Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0002154

Physical Location & Seq

Genomic Coordinates Forward (+)

6813699 .. 6815775

Gene Structure 2077 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G062700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1164 bp

ATGGGTAGCTTGATTGCAGCCAGGTGGAGGGTTCTGAGTGGCGAGGACGAGTGGGAGGGTCTGCTAGACCCTCTAGACATCAATCTTCGCCGCTACATCATTCACTACGGTGAAAGGGCTGGAGCCATTGGTTACGGATTCATTGACAAGCCAACATCAATTTCGAAGAACATCGGACTTCCCCGGTATGCCAAGAGAAATTTATTCTCTAAGGTGGGTTTGGAGACAGGCAATCCATACAAGTACGAGGTGAAGAAGTATTTGTATGCAGCAACAAGATTTGCACCTGGGAAATCAAGCTTGTTGGGATTTGTTGCGGTGTCGACGGATGAAGGAAGCAAAGTGTTAGGAAGGAGGGACATTCTGATTTCATGGAGAGGAACCATGTTGGACCAAGAGTTAGAGGTCGACGCTACGATACTTTTTTTCTCAGCTTCTGATATTCTGGGAAAGGAACATAATCCTCAGGTGCACCTTGGTTGGCATGGCTATTATACTAATCTTGACTCTGAGTCAGCACACAATAAAACTGCTAGTTGCAGAGATCAGGTTCTAGCTGCAGTTAGAGAACTAGTAGACGAATACAAGGAAGAGGAGATCAGCATTACTGTCACTGGCCACAGCATGGGTTCAGCTATTGCAGTTCTAAATGCAACTGATATTGTTTATAACGGATACAATAAGCCTACAAACTCAAACAATGTGAGTCTTGTCACAGCCATTGTGTTTGCCTGCCCAAATGTGGGAGACCAAGGTTTCAAGAAGGTATTCTCTAGTCTCGAAAATCTTCGGGTCTTGCGTATCACCAACGAATGGGATCCCGTCCCTAAGTTACCAATTCTACCTTATGTCCCTGTTGGAAAAGAGTTGGTAATCGACACTCTCAAATCGCCCTACTTGAAGAATGCAATAGACTCTGTGCATCAGTTGGAGGTTTACTTGCATGGAGTGGCAGGAACACAAGGGAGAAACAATGATTTTAAATTGGAAATTAATCGAGATCTTGCATTGGTGAACAGAATTTTGGATGGTCTAGATGATAAATATCATATAATTCCTAAGTGGTGGATAGAGAGGAACAACTCTATGGTTCAAATGGAGGACGGCTCCTGGGAGTTAATGGATCATGAGAAAGATGACGATGATGACGATGATGGAGCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004620 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006629 GO:0006638 GO:0006639 GO:0008150 GO:0008152 GO:0008970 GO:0009056 GO:0009987 GO:0010029 GO:0010187 GO:0010876 GO:0016042 GO:0016298 GO:0016787 GO:0016788 GO:0019915 GO:0033036 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044424 GO:0044464 GO:0046339 GO:0046340 GO:0046461 GO:0046462 GO:0046464 GO:0046486 GO:0046503 GO:0047372 GO:0048519 GO:0048580 GO:0048581 GO:0050789 GO:0050793 GO:0051093 GO:0051179 GO:0051235 GO:0051239 GO:0051241 GO:0052651 GO:0052689 GO:0065007 GO:0065008 GO:0071704 GO:1900140 GO:1901575 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Lipase_3

Protein Analysis

388

Amino Acids

43.45

Weight (kDa)

5.23

Isoelectric Point (pI)

