Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0002393

Physical Location & Seq

Genomic Coordinates Reverse (-)

6417056 .. 6422102

Gene Structure 5047 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G034700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 999 bp

ATGCCGTATCTTGTTCGTGAGAATCTATTCCTCGGCAACATCCGCGACGCGACAGAGGTTATCCGAAATGGCAGCAAAGAGATCACACATATTCTCTGTGCAATTCCCACAAAGGAAATCAAGGTTTATGATGCCGGGTCTGTTGGTGGGTCAGCTTCTGTTGGTGATGGGTCGATAAGCTTTCGTGCAGGCAAGGATTTGAAGCTGGAGAGGTTGGGGGTTCCGCTAAGAGATAGGCACGATGAGAATTTATTGGATTATTTGGATGCGTGTGTGGATTTTATTGATAAGGGTAGAAAAAAGGGTTCTGTTTTGGTGCATTGCTTTGCTGGTGTTTCCAGAAGTGCATCTATCATTACAGCCTATCTGATGAGAACAGAGCATTTATCACAAGAAGATGCACTAGGATCCCTGAGGCAAAGCTGTGAATTTGTTTGCCCCAATGATGGTTTTCTACATCAGCTCAAAATGTACGAGGAAATGGGCTTCAAGGTTGATCGTGCCAGCCCCATATATAAGTCTTTTCGCTTGAAAGTATTGGGTGAATCTTATCATCATGGGGATAAAATAGACAGTTCTAAATTTGGGGCAGATCCTGGGTTGCCTGGTGAAGTTGCCTCTGGAGTAAAAACAGCTCAAAATGGAGGAAAAACTGGTGCACCAGCATTCCGCTGCAAGAAATGCCGAAGAATTGTTGCATTGCAGGACAATGTTGTTGATCACATTCCAGGCGAGGGTGAGAAATCGTTTGAGTGGCGAAAGCGAAAAAGTAGCAACTTGTCTGAGGATTCTGAATGTTCATCCATTTTTGTTGAGCCTCAAAGGTGGATGACAGCAGTTGATGAAGGAGCACTGGAGGGCAAGGGCAAGTTGTCATGTGCACATTGTGAAGCTCGCTTGGGTTACTTCAATTGGTCAGGCAGCCAATGCAGTTGCGGGAGTTGGATCACTCCTGCCTTCCAGCTTCATAGAAGCCGTGTGGACGTCAGCACTGTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004721 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006109 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008270 GO:0009893 GO:0009987 GO:0010562 GO:0010675 GO:0010676 GO:0010906 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019220 GO:0019222 GO:0019538 GO:0019899 GO:0019900 GO:0031323 GO:0031325 GO:0033131 GO:0033133 GO:0033674 GO:0036211 GO:0042325 GO:0042327 GO:0042578 GO:0043085 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043549 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045913 GO:0045937 GO:0046872 GO:0046914 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0051174 GO:0051338 GO:0051347 GO:0062012 GO:0065007 GO:0065009 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1903299 GO:1903301

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DSPc

Protein Analysis

333

Amino Acids

36.58

Weight (kDa)

7.94

Isoelectric Point (pI)

