Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0001988

Physical Location & Seq

Genomic Coordinates Reverse (-)

49340049 .. 49343830

Gene Structure 3782 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000025941

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1722 bp

ATGCGGATCTGTTTCTGGGTTTGGTCTATTCAACCTGATCCGGGGATGGGTCTGTCTGACTGGGCTGCTGTGGTTCCGGCGGTGAGGTGCAGTTGGTCCTTGGTGGAGGCTTGGGCCTGGACTGGGCTGGTTTTTTTGATTCTGAGGTGGTGGTCTGGAGGAGGCGTGACCAGATGGGTGACGTTACGGTGGTGGGGGATGTGTTCTGGTGGGGATTGGCTGGCGATGCCCTCGTGTTCAGACCCAAATCTGGAGCCTGAGGGGAAGCAGATCCGTTACAGATCGCCTTCGTCGGCCGAACTCCTCGAATCTCAGACCACCTCTCCCCCCTCCGATCACTCCCAAATGCTGAAACGTCCTCCCAGAGGGAGCTCCGACTCCCTCTCCGACAAGCTCTACAAGTACCGGAGCCTCCTCCTCCTCGTCTCCGTCCCTCTTCTCCTCCTGACCACGCTCCTCTACCTCACCCCCTCCTCTCGCATTCCCATTCAGACTCCCTCTTCCACCTCCTACGCCGTCATCTTCGACGCCGGCAGCTCCGGCAGCCGCGTCCACGTCTTCTCTTTCGACCGCAACCTCAACCTCCTCCCCATCGGCAAAGATCTCGAGCTCTTCATTCAGAAAAAGCCCGGCCTCAGCTTCTACGCCGCCGATCCCCGCAGCGCCGCCAAGTCACTCACCGATCTCCTCCAAAAGGCGGAGGCCGCCGTTCCCGAAGACCTCCGTCCCTTCACCCCCGTCCGCGTCGGCGCAACCGCCGGCCTCAGAGCGTTGGGGACTGATGCTTCCAATCGCATTCTTCAGGCCGTTAGGGATTTGTTGAAACAAACAAGCTCCCTCAACTCCGGTCCTAATTCTGTTACTGTCATTGATGGAACTCAGGAGGGTTCGTTCCAGTGGGTGACTATCAACTATCTTCTAGGCAATTTGGGGAAGCAATATTCGGATACGGTTGGGGTGGTTGATCTCGGGGGTGGATCTGTTCAAATGGCTTATGCTATCTCAGACGCCGATGCTGCAAAGGCACCGGAGCTTTCCGACGGCGAGGATTCGTATGTGAGGAAAATGTCTCTTAAAGGAACAACTTATAACCTCTATGTTCACAGTTATCTGCACTACGGGTTACTAGCAGCTCGAGCAGAGATTTTAAAGGTTTCTGAAGACTCTGGCAACCCCTGTATTTTAACTGGATATAATGGTTCTTACAAATATGGAGGAGAATCTTTTAAAGCATCAGCTTCCTCATCTGGATCAAGCCTAGATGGGTGCAGGAGGGTTGCTCTGAAGGCACTAAAAGTAAACGAAGCGACATGTACACACATGAAATGCACATTTGGCGGGGTATGGAATGGTGGAGGAGGGGATGGACAAAAGAACCTATTTGTTGCCTCGTTTTTCTTTGACAGAGCTGCTGAGGCTGGTTTTGTTAACCCAAACGAACCTGTTGCCAAAGTTCACCCTGGAAACTTTGAGGAGGCAGCTAAGCGTGCTTGTCAAACTAAACTTGAGGATGCCAAATCCACGTATCGAAATGTTGAAGAGGACAACCTGCCTTACTTGTGCATGGATCTTGTATACCAGTTTACATTGCTTGTAGATGGATTTGGTCTAGATCCATGGCAAGAGATTACATTGGTGAAGAAAGTTAAATATAATAATGCCTTGGTTGAAGCGGCATGGCCACTAGGCAGTGCCATAGAAGCGGTTTCCTCATTAAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00230 ko00240 map00230 map00240

Pfam Domains

Protein Families

GDA1_CD39

Protein Analysis

574

Amino Acids

62.39

Weight (kDa)

6.36

Isoelectric Point (pI)

