Rorug06G0308000

dTDP-glucose 4,6-dehydratase activity

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Forward (+)
45996141 .. 46002845
6705 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0308000.1

Sequence Viewer

Length: 2178 bp
ATGATGGGTACTGACTTGCACCATGTGCTGAGAAGCCTCTGTTTCAATACGGAGTGGAACTACGCCATTTTCTGGAAACTGAAGCATCGGGCTCGAATGGTGCTGACTTGGGAGGACGCTTACTATGACAACTGTGAGCAACATGATAATTCAGGGAATAGATGCTTTATTAAGACACTGGAGGCATTGCATGGCAGCCATTATCCACATGATCCCCTTGGGCTAGCCGTGGCAAAAATGTCGTATCATGTATATACTCTGGGAGAAGGGATTGTCGGACAAGTGGCAGTTACTGGGAAGCATCAGTGGATCTTTGCAGATGATATTTTGAAGAATAACTGTTCACCGTCTGAGTACTGTGATGGATGGCAAAGTCAATTTTCAGCTGGCATAAGGACTATTGTCGTTGTAGCTGTTGTTCCGCATGGAGTTGTACAGCTTGGTTCTTTAAATAAAATCACTGAAAATGTGAAGCTGGTATCTCATATCAAAGATGTTTTTATGGCTCAAGATTTCCCAGCAGGGCATATCCAATCTAGCATAGACAGTTCAGTATGTGAGGCAATATCTTCAAAAAAATTGGTGTCAGGGACTTTTCCGGATTGCTTGCAAAATTTAGATAAAGCCATAAATAGAGAAAAGTCTGATGTTTGGTTGTCCGCTTTTCCCCAGTCTGGGAAAGACAGTGATAGTTCTTACATTTTTCCATTGACTGGCATTCTGAAGAATGCAGTTGAAGTGGTCAATAAGCATGGAGAACTTGAGTCATCCAACATGGGAGGTGATGAGAGTCCCAAACTACATCAGTCAAAATCAAGTATCTTCAAGTTGGAAAATTGCAAATTAGTAGGAGTGGAATTACCTGATAGCAGGAAGTGTACAGGGGAGAGTAGTGGCTGCAAAGATATGGGGATGTCTTCCACAAACAATGCCAATCCATTATCTCATGCTAATGATTGTGCAGACTTATCTTCAACGTTTGTCAACTCTGCTGTAAATGACGGGGTTAATTTGGACAGTATAGATCTTTACCATAATGAGGTGTTGCACGTAAGTGAACCGTTGGATGTTAAGTTTCAGAGCAACCTTGAAAACTTGAAGTTTCCAACTGAACCAGGTCACGTGGACACATCCAGTACATCTTTGATGTTCCCTGCTGGCTGTGAGTTGCATGAAGCACTTGGACCAGCTTTTATGAATAAGAGTAACTTTTTTGATTGGGAAGCAGAGAAGATTGGAGATAGAATTACTACTGAGATGCCTGAGGGAATGAACTCTAGCCAGTTGACGTCTGATTCTTGCCCAGAGCATCTTCTTGAAGCTGTAGTGGCTAAAGTTTGCCATAGTGGCAGTCATGTTAAAAGTGAAAAATCATTCTGTAAATCAATGCAGTCTCTGTTGACAACTGAAAAGTATCCAGAGCCTTCTAGCCATACTACACATACGATTGATTCAGAAAATTATTCCATTGATCAGCCGTCTATGAGAGGAGAGGACACACAGCAATGTTTGAGCTCATCAGGAATATGTGGGGTGATATCGCCAAAATGGTTTTCGTCACCTTGTCCTAGTGCTTGTAGTGAGCAGCAGGAGAGGTCTTCAGGACCAGTTAAAAACAACAAGAAGAGGGCTAGACCTGGTGAGACTTCTAGACCTAGGCCGAGGGACAGACAATTAATCCAGGATCGTATTAAGGAACTGCGGGAGCTAACACCAAATGGAGCAAAGTGCAGTATTGATTCACTGCTGGAACGCACAATCAAGCACATGTTATTTCTTCAAAGTATCACTAAGCATGCGGATAAACTAAATAAGTGTGCTGATGCAAAGGAAACAAGCATGCTAGGATCTTCTAACTATGAAAGGGGATCGAGCTGGGCAGTGGAGGTGGGAGGCAATCTAAAAGTCTGTTCAATAGTGGTAGAGAATCTGAACAAGAGTGGGCAGATGGTTGTGGAGATGATGTGTGAAGAATGCAGCCATTTCCTTGAGATTGCAGAAGCTATAAGGAGCTTGGGTCTGACAATCTTAAAAGGTGTAACGGAGGCCCGTGGTGACAAGACATGGATATGTTTTATAGTTGAGGGGCAGGACAACAGAAACATACACAGGATGGATATCTTGTGGTCCCTTGTTCAGATACTGCAGCCCAAGAACCCTATGCAACAACAGTTATAG
