Belongs to the GDA1 CD39 NTPase family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G04080 AT5G18280 |
| fragaria_vesca | FvH4_1g06120 FvH4_2g05580 FvH4_2g09140 FvH4_3g22560 FvH4_3g25500 FvH4_3g25500 FvH4_3g25500 FvH4_3g25500 FvH4_3g27620 FvH4_3g43400 FvH4_4g04510 FvH4_4g13450 FvH4_5g09060 FvH4_5g09060 FvH4_6g11760 FvH4_7g24690 FvH4_7g31870 FvH4_7g32182 |
| malus_domestica | MD12G1000500.v1.1 MD14G1000200.v1.1 |
| prunus_persica | Prupe.7G001000_v2.0.a1 |
| pyrus_communis | pycom12g00050 pycom49g00020 |
| rosa_chinensis | RchiOBHm_Chr3g0448171 |
| rosa_laevigata | RLG00000025941 RLG00000032143 |
| rosa_multiflora | Rmu_co8422855.1_g000001 Rmu_sc0000338.1_g000002 Rmu_sc0000689.1_g000004 Rmu_sc0005969.1_g000033 Rmu_sc0023103.1_g000001 |
| rosa_roxburghii | Rroxscaffold_6G00426310 |
| rosa_rugosa | Rorug02G0608500 |
| rosa_samantha | Rh3AG008500 Rh3BG008000 Rh3CG008100 Rh3DG008700 Rh5BG414200 Rh5CG438800 Rh5DG428800 Rh7BG268700 Rh7BG430700 |
| rosa_wichuraiana | Rw3G000670 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 945, 1435 |
| Acc36I | ACCTGC | 1 cut(s) | 447 |
| AccB1I | GGYRCC | 1 cut(s) | 742 |
| AccII | CGCG | 2 cut(s) | 267, 462 |
| AclWI | GGATC | 6 cut(s) | 327, 540, 703, 976, 1293, 1325 |
| AcoI | YGGCCR | 1 cut(s) | 1397 |
| AcsI | RAATTY | 1 cut(s) | 939 |
| AcyI | GRCGYC | 1 cut(s) | 246 |
| AfaI | GTAC | 2 cut(s) | 74, 1033 |
| AfeI | AGCGCT | 1 cut(s) | 424 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 127, 152, 399, 466, 615, 1056 |
| AflIII | ACRYGT | 1 cut(s) | 1028 |
| AgsI | TTSAA | 2 cut(s) | 704, 1388 |
| AjiI | CACGTC | 1 cut(s) | 274 |
| AjnI | CCWGG | 2 cut(s) | 346, 1177 |
| AleI | CACNNNNGTG | 1 cut(s) | 128 |
| Alw21I | GWGCWC | 3 cut(s) | 135, 330, 1049 |
| Alw44I | GTGCAC | 1 cut(s) | 1045 |
| AlwI | GGATC | 6 cut(s) | 327, 540, 703, 976, 1293, 1325 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 668 |
| Ama87I | CYCGRG | 2 cut(s) | 323, 852 |
| Aor51HI | AGCGCT | 1 cut(s) | 424 |
| AoxI | GGCC | 2 cut(s) | 414, 1397 |
| ApaLI | GTGCAC | 1 cut(s) | 1045 |
| ApeKI | GCWGC | 9 cut(s) | 211, 252, 261, 383, 552, 848, 1127, 1196, 1391 |
| ApoI | RAATTY | 1 cut(s) | 939 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 411, 443 |
| AspLEI | GCGC | 2 cut(s) | 425, 444 |
| AspS9I | GGNCC | 1 cut(s) | 370 |
| AsuC2I | CCSGG | 2 cut(s) | 15, 147 |