43.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GDA1_CD39	PF01150	165 - 571	5.3e-105	GDA1/CD39 (nucleoside phosphatase) family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001988)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G04080 AT5G18280
fragaria_vesca	FvH4_1g06120 FvH4_2g05580 FvH4_2g09140 FvH4_3g22560 FvH4_3g25500 FvH4_3g25500 FvH4_3g25500 FvH4_3g25500 FvH4_3g27620 FvH4_3g43400 FvH4_4g04510 FvH4_4g13450 FvH4_5g09060 FvH4_5g09060 FvH4_6g11760 FvH4_7g24690 FvH4_7g31870 FvH4_7g32182
malus_domestica	MD12G1000500.v1.1 MD14G1000200.v1.1
prunus_persica	Prupe.7G001000_v2.0.a1
pyrus_communis	pycom12g00050 pycom49g00020
rosa_chinensis	RchiOBHm_Chr3g0448171
rosa_laevigata	RLG00000025941 RLG00000032143
rosa_multiflora	Rmu_co8422855.1_g000001 Rmu_sc0000338.1_g000002 Rmu_sc0000689.1_g000004 Rmu_sc0005969.1_g000033 Rmu_sc0023103.1_g000001
rosa_roxburghii	Rroxscaffold_6G00426310
rosa_rugosa	Rorug02G0608500
rosa_samantha	Rh3AG008500 Rh3BG008000 Rh3CG008100 Rh3DG008700 Rh5BG414200 Rh5CG438800 Rh5DG428800 Rh7BG268700 Rh7BG430700
rosa_wichuraiana	Rw3G000670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1089
Acc36I	ACCTGC	1 cut(s)	1557
AccB1I	GGYRCC	1 cut(s)	1024
AccI	GTMKAC	1 cut(s)	1575
AccII	CGCG	2 cut(s)	549, 744
AclWI	GGATC	8 cut(s)	14, 32, 265, 647, 985, 1258, 1575, 1607
AcoI	YGGCCR	2 cut(s)	294, 1679
AcuI	CTGAAG	3 cut(s)	785, 1179, 1304
AcyI	GRCGYC	2 cut(s)	528, 1008
AfaI	GTAC	2 cut(s)	404, 1315
AfiI	CCNNNNNNNGG	7 cut(s)	41, 47, 123, 250, 365, 694, 697
AflIII	ACRYGT	1 cut(s)	1310
AgsI	TTSAA	5 cut(s)	32, 823, 986, 1538, 1670
AjiI	CACGTC	1 cut(s)	556
AjnI	CCWGG	2 cut(s)	116, 1459
AloI	GAACNNNNNNTCC	2 cut(s)	875, 907
Alw21I	GWGCWC	2 cut(s)	374, 612
Alw26I	GTCTC	2 cut(s)	430, 1074
AlwI	GGATC	8 cut(s)	14, 32, 265, 647, 985, 1258, 1575, 1607
Ama87I	CYCGRG	3 cut(s)	605, 968, 1134
AoxI	GGCC	7 cut(s)	114, 294, 631, 702, 760, 804, 1679
ApeKI	GCWGC	8 cut(s)	65, 534, 543, 660, 1016, 1130, 1409, 1478
AspLEI	GCGC	2 cut(s)	665, 752
AspS9I	GGNCC	3 cut(s)	96, 114, 848
AsuC2I	CCSGG	2 cut(s)	42, 630
AsuHPI	GGTGA	8 cut(s)	94, 190, 457, 670, 724, 913, 1448, 1648
AvaI	CYCGRG	3 cut(s)	605, 968, 1134
AvaII	GGWCC	2 cut(s)	96, 848
AxyI	CCTNAGG	1 cut(s)	258
BalI	TGGCCA	1 cut(s)	1681
BanI	GGYRCC	1 cut(s)	1024