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

725

Amino Acids

80.33

Weight (kDa)

5.83

Isoelectric Point (pI)

47.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
bHLH-MYC_N PF14215 6 - 167 3.9e-40 bHLH-MYC and R2R3-MYB transcription factors N-terminal
bHLH_LHW PF23176 550 - 610 4.1e-38 Transcription factor LHW bHLH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1292
AccB7I CCANNNNNTGG 2 cut(s) 72, 713
AccIII TCCGGA 1 cut(s) 598
AciI CCGC 4 cut(s) 422, 660, 1702, 1799
AclI AACGTT 1 cut(s) 977
AclWI GGATC 5 cut(s) 206, 317, 1692, 1855, 1876
AcsI RAATTY 1 cut(s) 613
AcuI CTGAAG 3 cut(s) 101, 743, 1584
AcvI CACGTG 1 cut(s) 1123
AcyI GRCGYC 1 cut(s) 1289
AdeI CACNNNGTG 1 cut(s) 25
AfaI GTAC 5 cut(s) 10, 356, 435, 880, 1138
AfiI CCNNNNNNNGG 5 cut(s) 72, 674, 675, 713, 1039
AflIII ACRYGT 1 cut(s) 1767
AjnI CCWGG 3 cut(s) 1114, 1636, 1680
AjuI GAANNNNNNNTTGG 2 cut(s) 1537, 1569
AleI CACNNNNGTG 1 cut(s) 1053
Alw21I GWGCWC 1 cut(s) 1517
Alw26I GTCTC 2 cut(s) 1398, 1637
AlwI GGATC 5 cut(s) 206, 317, 1692, 1855, 1876
AlwNI CAGNNNCTG 3 cut(s) 293, 1396, 2143
Aor13HI TCCGGA 1 cut(s) 598
AoxI GGCC 2 cut(s) 1658, 2046
ApeKI GCWGC 5 cut(s) 195, 897, 1585, 1977, 2146
ApoI RAATTY 1 cut(s) 613
AseI ATTAAT 1 cut(s) 1676
AspA2I CCTAGG 1 cut(s) 1655
AspS9I GGNCC 4 cut(s) 1184, 1604, 2047, 2127
AsuHPI GGTGA 6 cut(s) 336, 794, 1546, 1551, 1652, 2066
AsuNHI GCTAGC 1 cut(s) 223
AvaII GGWCC 3 cut(s) 1184, 1604, 2127
AvrII CCTAGG 1 cut(s) 1655
AxyI CCTNAGG 1 cut(s) 1263
BanII GRGCYC 2 cut(s) 94, 1517
BbrPI CACGTG 1 cut(s) 1123
BbsI GAAGAC 2 cut(s) 909, 1590
Bbv12I GWGCWC 1 cut(s) 1517
BbvI GCAGC 5 cut(s) 207, 884, 1597, 1989, 2158
BccI CCATC 4 cut(s) 356, 360, 1942, 2107
BceAI ACGGC 2 cut(s) 212, 1462
BcgI CGANNNNNNTGC 4 cut(s) 74, 108, 222, 256
BciT130I CCWGG 3 cut(s) 1116, 1638, 1682
BciVI GTATCC 1 cut(s) 1425
