Brf1-like TBP-binding domain
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 413 |
| AcsI | RAATTY | 1 cut(s) | 131 |
| AcuI | CTGAAG | 1 cut(s) | 231 |
| AgsI | TTSAA | 5 cut(s) | 27, 49, 92, 203, 442 |
| AjiI | CACGTC | 1 cut(s) | 466 |
| AluBI | AGCT | 2 cut(s) | 209, 474 |
| AluI | AGCT | 2 cut(s) | 209, 474 |
| Alw26I | GTCTC | 1 cut(s) | 441 |
| AoxI | GGCC | 2 cut(s) | 17, 42 |
| ApeKI | GCWGC | 1 cut(s) | 115 |
| ApoI | RAATTY | 1 cut(s) | 131 |
| AseI | ATTAAT | 1 cut(s) | 305 |
| AsuHPI | GGTGA | 3 cut(s) | 119, 152, 326 |
| AsuII | TTCGAA | 1 cut(s) | 267 |
| BbvI | GCAGC | 1 cut(s) | 127 |
| BccI | CCATC | 2 cut(s) | 62, 131 |
| BcoDI | GTCTC | 1 cut(s) | 441 |
| BisI | GCNGC | 1 cut(s) | 116 |
| BlsI | GCNGC | 1 cut(s) | 117 |
| BmgBI | CACGTC | 1 cut(s) | 466 |
| BmiI | GGNNCC | 1 cut(s) | 373 |
| BmsI | GCATC | 1 cut(s) | 468 |
| Bpu14I | TTCGAA | 1 cut(s) | 267 |
| BsaI | GGTCTC | 1 cut(s) | 441 |
| Bse1I | ACTGG | 1 cut(s) | 420 |
| BseGI | GGATG | 3 cut(s) | 10, 73, 190 |
| BseMII | CTCAG | 2 cut(s) | 390, 473 |
| BseNI | ACTGG | 1 cut(s) | 420 |
| BseXI | GCAGC | 1 cut(s) | 127 |
| BshFI | GGCC | 2 cut(s) | 19, 44 |
| BsmAI | GTCTC | 1 cut(s) | 441 |
| BsnI | GGCC | 2 cut(s) | 19, 44 |
| Bso31I | GGTCTC | 1 cut(s) | 441 |
| Bsp119I | TTCGAA | 1 cut(s) | 267 |
| BspANI | GGCC | 2 cut(s) | 19, 44 |
| BspCNI | CTCAG | 2 cut(s) | 389, 472 |
| BspLI | GGNNCC | 1 cut(s) | 373 |
| BspT104I | TTCGAA | 1 cut(s) | 267 |
| BspTNI | GGTCTC | 1 cut(s) | 441 |
| BsrI | ACTGG | 1 cut(s) | 420 |
| Bst4CI | ACNGT | 2 cut(s) | 314, 431 |
| Bst6I | CTCTTC | 2 cut(s) | 57, 394 |
| BstBI | TTCGAA | 1 cut(s) | 267 |
| BstDEI | CTNAG | 2 cut(s) | 376, 459 |
| BstEII | GGTNACC | 1 cut(s) | 71 |
| BstF5I | GGATG | 3 cut(s) | 10, 73, 190 |
| BstMAI | GTCTC | 1 cut(s) | 441 |
| BstPI | GGTNACC | 1 cut(s) | 71 |
| BstV1I | GCAGC | 1 cut(s) | 127 |
| BsuRI | GGCC | 2 cut(s) | 19, 44 |
| BtrI | CACGTC | 1 cut(s) | 466 |
| BtsCI | GGATG | 3 cut(s) | 10, 73, 190 |
| CviAII | CATG | 2 cut(s) | 104, 394 |
| CviJI | RGCY | 5 cut(s) | 19, 44, 209, 374, 474 |
| CviKI_1 | RGCY | 5 cut(s) | 19, 44, 209, 374, 474 |
| DdeI | CTNAG | 2 cut(s) | 376, 459 |
| Eam1104I | CTCTTC | 2 cut(s) | 57, 394 |
| EarI | CTCTTC | 2 cut(s) | 57, 394 |
| Eco147I | AGGCCT | 1 cut(s) | 44 |
| Eco31I | GGTCTC | 1 cut(s) | 441 |
| Eco57I | CTGAAG | 1 cut(s) | 231 |
| Eco91I | GGTNACC | 1 cut(s) | 71 |
| EcoO65I | GGTNACC | 1 cut(s) | 71 |
| FaeI | CATG | 2 cut(s) | 107, 397 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 213, 245 |
| FatI | CATG | 2 cut(s) | 103, 393 |
| FblI | GTMKAC | 1 cut(s) | 413 |
| Fnu4HI | GCNGC | 1 cut(s) | 116 |
| FokI | GGATG | 3 cut(s) | 17, 80, 177 |
| Fsp4HI | GCNGC | 1 cut(s) | 116 |