| AsuHPI | GGTGA | 4 cut(s) | 115, 178, 631, 1366 |
| AvaI | CYCGRG | 2 cut(s) | 323, 852 |
| AvaII | GGWCC | 1 cut(s) | 370 |
| BaeGI | GKGCMC | 1 cut(s) | 1049 |
| BalI | TGGCCA | 1 cut(s) | 1399 |
| BanI | GGYRCC | 1 cut(s) | 742 |
| BanII | GRGCYC | 1 cut(s) | 330 |
| BbsI | GAAGAC | 1 cut(s) | 268 |
| Bbv12I | GWGCWC | 3 cut(s) | 135, 330, 1049 |
| BbvCI | CCTCAGC | 2 cut(s) | 557, 1131 |
| BbvI | GCAGC | 9 cut(s) | 198, 264, 273, 370, 564, 860, 1114, 1208, 1403 |
| BccI | CCATC | 4 cut(s) | 317, 584, 752, 1076 |
| BceAI | ACGGC | 3 cut(s) | 218, 509, 1255 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 304, 338, 1145, 1179 |
| BciT130I | CCWGG | 2 cut(s) | 348, 1179 |
| BcnI | CCSGG | 2 cut(s) | 15, 147 |
| BfaI | CTAG | 2 cut(s) | 845, 1328 |
| BfoI | RGCGCY | 1 cut(s) | 426 |
| BfuAI | ACCTGC | 1 cut(s) | 447 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 740, 1418 |
| BlpI | GCTNAGC | 1 cut(s) | 1200 |
| Bme1390I | CCNGG | 4 cut(s) | 15, 147, 348, 1179 |
| Bme18I | GGWCC | 1 cut(s) | 370 |
| BmeT110I | CYCGRG | 2 cut(s) | 323, 852 |
| BmgBI | CACGTC | 1 cut(s) | 274 |
| BmgT120I | GGNCC | 1 cut(s) | 370 |
| BmiI | GGNNCC | 4 cut(s) | 372, 607, 744, 1094 |
| BmrFI | CCNGG | 4 cut(s) | 15, 147, 348, 1179 |
| BmrI | ACTGGG | 3 cut(s) | 408, 647, 1412 |
| BmsI | GCATC | 4 cut(s) | 490, 721, 906, 1219 |
| BmuI | ACTGGG | 3 cut(s) | 408, 647, 1412 |
| BpiI | GAAGAC | 1 cut(s) | 268 |
| BpmI | CTGGAG | 1 cut(s) | 281 |
| Bpu10I | CCTNAGC | 2 cut(s) | 557, 1131 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1200 |
| BpuEI | CTTGAG | 4 cut(s) | 373, 502, 582, 1244 |
| BpuMI | CCSGG | 2 cut(s) | 15, 147 |
| BsaHI | GRCGYC | 1 cut(s) | 246 |
| BsaJI | CCNNGG | 7 cut(s) | 126, 366, 746, 1177, 1178, 1334, 1380 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 44, 74, 428, 458 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 127, 152, 399, 466, 615, 1056 |
| Bse118I | RCCGGY | 1 cut(s) | 248 |
| Bse1I | ACTGG | 4 cut(s) | 403, 613, 642, 1407 |
| Bse3DI | GCAATG | 1 cut(s) | 1304 |
| BseBI | CCWGG | 2 cut(s) | 348, 1179 |
| BseDI | CCNNGG | 7 cut(s) | 126, 366, 746, 1177, 1178, 1334, 1380 |
| BseGI | GGATG | 2 cut(s) | 1087, 1234 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 127, 152, 399, 466, 615, 1056 |
| BseMI | GCAATG | 1 cut(s) | 1304 |