BclI TGATCA 1 cut(s) 1471
BcoDI GTCTC 2 cut(s) 1398, 1637
BfaI CTAG 9 cut(s) 224, 537, 1278, 1428, 1569, 1632, 1650, 1656, 1844
BfmI CTRYAG 2 cut(s) 1323, 2144
BfuI GTATCC 1 cut(s) 1425
BglI GCCNNNNNGGC 1 cut(s) 1347
BglII AGATCT 1 cut(s) 1024
BisI GCNGC 5 cut(s) 196, 898, 1586, 1978, 2147
BlnI CCTAGG 1 cut(s) 1655
BlsI GCNGC 5 cut(s) 197, 899, 1587, 1979, 2148
BmcAI AGTACT 1 cut(s) 356
Bme1390I CCNGG 3 cut(s) 1116, 1638, 1682
Bme18I GGWCC 3 cut(s) 1184, 1604, 2127
BmgT120I GGNCC 4 cut(s) 1184, 1604, 2047, 2127
BmiI GGNNCC 1 cut(s) 2129
BmrFI CCNGG 3 cut(s) 1116, 1638, 1682
BmrI ACTGGG 2 cut(s) 303, 664
BmsI GCATC 6 cut(s) 94, 152, 310, 1248, 1318, 1813
BmtI GCTAGC 1 cut(s) 227
BmuI ACTGGG 2 cut(s) 303, 664
BoxI GACNNNNGTC 1 cut(s) 401
BpiI GAAGAC 2 cut(s) 909, 1590
BpmI CTGGAG 1 cut(s) 200
BpuEI CTTGAG 3 cut(s) 492, 782, 2009
BsaAI YACGTR 2 cut(s) 1051, 1123
BsaBI GATNNNNATC 1 cut(s) 2117
BsaHI GRCGYC 1 cut(s) 1289
BsaJI CCNNGG 5 cut(s) 217, 228, 1655, 1661, 2050
BsaWI WCCGGW 1 cut(s) 598
BsaXI ACNNNNNCTCC 4 cut(s) 1949, 1979, 2002, 2032
Bsc4I CCNNNNNNNGG 5 cut(s) 72, 674, 675, 713, 1039
Bse1I ACTGG 7 cut(s) 183, 298, 670, 718, 1134, 1282, 1607
Bse21I CCTNAGG 1 cut(s) 1263
Bse3DI GCAATG 2 cut(s) 185, 1511
Bse8I GATNNNNATC 1 cut(s) 2117
BseAI TCCGGA 1 cut(s) 598
BseBI CCWGG 3 cut(s) 1116, 1638, 1682
BseDI CCNNGG 5 cut(s) 217, 228, 1655, 1661, 2050
BseGI GGATG 6 cut(s) 371, 767, 918, 1072, 1130, 2118
BseJI GATNNNNATC 1 cut(s) 2117
BseLI CCNNNNNNNGG 5 cut(s) 72, 674, 675, 713, 1039
BseMI GCAATG 2 cut(s) 185, 1511
BseMII CTCAG 4 cut(s) 20, 342, 1245, 1254
BseNI ACTGG 7 cut(s) 183, 298, 670, 718, 1134, 1282, 1607
BseRI GAGGAG 1 cut(s) 1503
BseXI GCAGC 5 cut(s) 207, 884, 1597, 1989, 2158
BseYI CCCAGC 2 cut(s) 517, 1875
BsgI GTGCAG 2 cut(s) 981, 1750
BshFI GGCC 2 cut(s) 1660, 2048
BsiHKAI GWGCWC 1 cut(s) 1517
BsiSI CCGG 1 cut(s) 599
BslFI GGGAC 4 cut(s) 604, 777, 1679, 2113
BslI CCNNNNNNNGG 5 cut(s) 72, 674, 675, 713, 1039
BsmAI GTCTC 2 cut(s) 1398, 1637
BsmFI GGGAC 4 cut(s) 604, 777, 1679, 2113
BsmI GAATGC 3 cut(s) 717, 733, 1979
BsnI GGCC 2 cut(s) 1660, 2048
Bsp1286I GDGCHC 2 cut(s) 94, 1517
Bsp13I TCCGGA 1 cut(s) 598