BanII	GRGCYC	2 cut(s)	374, 612
BauI	CACGAG	1 cut(s)	232
BbsI	GAAGAC	3 cut(s)	550, 723, 1167
Bbv12I	GWGCWC	2 cut(s)	374, 612
BbvCI	CCTCAGC	2 cut(s)	635, 1413
BbvI	GCAGC	8 cut(s)	52, 546, 555, 672, 1003, 1142, 1396, 1490
BccI	CCATC	7 cut(s)	40, 168, 599, 866, 1256, 1358, 1592
BceAI	ACGGC	4 cut(s)	500, 692, 791, 1057
BcgI	CGANNNNNNTGC	4 cut(s)	586, 620, 1427, 1461
BciT130I	CCWGG	2 cut(s)	118, 1461
BciVI	GTATCC	1 cut(s)	940
BcnI	CCSGG	2 cut(s)	42, 630
BcoDI	GTCTC	2 cut(s)	430, 1074
BfaI	CTAG	5 cut(s)	920, 1127, 1259, 1610, 1685
BfoI	RGCGCY	1 cut(s)	666
BfuAI	ACCTGC	1 cut(s)	1557
BfuI	GTATCC	1 cut(s)	940
BglII	AGATCT	1 cut(s)	601
BlpI	GCTNAGC	1 cut(s)	1482
Bme1390I	CCNGG	4 cut(s)	42, 118, 630, 1461
Bme18I	GGWCC	2 cut(s)	96, 848
BmeT110I	CYCGRG	3 cut(s)	605, 968, 1134
BmgBI	CACGTC	1 cut(s)	556
BmgT120I	GGNCC	3 cut(s)	96, 114, 848
BmiI	GGNNCC	4 cut(s)	75, 255, 410, 1026
BmrFI	CCNGG	4 cut(s)	42, 118, 630, 1461
BmrI	ACTGGG	2 cut(s)	70, 132
BmsI	GCATC	5 cut(s)	216, 772, 1003, 1241, 1501
BmuI	ACTGGG	2 cut(s)	70, 132
BoxI	GACNNNNGTC	1 cut(s)	723
BpiI	GAAGAC	3 cut(s)	550, 723, 1167
BplI	GAGNNNNNCTC	2 cut(s)	1264, 1296
BpmI	CTGGAG	2 cut(s)	177, 272
Bpu10I	CCTNAGC	2 cut(s)	635, 1413
Bpu1102I	GCTNAGC	1 cut(s)	1482
BpuEI	CTTGAG	1 cut(s)	1526
BpuMI	CCSGG	2 cut(s)	42, 630
BsaAI	YACGTR	1 cut(s)	1524
BsaHI	GRCGYC	2 cut(s)	528, 1008
BsaJI	CCNNGG	5 cut(s)	41, 99, 1459, 1616, 1662
BsaWI	WCCGGW	3 cut(s)	405, 845, 1027
BsaXI	ACNNNNNCTCC	8 cut(s)	150, 180, 307, 337, 368, 398, 875, 905
Bsc4I	CCNNNNNNNGG	7 cut(s)	41, 47, 123, 250, 365, 694, 697
Bse118I	RCCGGY	2 cut(s)	530, 758
Bse1I	ACTGG	5 cut(s)	65, 127, 895, 1192, 1579
Bse21I	CCTNAGG	1 cut(s)	258
Bse3DI	GCAATG	1 cut(s)	1586
BseBI	CCWGG	2 cut(s)	118, 1461
BseDI	CCNNGG	5 cut(s)	41, 99, 1459, 1616, 1662
BseGI	GGATG	4 cut(s)	51, 204, 1369, 1516
BseLI	CCNNNNNNNGG	7 cut(s)	41, 47, 123, 250, 365, 694, 697
BseMI	GCAATG	1 cut(s)	1586
BseMII	CTCAG	8 cut(s)	134, 249, 326, 649, 778, 893, 1017, 1404
BseNI	ACTGG	5 cut(s)	65, 127, 895, 1192, 1579
BseX3I	CGGCCG	1 cut(s)	294
BseXI	GCAGC	8 cut(s)	52, 546, 555, 672, 1003, 1142, 1396, 1490
BsgI	GTGCAG	3 cut(s)	109, 1097, 1288
Bsh1236I	CGCG	2 cut(s)	549, 744
Bsh1285I	CGRYCG	2 cut(s)	297, 571
BshFI	GGCC	7 cut(s)	116, 296, 633, 704, 762, 806, 1681
BshNI	GGYRCC	1 cut(s)	1024