30.06

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002154)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g19750 FvH4_5g19760
malus_domestica	MD04G1058700.v1.1
prunus_persica	Prupe.5G062500_v2.0.a1 Prupe.5G062600_v2.0.a1 Prupe.5G062700_v2.0.a1
pyrus_communis	pycom04g05260
rosa_chinensis	RchiOBHm_Chr7g0203651 RchiOBHm_Chr7g0203681 RchiOBHm_Chr7g0204521 RchiOBHm_Chr7g0204541
rosa_laevigata	RLG00000003452 RLG00000003453 RLG00000003512
rosa_multiflora	Rmu_co8274427.1_g000001 Rmu_co8340383.1_g000001 Rmu_sc0005354.1_g000007 Rmu_ssc0000443.1_g000023 Rmu_ssc0000443.1_g000033
rosa_roxburghii	Rroxscaffold_3G00253010 Rroxscaffold_3G00253020 Rroxscaffold_3G00253540 Rroxscaffold_3G00253610 Rroxscaffold_6G00397050 Rroxscaffold_6G00397100
rosa_rugosa	Rorug07G0078000 Rorug07G0084900 Rorug07G0085000
rosa_samantha	Rh7AG207600 Rh7AG214200 Rh7AG214300 Rh7BG206900 Rh7BG211700 Rh7BG211800 Rh7CG219900 Rh7CG227300 Rh7DG214500 Rh7DG214700 Rh7DG221800 Rh7DG222000
rosa_wichuraiana	Rw7G018100 Rw7G018570 Rw7G018580 Rw7G018590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	669
AccB7I	CCANNNNNTGG	2 cut(s)	625, 813
AccI	GTMKAC	3 cut(s)	323, 408, 576
AciI	CCGC	2 cut(s)	91, 317
AclWI	GGATC	3 cut(s)	812, 825, 1131
AcoI	YGGCCR	1 cut(s)	616
AcsI	RAATTY	2 cut(s)	199, 1020
AfaI	GTAC	1 cut(s)	245
AfiI	CCNNNNNNNGG	5 cut(s)	27, 625, 742, 743, 813
AgsI	TTSAA	3 cut(s)	760, 901, 1094
AhdI	GACNNNNNGTC	1 cut(s)	511
AhlI	ACTAGT	1 cut(s)	571
AjnI	CCWGG	3 cut(s)	20, 286, 1109
AjuI	GAANNNNNNNTTGG	4 cut(s)	145, 177, 1007, 1039
AleI	CACNNNNGTG	1 cut(s)	108
AluBI	AGCT	5 cut(s)	9, 300, 434, 557, 635
AluI	AGCT	5 cut(s)	9, 300, 434, 557, 635
Alw21I	GWGCWC	1 cut(s)	474
Alw26I	GTCTC	3 cut(s)	218, 741, 782
Alw44I	GTGCAC	1 cut(s)	470
AlwI	GGATC	3 cut(s)	812, 825, 1131
AlwNI	CAGNNNCTG	1 cut(s)	437
AoxI	GGCC	1 cut(s)	616
ApaLI	GTGCAC	1 cut(s)	470
ApeKI	GCWGC	3 cut(s)	17, 269, 557
ApoI	RAATTY	2 cut(s)	199, 1020
AseI	ATTAAT	1 cut(s)	993
Asp700I	GAANNNNTTC	2 cut(s)	767, 786
AspS9I	GGNCC	1 cut(s)	391
AsuC2I	CCSGG	1 cut(s)	184
AsuHPI	GGTGA	4 cut(s)	122, 262, 796, 1024
AsuII	TTCGAA	1 cut(s)	164