Bsp1407I TGTACA 2 cut(s) 433, 878
Bsp143I GATC 7 cut(s) 211, 309, 1024, 1471, 1684, 1847, 1868
BspACI CCGC 4 cut(s) 422, 660, 1702, 1799
BspANI GGCC 2 cut(s) 1660, 2048
BspCNI CTCAG 4 cut(s) 21, 343, 1246, 1255
BspEI TCCGGA 1 cut(s) 598
BspLI GGNNCC 1 cut(s) 2129
BspMAI CTGCAG 1 cut(s) 2148
BspOI GCTAGC 1 cut(s) 227
BspPI GGATC 5 cut(s) 206, 317, 1692, 1855, 1876
BsrDI GCAATG 2 cut(s) 185, 1511
BsrGI TGTACA 2 cut(s) 433, 878
BsrI ACTGG 7 cut(s) 183, 298, 670, 718, 1134, 1282, 1607
BssECI CCNNGG 5 cut(s) 217, 228, 1655, 1661, 2050
BssMI GATC 7 cut(s) 211, 309, 1024, 1471, 1684, 1847, 1868
BssNI GRCGYC 1 cut(s) 1289
BssT1I CCWWGG 2 cut(s) 217, 1655
Bst2UI CCWGG 3 cut(s) 1116, 1638, 1682
Bst4CI ACNGT 9 cut(s) 134, 341, 348, 359, 548, 686, 1019, 1062, 2172
Bst6I CTCTTC 1 cut(s) 1619
BstACI GRCGYC 1 cut(s) 1289
BstAPI GCANNNNNTGC 1 cut(s) 25
BstAUI TGTACA 2 cut(s) 433, 878
BstBAI YACGTR 2 cut(s) 1051, 1123
BstC8I GCNNGC 6 cut(s) 225, 388, 608, 1159, 1797, 1841
BstDEI CTNAG 5 cut(s) 29, 351, 1254, 1263, 1791
BstDSI CCRYGG 2 cut(s) 228, 2050
BstF5I GGATG 6 cut(s) 371, 767, 918, 1072, 1130, 2118
BstKTI GATC 7 cut(s) 214, 312, 1027, 1474, 1687, 1850, 1871
BstMAI GTCTC 2 cut(s) 1398, 1637
BstMBI GATC 7 cut(s) 211, 309, 1024, 1471, 1684, 1847, 1868
BstMWI GCNNNNNNNGC 3 cut(s) 25, 1328, 1347
BstNI CCWGG 3 cut(s) 1116, 1638, 1682
BstNSI RCATGY 3 cut(s) 1771, 1799, 1843
BstPAI GACNNNNGTC 1 cut(s) 401
BstSCI CCNGG 3 cut(s) 1114, 1636, 1680
BstSFI CTRYAG 2 cut(s) 1323, 2144
BstV1I GCAGC 5 cut(s) 207, 884, 1597, 1989, 2158
BstV2I GAAGAC 2 cut(s) 909, 1590
BstX2I RGATCY 3 cut(s) 309, 1024, 1847
BstYI RGATCY 3 cut(s) 309, 1024, 1847
Bsu36I CCTNAGG 1 cut(s) 1263
BsuI GTATCC 1 cut(s) 1425
BsuRI GGCC 2 cut(s) 1660, 2048
BtgI CCRYGG 2 cut(s) 228, 2050
BtsCI GGATG 6 cut(s) 371, 767, 918, 1072, 1130, 2118
BtsI GCAGTG 2 cut(s) 1742, 1887
BtsIMutI CAGTG 6 cut(s) 176, 311, 459, 691, 1742, 1887
Cac8I GCNNGC 6 cut(s) 225, 388, 608, 1159, 1797, 1841
CaiI CAGNNNCTG 3 cut(s) 293, 1396, 2143
Cfr13I GGNCC 4 cut(s) 1184, 1604, 2047, 2127
CseI GACGC 1 cut(s) 125
CsiI ACCWGGT 2 cut(s) 1114, 1636
Csp6I GTAC 5 cut(s) 9, 355, 434, 879, 1137