BsiEI	CGRYCG	2 cut(s)	297, 571
BsiHKAI	GWGCWC	2 cut(s)	374, 612
BsiHKCI	CYCGRG	3 cut(s)	605, 968, 1134
BsiSI	CCGG	9 cut(s)	41, 77, 406, 531, 540, 630, 759, 846, 1028
BslFI	GGGAC	3 cut(s)	416, 711, 790
BslI	CCNNNNNNNGG	7 cut(s)	41, 47, 123, 250, 365, 694, 697
BsmAI	GTCTC	2 cut(s)	430, 1074
BsmBI	CGTCTC	1 cut(s)	430
BsmFI	GGGAC	3 cut(s)	416, 711, 790
BsmI	GAATGC	2 cut(s)	480, 795
BsnI	GGCC	7 cut(s)	116, 296, 633, 704, 762, 806, 1681
BsoBI	CYCGRG	3 cut(s)	605, 968, 1134
Bsp1286I	GDGCHC	2 cut(s)	374, 612
Bsp1407I	TGTACA	1 cut(s)	1313
Bsp1720I	GCTNAGC	1 cut(s)	1482
Bsp19I	CCATGG	1 cut(s)	1616
BspANI	GGCC	7 cut(s)	116, 296, 633, 704, 762, 806, 1681
BspCNI	CTCAG	8 cut(s)	135, 250, 325, 648, 777, 892, 1016, 1405
BspFNI	CGCG	2 cut(s)	549, 744
BspLI	GGNNCC	4 cut(s)	75, 255, 410, 1026
BspMI	ACCTGC	1 cut(s)	1557
BspPI	GGATC	8 cut(s)	14, 32, 265, 647, 985, 1258, 1575, 1607
BspQI	GCTCTTC	1 cut(s)	617
BspT107I	GGYRCC	1 cut(s)	1024
BsrDI	GCAATG	1 cut(s)	1586
BsrFI	RCCGGY	2 cut(s)	530, 758
BsrGI	TGTACA	1 cut(s)	1313
BsrI	ACTGG	5 cut(s)	65, 127, 895, 1192, 1579
BssAI	RCCGGY	2 cut(s)	530, 758
BssECI	CCNNGG	5 cut(s)	41, 99, 1459, 1616, 1662
BssNAI	GTATAC	1 cut(s)	1576
BssNI	GRCGYC	2 cut(s)	528, 1008
BssSI	CACGAG	1 cut(s)	232
BssT1I	CCWWGG	3 cut(s)	99, 1616, 1662
Bst1107I	GTATAC	1 cut(s)	1576
Bst2BI	CACGAG	1 cut(s)	232
Bst2UI	CCWGG	2 cut(s)	118, 1461
Bst4CI	ACNGT	4 cut(s)	189, 865, 952, 1106
Bst6I	CTCTTC	4 cut(s)	441, 505, 617, 1533
BstACI	GRCGYC	2 cut(s)	528, 1008
BstAUI	TGTACA	1 cut(s)	1313
BstBAI	YACGTR	1 cut(s)	1524
BstC8I	GCNNGC	4 cut(s)	222, 532, 760, 1488
BstDEI	CTNAG	9 cut(s)	143, 258, 312, 635, 764, 879, 1003, 1413, 1482
BstDSI	CCRYGG	1 cut(s)	1616
BstENI	CCTNNNNNAGG	2 cut(s)	363, 692
BstF5I	GGATG	4 cut(s)	51, 204, 1369, 1516
BstFNI	CGCG	2 cut(s)	549, 744
BstH2I	RGCGCY	1 cut(s)	666
BstHHI	GCGC	2 cut(s)	665, 752
BstMAI	GTCTC	2 cut(s)	430, 1074
BstMCI	CGRYCG	2 cut(s)	297, 571
BstNI	CCWGG	2 cut(s)	118, 1461
BstNSI	RCATGY	1 cut(s)	1314
BstPAI	GACNNNNGTC	1 cut(s)	723
BstSCI	CCNGG	4 cut(s)	40, 116, 628, 1459
BstUI	CGCG	2 cut(s)	549, 744
BstV1I	GCAGC	8 cut(s)	52, 546, 555, 672, 1003, 1142, 1396, 1490
BstV2I	GAAGAC	3 cut(s)	550, 723, 1167
BstX2I	RGATCY	6 cut(s)	6, 270, 601, 977, 1567, 1612
BstYI	RGATCY	6 cut(s)	6, 270, 601, 977, 1567, 1612