AvaII	GGWCC	1 cut(s)	391
AxyI	CCTNAGG	1 cut(s)	465
BaeGI	GKGCMC	1 cut(s)	474
BalI	TGGCCA	1 cut(s)	618
BamHI	GGATCC	1 cut(s)	817
Bbv12I	GWGCWC	1 cut(s)	474
BbvI	GCAGC	3 cut(s)	29, 281, 544
BccI	CCATC	2 cut(s)	1022, 1148
BceAI	ACGGC	1 cut(s)	1120
BciT130I	CCWGG	3 cut(s)	22, 288, 1111
BciVI	GTATCC	1 cut(s)	668
BcnI	CCSGG	1 cut(s)	184
BcoDI	GTCTC	3 cut(s)	218, 741, 782
BcuI	ACTAGT	1 cut(s)	571
BfaI	CTAG	8 cut(s)	65, 74, 534, 554, 572, 774, 1034, 1162
BfmI	CTRYAG	1 cut(s)	558
BfuI	GTATCC	1 cut(s)	668
BglII	AGATCT	1 cut(s)	1000
BisI	GCNGC	4 cut(s)	18, 91, 270, 558
BlsI	GCNGC	4 cut(s)	19, 92, 271, 559
Bme1390I	CCNGG	4 cut(s)	22, 184, 288, 1111
Bme18I	GGWCC	1 cut(s)	391
BmeRI	GACNNNNNGTC	1 cut(s)	511
BmgT120I	GGNCC	1 cut(s)	391
BmiI	GGNNCC	5 cut(s)	124, 382, 819, 1108, 1159
BmrFI	CCNGG	4 cut(s)	22, 184, 288, 1111
BmsI	GCATC	1 cut(s)	931
BplI	GAGNNNNNCTC	2 cut(s)	1091, 1123
BpmI	CTGGAG	1 cut(s)	141
Bpu14I	TTCGAA	1 cut(s)	164
BpuMI	CCSGG	1 cut(s)	184
BsaBI	GATNNNNATC	1 cut(s)	1044
BsaI	GGTCTC	1 cut(s)	741
BsaJI	CCNNGG	5 cut(s)	182, 287, 475, 751, 1110
Bsc4I	CCNNNNNNNGG	5 cut(s)	27, 625, 742, 743, 813
Bse1I	ACTGG	1 cut(s)	619
Bse21I	CCTNAGG	1 cut(s)	465
Bse8I	GATNNNNATC	1 cut(s)	1044
BseBI	CCWGG	3 cut(s)	22, 288, 1111
BseDI	CCNNGG	5 cut(s)	182, 287, 475, 751, 1110
BseGI	GGATG	2 cut(s)	334, 1033
BseJI	GATNNNNATC	1 cut(s)	1044
BseLI	CCNNNNNNNGG	5 cut(s)	27, 625, 742, 743, 813
BseMII	CTCAG	4 cut(s)	26, 444, 479, 501
BseNI	ACTGG	1 cut(s)	619
BseRI	GAGGAG	1 cut(s)	608
BseSI	GKGCMC	1 cut(s)	474
BseXI	GCAGC	3 cut(s)	29, 281, 544
BshFI	GGCC	1 cut(s)	618
BsiHKAI	GWGCWC	1 cut(s)	474
BsiSI	CCGG	1 cut(s)	184
BslFI	GGGAC	3 cut(s)	371, 809, 836
BslI	CCNNNNNNNGG	5 cut(s)	27, 625, 742, 743, 813
BsmAI	GTCTC	3 cut(s)	218, 741, 782
BsmFI	GGGAC	3 cut(s)	371, 809, 836
BsmI	GAATGC	1 cut(s)	910
BsnI	GGCC	1 cut(s)	618
Bso31I	GGTCTC	1 cut(s)	741
Bsp119I	TTCGAA	1 cut(s)	164
Bsp1286I	GDGCHC	1 cut(s)	474
Bsp143I	GATC	5 cut(s)	544, 597, 817, 1000, 1123
BspACI	CCGC	2 cut(s)	91, 317
BspANI	GGCC	1 cut(s)	618
BspCNI	CTCAG	4 cut(s)	27, 443, 478, 502
BspHI	TCATGA	1 cut(s)	1126