| GluI | GCNGC | 1 cut(s) | 116 |
| HaeIII | GGCC | 2 cut(s) | 19, 44 |
| Hin1II | CATG | 2 cut(s) | 107, 397 |
| HincII | GTYRAC | 1 cut(s) | 414 |
| HindII | GTYRAC | 1 cut(s) | 414 |
| HindIII | AAGCTT | 1 cut(s) | 472 |
| HinfI | GANTC | 3 cut(s) | 257, 410, 457 |
| HphI | GGTGA | 3 cut(s) | 119, 152, 326 |
| Hpy166II | GTNNAC | 1 cut(s) | 414 |
| Hpy188I | TCNGA | 2 cut(s) | 364, 379 |
| Hpy188III | TCNNGA | 1 cut(s) | 461 |
| Hpy8I | GTNNAC | 1 cut(s) | 414 |
| Hpy99I | CGWCG | 1 cut(s) | 418 |
| HpyAV | CCTTC | 2 cut(s) | 89, 206 |
| HpyCH4III | ACNGT | 2 cut(s) | 314, 431 |
| HpyCH4IV | ACGT | 1 cut(s) | 465 |
| HpyCH4V | TGCA | 1 cut(s) | 115 |
| HpyF3I | CTNAG | 2 cut(s) | 376, 459 |
| HpySE526I | ACGT | 1 cut(s) | 465 |
| Hsp92II | CATG | 2 cut(s) | 107, 397 |
| LmnI | GCTCC | 1 cut(s) | 371 |
| LpnPI | CCDG | 2 cut(s) | 433, 446 |
| Lsp1109I | GCAGC | 1 cut(s) | 127 |
| LweI | GCATC | 1 cut(s) | 468 |
| MaeII | ACGT | 1 cut(s) | 465 |
| MaeIII | GTNAC | 2 cut(s) | 71, 425 |
| MboII | GAAGA | 7 cut(s) | 61, 74, 104, 215, 256, 351, 381 |
| MluCI | AATT | 4 cut(s) | 53, 131, 302, 322 |
| MlyI | GAGTC | 2 cut(s) | 419, 451 |
| MnlI | CCTC | 5 cut(s) | 9, 34, 58, 152, 385 |
| MseI | TTAA | 2 cut(s) | 56, 305 |
| MslI | CAYNNNNRTG | 1 cut(s) | 123 |
| NlaIII | CATG | 2 cut(s) | 107, 397 |
| NlaIV | GGNNCC | 1 cut(s) | 373 |
| NmuCI | GTSAC | 1 cut(s) | 425 |
| NspV | TTCGAA | 1 cut(s) | 267 |
| PceI | AGGCCT | 1 cut(s) | 44 |
| PfeI | GAWTC | 1 cut(s) | 257 |
| PkrI | GCNGC | 1 cut(s) | 117 |
| PleI | GAGTC | 2 cut(s) | 418, 451 |
| PpsI | GAGTC | 2 cut(s) | 418, 451 |
| PshBI | ATTAAT | 1 cut(s) | 305 |
| PspEI | GGTNACC | 1 cut(s) | 71 |
| PspN4I | GGNNCC | 1 cut(s) | 373 |
| RseI | CAYNNNNRTG | 1 cut(s) | 123 |
| SalI | GTCGAC | 1 cut(s) | 412 |
| SaqAI | TTAA | 2 cut(s) | 56, 305 |
| SatI | GCNGC | 1 cut(s) | 116 |
| SchI | GAGTC | 2 cut(s) | 419, 451 |
| SetI | ASST | 7 cut(s) | 85, 211, 231, 355, 385, 468, 476 |
| SfaNI | GCATC | 1 cut(s) | 468 |
| SfuI | TTCGAA | 1 cut(s) | 267 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 123 |
| Sse9I | AATT | 4 cut(s) | 53, 131, 302, 322 |
| SseBI | AGGCCT | 1 cut(s) | 44 |
| StuI | AGGCCT | 1 cut(s) | 44 |
| TaaI | ACNGT | 2 cut(s) | 314, 431 |
| TaiI | ACGT | 1 cut(s) | 468 |
| TaqI | TCGA | 4 cut(s) | 135, 241, 267, 413 |
| TasI | AATT | 4 cut(s) | 53, 131, 302, 322 |
| TfiI | GAWTC | 1 cut(s) | 257 |
| Tru1I | TTAA | 2 cut(s) | 56, 305 |
| Tru9I | TTAA | 2 cut(s) | 56, 305 |
| TseFI | GTSAC | 1 cut(s) | 425 |
| TseI | GCWGC | 1 cut(s) | 115 |
| Tsp45I | GTSAC | 1 cut(s) | 425 |
| TspDTI | ATGAA | 2 cut(s) | 75, 201 |
| VspI | ATTAAT | 1 cut(s) | 305 |
| XapI | RAATTY | 1 cut(s) | 131 |
| XmiI | GTMKAC | 1 cut(s) | 413 |