| BseMII | CTCAG | 3 cut(s) | 571, 849, 1122 |
| BseNI | ACTGG | 4 cut(s) | 403, 613, 642, 1407 |
| BseRI | GAGGAG | 7 cut(s) | 83, 104, 107, 110, 293, 1089, 1205 |
| BseSI | GKGCMC | 1 cut(s) | 1049 |
| BseXI | GCAGC | 9 cut(s) | 198, 264, 273, 370, 564, 860, 1114, 1208, 1403 |
| Bsh1236I | CGCG | 2 cut(s) | 267, 462 |
| BshFI | GGCC | 2 cut(s) | 416, 1399 |
| BshNI | GGYRCC | 1 cut(s) | 742 |
| BsiHKAI | GWGCWC | 3 cut(s) | 135, 330, 1049 |
| BsiHKCI | CYCGRG | 2 cut(s) | 323, 852 |
| BsiSI | CCGG | 4 cut(s) | 15, 147, 249, 258 |
| BslFI | GGGAC | 3 cut(s) | 92, 376, 413 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 127, 152, 399, 466, 615, 1056 |
| BsmFI | GGGAC | 3 cut(s) | 92, 376, 413 |
| BsmI | GAATGC | 1 cut(s) | 513 |
| BsnI | GGCC | 2 cut(s) | 416, 1399 |
| BsoBI | CYCGRG | 2 cut(s) | 323, 852 |
| Bsp1286I | GDGCHC | 3 cut(s) | 135, 330, 1049 |
| Bsp1407I | TGTACA | 1 cut(s) | 72 |
| Bsp143I | GATC | 8 cut(s) | 237, 319, 532, 682, 695, 968, 1285, 1330 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1200 |
| Bsp19I | CCATGG | 1 cut(s) | 126 |
| BspANI | GGCC | 2 cut(s) | 416, 1399 |
| BspCNI | CTCAG | 3 cut(s) | 570, 850, 1123 |
| BspFNI | CGCG | 2 cut(s) | 267, 462 |
| BspLI | GGNNCC | 4 cut(s) | 372, 607, 744, 1094 |
| BspMI | ACCTGC | 1 cut(s) | 447 |
| BspPI | GGATC | 6 cut(s) | 327, 540, 703, 976, 1293, 1325 |
| BspQI | GCTCTTC | 1 cut(s) | 335 |
| BspT107I | GGYRCC | 1 cut(s) | 742 |
| BsrDI | GCAATG | 1 cut(s) | 1304 |
| BsrFI | RCCGGY | 1 cut(s) | 248 |
| BsrGI | TGTACA | 1 cut(s) | 72 |
| BsrI | ACTGG | 4 cut(s) | 403, 613, 642, 1407 |
| BssAI | RCCGGY | 1 cut(s) | 248 |
| BssECI | CCNNGG | 7 cut(s) | 126, 366, 746, 1177, 1178, 1334, 1380 |
| BssMI | GATC | 8 cut(s) | 237, 319, 532, 682, 695, 968, 1285, 1330 |
| BssNI | GRCGYC | 1 cut(s) | 246 |
| BssT1I | CCWWGG | 3 cut(s) | 126, 366, 1380 |
| Bst2UI | CCWGG | 2 cut(s) | 348, 1179 |
| Bst4CI | ACNGT | 4 cut(s) | 184, 583, 670, 824 |
| Bst6I | CTCTTC | 2 cut(s) | 16, 335 |
| BstACI | GRCGYC | 1 cut(s) | 246 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 894 |
| BstAUI | TGTACA | 1 cut(s) | 72 |
| BstC8I | GCNNGC | 6 cut(s) | 170, 209, 250, 478, 1138, 1206 |
| BstDEI | CTNAG | 5 cut(s) | 557, 858, 901, 1131, 1200 |
| BstDSI | CCRYGG | 2 cut(s) | 126, 1334 |
| BstF5I | GGATG | 2 cut(s) | 1087, 1234 |