CviQI GTAC 5 cut(s) 9, 355, 434, 879, 1137
DdeI CTNAG 5 cut(s) 29, 351, 1254, 1263, 1791
DpnI GATC 7 cut(s) 213, 311, 1026, 1473, 1686, 1849, 1870
DpnII GATC 7 cut(s) 211, 309, 1024, 1471, 1684, 1847, 1868
DraI TTTAAA 1 cut(s) 450
DraIII CACNNNGTG 1 cut(s) 25
Eam1104I CTCTTC 1 cut(s) 1619
EarI CTCTTC 1 cut(s) 1619
Ecl136II GAGCTC 1 cut(s) 1515
Eco130I CCWWGG 2 cut(s) 217, 1655
Eco24I GRGCYC 2 cut(s) 94, 1517
Eco32I GATATC 2 cut(s) 1539, 2119
Eco47I GGWCC 3 cut(s) 1184, 1604, 2127
Eco53kI GAGCTC 1 cut(s) 1515
Eco57I CTGAAG 3 cut(s) 101, 743, 1584
Eco72I CACGTG 1 cut(s) 1123
Eco81I CCTNAGG 1 cut(s) 1263
EcoICRI GAGCTC 1 cut(s) 1515
EcoRII CCWGG 3 cut(s) 1114, 1636, 1680
EcoRV GATATC 2 cut(s) 1539, 2119
EcoT14I CCWWGG 2 cut(s) 217, 1655
EcoT38I GRGCYC 2 cut(s) 94, 1517
ErhI CCWWGG 2 cut(s) 217, 1655
FalI AAGNNNNNCTT 2 cut(s) 1193, 1225
FaqI GGGAC 4 cut(s) 604, 777, 1679, 2113
FauI CCCGC 1 cut(s) 1695
FbaI TGATCA 1 cut(s) 1471
Fnu4HI GCNGC 5 cut(s) 196, 898, 1586, 1978, 2147
FokI GGATG 6 cut(s) 378, 754, 925, 1079, 1117, 2125
FriOI GRGCYC 2 cut(s) 94, 1517
Fsp4HI GCNGC 5 cut(s) 196, 898, 1586, 1978, 2147
FspBI CTAG 9 cut(s) 224, 537, 1278, 1428, 1569, 1632, 1650, 1656, 1844
GluI GCNGC 5 cut(s) 196, 898, 1586, 1978, 2147
GsaI CCCAGC 2 cut(s) 521, 1879
GsuI CTGGAG 1 cut(s) 200
HaeIII GGCC 2 cut(s) 1660, 2048
HapII CCGG 1 cut(s) 599
HgaI GACGC 1 cut(s) 125
Hin1I GRCGYC 1 cut(s) 1289
HincII GTYRAC 3 cut(s) 985, 1287, 1401
HindII GTYRAC 3 cut(s) 985, 1287, 1401
HinfI GANTC 6 cut(s) 764, 790, 1295, 1451, 1739, 1927
HpaII CCGG 1 cut(s) 599
HphI GGTGA 6 cut(s) 336, 794, 1546, 1551, 1652, 2066
Hpy166II GTNNAC 7 cut(s) 344, 879, 985, 1058, 1126, 1287, 1401
Hpy188III TCNNGA 8 cut(s) 73, 509, 599, 1316, 1418, 1521, 1602, 1650
Hpy8I GTNNAC 7 cut(s) 344, 879, 985, 1058, 1126, 1287, 1401
HpyAV CCTTC 2 cut(s) 260, 1434
HpyCH4III ACNGT 9 cut(s) 134, 341, 348, 359, 548, 686, 1019, 1062, 2172
HpyCH4IV ACGT 4 cut(s) 977, 1050, 1122, 1289
HpyF10VI GCNNNNNNNGC 3 cut(s) 25, 1328, 1347
HpyF3I CTNAG 5 cut(s) 29, 351, 1254, 1263, 1791
HpySE526I ACGT 4 cut(s) 977, 1050, 1122, 1289
Hsp92I GRCGYC 1 cut(s) 1289
Kpn2I TCCGGA 1 cut(s) 598
