RchiOBHm_Chr1g0337531

dual specificity protein phosphatase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Reverse (-)
29370148 .. 29371254
1107 bp
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UTR
Exon/CDS
Intron
PRQ56542

Sequence Viewer

Length: 165 bp
ATGACAGCAGTGGAAGAAGGTGCAATGGCGGGCAAGTTGTCCTGTGCACATTGTGAAGCTCATCTGGGTTACTTCAACTGGTCAGGCATCCAATGCAGTTGCGGGAGCTGGATCACCCCCGACTTCCAGCTCCATAGAAGCCGAGTGGACATGGGCAGCATCTAA

Protein Analysis

54

Amino Acids

5.89

Weight (kDa)

5.76

Isoelectric Point (pI)

21.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 29, 102
AclWI GGATC 1 cut(s) 119
AdeI CACNNNGTG 1 cut(s) 53
AgsI TTSAA 1 cut(s) 76
AluBI AGCT 3 cut(s) 59, 108, 130
AluI AGCT 3 cut(s) 59, 108, 130
Alw21I GWGCWC 1 cut(s) 49
Alw44I GTGCAC 1 cut(s) 45
AlwI GGATC 1 cut(s) 119
ApaLI GTGCAC 1 cut(s) 45
ApeKI GCWGC 1 cut(s) 156
AsuHPI GGTGA 1 cut(s) 106
BaeGI GKGCMC 1 cut(s) 49
Bbv12I GWGCWC 1 cut(s) 49
BisI GCNGC 1 cut(s) 157
BlsI GCNGC 1 cut(s) 158
BmsI GCATC 1 cut(s) 96
Bse1I ACTGG 1 cut(s) 83
Bse3DI GCAATG 1 cut(s) 30
BseGI GGATG 1 cut(s) 87
BseMI GCAATG 1 cut(s) 30
BseNI ACTGG 1 cut(s) 83
BseSI GKGCMC 1 cut(s) 49
BsiHKAI GWGCWC 1 cut(s) 49
Bsp1286I GDGCHC 1 cut(s) 49
Bsp143I GATC 1 cut(s) 111
BspACI CCGC 2 cut(s) 29, 102
BspPI GGATC 1 cut(s) 119
BsrDI GCAATG 1 cut(s) 30
BsrI ACTGG 1 cut(s) 83
BssMI GATC 1 cut(s) 111
BstAPI GCANNNNNTGC 1 cut(s) 93
BstC8I GCNNGC 1 cut(s) 31
BstF5I GGATG 1 cut(s) 87
BstKTI GATC 1 cut(s) 114
BstMBI GATC 1 cut(s) 111
BstMWI GCNNNNNNNGC 1 cut(s) 93
BstSLI GKGCMC 1 cut(s) 49
BtsCI GGATG 1 cut(s) 87
BtsI GCAGTG 1 cut(s) 15
BtsIMutI CAGTG 1 cut(s) 15
Cac8I GCNNGC 1 cut(s) 31
CviAII CATG 1 cut(s) 151
CviJI RGCY 4 cut(s) 59, 108, 130, 141
CviKI_1 RGCY 4 cut(s) 59, 108, 130, 141
DpnI GATC 1 cut(s) 113
DpnII GATC 1 cut(s) 111
DraIII CACNNNGTG 1 cut(s) 53
FaeI CATG 1 cut(s) 154
FaiI YATR 2 cut(s) 135, 152
FatI CATG 1 cut(s) 150
FauI CCCGC 2 cut(s) 22, 95
Fnu4HI GCNGC 1 cut(s) 157
FokI GGATG 1 cut(s) 74
Fsp4HI GCNGC 1 cut(s) 157
GluI GCNGC 1 cut(s) 157
Hin1II CATG 1 cut(s) 154
HphI GGTGA 1 cut(s) 106
Hpy166II GTNNAC 2 cut(s) 47, 148
Hpy8I GTNNAC 2 cut(s) 47, 148
HpyAV CCTTC 1 cut(s) 11
HpyCH4V TGCA 3 cut(s) 23, 47, 96
HpyF10VI GCNNNNNNNGC 1 cut(s) 93
Hsp92II CATG 1 cut(s) 154
Kzo9I GATC 1 cut(s) 111
LmnI GCTCC 2 cut(s) 105, 135
LpnPI CCDG 6 cut(s) 50, 55, 64, 69, 94, 140
LweI GCATC 1 cut(s) 96
MaeIII GTNAC 1 cut(s) 68
MalI GATC 1 cut(s) 113
MboI GATC 1 cut(s) 111
MboII GAAGA 1 cut(s) 26
MhlI GDGCHC 1 cut(s) 49
MwoI GCNNNNNNNGC 1 cut(s) 93
NdeII GATC 1 cut(s) 111
NlaIII CATG 1 cut(s) 154
PkrI GCNGC 1 cut(s) 158
SatI GCNGC 1 cut(s) 157
Sau3AI GATC 1 cut(s) 111
SduI GDGCHC 1 cut(s) 49
SetI ASST 4 cut(s) 22, 61, 110, 132
SfaNI GCATC 1 cut(s) 96
SsiI CCGC 2 cut(s) 29, 102
TscAI CASTG 1 cut(s) 15
TseI GCWGC 1 cut(s) 156
TspRI CASTG 1 cut(s) 15
VneI GTGCAC 1 cut(s) 45
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.