BstZ17I	GTATAC	1 cut(s)	1576
BstZI	CGGCCG	1 cut(s)	294
Bsu36I	CCTNAGG	1 cut(s)	258
BsuI	GTATCC	1 cut(s)	940
BsuRI	GGCC	7 cut(s)	116, 296, 633, 704, 762, 806, 1681
BtgI	CCRYGG	1 cut(s)	1616
BtgZI	GCGATG	1 cut(s)	239
BtrI	CACGTC	1 cut(s)	556
BtsCI	GGATG	4 cut(s)	51, 204, 1369, 1516
BtsI	GCAGTG	1 cut(s)	1696
BtsIMutI	CAGTG	2 cut(s)	902, 1696
BveI	ACCTGC	1 cut(s)	1557
Cac8I	GCNNGC	4 cut(s)	222, 532, 760, 1488
CfoI	GCGC	2 cut(s)	665, 752
Cfr10I	RCCGGY	2 cut(s)	530, 758
Cfr13I	GGNCC	3 cut(s)	96, 114, 848
CseI	GACGC	4 cut(s)	536, 538, 733, 1016
Csp6I	GTAC	2 cut(s)	403, 1314
CviAII	CATG	5 cut(s)	1311, 1321, 1564, 1617, 1677
CviQI	GTAC	2 cut(s)	403, 1314
DdeI	CTNAG	9 cut(s)	143, 258, 312, 635, 764, 879, 1003, 1413, 1482
DraI	TTTAAA	2 cut(s)	1149, 1228
EaeI	YGGCCR	2 cut(s)	294, 1679
EagI	CGGCCG	1 cut(s)	294
Eam1104I	CTCTTC	4 cut(s)	441, 505, 617, 1533
EarI	CTCTTC	4 cut(s)	441, 505, 617, 1533
EciI	GGCGGA	1 cut(s)	713
Ecl136II	GAGCTC	2 cut(s)	372, 610
EclXI	CGGCCG	1 cut(s)	294
Eco130I	CCWWGG	3 cut(s)	99, 1616, 1662
Eco24I	GRGCYC	2 cut(s)	374, 612
Eco47I	GGWCC	2 cut(s)	96, 848
Eco52I	CGGCCG	1 cut(s)	294
Eco53kI	GAGCTC	2 cut(s)	372, 610
Eco57I	CTGAAG	3 cut(s)	785, 1179, 1304
Eco81I	CCTNAGG	1 cut(s)	258
Eco88I	CYCGRG	3 cut(s)	605, 968, 1134
EcoICRI	GAGCTC	2 cut(s)	372, 610
EcoNI	CCTNNNNNAGG	2 cut(s)	363, 692
EcoRII	CCWGG	2 cut(s)	116, 1459
EcoT14I	CCWWGG	3 cut(s)	99, 1616, 1662
EcoT38I	GRGCYC	2 cut(s)	374, 612
ErhI	CCWWGG	3 cut(s)	99, 1616, 1662
Esp3I	CGTCTC	1 cut(s)	430
FaeI	CATG	5 cut(s)	1314, 1324, 1567, 1620, 1680
FaqI	GGGAC	3 cut(s)	416, 711, 790
FatI	CATG	5 cut(s)	1310, 1320, 1563, 1616, 1676
FauI	CCCGC	2 cut(s)	665, 1331
FblI	GTMKAC	1 cut(s)	1575
FokI	GGATG	4 cut(s)	58, 211, 1376, 1523
FriOI	GRGCYC	2 cut(s)	374, 612
FspBI	CTAG	5 cut(s)	920, 1127, 1259, 1610, 1685
GlaI	GCGC	2 cut(s)	664, 751
GsuI	CTGGAG	2 cut(s)	177, 272
HaeII	RGCGCY	1 cut(s)	666
HaeIII	GGCC	7 cut(s)	116, 296, 633, 704, 762, 806, 1681
HapII	CCGG	9 cut(s)	41, 77, 406, 531, 540, 630, 759, 846, 1028
HgaI	GACGC	4 cut(s)	536, 538, 733, 1016
HhaI	GCGC	2 cut(s)	665, 752
Hin1I	GRCGYC	2 cut(s)	528, 1008
Hin1II	CATG	5 cut(s)	1314, 1324, 1567, 1620, 1680
Hin6I	GCGC	2 cut(s)	663, 750
HinP1I	GCGC	2 cut(s)	663, 750
HincII	GTYRAC	1 cut(s)	1429