40.63

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002393)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G18593 AT4G18593
fragaria_vesca	FvH4_7g07280
malus_domestica	MD07G1116400.v1.1 MD12G1096300.v1.1 MD14G1050900.v1.1 MD14G1089400.v1.1
prunus_persica	Prupe.4G082800_v2.0.a1 Prupe.7G034500_v2.0.a1 Prupe.7G034700_v2.0.a1 Prupe.7G035100_v2.0.a1 Prupe.7G035100_v2.0.a1 Prupe.7G035100_v2.0.a1
pyrus_communis	pycom12g08530 pycom14g04220 pycom14g07910 pycom14g07920
rosa_chinensis	RchiOBHm_Chr0c29g0501071 RchiOBHm_Chr1g0337531 RchiOBHm_Chr1g0337541 RchiOBHm_Chr1g0337741 RchiOBHm_Chr1g0337801 RchiOBHm_Chr1g0337841 RchiOBHm_Chr1g0339501
rosa_laevigata	RLG00000029270
rosa_multiflora	Rmu_co8046380.1_g000001 Rmu_sc0002772.1_g000004 Rmu_sc0004249.1_g000004 Rmu_sc0015042.1_g000004
rosa_roxburghii	Rroxscaffold_1G00062660 Rroxscaffold_3G00274530 Rroxscaffold_4G00314210 Rroxscaffold_4G00314240
rosa_rugosa	Rorug01G0135500.1
rosa_samantha	Rh1AG154800 Rh1BG124200 Rh1CG145300 Rh1DG162600 Rh1DG163000
rosa_wichuraiana	Rw1G012640 Rw1G012680 Rw1G012720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	987
AccII	CGCG	2 cut(s)	45, 50
AciI	CCGC	4 cut(s)	43, 224, 670, 936
AclWI	GGATC	4 cut(s)	402, 415, 587, 953
AcsI	RAATTY	3 cut(s)	247, 428, 581
AcyI	GRCGYC	1 cut(s)	984
AdeI	CACNNNGTG	1 cut(s)	887
AfaI	GTAC	1 cut(s)	473
AfiI	CCNNNNNNNGG	2 cut(s)	446, 734
AgsI	TTSAA	4 cut(s)	202, 490, 532, 910
AjnI	CCWGG	3 cut(s)	595, 604, 727
AluBI	AGCT	8 cut(s)	155, 180, 205, 423, 463, 635, 893, 964
AluI	AGCT	8 cut(s)	155, 180, 205, 423, 463, 635, 893, 964
Alw21I	GWGCWC	3 cut(s)	661, 853, 883
Alw44I	GTGCAC	2 cut(s)	657, 879
AlwI	GGATC	4 cut(s)	402, 415, 587, 953
AlwNI	CAGNNNCTG	2 cut(s)	158, 596
ApaLI	GTGCAC	2 cut(s)	657, 879
ApeKI	GCWGC	3 cut(s)	72, 672, 921
ApoI	RAATTY	3 cut(s)	247, 428, 581
Asp700I	GAANNNNTTC	1 cut(s)	26
AsuC2I	CCSGG	1 cut(s)	136
AsuHPI	GGTGA	4 cut(s)	176, 554, 620, 749
AxyI	CCTNAGG	1 cut(s)	413
BaeGI	GKGCMC	2 cut(s)	661, 883
BamHI	GGATCC	1 cut(s)	407
Bbv12I	GWGCWC	3 cut(s)	661, 853, 883
BbvI	GCAGC	3 cut(s)	84, 659, 933
BccI	CCATC	2 cut(s)	161, 440
BceAI	ACGGC	1 cut(s)	960
BciT130I	CCWGG	3 cut(s)	597, 606, 729
BclI	TGATCA	1 cut(s)	718
BcnI	CCSGG	1 cut(s)	136
BfaI	CTAG	1 cut(s)	404
BisI	GCNGC	3 cut(s)	73, 673, 922
BlsI	GCNGC	3 cut(s)	74, 674, 923
Bme1390I	CCNGG	4 cut(s)	136, 597, 606, 729
BmiI	GGNNCC	2 cut(s)	222, 409
BmrFI	CCNGG	4 cut(s)	136, 597, 606, 729
BmsI	GCATC	4 cut(s)	121, 256, 356, 388
BpmI	CTGGAG	3 cut(s)	227, 642, 875
BpuMI	CCSGG	1 cut(s)	136
BsaHI	GRCGYC	1 cut(s)	984
BsaJI	CCNNGG	2 cut(s)	31, 596
Bsc4I	CCNNNNNNNGG	2 cut(s)	446, 734
Bse1I	ACTGG	2 cut(s)	658, 858