BspLI	GGNNCC	5 cut(s)	124, 382, 819, 1108, 1159
BspMAI	CTGCAG	1 cut(s)	562
BspPI	GGATC	3 cut(s)	812, 825, 1131
BspT104I	TTCGAA	1 cut(s)	164
BspTNI	GGTCTC	1 cut(s)	741
BsrI	ACTGG	1 cut(s)	619
BssECI	CCNNGG	5 cut(s)	182, 287, 475, 751, 1110
BssMI	GATC	5 cut(s)	544, 597, 817, 1000, 1123
BssT1I	CCWWGG	2 cut(s)	475, 751
Bst2UI	CCWGG	3 cut(s)	22, 288, 1111
Bst4CI	ACNGT	2 cut(s)	110, 610
Bst6I	CTCTTC	1 cut(s)	585
BstBI	TTCGAA	1 cut(s)	164
BstC8I	GCNNGC	1 cut(s)	733
BstDEI	CTNAG	7 cut(s)	35, 210, 430, 465, 510, 828, 1059
BstF5I	GGATG	2 cut(s)	334, 1033
BstKTI	GATC	5 cut(s)	547, 600, 820, 1003, 1126
BstMAI	GTCTC	3 cut(s)	218, 741, 782
BstMBI	GATC	5 cut(s)	544, 597, 817, 1000, 1123
BstNI	CCWGG	3 cut(s)	22, 288, 1111
BstSCI	CCNGG	4 cut(s)	20, 182, 286, 1109
BstSFI	CTRYAG	1 cut(s)	558
BstSLI	GKGCMC	1 cut(s)	474
BstV1I	GCAGC	3 cut(s)	29, 281, 544
BstX2I	RGATCY	2 cut(s)	817, 1000
BstYI	RGATCY	2 cut(s)	817, 1000
Bsu36I	CCTNAGG	1 cut(s)	465
BsuI	GTATCC	1 cut(s)	668
BsuRI	GGCC	1 cut(s)	618
BtsCI	GGATG	2 cut(s)	334, 1033
BtsIMutI	CAGTG	1 cut(s)	612
Cac8I	GCNNGC	1 cut(s)	733
CaiI	CAGNNNCTG	1 cut(s)	437
CciI	TCATGA	1 cut(s)	1126
Cfr13I	GGNCC	1 cut(s)	391
CseI	GACGC	1 cut(s)	419
Csp6I	GTAC	1 cut(s)	244
CviAII	CATG	6 cut(s)	372, 385, 485, 625, 944, 1127
CviQI	GTAC	1 cut(s)	244
DdeI	CTNAG	7 cut(s)	35, 210, 430, 465, 510, 828, 1059
DpnI	GATC	5 cut(s)	546, 599, 819, 1002, 1125
DpnII	GATC	5 cut(s)	544, 597, 817, 1000, 1123
DraI	TTTAAA	1 cut(s)	982
DriI	GACNNNNNGTC	1 cut(s)	511
EaeI	YGGCCR	1 cut(s)	616
Eam1104I	CTCTTC	1 cut(s)	585
Eam1105I	GACNNNNNGTC	1 cut(s)	511
EarI	CTCTTC	1 cut(s)	585
Eco130I	CCWWGG	2 cut(s)	475, 751
Eco31I	GGTCTC	1 cut(s)	741
Eco47I	GGWCC	1 cut(s)	391
Eco81I	CCTNAGG	1 cut(s)	465
EcoRII	CCWGG	3 cut(s)	20, 286, 1109
EcoT14I	CCWWGG	2 cut(s)	475, 751
ErhI	CCWWGG	2 cut(s)	475, 751
FaeI	CATG	6 cut(s)	375, 388, 488, 628, 947, 1130
FaqI	GGGAC	3 cut(s)	371, 809, 836
FatI	CATG	6 cut(s)	371, 384, 484, 624, 943, 1126
FblI	GTMKAC	3 cut(s)	323, 408, 576
Fnu4HI	GCNGC	4 cut(s)	18, 91, 270, 558
FokI	GGATG	2 cut(s)	341, 1040
Fsp4HI	GCNGC	4 cut(s)	18, 91, 270, 558