HindII	GTYRAC	1 cut(s)	1429
HinfI	GANTC	7 cut(s)	139, 308, 377, 493, 1049, 1163, 1220
HpaI	GTTAAC	1 cut(s)	1429
HpaII	CCGG	9 cut(s)	41, 77, 406, 531, 540, 630, 759, 846, 1028
HphI	GGTGA	8 cut(s)	94, 190, 457, 670, 724, 913, 1448, 1648
Hpy166II	GTNNAC	8 cut(s)	553, 1102, 1300, 1316, 1429, 1456, 1576, 1584
Hpy188III	TCNNGA	8 cut(s)	156, 251, 445, 605, 713, 881, 1248, 1610
Hpy8I	GTNNAC	8 cut(s)	553, 1102, 1300, 1316, 1429, 1456, 1576, 1584
Hpy99I	CGWCG	4 cut(s)	295, 530, 749, 1043
HpyAV	CCTTC	3 cut(s)	297, 739, 1279
HpyCH4III	ACNGT	4 cut(s)	189, 865, 952, 1106
HpyCH4IV	ACGT	4 cut(s)	182, 355, 555, 1523
HpyCH4V	TGCA	6 cut(s)	90, 1019, 1114, 1269, 1329, 1563
HpyF3I	CTNAG	9 cut(s)	143, 258, 312, 635, 764, 879, 1003, 1413, 1482
HpySE526I	ACGT	4 cut(s)	182, 355, 555, 1523
Hsp92I	GRCGYC	2 cut(s)	528, 1008
Hsp92II	CATG	5 cut(s)	1314, 1324, 1567, 1620, 1680
HspAI	GCGC	2 cut(s)	663, 750
KroI	GCCGGC	2 cut(s)	530, 758
KroNI	GCCGGC	2 cut(s)	532, 760
KspAI	GTTAAC	1 cut(s)	1429
LguI	GCTCTTC	1 cut(s)	617
LmnI	GCTCC	8 cut(s)	253, 369, 377, 408, 459, 542, 839, 1030
Lsp1109I	GCAGC	8 cut(s)	52, 546, 555, 672, 1003, 1142, 1396, 1490
LweI	GCATC	5 cut(s)	216, 772, 1003, 1241, 1501
MaeI	CTAG	5 cut(s)	920, 1127, 1259, 1610, 1685
MaeII	ACGT	4 cut(s)	182, 355, 555, 1523
MaeIII	GTNAC	8 cut(s)	166, 178, 183, 275, 672, 859, 901, 1122
MflI	RGATCY	6 cut(s)	6, 270, 601, 977, 1567, 1612
MhlI	GDGCHC	2 cut(s)	374, 612
MlsI	TGGCCA	1 cut(s)	1681
MluCI	AATT	3 cut(s)	853, 925, 1717
MluNI	TGGCCA	1 cut(s)	1681
MlyI	GAGTC	3 cut(s)	371, 487, 1157
MmeI	TCCRAC	3 cut(s)	399, 411, 1062
Mox20I	TGGCCA	1 cut(s)	1681
MroNI	GCCGGC	2 cut(s)	530, 758
MscI	TGGCCA	1 cut(s)	1681
MseI	TTAA	7 cut(s)	1074, 1148, 1184, 1227, 1428, 1647, 1715
Msp20I	TGGCCA	1 cut(s)	1681
MspI	CCGG	9 cut(s)	41, 77, 406, 531, 540, 630, 759, 846, 1028
MspR9I	CCNGG	4 cut(s)	42, 118, 630, 1461
Mva1269I	GAATGC	2 cut(s)	480, 795
MvaI	CCWGG	2 cut(s)	118, 1461
MvnI	CGCG	2 cut(s)	549, 744
NaeI	GCCGGC	2 cut(s)	532, 760
NciI	CCSGG	2 cut(s)	42, 630
NcoI	CCATGG	1 cut(s)	1616
NgoMIV	GCCGGC	2 cut(s)	530, 758
NlaIII	CATG	5 cut(s)	1314, 1324, 1567, 1620, 1680
NlaIV	GGNNCC	4 cut(s)	75, 255, 410, 1026
NmuCI	GTSAC	4 cut(s)	166, 178, 672, 901
NspI	RCATGY	1 cut(s)	1314
PaeR7I	CTCGAG	2 cut(s)	605, 1134
PciI	ACATGT	1 cut(s)	1310