| BstFNI | CGCG | 2 cut(s) | 267, 462 |
| BstH2I | RGCGCY | 1 cut(s) | 426 |
| BstHHI | GCGC | 2 cut(s) | 425, 444 |
| BstKTI | GATC | 8 cut(s) | 240, 322, 535, 685, 698, 971, 1288, 1333 |
| BstMBI | GATC | 8 cut(s) | 237, 319, 532, 682, 695, 968, 1285, 1330 |
| BstNI | CCWGG | 2 cut(s) | 348, 1179 |
| BstNSI | RCATGY | 1 cut(s) | 1032 |
| BstSCI | CCNGG | 4 cut(s) | 13, 145, 346, 1177 |
| BstSLI | GKGCMC | 1 cut(s) | 1049 |
| BstUI | CGCG | 2 cut(s) | 267, 462 |
| BstV1I | GCAGC | 9 cut(s) | 198, 264, 273, 370, 564, 860, 1114, 1208, 1403 |
| BstV2I | GAAGAC | 1 cut(s) | 268 |
| BstX2I | RGATCY | 5 cut(s) | 319, 532, 695, 1285, 1330 |
| BstYI | RGATCY | 5 cut(s) | 319, 532, 695, 1285, 1330 |
| BsuRI | GGCC | 2 cut(s) | 416, 1399 |
| BtgI | CCRYGG | 2 cut(s) | 126, 1334 |
| BtgZI | GCGATG | 1 cut(s) | 513 |
| BtrI | CACGTC | 1 cut(s) | 274 |
| BtsCI | GGATG | 2 cut(s) | 1087, 1234 |
| BtsI | GCAGTG | 1 cut(s) | 1414 |
| BtsIMutI | CAGTG | 5 cut(s) | 396, 579, 620, 1400, 1414 |
| BveI | ACCTGC | 1 cut(s) | 447 |
| Cac8I | GCNNGC | 6 cut(s) | 170, 209, 250, 478, 1138, 1206 |
| CaiI | CAGNNNCTG | 1 cut(s) | 668 |
| CfoI | GCGC | 2 cut(s) | 425, 444 |
| Cfr10I | RCCGGY | 1 cut(s) | 248 |
| Cfr13I | GGNCC | 1 cut(s) | 370 |
| CseI | GACGC | 4 cut(s) | 76, 254, 256, 939 |
| Csp6I | GTAC | 2 cut(s) | 73, 1032 |
| CviAII | CATG | 9 cut(s) | 34, 127, 142, 338, 988, 1029, 1039, 1282, 1395 |
| CviQI | GTAC | 2 cut(s) | 73, 1032 |
| DdeI | CTNAG | 5 cut(s) | 557, 858, 901, 1131, 1200 |
| DpnI | GATC | 8 cut(s) | 239, 321, 534, 684, 697, 970, 1287, 1332 |
| DpnII | GATC | 8 cut(s) | 237, 319, 532, 682, 695, 968, 1285, 1330 |
| DraI | TTTAAA | 1 cut(s) | 867 |
| EaeI | YGGCCR | 1 cut(s) | 1397 |
| Eam1104I | CTCTTC | 2 cut(s) | 16, 335 |
| EarI | CTCTTC | 2 cut(s) | 16, 335 |
| EciI | GGCGGA | 2 cut(s) | 33, 174 |
| Ecl136II | GAGCTC | 1 cut(s) | 328 |
| Eco130I | CCWWGG | 3 cut(s) | 126, 366, 1380 |
| Eco24I | GRGCYC | 1 cut(s) | 330 |
| Eco47I | GGWCC | 1 cut(s) | 370 |
| Eco47III | AGCGCT | 1 cut(s) | 424 |
| Eco53kI | GAGCTC | 1 cut(s) | 328 |
| Eco88I | CYCGRG | 2 cut(s) | 323, 852 |
| EcoICRI | GAGCTC | 1 cut(s) | 328 |
| EcoO109I | RGGNCCY | 1 cut(s) | 370 |
| EcoRII | CCWGG | 2 cut(s) | 346, 1177 |
| EcoT14I | CCWWGG | 3 cut(s) | 126, 366, 1380 |
| EcoT38I | GRGCYC | 1 cut(s) | 330 |
| ErhI | CCWWGG | 3 cut(s) | 126, 366, 1380 |
