 cut(s) 82, 279, 443, 460, 544, 691, 1036, 1063, 1176
Sau96I GGNCC 2 cut(s) 1264, 1303
ScaI AGTACT 1 cut(s) 573
SchI GAGTC 1 cut(s) 450
ScrFI CCNGG 2 cut(s) 1269, 1282
SduI GDGCHC 2 cut(s) 474, 1251
SgrAI CRCCGGYG 1 cut(s) 1232
SinI GGWCC 2 cut(s) 1264, 1303
SmlI CTYRAG 1 cut(s) 893
SmoI CTYRAG 1 cut(s) 893
SnaBI TACGTA 1 cut(s) 533
Sse9I AATT 4 cut(s) 723, 833, 1019, 1159
SsiI CCGC 7 cut(s) 39, 88, 119, 311, 1093, 1182, 1298
SspMI CTAG 5 cut(s) 65, 554, 575, 746, 1125
StyD4I CCNGG 2 cut(s) 1267, 1280
StyI CCWWGG 1 cut(s) 475
TaaI ACNGT 2 cut(s) 610, 890
TaiI ACGT 6 cut(s) 237, 357, 535, 647, 798, 1148
TasI AATT 4 cut(s) 723, 833, 1019, 1159
TatI WGTACW 1 cut(s) 571
TauI GCSGC 2 cut(s) 42, 1185
TfiI GAWTC 6 cut(s) 709, 759, 882, 923, 999, 1030
Tru1I TTAA 4 cut(s) 179, 564, 647, 1017
Tru9I TTAA 4 cut(s) 179, 564, 647, 1017
TscAI CASTG 2 cut(s) 619, 1050
TseFI GTSAC 4 cut(s) 610, 617, 715, 805
TseI GCWGC 3 cut(s) 257, 557, 632
Tsp45I GTSAC 4 cut(s) 610, 617, 715, 805
TspDTI ATGAA 3 cut(s) 339, 606, 851
TspGWI ACGGA 2 cut(s) 468, 687
TspRI CASTG 2 cut(s) 619, 1050
Van91I CCANNNNNTGG 1 cut(s) 1258
VneI GTGCAC 1 cut(s) 470
VpaK11BI GGWCC 2 cut(s) 1264, 1303
XmiI GTMKAC 1 cut(s) 61
XmnI GAANNNNTTC 1 cut(s) 789
XspI CTAG 5 cut(s) 65, 554, 575, 746, 1125
ZrmI AGTACT 1 cut(s) 573
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.