PciSI	GCTCTTC	1 cut(s)	617
PctI	GAATGC	2 cut(s)	480, 795
PdiI	GCCGGC	2 cut(s)	532, 760
PfeI	GAWTC	4 cut(s)	139, 308, 1049, 1220
PleI	GAGTC	3 cut(s)	371, 487, 1157
PpsI	GAGTC	3 cut(s)	371, 487, 1157
Ppu21I	YACGTR	1 cut(s)	1524
PscI	ACATGT	1 cut(s)	1310
PshAI	GACNNNNGTC	1 cut(s)	723
PsiI	TTATAA	1 cut(s)	1089
Psp124BI	GAGCTC	2 cut(s)	374, 612
Psp6I	CCWGG	2 cut(s)	116, 1459
PspGI	CCWGG	2 cut(s)	116, 1459
PspN4I	GGNNCC	4 cut(s)	75, 255, 410, 1026
PspPI	GGNCC	3 cut(s)	96, 114, 848
PspXI	VCTCGAGB	1 cut(s)	1134
PsuI	RGATCY	6 cut(s)	6, 270, 601, 977, 1567, 1612
RsaI	GTAC	2 cut(s)	404, 1315
RsaNI	GTAC	2 cut(s)	403, 1314
SacI	GAGCTC	2 cut(s)	374, 612
SapI	GCTCTTC	1 cut(s)	617
SaqAI	TTAA	7 cut(s)	1074, 1148, 1184, 1227, 1428, 1647, 1715
Sau96I	GGNCC	3 cut(s)	96, 114, 848
SchI	GAGTC	3 cut(s)	371, 487, 1157
ScrFI	CCNGG	4 cut(s)	42, 118, 630, 1461
SduI	GDGCHC	2 cut(s)	374, 612
SfaNI	GCATC	5 cut(s)	216, 772, 1003, 1241, 1501
Sfr274I	CTCGAG	2 cut(s)	605, 1134
SinI	GGWCC	2 cut(s)	96, 848
SlaI	CTCGAG	2 cut(s)	605, 1134
SmlI	CTYRAG	3 cut(s)	605, 1134, 1505
SmoI	CTYRAG	3 cut(s)	605, 1134, 1505
Sse9I	AATT	3 cut(s)	853, 925, 1717
SspI	AATATT	1 cut(s)	941
SspMI	CTAG	5 cut(s)	920, 1127, 1259, 1610, 1685
SstI	GAGCTC	2 cut(s)	374, 612
StyD4I	CCNGG	4 cut(s)	40, 116, 628, 1459
StyI	CCWWGG	3 cut(s)	99, 1616, 1662
TaaI	ACNGT	4 cut(s)	189, 865, 952, 1106
TaiI	ACGT	4 cut(s)	185, 358, 558, 1526
TaqI	TCGA	6 cut(s)	306, 525, 567, 606, 1135, 1528
TasI	AATT	3 cut(s)	853, 925, 1717
TatI	WGTACW	1 cut(s)	1313
TauI	GCSGC	5 cut(s)	549, 650, 668, 707, 1676
TfiI	GAWTC	4 cut(s)	139, 308, 1049, 1220
Tru1I	TTAA	7 cut(s)	1074, 1148, 1184, 1227, 1428, 1647, 1715
Tru9I	TTAA	7 cut(s)	1074, 1148, 1184, 1227, 1428, 1647, 1715
TscAI	CASTG	2 cut(s)	902, 1696
TseFI	GTSAC	4 cut(s)	166, 178, 672, 901
TseI	GCWGC	8 cut(s)	65, 534, 543, 660, 1016, 1130, 1409, 1478
Tsp45I	GTSAC	4 cut(s)	166, 178, 672, 901
TspDTI	ATGAA	2 cut(s)	604, 1337
TspGWI	ACGGA	3 cut(s)	263, 418, 713
TspRI	CASTG	2 cut(s)	902, 1696
VpaK11BI	GGWCC	2 cut(s)	96, 848
XagI	CCTNNNNNAGG	2 cut(s)	363, 692
XbaI	TCTAGA	1 cut(s)	1609
XceI	RCATGY	1 cut(s)	1314
XhoI	CTCGAG	2 cut(s)	605, 1134
XmiI	GTMKAC	1 cut(s)	1575
XspI	CTAG	5 cut(s)	920, 1127, 1259, 1610, 1685

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.