| FaeI | CATG | 9 cut(s) | 37, 130, 145, 341, 991, 1032, 1042, 1285, 1398 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1034, 1066 |
| FaqI | GGGAC | 3 cut(s) | 92, 376, 413 |
| FatI | CATG | 9 cut(s) | 33, 126, 141, 337, 987, 1028, 1038, 1281, 1394 |
| FauI | CCCGC | 1 cut(s) | 1049 |
| FokI | GGATG | 2 cut(s) | 1094, 1241 |
| FriOI | GRGCYC | 1 cut(s) | 330 |
| FspBI | CTAG | 2 cut(s) | 845, 1328 |
| GlaI | GCGC | 2 cut(s) | 424, 443 |
| GsuI | CTGGAG | 1 cut(s) | 281 |
| HaeII | RGCGCY | 1 cut(s) | 426 |
| HaeIII | GGCC | 2 cut(s) | 416, 1399 |
| HapII | CCGG | 4 cut(s) | 15, 147, 249, 258 |
| HgaI | GACGC | 4 cut(s) | 76, 254, 256, 939 |
| HhaI | GCGC | 2 cut(s) | 425, 444 |
| Hin1I | GRCGYC | 1 cut(s) | 246 |
| Hin1II | CATG | 9 cut(s) | 37, 130, 145, 341, 991, 1032, 1042, 1285, 1398 |
| Hin6I | GCGC | 2 cut(s) | 423, 442 |
| HinP1I | GCGC | 2 cut(s) | 423, 442 |
| HincII | GTYRAC | 1 cut(s) | 1147 |
| HindII | GTYRAC | 1 cut(s) | 1147 |
| HinfI | GANTC | 7 cut(s) | 27, 53, 389, 572, 767, 787, 881 |
| HpaI | GTTAAC | 1 cut(s) | 1147 |
| HpaII | CCGG | 4 cut(s) | 15, 147, 249, 258 |
| HphI | GGTGA | 4 cut(s) | 115, 178, 631, 1366 |
| Hpy166II | GTNNAC | 6 cut(s) | 177, 271, 820, 1047, 1147, 1294 |
| Hpy188I | TCNGA | 6 cut(s) | 64, 508, 664, 724, 757, 877 |
| Hpy188III | TCNNGA | 7 cut(s) | 323, 407, 530, 599, 966, 1247, 1328 |
| Hpy8I | GTNNAC | 6 cut(s) | 177, 271, 820, 1047, 1147, 1294 |
| HpyAV | CCTTC | 6 cut(s) | 67, 344, 457, 619, 997, 1354 |
| HpyCH4III | ACNGT | 4 cut(s) | 184, 583, 670, 824 |
| HpyCH4IV | ACGT | 2 cut(s) | 138, 273 |
| HpyCH4V | TGCA | 5 cut(s) | 832, 897, 987, 1047, 1281 |
| HpyF3I | CTNAG | 5 cut(s) | 557, 858, 901, 1131, 1200 |
| HpySE526I | ACGT | 2 cut(s) | 138, 273 |
| Hsp92I | GRCGYC | 1 cut(s) | 246 |
| Hsp92II | CATG | 9 cut(s) | 37, 130, 145, 341, 991, 1032, 1042, 1285, 1398 |
| HspAI | GCGC | 2 cut(s) | 423, 442 |
| KroI | GCCGGC | 1 cut(s) | 248 |
| KroNI | GCCGGC | 1 cut(s) | 250 |
| KspAI | GTTAAC | 1 cut(s) | 1147 |
| Kzo9I | GATC | 8 cut(s) | 237, 319, 532, 682, 695, 968, 1285, 1330 |
| LguI | GCTCTTC | 1 cut(s) | 335 |
| LmnI | GCTCC | 5 cut(s) | 84, 260, 306, 449, 566 |
| Lsp1109I | GCAGC | 9 cut(s) | 198, 264, 273, 370, 564, 860, 1114, 1208, 1403 |
| LweI | GCATC | 4 cut(s) | 490, 721, 906, 1219 |
| MaeI | CTAG | 2 cut(s) | 845, 1328 |