Ksp22I TGATCA 1 cut(s) 1471
Kzo9I GATC 7 cut(s) 211, 309, 1024, 1471, 1684, 1847, 1868
LmnI GCTCC 3 cut(s) 1705, 1721, 2010
Lsp1109I GCAGC 5 cut(s) 207, 884, 1597, 1989, 2158
LweI GCATC 6 cut(s) 94, 152, 310, 1248, 1318, 1813
MabI ACCWGGT 2 cut(s) 1114, 1636
MaeI CTAG 9 cut(s) 224, 537, 1278, 1428, 1569, 1632, 1650, 1656, 1844
MaeII ACGT 4 cut(s) 977, 1050, 1122, 1289
MaeIII GTNAC 6 cut(s) 289, 1118, 1205, 1557, 2038, 2054
MalI GATC 7 cut(s) 213, 311, 1026, 1473, 1686, 1849, 1870
MboI GATC 7 cut(s) 211, 309, 1024, 1471, 1684, 1847, 1868
MflI RGATCY 3 cut(s) 309, 1024, 1847
MhlI GDGCHC 2 cut(s) 94, 1517
MlyI GAGTC 2 cut(s) 773, 799
MmeI TCCRAC 5 cut(s) 256, 795, 810, 1044, 1130
MroI TCCGGA 1 cut(s) 598
MseI TTAA 9 cut(s) 171, 449, 1008, 1071, 1359, 1611, 1676, 1692, 2030
MslI CAYNNNNRTG 4 cut(s) 951, 1053, 1504, 2068
MspA1I CMGCKG 1 cut(s) 386
MspI CCGG 1 cut(s) 599
MspR9I CCNGG 3 cut(s) 1116, 1638, 1682
Mva1269I GAATGC 3 cut(s) 717, 733, 1979
MvaI CCWGG 3 cut(s) 1116, 1638, 1682
MwoI GCNNNNNNNGC 3 cut(s) 25, 1328, 1347
NdeII GATC 7 cut(s) 211, 309, 1024, 1471, 1684, 1847, 1868
NheI GCTAGC 1 cut(s) 223
NlaIV GGNNCC 1 cut(s) 2129
NmeAIII GCCGAG 1 cut(s) 1686
NmuCI GTSAC 3 cut(s) 1118, 1557, 2054
NspI RCATGY 3 cut(s) 1771, 1799, 1843
OliI CACNNNNGTG 1 cut(s) 1053
PaeI GCATGC 2 cut(s) 1799, 1843
PciI ACATGT 1 cut(s) 1767
PctI GAATGC 3 cut(s) 717, 733, 1979
PfeI GAWTC 4 cut(s) 1295, 1451, 1739, 1927
PflMI CCANNNNNTGG 2 cut(s) 72, 713
PfoI TCCNGGA 1 cut(s) 1680
PkrI GCNGC 5 cut(s) 197, 899, 1587, 1979, 2148
PleI GAGTC 2 cut(s) 772, 798
PmaCI CACGTG 1 cut(s) 1123
PmlI CACGTG 1 cut(s) 1123
PpsI GAGTC 2 cut(s) 772, 798
Ppu21I YACGTR 2 cut(s) 1051, 1123
PscI ACATGT 1 cut(s) 1767
PshAI GACNNNNGTC 1 cut(s) 401
PshBI ATTAAT 1 cut(s) 1676
Psp124BI GAGCTC 1 cut(s) 1517
Psp1406I AACGTT 1 cut(s) 977
Psp6I CCWGG 3 cut(s) 1114, 1636, 1680
PspCI CACGTG 1 cut(s) 1123
PspFI CCCAGC 2 cut(s) 517, 1875
PspGI CCWGG 3 cut(s) 1114, 1636, 1680
PspN4I GGNNCC 1 cut(s) 2129
PspPI GGNCC 4 cut(s) 1184, 1604, 2047, 2127
PsrI GAACNNNNNNTAC 2 cut(s) 402, 434
PstI CTGCAG 1 cut(s) 2148
PstNI CAGNNNCTG 3 cut(s) 293, 1396, 2143
