Rw1G012720

dual specificity protein phosphatase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Forward (+)
28190492 .. 28206545
16054 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G012720.1

Sequence Viewer

Length: 1005 bp
ATGCCGCACCTAGTTCGCGAGAATCTCTTCATCGGCAACATCACCGACGCCGTCGACGTACTCCAGAACGGCAGCGCCACCGTCACTCATATTCTCTCCGTTCTCAGCTCCGCCTCGATTTCCTTCTTCTCCGAATACAAGAAGGGTCTCACCATCCCCACCAAGGAGATAACCAAGGTCTACGCCGGCGGCGGCGCCTCCGCCTCCGAGGATGGCTCCGGGGGTAAGCTGCTGTACTTGTTGGAATATGCGGGGAAGGATTTGAAGCTGGTGAGAATGGGGGTTCCTGTTAGGGATATGGAGAGTGAGAATTTGCTGGATTATTTGGAGGTGTGTTTGGATTTTATTGATAAGAGTAGAAAAGAGGGGTCTGTTTTGGTGCATTGCTTTGCTGGTGTGTCTAGAAGGCCTGCAGATGCACTAGGATCCCTGCGACAGAGCTGTGAGTTTGTTTGCCCCAATGATGGTTTTCTAAATCAGCTAAAAATGTACGAAGATATGGGCTTCAAGGTTGATCATGCCAGCCCCATATATAAGTCTTTTCGCCTCAAAATATTGGGTGAATCTTATTATCGCGGAGATAAAATAGACAGCTCTAAATTTGGTGCTGATCCTGGTTTGCCCAGTGAAGTTACCTCTCAAGTGGAATCATCTCCAATCGGAGGAAAAAATGGGACATCTGCATTTCGCTGCAAAAAATGCCGAAGACTTGTTGCAGTACAGGATAATGTTGTGGACCACATTCCAGGTCAGGGTGAGACATCTTTTGAATGGCGCAAGCGGAAAAGTAGCAACGATAACAACTTTGAGGATTCTGAATGTTCATCCATATTTGTTGAGCCGCTAAAATGGATGACAGCAGTGGAAGAAGGTGCAATGGAGGGCAAGTTGTCCTGTGCACATTGTGAAGCTCGTCTGGGTTACTTCAACTGGTCAGGCATCCAATGCAGTTGCGGGAGCTGGATCACCCGGCCTTCCAGCTCCATAGAAGCCGAGTGGACATGA

Protein Analysis

334

Amino Acids

36.76

Weight (kDa)

5.65

Isoelectric Point (pI)