| MaeII | ACGT | 2 cut(s) | 138, 273 |
| MaeIII | GTNAC | 5 cut(s) | 184, 577, 619, 824, 840 |
| MalI | GATC | 8 cut(s) | 239, 321, 534, 684, 697, 970, 1287, 1332 |
| MboI | GATC | 8 cut(s) | 237, 319, 532, 682, 695, 968, 1285, 1330 |
| MboII | GAAGA | 5 cut(s) | 33, 268, 322, 664, 1369 |
| MflI | RGATCY | 5 cut(s) | 319, 532, 695, 1285, 1330 |
| MhlI | GDGCHC | 3 cut(s) | 135, 330, 1049 |
| MlsI | TGGCCA | 1 cut(s) | 1399 |
| MluCI | AATT | 2 cut(s) | 939, 1298 |
| MluNI | TGGCCA | 1 cut(s) | 1399 |
| MlyI | GAGTC | 3 cut(s) | 47, 398, 781 |
| MmeI | TCCRAC | 1 cut(s) | 87 |
| Mox20I | TGGCCA | 1 cut(s) | 1399 |
| MroNI | GCCGGC | 1 cut(s) | 248 |
| MscI | TGGCCA | 1 cut(s) | 1399 |
| MseI | TTAA | 4 cut(s) | 792, 866, 1146, 1254 |
| MslI | CAYNNNNRTG | 1 cut(s) | 128 |
| Msp20I | TGGCCA | 1 cut(s) | 1399 |
| MspI | CCGG | 4 cut(s) | 15, 147, 249, 258 |
| MspR9I | CCNGG | 4 cut(s) | 15, 147, 348, 1179 |
| Mva1269I | GAATGC | 1 cut(s) | 513 |
| MvaI | CCWGG | 2 cut(s) | 348, 1179 |
| MvnI | CGCG | 2 cut(s) | 267, 462 |
| NaeI | GCCGGC | 1 cut(s) | 250 |
| NciI | CCSGG | 2 cut(s) | 15, 147 |
| NcoI | CCATGG | 1 cut(s) | 126 |
| NdeII | GATC | 8 cut(s) | 237, 319, 532, 682, 695, 968, 1285, 1330 |
| NgoMIV | GCCGGC | 1 cut(s) | 248 |
| NlaIII | CATG | 9 cut(s) | 37, 130, 145, 341, 991, 1032, 1042, 1285, 1398 |
| NlaIV | GGNNCC | 4 cut(s) | 372, 607, 744, 1094 |
| NmeAIII | GCCGAG | 1 cut(s) | 412 |
| NmuCI | GTSAC | 3 cut(s) | 184, 577, 619 |
| NspI | RCATGY | 1 cut(s) | 1032 |
| OliI | CACNNNNGTG | 1 cut(s) | 128 |
| PaeR7I | CTCGAG | 2 cut(s) | 323, 852 |
| PasI | CCCWGGG | 1 cut(s) | 1178 |
| PciI | ACATGT | 1 cut(s) | 1028 |
| PciSI | GCTCTTC | 1 cut(s) | 335 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 414 |
| PctI | GAATGC | 1 cut(s) | 513 |
| PdiI | GCCGGC | 1 cut(s) | 250 |
| PfeI | GAWTC | 4 cut(s) | 27, 572, 767, 881 |
| PleI | GAGTC | 3 cut(s) | 47, 397, 781 |
| PpsI | GAGTC | 3 cut(s) | 47, 397, 781 |
| PpuMI | RGGWCCY | 1 cut(s) | 370 |
| PscI | ACATGT | 1 cut(s) | 1028 |
| PsiI | TTATAA | 2 cut(s) | 945, 1435 |
| Psp124BI | GAGCTC | 1 cut(s) | 330 |
| Psp5II | RGGWCCY | 1 cut(s) | 370 |
| Psp6I | CCWGG | 2 cut(s) | 346, 1177 |
| PspGI | CCWGG | 2 cut(s) | 346, 1177 |
| PspN4I | GGNNCC | 4 cut(s) | 372, 607, 744, 1094 |
| PspPI | GGNCC | 1 cut(s) | 370 |
