Brf1-like TBP-binding domain
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 304 |
| Acc36I | ACCTGC | 1 cut(s) | 304 |
| Acc65I | GGTACC | 1 cut(s) | 60 |
| AccB1I | GGYRCC | 1 cut(s) | 60 |
| AciI | CCGC | 1 cut(s) | 80 |
| AcoI | YGGCCR | 1 cut(s) | 159 |
| AcsI | RAATTY | 1 cut(s) | 245 |
| AcuI | CTGAAG | 1 cut(s) | 387 |
| AfaI | GTAC | 1 cut(s) | 62 |
| AgsI | TTSAA | 5 cut(s) | 16, 91, 243, 250, 470 |
| AluBI | AGCT | 4 cut(s) | 152, 170, 260, 283 |
| AluI | AGCT | 4 cut(s) | 152, 170, 260, 283 |
| AoxI | GGCC | 1 cut(s) | 159 |
| ApeKI | GCWGC | 1 cut(s) | 170 |
| ApoI | RAATTY | 1 cut(s) | 245 |
| Asp718I | GGTACC | 1 cut(s) | 60 |
| AsuHPI | GGTGA | 2 cut(s) | 35, 350 |
| BalI | TGGCCA | 1 cut(s) | 161 |
| BanI | GGYRCC | 1 cut(s) | 60 |
| BbvI | GCAGC | 1 cut(s) | 157 |
| BccI | CCATC | 1 cut(s) | 211 |
| BciVI | GTATCC | 2 cut(s) | 214, 416 |
| BfaI | CTAG | 1 cut(s) | 153 |
| BfuAI | ACCTGC | 1 cut(s) | 304 |
| BfuI | GTATCC | 2 cut(s) | 214, 416 |
| BisI | GCNGC | 2 cut(s) | 81, 171 |
| BlsI | GCNGC | 2 cut(s) | 82, 172 |
| BmiI | GGNNCC | 1 cut(s) | 62 |
| Bse3DI | GCAATG | 1 cut(s) | 117 |
| BseMI | GCAATG | 1 cut(s) | 117 |
| BseMII | CTCAG | 1 cut(s) | 227 |
| BseXI | GCAGC | 1 cut(s) | 157 |
| BshFI | GGCC | 1 cut(s) | 161 |
| BshNI | GGYRCC | 1 cut(s) | 60 |
| BsmI | GAATGC | 2 cut(s) | 446, 464 |
| BsnI | GGCC | 1 cut(s) | 161 |
| BspACI | CCGC | 1 cut(s) | 80 |
| BspANI | GGCC | 1 cut(s) | 161 |
| BspCNI | CTCAG | 1 cut(s) | 228 |
| BspLI | GGNNCC | 1 cut(s) | 62 |
| BspMI | ACCTGC | 1 cut(s) | 304 |
| BspQI | GCTCTTC | 1 cut(s) | 273 |
| BspT107I | GGYRCC | 1 cut(s) | 60 |
| BsrDI | GCAATG | 1 cut(s) | 117 |
| Bst4CI | ACNGT | 4 cut(s) | 52, 87, 214, 351 |
| Bst6I | CTCTTC | 1 cut(s) | 273 |
| BstC8I | GCNNGC | 2 cut(s) | 74, 78 |
| BstDEI | CTNAG | 2 cut(s) | 225, 236 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 158, 167, 176 |
| BstV1I | GCAGC | 1 cut(s) | 157 |
| BsuI | GTATCC | 2 cut(s) | 214, 416 |
| BsuRI | GGCC | 1 cut(s) | 161 |
| BtsIMutI | CAGTG | 1 cut(s) | 83 |
| BveI | ACCTGC | 1 cut(s) | 304 |
| Cac8I | GCNNGC | 2 cut(s) | 74, 78 |
| Csp6I | GTAC | 1 cut(s) | 61 |
| CviQI | GTAC | 1 cut(s) | 61 |
| DdeI | CTNAG | 2 cut(s) | 225, 236 |
| EaeI | YGGCCR | 1 cut(s) | 159 |
| Eam1104I | CTCTTC | 1 cut(s) | 273 |
| EarI | CTCTTC | 1 cut(s) | 273 |
| Eco57I | CTGAAG | 1 cut(s) | 387 |
| FaiI | YATR | 9 cut(s) | 126, 255, 291, 344, 397, 399, 417, 432, 450 |
| FauNDI | CATATG | 1 cut(s) | 397 |