44.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DSPc PF00782 90 - 136 1.3e-08 Dual specificity phosphatase, catalytic domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 194
AccI GTMKAC 2 cut(s) 54, 180
AccII CGCG 2 cut(s) 18, 576
AclWI GGATC 4 cut(s) 420, 433, 605, 971
AcsI RAATTY 2 cut(s) 310, 599
AcyI GRCGYC 2 cut(s) 48, 195
AdeI CACNNNGTG 1 cut(s) 905
AfaI GTAC 4 cut(s) 60, 236, 491, 720
AfiI CCNNNNNNNGG 4 cut(s) 163, 464, 662, 752
AgsI TTSAA 4 cut(s) 265, 508, 770, 928
AjnI CCWGG 2 cut(s) 613, 745
AluBI AGCT 9 cut(s) 108, 229, 268, 441, 481, 594, 911, 960, 981
AluI AGCT 9 cut(s) 108, 229, 268, 441, 481, 594, 911, 960, 981
Alw21I GWGCWC 1 cut(s) 901
Alw26I GTCTC 2 cut(s) 152, 752
Alw44I GTGCAC 1 cut(s) 897
AlwI GGATC 4 cut(s) 420, 433, 605, 971
AoxI GGCC 2 cut(s) 407, 971
ApaLI GTGCAC 1 cut(s) 897
ApeKI GCWGC 3 cut(s) 72, 229, 690
ApoI RAATTY 2 cut(s) 310, 599
Asp700I GAANNNNTTC 1 cut(s) 26
AspLEI GCGC 3 cut(s) 77, 197, 777
AspS9I GGNCC 1 cut(s) 736
AsuC2I CCSGG 2 cut(s) 220, 970
AsuHPI GGTGA 6 cut(s) 34, 142, 283, 572, 767, 958
AvaII GGWCC 1 cut(s) 736
BaeGI GKGCMC 1 cut(s) 901
BamHI GGATCC 1 cut(s) 425
BanI GGYRCC 1 cut(s) 194
BbsI GAAGAC 1 cut(s) 712
Bbv12I GWGCWC 1 cut(s) 901
BbvI GCAGC 3 cut(s) 84, 216, 677
BccI CCATC 3 cut(s) 161, 206, 458
BceAI ACGGC 2 cut(s) 35, 85
BcgI CGANNNNNNTGC 1 cut(s) 30
BciT130I CCWGG 2 cut(s) 615, 747
BclI TGATCA 1 cut(s) 514
BcnI CCSGG 2 cut(s) 220, 970
BcoDI GTCTC 2 cut(s) 152, 752
BfaI CTAG 3 cut(s) 11, 402, 422
BfmI CTRYAG 1 cut(s) 411
BfoI RGCGCY 2 cut(s) 78, 198
BisI GCNGC 7 cut(s) 5, 73, 190, 193, 230, 691, 842
BlsI GCNGC 7 cut(s) 6, 74, 191, 194, 231, 692, 843
Bme1390I CCNGG 4 cut(s) 220, 615, 747, 970
Bme18I GGWCC 1 cut(s) 736
BmgT120I GGNCC 1 cut(s) 736
BmiI GGNNCC 4 cut(s) 196, 217, 285, 427
BmrFI CCNGG 4 cut(s) 220, 615, 747, 970
BmrI ACTGGG 1 cut(s) 618
BmsI GCATC 2 cut(s) 406, 948
BmuI ACTGGG 1 cut(s) 618
BpiI GAAGAC 1 cut(s) 712
BplI GAGNNNNNCTC 2 cut(s) 200, 232
BpmI CTGGAG 1 cut(s) 47
BpuEI CTTGAG 1 cut(s) 624
BpuMI CCSGG 2 cut(s) 220, 970
BsaHI GRCGYC 2 cut(s) 48, 195
BsaI GGTCTC 1 cut(s) 152
BsaJI CCNNGG 4 cut(s) 162, 174, 207, 219
BsaXI ACNNNNNCTCC 2 cut(s) 872, 902
Bsc4I CCNNNNNNNGG 4 cut(s) 163, 464, 662, 752
Bse118I RCCGGY 1 cut(s) 185
Bse1I ACTGG 2 cut(s) 624, 935
Bse3DI GCAATG 2 cut(s) 382, 882
BseBI CCWGG 2 cut(s) 615, 747
BseDI CCNNGG 4 cut(s) 162, 174, 207, 219
BseGI GGATG 5 cut(s) 153, 217, 824, 858, 939