| PspPPI | RGGWCCY | 1 cut(s) | 370 |
| PspXI | VCTCGAGB | 1 cut(s) | 852 |
| PstNI | CAGNNNCTG | 1 cut(s) | 668 |
| PsuI | RGATCY | 5 cut(s) | 319, 532, 695, 1285, 1330 |
| RsaI | GTAC | 2 cut(s) | 74, 1033 |
| RsaNI | GTAC | 2 cut(s) | 73, 1032 |
| RseI | CAYNNNNRTG | 1 cut(s) | 128 |
| SacI | GAGCTC | 1 cut(s) | 330 |
| SapI | GCTCTTC | 1 cut(s) | 335 |
| SaqAI | TTAA | 4 cut(s) | 792, 866, 1146, 1254 |
| Sau3AI | GATC | 8 cut(s) | 237, 319, 532, 682, 695, 968, 1285, 1330 |
| Sau96I | GGNCC | 1 cut(s) | 370 |
| SchI | GAGTC | 3 cut(s) | 47, 398, 781 |
| ScrFI | CCNGG | 4 cut(s) | 15, 147, 348, 1179 |
| SduI | GDGCHC | 3 cut(s) | 135, 330, 1049 |
| SfaNI | GCATC | 4 cut(s) | 490, 721, 906, 1219 |
| Sfr274I | CTCGAG | 2 cut(s) | 323, 852 |
| SinI | GGWCC | 1 cut(s) | 370 |
| SlaI | CTCGAG | 2 cut(s) | 323, 852 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 128 |
| SmlI | CTYRAG | 7 cut(s) | 5, 323, 352, 481, 597, 852, 1223 |
| SmoI | CTYRAG | 7 cut(s) | 5, 323, 352, 481, 597, 852, 1223 |
| Sse9I | AATT | 2 cut(s) | 939, 1298 |
| SspI | AATATT | 1 cut(s) | 659 |
| SspMI | CTAG | 2 cut(s) | 845, 1328 |
| SstI | GAGCTC | 1 cut(s) | 330 |
| StyD4I | CCNGG | 4 cut(s) | 13, 145, 346, 1177 |
| StyI | CCWWGG | 3 cut(s) | 126, 366, 1380 |
| TaaI | ACNGT | 4 cut(s) | 184, 583, 670, 824 |
| TaiI | ACGT | 2 cut(s) | 141, 276 |
| TaqI | TCGA | 6 cut(s) | 285, 324, 342, 408, 681, 853 |
| TasI | AATT | 2 cut(s) | 939, 1298 |
| TatI | WGTACW | 1 cut(s) | 72 |
| TauI | GCSGC | 6 cut(s) | 153, 156, 159, 168, 267, 737 |
| TfiI | GAWTC | 4 cut(s) | 27, 572, 767, 881 |
| Tru1I | TTAA | 4 cut(s) | 792, 866, 1146, 1254 |
| Tru9I | TTAA | 4 cut(s) | 792, 866, 1146, 1254 |
| TscAI | CASTG | 5 cut(s) | 403, 586, 620, 1407, 1414 |
| TseFI | GTSAC | 3 cut(s) | 184, 577, 619 |
| TseI | GCWGC | 9 cut(s) | 211, 252, 261, 383, 552, 848, 1127, 1196, 1391 |
| Tsp45I | GTSAC | 3 cut(s) | 184, 577, 619 |
| TspDTI | ATGAA | 5 cut(s) | 326, 1016, 1035, 1055, 1098 |
| TspGWI | ACGGA | 3 cut(s) | 565, 1105, 1323 |
| TspRI | CASTG | 5 cut(s) | 403, 586, 620, 1407, 1414 |
| VneI | GTGCAC | 1 cut(s) | 1045 |
| VpaK11BI | GGWCC | 1 cut(s) | 370 |
| XapI | RAATTY | 1 cut(s) | 939 |
| XbaI | TCTAGA | 1 cut(s) | 1327 |
| XceI | RCATGY | 1 cut(s) | 1032 |
| XhoI | CTCGAG | 2 cut(s) | 323, 852 |
| XspI | CTAG | 2 cut(s) | 845, 1328 |