| Fnu4HI | GCNGC | 2 cut(s) | 81, 171 |
| Fsp4HI | GCNGC | 2 cut(s) | 81, 171 |
| FspBI | CTAG | 1 cut(s) | 153 |
| GluI | GCNGC | 2 cut(s) | 81, 171 |
| HaeIII | GGCC | 1 cut(s) | 161 |
| HindIII | AAGCTT | 1 cut(s) | 258 |
| HinfI | GANTC | 1 cut(s) | 392 |
| HphI | GGTGA | 2 cut(s) | 35, 350 |
| HpyAV | CCTTC | 1 cut(s) | 302 |
| HpyCH4III | ACNGT | 4 cut(s) | 52, 87, 214, 351 |
| HpyCH4V | TGCA | 5 cut(s) | 293, 299, 346, 404, 444 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 158, 167, 176 |
| HpyF3I | CTNAG | 2 cut(s) | 225, 236 |
| KpnI | GGTACC | 1 cut(s) | 64 |
| LguI | GCTCTTC | 1 cut(s) | 273 |
| LmnI | GCTCC | 1 cut(s) | 178 |
| LpnPI | CCDG | 7 cut(s) | 35, 47, 62, 189, 201, 309, 385 |
| Lsp1109I | GCAGC | 1 cut(s) | 157 |
| MaeI | CTAG | 1 cut(s) | 153 |
| MboII | GAAGA | 3 cut(s) | 153, 290, 482 |
| MlsI | TGGCCA | 1 cut(s) | 161 |
| MluCI | AATT | 5 cut(s) | 245, 322, 427, 445, 473 |
| MluNI | TGGCCA | 1 cut(s) | 161 |
| MnlI | CCTC | 2 cut(s) | 298, 448 |
| Mox20I | TGGCCA | 1 cut(s) | 161 |
| MscI | TGGCCA | 1 cut(s) | 161 |
| MseI | TTAA | 3 cut(s) | 66, 272, 481 |
| Msp20I | TGGCCA | 1 cut(s) | 161 |
| Mva1269I | GAATGC | 2 cut(s) | 446, 464 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 158, 167, 176 |
| NdeI | CATATG | 1 cut(s) | 397 |
| NlaIV | GGNNCC | 1 cut(s) | 62 |
| PaqCI | CACCTGC | 1 cut(s) | 304 |
| PciSI | GCTCTTC | 1 cut(s) | 273 |
| PctI | GAATGC | 2 cut(s) | 446, 464 |
| PfeI | GAWTC | 1 cut(s) | 392 |
| PkrI | GCNGC | 2 cut(s) | 82, 172 |
| PspN4I | GGNNCC | 1 cut(s) | 62 |
| RsaI | GTAC | 1 cut(s) | 62 |
| RsaNI | GTAC | 1 cut(s) | 61 |
| SapI | GCTCTTC | 1 cut(s) | 273 |
| SaqAI | TTAA | 3 cut(s) | 66, 272, 481 |
| SatI | GCNGC | 2 cut(s) | 81, 171 |
| SetI | ASST | 6 cut(s) | 66, 154, 172, 262, 285, 298 |
| Sse9I | AATT | 5 cut(s) | 245, 322, 427, 445, 473 |
| SsiI | CCGC | 1 cut(s) | 80 |
| SspMI | CTAG | 1 cut(s) | 153 |
| TaaI | ACNGT | 4 cut(s) | 52, 87, 214, 351 |
| TasI | AATT | 5 cut(s) | 245, 322, 427, 445, 473 |
| TauI | GCSGC | 1 cut(s) | 83 |
| TfiI | GAWTC | 1 cut(s) | 392 |
| Tru1I | TTAA | 3 cut(s) | 66, 272, 481 |
| Tru9I | TTAA | 3 cut(s) | 66, 272, 481 |
| TscAI | CASTG | 1 cut(s) | 90 |
| TseI | GCWGC | 1 cut(s) | 170 |
| TspDTI | ATGAA | 6 cut(s) | 128, 270, 291, 372, 384, 453 |
| TspRI | CASTG | 1 cut(s) | 90 |
| XapI | RAATTY | 1 cut(s) | 245 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 53 |
| XspI | CTAG | 1 cut(s) | 153 |