Bse21I	CCTNAGG	1 cut(s)	413
Bse3DI	GCAATG	2 cut(s)	319, 698
BseBI	CCWGG	3 cut(s)	597, 606, 729
BseDI	CCNNGG	2 cut(s)	31, 596
BseGI	GGATG	4 cut(s)	39, 271, 800, 834
BseLI	CCNNNNNNNGG	2 cut(s)	446, 734
BseMI	GCAATG	2 cut(s)	319, 698
BseMII	CTCAG	2 cut(s)	404, 774
BseNI	ACTGG	2 cut(s)	658, 858
BseSI	GKGCMC	2 cut(s)	661, 883
BseXI	GCAGC	3 cut(s)	84, 659, 933
BsgI	GTGCAG	1 cut(s)	207
Bsh1236I	CGCG	2 cut(s)	45, 50
BsiHKAI	GWGCWC	3 cut(s)	661, 853, 883
BsiSI	CCGG	1 cut(s)	135
BslI	CCNNNNNNNGG	2 cut(s)	446, 734
BsmI	GAATGC	1 cut(s)	665
Bsp1286I	GDGCHC	3 cut(s)	661, 853, 883
Bsp143I	GATC	6 cut(s)	81, 407, 496, 592, 718, 945
BspACI	CCGC	4 cut(s)	43, 224, 670, 936
BspCNI	CTCAG	2 cut(s)	405, 775
BspFNI	CGCG	2 cut(s)	45, 50
BspLI	GGNNCC	2 cut(s)	222, 409
BspPI	GGATC	4 cut(s)	402, 415, 587, 953
BsrDI	GCAATG	2 cut(s)	319, 698
BsrI	ACTGG	2 cut(s)	658, 858
BssECI	CCNNGG	2 cut(s)	31, 596
BssMI	GATC	6 cut(s)	81, 407, 496, 592, 718, 945
BssNI	GRCGYC	1 cut(s)	984
Bst2UI	CCWGG	3 cut(s)	597, 606, 729
Bst4CI	ACNGT	2 cut(s)	575, 994
BstACI	GRCGYC	1 cut(s)	984
BstAPI	GCANNNNNTGC	2 cut(s)	681, 927
BstC8I	GCNNGC	3 cut(s)	190, 505, 895
BstDEI	CTNAG	3 cut(s)	227, 413, 783
BstF5I	GGATG	4 cut(s)	39, 271, 800, 834
BstFNI	CGCG	2 cut(s)	45, 50
BstKTI	GATC	6 cut(s)	84, 410, 499, 595, 721, 948
BstMBI	GATC	6 cut(s)	81, 407, 496, 592, 718, 945
BstMWI	GCNNNNNNNGC	3 cut(s)	42, 681, 927
BstNI	CCWGG	3 cut(s)	597, 606, 729
BstSCI	CCNGG	4 cut(s)	134, 595, 604, 727
BstSLI	GKGCMC	2 cut(s)	661, 883
BstUI	CGCG	2 cut(s)	45, 50
BstV1I	GCAGC	3 cut(s)	84, 659, 933
BstX2I	RGATCY	2 cut(s)	407, 592
BstYI	RGATCY	2 cut(s)	407, 592
Bsu36I	CCTNAGG	1 cut(s)	413
BtsCI	GGATG	4 cut(s)	39, 271, 800, 834
BtsIMutI	CAGTG	2 cut(s)	851, 990
Cac8I	GCNNGC	3 cut(s)	190, 505, 895
CaiI	CAGNNNCTG	2 cut(s)	158, 596
CseI	GACGC	1 cut(s)	56
Csp6I	GTAC	1 cut(s)	472
CviAII	CATG	2 cut(s)	557, 876
CviQI	GTAC	1 cut(s)	472
DdeI	CTNAG	3 cut(s)	227, 413, 783
DpnI	GATC	6 cut(s)	83, 409, 498, 594, 720, 947
DpnII	GATC	6 cut(s)	81, 407, 496, 592, 718, 945
DraIII	CACNNNGTG	1 cut(s)	887
Eco81I	CCTNAGG	1 cut(s)	413
EcoRII	CCWGG	3 cut(s)	595, 604, 727
FaeI	CATG	2 cut(s)	560, 879
FaiI	YATR	8 cut(s)	90, 129, 512, 514, 516, 558, 877, 969
FatI	CATG	2 cut(s)	556, 875
FauI	CCCGC	1 cut(s)	929
FbaI	TGATCA	1 cut(s)	718
Fnu4HI	GCNGC	3 cut(s)	73, 673, 922
FokI	GGATG	4 cut(s)	26, 278, 787, 841
Fsp4HI	GCNGC	3 cut(s)	73, 673, 922
FspBI	CTAG	1 cut(s)	404
GluI	GCNGC	3 cut(s)	73, 673, 922
GsuI	CTGGAG	3 cut(s)	227, 642, 875
HapII	CCGG	1 cut(s)	135
HgaI	GACGC	1 cut(s)	56
Hin1I	GRCGYC	1 cut(s)	984
Hin1II	CATG	2 cut(s)	560, 879
HindIII	AAGCTT	1 cut(s)	178
HinfI	GANTC	3 cut(s)	22, 545, 788