BseLI CCNNNNNNNGG 4 cut(s) 163, 464, 662, 752
BseMI GCAATG 2 cut(s) 382, 882
BseMII CTCAG 1 cut(s) 118
BseNI ACTGG 2 cut(s) 624, 935
BseSI GKGCMC 1 cut(s) 901
BseXI GCAGC 3 cut(s) 84, 216, 677
Bsh1236I CGCG 2 cut(s) 18, 576
BshFI GGCC 2 cut(s) 409, 973
BshNI GGYRCC 1 cut(s) 194
BsiHKAI GWGCWC 1 cut(s) 901
BsiSI CCGG 3 cut(s) 186, 219, 970
BslFI GGGAC 1 cut(s) 688
BslI CCNNNNNNNGG 4 cut(s) 163, 464, 662, 752
BsmAI GTCTC 2 cut(s) 152, 752
BsmFI GGGAC 1 cut(s) 688
BsnI GGCC 2 cut(s) 409, 973
Bso31I GGTCTC 1 cut(s) 152
Bsp1286I GDGCHC 1 cut(s) 901
Bsp143I GATC 4 cut(s) 425, 514, 610, 963
Bsp68I TCGCGA 1 cut(s) 18
BspANI GGCC 2 cut(s) 409, 973
BspCNI CTCAG 1 cut(s) 117
BspFNI CGCG 2 cut(s) 18, 576
BspLI GGNNCC 4 cut(s) 196, 217, 285, 427
BspMAI CTGCAG 1 cut(s) 415
BspPI GGATC 4 cut(s) 420, 433, 605, 971
BspT107I GGYRCC 1 cut(s) 194
BspTNI GGTCTC 1 cut(s) 152
BsrDI GCAATG 2 cut(s) 382, 882
BsrFI RCCGGY 1 cut(s) 185
BsrI ACTGG 2 cut(s) 624, 935
BssAI RCCGGY 1 cut(s) 185
BssECI CCNNGG 4 cut(s) 162, 174, 207, 219
BssMI GATC 4 cut(s) 425, 514, 610, 963
BssNI GRCGYC 2 cut(s) 48, 195
BssT1I CCWWGG 2 cut(s) 162, 174
Bst2UI CCWGG 2 cut(s) 615, 747
Bst4CI ACNGT 1 cut(s) 82
Bst6I CTCTTC 1 cut(s) 32
BstACI GRCGYC 2 cut(s) 48, 195
BstAPI GCANNNNNTGC 2 cut(s) 699, 945
BstC8I GCNNGC 4 cut(s) 187, 411, 523, 779
BstDEI CTNAG 1 cut(s) 104
BstF5I GGATG 5 cut(s) 153, 217, 824, 858, 939
BstFNI CGCG 2 cut(s) 18, 576
BstH2I RGCGCY 2 cut(s) 78, 198
BstHHI GCGC 3 cut(s) 77, 197, 777
BstKTI GATC 4 cut(s) 428, 517, 613, 966
BstMAI GTCTC 2 cut(s) 152, 752
BstMBI GATC 4 cut(s) 425, 514, 610, 963
BstMWI GCNNNNNNNGC 2 cut(s) 699, 945
BstNI CCWGG 2 cut(s) 615, 747
BstSCI CCNGG 4 cut(s) 218, 613, 745, 968
BstSFI CTRYAG 1 cut(s) 411
BstSLI GKGCMC 1 cut(s) 901
BstUI CGCG 2 cut(s) 18, 576
BstV1I GCAGC 3 cut(s) 84, 216, 677
BstV2I GAAGAC 1 cut(s) 712
BstX2I RGATCY 1 cut(s) 425
BstYI RGATCY 1 cut(s) 425
BsuRI GGCC 2 cut(s) 409, 973
BtsCI GGATG 5 cut(s) 153, 217, 824, 858, 939
BtsI GCAGTG 1 cut(s) 867
BtsIMutI CAGTG 2 cut(s) 631, 867
BtuMI TCGCGA 1 cut(s) 18
Cac8I GCNNGC 4 cut(s) 187, 411, 523, 779
CfoI GCGC 3 cut(s) 77, 197, 777
Cfr10I RCCGGY 1 cut(s) 185
Cfr13I GGNCC 1 cut(s) 736
CseI GACGC 1 cut(s) 56
Csp6I GTAC 4 cut(s) 59, 235, 490, 719
CviAII CATG 2 cut(s) 518, 1002
CviQI GTAC 4 cut(s) 59, 235, 490, 719
DdeI CTNAG 1 cut(s) 104
DinI GGCGCC 1 cut(s) 196
DpnI GATC 4 cut(s) 427, 516, 612, 965
DpnII GATC 4 cut(s) 425, 514, 610, 963