FspBI	CTAG	8 cut(s)	65, 74, 534, 554, 572, 774, 1034, 1162
GluI	GCNGC	4 cut(s)	18, 91, 270, 558
GsuI	CTGGAG	1 cut(s)	141
HaeIII	GGCC	1 cut(s)	618
HapII	CCGG	1 cut(s)	184
HgaI	GACGC	1 cut(s)	419
Hin1II	CATG	6 cut(s)	375, 388, 488, 628, 947, 1130
HincII	GTYRAC	2 cut(s)	324, 409
HindII	GTYRAC	2 cut(s)	324, 409
HindIII	AAGCTT	1 cut(s)	298
HinfI	GANTC	5 cut(s)	138, 506, 512, 706, 914
HpaII	CCGG	1 cut(s)	184
HphI	GGTGA	4 cut(s)	122, 262, 796, 1024
Hpy166II	GTNNAC	6 cut(s)	324, 409, 472, 577, 937, 1015
Hpy188I	TCNGA	5 cut(s)	36, 176, 366, 439, 511
Hpy188III	TCNNGA	7 cut(s)	74, 503, 760, 779, 998, 1034, 1127
Hpy8I	GTNNAC	6 cut(s)	324, 409, 472, 577, 937, 1015
Hpy99I	CGWCG	2 cut(s)	328, 413
HpyAV	CCTTC	3 cut(s)	326, 345, 757
HpyCH4III	ACNGT	2 cut(s)	110, 610
HpyF3I	CTNAG	7 cut(s)	35, 210, 430, 465, 510, 828, 1059
Hsp92II	CATG	6 cut(s)	375, 388, 488, 628, 947, 1130
Kzo9I	GATC	5 cut(s)	544, 597, 817, 1000, 1123
LmnI	GCTCC	3 cut(s)	122, 1112, 1157
Lsp1109I	GCAGC	3 cut(s)	29, 281, 544
LweI	GCATC	1 cut(s)	931
MaeI	CTAG	8 cut(s)	65, 74, 534, 554, 572, 774, 1034, 1162
MaeIII	GTNAC	4 cut(s)	131, 610, 712, 831
MalI	GATC	5 cut(s)	546, 599, 819, 1002, 1125
MboI	GATC	5 cut(s)	544, 597, 817, 1000, 1123
MboII	GAAGA	6 cut(s)	77, 178, 265, 602, 779, 913
MflI	RGATCY	2 cut(s)	817, 1000
MhlI	GDGCHC	1 cut(s)	474
MlsI	TGGCCA	1 cut(s)	618
MluCI	AATT	7 cut(s)	159, 199, 837, 983, 990, 1020, 1053
MluNI	TGGCCA	1 cut(s)	618
MlyI	GAGTC	4 cut(s)	500, 521, 715, 908
MmeI	TCCRAC	3 cut(s)	369, 838, 909
Mox20I	TGGCCA	1 cut(s)	618
MroXI	GAANNNNTTC	2 cut(s)	767, 786
MscI	TGGCCA	1 cut(s)	618
MseI	TTAA	3 cut(s)	981, 993, 1118
MslI	CAYNNNNRTG	1 cut(s)	108
Msp20I	TGGCCA	1 cut(s)	618
MspI	CCGG	1 cut(s)	184
MspR9I	CCNGG	4 cut(s)	22, 184, 288, 1111
Mva1269I	GAATGC	1 cut(s)	910
MvaI	CCWGG	3 cut(s)	22, 288, 1111
NciI	CCSGG	1 cut(s)	184
NdeII	GATC	5 cut(s)	544, 597, 817, 1000, 1123
NlaIII	CATG	6 cut(s)	375, 388, 488, 628, 947, 1130
NlaIV	GGNNCC	5 cut(s)	124, 382, 819, 1108, 1159
NmuCI	GTSAC	2 cut(s)	610, 712
NspV	TTCGAA	1 cut(s)	164
OliI	CACNNNNGTG	1 cut(s)	108
PagI	TCATGA	1 cut(s)	1126