PsuI RGATCY 3 cut(s) 309, 1024, 1847
PvuII CAGCTG 1 cut(s) 386
RsaI GTAC 5 cut(s) 10, 356, 435, 880, 1138
RsaNI GTAC 5 cut(s) 9, 355, 434, 879, 1137
RseI CAYNNNNRTG 4 cut(s) 951, 1053, 1504, 2068
SacI GAGCTC 1 cut(s) 1517
SaqAI TTAA 9 cut(s) 171, 449, 1008, 1071, 1359, 1611, 1676, 1692, 2030
SatI GCNGC 5 cut(s) 196, 898, 1586, 1978, 2147
Sau3AI GATC 7 cut(s) 211, 309, 1024, 1471, 1684, 1847, 1868
Sau96I GGNCC 4 cut(s) 1184, 1604, 2047, 2127
ScaI AGTACT 1 cut(s) 356
SchI GAGTC 2 cut(s) 773, 799
ScrFI CCNGG 3 cut(s) 1116, 1638, 1682
SduI GDGCHC 2 cut(s) 94, 1517
SexAI ACCWGGT 2 cut(s) 1114, 1636
SfaNI GCATC 6 cut(s) 94, 152, 310, 1248, 1318, 1813
SfcI CTRYAG 2 cut(s) 1323, 2144
SinI GGWCC 3 cut(s) 1184, 1604, 2127
SmiMI CAYNNNNRTG 4 cut(s) 951, 1053, 1504, 2068
SmlI CTYRAG 3 cut(s) 507, 761, 1988
SmoI CTYRAG 3 cut(s) 507, 761, 1988
SphI GCATGC 2 cut(s) 1799, 1843
SsiI CCGC 4 cut(s) 422, 660, 1702, 1799
SspMI CTAG 9 cut(s) 224, 537, 1278, 1428, 1569, 1632, 1650, 1656, 1844
SstI GAGCTC 1 cut(s) 1517
StyD4I CCNGG 3 cut(s) 1114, 1636, 1680
StyI CCWWGG 2 cut(s) 217, 1655
TaaI ACNGT 9 cut(s) 134, 341, 348, 359, 548, 686, 1019, 1062, 2172
TaiI ACGT 4 cut(s) 980, 1053, 1125, 1292
TaqI TCGA 2 cut(s) 94, 1871
TatI WGTACW 4 cut(s) 354, 433, 878, 1136
TfiI GAWTC 4 cut(s) 1295, 1451, 1739, 1927
Tru1I TTAA 9 cut(s) 171, 449, 1008, 1071, 1359, 1611, 1676, 1692, 2030
Tru9I TTAA 9 cut(s) 171, 449, 1008, 1071, 1359, 1611, 1676, 1692, 2030
TscAI CASTG 6 cut(s) 183, 311, 466, 691, 1749, 1887
TseFI GTSAC 3 cut(s) 1118, 1557, 2054
TseI GCWGC 5 cut(s) 195, 897, 1585, 1977, 2146
Tsp45I GTSAC 3 cut(s) 1118, 1557, 2054
TspDTI ATGAA 4 cut(s) 1188, 1211, 1286, 1875
TspGWI ACGGA 2 cut(s) 65, 2057
TspRI CASTG 6 cut(s) 183, 311, 466, 691, 1749, 1887
Van91I CCANNNNNTGG 2 cut(s) 72, 713
VpaK11BI GGWCC 3 cut(s) 1184, 1604, 2127
VspI ATTAAT 1 cut(s) 1676
XapI RAATTY 1 cut(s) 613
XbaI TCTAGA 1 cut(s) 1649
XceI RCATGY 3 cut(s) 1771, 1799, 1843
XmaJI CCTAGG 1 cut(s) 1655
XspI CTAG 9 cut(s) 224, 537, 1278, 1428, 1569, 1632, 1650, 1656, 1844
ZraI GACGTC 1 cut(s) 1290
ZrmI AGTACT 1 cut(s) 356
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.