DraIII CACNNNGTG 1 cut(s) 905
Eam1104I CTCTTC 1 cut(s) 32
EarI CTCTTC 1 cut(s) 32
EciI GGCGGA 2 cut(s) 100, 190
Eco130I CCWWGG 2 cut(s) 162, 174
Eco147I AGGCCT 1 cut(s) 409
Eco31I GGTCTC 1 cut(s) 152
Eco47I GGWCC 1 cut(s) 736
EcoRII CCWGG 2 cut(s) 613, 745
EcoT14I CCWWGG 2 cut(s) 162, 174
EgeI GGCGCC 1 cut(s) 196
EheI GGCGCC 1 cut(s) 196
ErhI CCWWGG 2 cut(s) 162, 174
FaeI CATG 2 cut(s) 521, 1005
FaqI GGGAC 1 cut(s) 688
FatI CATG 2 cut(s) 517, 1001
FauI CCCGC 2 cut(s) 244, 947
FbaI TGATCA 1 cut(s) 514
FblI GTMKAC 2 cut(s) 54, 180
Fnu4HI GCNGC 7 cut(s) 5, 73, 190, 193, 230, 691, 842
FokI GGATG 5 cut(s) 140, 224, 811, 865, 926
Fsp4HI GCNGC 7 cut(s) 5, 73, 190, 193, 230, 691, 842
FspBI CTAG 3 cut(s) 11, 402, 422
GlaI GCGC 3 cut(s) 76, 196, 776
GluI GCNGC 7 cut(s) 5, 73, 190, 193, 230, 691, 842
GsuI CTGGAG 1 cut(s) 47
HaeII RGCGCY 2 cut(s) 78, 198
HaeIII GGCC 2 cut(s) 409, 973
HapII CCGG 3 cut(s) 186, 219, 970
HgaI GACGC 1 cut(s) 56
HhaI GCGC 3 cut(s) 77, 197, 777
Hin1I GRCGYC 2 cut(s) 48, 195
Hin1II CATG 2 cut(s) 521, 1005
Hin6I GCGC 3 cut(s) 75, 195, 775
HinP1I GCGC 3 cut(s) 75, 195, 775
HincII GTYRAC 1 cut(s) 55
HindII GTYRAC 1 cut(s) 55
HinfI GANTC 4 cut(s) 22, 563, 647, 812
HpaII CCGG 3 cut(s) 186, 219, 970
HphI GGTGA 6 cut(s) 34, 142, 283, 572, 767, 958
Hpy166II GTNNAC 5 cut(s) 55, 181, 736, 899, 999
Hpy188I TCNGA 4 cut(s) 133, 208, 662, 817
Hpy188III TCNNGA 3 cut(s) 17, 64, 402
Hpy8I GTNNAC 5 cut(s) 55, 181, 736, 899, 999
Hpy99I CGWCG 3 cut(s) 50, 56, 59
HpyAV CCTTC 6 cut(s) 133, 136, 250, 399, 863, 984
HpyCH4III ACNGT 1 cut(s) 82
HpyCH4IV ACGT 1 cut(s) 57
HpyCH4V TGCA 9 cut(s) 382, 413, 419, 683, 693, 716, 875, 899, 948
HpyF10VI GCNNNNNNNGC 2 cut(s) 699, 945
HpyF3I CTNAG 1 cut(s) 104
HpySE526I ACGT 1 cut(s) 57
Hsp92I GRCGYC 2 cut(s) 48, 195
Hsp92II CATG 2 cut(s) 521, 1005
HspAI GCGC 3 cut(s) 75, 195, 775
KasI GGCGCC 1 cut(s) 194
KroI GCCGGC 1 cut(s) 185
KroNI GCCGGC 1 cut(s) 187
Ksp22I TGATCA 1 cut(s) 514
Kzo9I GATC 4 cut(s) 425, 514, 610, 963
LmnI GCTCC 4 cut(s) 113, 221, 957, 986
Lsp1109I GCAGC 3 cut(s) 84, 216, 677
LweI GCATC 2 cut(s) 406, 948
MaeI CTAG 3 cut(s) 11, 402, 422
MaeII ACGT 1 cut(s) 57
MaeIII GTNAC 3 cut(s) 82, 631, 920
MalI GATC 4 cut(s) 427, 516, 612, 965
MboI GATC 4 cut(s) 425, 514, 610, 963
MboII GAAGA 5 cut(s) 19, 118, 506, 717, 878
MflI RGATCY 1 cut(s) 425
MhlI GDGCHC 1 cut(s) 901
MluCI AATT 2 cut(s) 310, 599
Mly113I GGCGCC 1 cut(s) 195