HpaII	CCGG	1 cut(s)	135
HphI	GGTGA	4 cut(s)	176, 554, 620, 749
Hpy166II	GTNNAC	3 cut(s)	659, 881, 982
Hpy188I	TCNGA	4 cut(s)	65, 369, 784, 793
Hpy188III	TCNNGA	3 cut(s)	17, 339, 621
Hpy8I	GTNNAC	3 cut(s)	659, 881, 982
Hpy99I	CGWCG	1 cut(s)	50
HpyAV	CCTTC	2 cut(s)	839, 967
HpyCH4III	ACNGT	2 cut(s)	575, 994
HpyCH4IV	ACGT	1 cut(s)	984
HpyF10VI	GCNNNNNNNGC	3 cut(s)	42, 681, 927
HpyF3I	CTNAG	3 cut(s)	227, 413, 783
HpySE526I	ACGT	1 cut(s)	984
Hsp92I	GRCGYC	1 cut(s)	984
Hsp92II	CATG	2 cut(s)	560, 879
Ksp22I	TGATCA	1 cut(s)	718
Kzo9I	GATC	6 cut(s)	81, 407, 496, 592, 718, 945
LmnI	GCTCC	1 cut(s)	848
Lsp1109I	GCAGC	3 cut(s)	84, 659, 933
LweI	GCATC	4 cut(s)	121, 256, 356, 388
MaeI	CTAG	1 cut(s)	404
MaeII	ACGT	1 cut(s)	984
MaeIII	GTNAC	1 cut(s)	902
MalI	GATC	6 cut(s)	83, 409, 498, 594, 720, 947
MboI	GATC	6 cut(s)	81, 407, 496, 592, 718, 945
MboII	GAAGA	2 cut(s)	407, 699
MfeI	CAATTG	1 cut(s)	910
MflI	RGATCY	2 cut(s)	407, 592
MhlI	GDGCHC	3 cut(s)	661, 853, 883
MluCI	AATT	6 cut(s)	102, 247, 428, 581, 690, 910
MmeI	TCCRAC	1 cut(s)	923
MroXI	GAANNNNTTC	1 cut(s)	26
MspA1I	CMGCKG	1 cut(s)	672
MspI	CCGG	1 cut(s)	135
MspR9I	CCNGG	4 cut(s)	136, 597, 606, 729
MunI	CAATTG	1 cut(s)	910
Mva1269I	GAATGC	1 cut(s)	665
MvaI	CCWGG	3 cut(s)	597, 606, 729
MvnI	CGCG	2 cut(s)	45, 50
MwoI	GCNNNNNNNGC	3 cut(s)	42, 681, 927
NciI	CCSGG	1 cut(s)	136
NdeII	GATC	6 cut(s)	81, 407, 496, 592, 718, 945
NlaIII	CATG	2 cut(s)	560, 879
NlaIV	GGNNCC	2 cut(s)	222, 409
NmeAIII	GCCGAG	1 cut(s)	12
PctI	GAATGC	1 cut(s)	665
PdmI	GAANNNNTTC	1 cut(s)	26
PfeI	GAWTC	3 cut(s)	22, 545, 788
PkrI	GCNGC	3 cut(s)	74, 674, 923
Psp6I	CCWGG	3 cut(s)	595, 604, 727
PspGI	CCWGG	3 cut(s)	595, 604, 727
PspN4I	GGNNCC	2 cut(s)	222, 409
PstNI	CAGNNNCTG	2 cut(s)	158, 596
PsuI	RGATCY	2 cut(s)	407, 592
RsaI	GTAC	1 cut(s)	473
RsaNI	GTAC	1 cut(s)	472
SatI	GCNGC	3 cut(s)	73, 673, 922
Sau3AI	GATC	6 cut(s)	81, 407, 496, 592, 718, 945
ScrFI	CCNGG	4 cut(s)	136, 597, 606, 729
SduI	GDGCHC	3 cut(s)	661, 853, 883
SfaNI	GCATC	4 cut(s)	121, 256, 356, 388
Sse9I	AATT	6 cut(s)	102, 247, 428, 581, 690, 910
SsiI	CCGC	4 cut(s)	43, 224, 670, 936
SspMI	CTAG	1 cut(s)	404
StyD4I	CCNGG	4 cut(s)	134, 595, 604, 727
TaaI	ACNGT	2 cut(s)	575, 994
TaiI	ACGT	1 cut(s)	987
TaqI	TCGA	1 cut(s)	173
TasI	AATT	6 cut(s)	102, 247, 428, 581, 690, 910
TfiI	GAWTC	3 cut(s)	22, 545, 788
TscAI	CASTG	2 cut(s)	858, 997
TseI	GCWGC	3 cut(s)	72, 672, 921
TspDTI	ATGAA	3 cut(s)	789, 858, 956
TspRI	CASTG	2 cut(s)	858, 997
VneI	GTGCAC	2 cut(s)	657, 879
XapI	RAATTY	3 cut(s)	247, 428, 581
XmnI	GAANNNNTTC	1 cut(s)	26
XspI	CTAG	1 cut(s)	404
ZraI	GACGTC	1 cut(s)	985

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.