PcsI	WCGNNNNNNNCGW	2 cut(s)	796, 1146
PctI	GAATGC	1 cut(s)	910
PdmI	GAANNNNTTC	2 cut(s)	767, 786
PfeI	GAWTC	1 cut(s)	138
PflMI	CCANNNNNTGG	2 cut(s)	625, 813
PkrI	GCNGC	4 cut(s)	19, 92, 271, 559
PleI	GAGTC	4 cut(s)	500, 520, 714, 908
PpsI	GAGTC	4 cut(s)	500, 520, 714, 908
PshBI	ATTAAT	1 cut(s)	993
PsiI	TTATAA	1 cut(s)	669
Psp6I	CCWGG	3 cut(s)	20, 286, 1109
PspGI	CCWGG	3 cut(s)	20, 286, 1109
PspN4I	GGNNCC	5 cut(s)	124, 382, 819, 1108, 1159
PspPI	GGNCC	1 cut(s)	391
PstI	CTGCAG	1 cut(s)	562
PstNI	CAGNNNCTG	1 cut(s)	437
PsuI	RGATCY	2 cut(s)	817, 1000
RsaI	GTAC	1 cut(s)	245
RsaNI	GTAC	1 cut(s)	244
RseI	CAYNNNNRTG	1 cut(s)	108
SalI	GTCGAC	2 cut(s)	322, 407
SaqAI	TTAA	3 cut(s)	981, 993, 1118
SatI	GCNGC	4 cut(s)	18, 91, 270, 558
Sau3AI	GATC	5 cut(s)	544, 597, 817, 1000, 1123
Sau96I	GGNCC	1 cut(s)	391
SchI	GAGTC	4 cut(s)	500, 521, 715, 908
ScrFI	CCNGG	4 cut(s)	22, 184, 288, 1111
SduI	GDGCHC	1 cut(s)	474
SfaNI	GCATC	1 cut(s)	931
SfcI	CTRYAG	1 cut(s)	558
SfuI	TTCGAA	1 cut(s)	164
SinI	GGWCC	1 cut(s)	391
SmiMI	CAYNNNNRTG	1 cut(s)	108
SpeI	ACTAGT	1 cut(s)	571
Sse9I	AATT	7 cut(s)	159, 199, 837, 983, 990, 1020, 1053
SsiI	CCGC	2 cut(s)	91, 317
SspMI	CTAG	8 cut(s)	65, 74, 534, 554, 572, 774, 1034, 1162
StyD4I	CCNGG	4 cut(s)	20, 182, 286, 1109
StyI	CCWWGG	2 cut(s)	475, 751
TaaI	ACNGT	2 cut(s)	110, 610
TaqI	TCGA	6 cut(s)	164, 323, 408, 780, 876, 997
TasI	AATT	7 cut(s)	159, 199, 837, 983, 990, 1020, 1053
TauI	GCSGC	1 cut(s)	93
TfiI	GAWTC	1 cut(s)	138
Tru1I	TTAA	3 cut(s)	981, 993, 1118
Tru9I	TTAA	3 cut(s)	981, 993, 1118
TscAI	CASTG	1 cut(s)	619
TseFI	GTSAC	2 cut(s)	610, 712
TseI	GCWGC	3 cut(s)	17, 269, 557
Tsp45I	GTSAC	2 cut(s)	610, 712
TspDTI	ATGAA	3 cut(s)	130, 345, 360
TspGWI	ACGGA	3 cut(s)	150, 341, 687
TspRI	CASTG	1 cut(s)	619
Van91I	CCANNNNNTGG	2 cut(s)	625, 813
VneI	GTGCAC	1 cut(s)	470
VpaK11BI	GGWCC	1 cut(s)	391
VspI	ATTAAT	1 cut(s)	993
XapI	RAATTY	2 cut(s)	199, 1020
XbaI	TCTAGA	2 cut(s)	73, 1033
XmiI	GTMKAC	3 cut(s)	323, 408, 576
XmnI	GAANNNNTTC	2 cut(s)	767, 786
XspI	CTAG	8 cut(s)	65, 74, 534, 554, 572, 774, 1034, 1162

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.