MmeI TCCRAC 1 cut(s) 222
MreI CGCCGGCG 1 cut(s) 185
MroNI GCCGGC 1 cut(s) 185
MroXI GAANNNNTTC 1 cut(s) 26
MspI CCGG 3 cut(s) 186, 219, 970
MspR9I CCNGG 4 cut(s) 220, 615, 747, 970
MvaI CCWGG 2 cut(s) 615, 747
MvnI CGCG 2 cut(s) 18, 576
MwoI GCNNNNNNNGC 2 cut(s) 699, 945
NaeI GCCGGC 1 cut(s) 187
NarI GGCGCC 1 cut(s) 195
NciI CCSGG 2 cut(s) 220, 970
NdeII GATC 4 cut(s) 425, 514, 610, 963
NgoMIV GCCGGC 1 cut(s) 185
NlaIII CATG 2 cut(s) 521, 1005
NlaIV GGNNCC 4 cut(s) 196, 217, 285, 427
NmuCI GTSAC 1 cut(s) 82
NruI TCGCGA 1 cut(s) 18
PceI AGGCCT 1 cut(s) 409
PcsI WCGNNNNNNNCGW 1 cut(s) 54
PdiI GCCGGC 1 cut(s) 187
PdmI GAANNNNTTC 1 cut(s) 26
PfeI GAWTC 4 cut(s) 22, 563, 647, 812
PflFI GACNNNGTC 1 cut(s) 50
PkrI GCNGC 7 cut(s) 6, 74, 191, 194, 231, 692, 843
PluTI GGCGCC 1 cut(s) 198
Psp6I CCWGG 2 cut(s) 613, 745
PspGI CCWGG 2 cut(s) 613, 745
PspN4I GGNNCC 4 cut(s) 196, 217, 285, 427
PspPI GGNCC 1 cut(s) 736
PstI CTGCAG 1 cut(s) 415
PsuI RGATCY 1 cut(s) 425
PsyI GACNNNGTC 1 cut(s) 50
RruI TCGCGA 1 cut(s) 18
RsaI GTAC 4 cut(s) 60, 236, 491, 720
RsaNI GTAC 4 cut(s) 59, 235, 490, 719
SalI GTCGAC 1 cut(s) 53
SatI GCNGC 7 cut(s) 5, 73, 190, 193, 230, 691, 842
Sau3AI GATC 4 cut(s) 425, 514, 610, 963
Sau96I GGNCC 1 cut(s) 736
ScrFI CCNGG 4 cut(s) 220, 615, 747, 970
SduI GDGCHC 1 cut(s) 901
SfaNI GCATC 2 cut(s) 406, 948
SfcI CTRYAG 1 cut(s) 411
SfoI GGCGCC 1 cut(s) 196
SgrAI CRCCGGYG 1 cut(s) 185
SgrDI CGTCGACG 1 cut(s) 53
SinI GGWCC 1 cut(s) 736
SmlI CTYRAG 1 cut(s) 639
SmoI CTYRAG 1 cut(s) 639
Sse9I AATT 2 cut(s) 310, 599
SseBI AGGCCT 1 cut(s) 409
SspDI GGCGCC 1 cut(s) 194
SspI AATATT 1 cut(s) 555
SspMI CTAG 3 cut(s) 11, 402, 422
StuI AGGCCT 1 cut(s) 409
StyD4I CCNGG 4 cut(s) 218, 613, 745, 968
StyI CCWWGG 2 cut(s) 162, 174
TaaI ACNGT 1 cut(s) 82
TaiI ACGT 1 cut(s) 60
TaqI TCGA 2 cut(s) 54, 116
TasI AATT 2 cut(s) 310, 599
TatI WGTACW 2 cut(s) 234, 718
TauI GCSGC 4 cut(s) 7, 192, 195, 844
TfiI GAWTC 4 cut(s) 22, 563, 647, 812
TscAI CASTG 2 cut(s) 631, 867
TseFI GTSAC 1 cut(s) 82
TseI GCWGC 3 cut(s) 72, 229, 690
Tsp45I GTSAC 1 cut(s) 82
TspDTI ATGAA 2 cut(s) 19, 813
TspGWI ACGGA 1 cut(s) 88
TspRI CASTG 2 cut(s) 631, 867
Tth111I GACNNNGTC 1 cut(s) 50
VneI GTGCAC 1 cut(s) 897
VpaK11BI GGWCC 1 cut(s) 736
XapI RAATTY 2 cut(s) 310, 599
XbaI TCTAGA 1 cut(s) 401
XmiI GTMKAC 2 cut(s) 54, 180
XmnI GAANNNNTTC 1 cut(s) 26
XspI CTAG 3 cut(s) 11, 402, 422
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.