Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0001992

Physical Location & Seq

Genomic Coordinates Forward (+)

13419222 .. 13422485

Gene Structure 3264 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G105200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 207 bp

ATGCAAACTCAAAAGGTCGACCCTGAGCCCAGCAAATTATCTGACCTGGATTCTGAAACCAGGCAGACTGTTGAAAAGATGATGTTTGATCAGAGACAGAAGCAGATGGGGCTCCTGACCAGTGATGAATTGCAAAAGCAACATATTCTAAAGAAATTCATGTCGGAGCATCCGGAGATGGATTTCTCAAGGGCCAAGATACAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003002 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006457 GO:0006950 GO:0007275 GO:0007389 GO:0008150 GO:0009266 GO:0009408 GO:0009555 GO:0009628 GO:0009653 GO:0009719 GO:0009725 GO:0009735 GO:0009790 GO:0009791 GO:0009880 GO:0009888 GO:0009908 GO:0009965 GO:0009987 GO:0010016 GO:0010033 GO:0010229 GO:0010286 GO:0010450 GO:0022414 GO:0032501 GO:0032502 GO:0035266 GO:0040007 GO:0042221 GO:0044424 GO:0044444 GO:0044464 GO:0048229 GO:0048366 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048444 GO:0048448 GO:0048466 GO:0048507 GO:0048589 GO:0048608 GO:0048731 GO:0048827 GO:0048832 GO:0048833 GO:0048856 GO:0050789 GO:0050793 GO:0050896 GO:0051082 GO:0061458 GO:0065007 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

69

Amino Acids

8.08

Weight (kDa)

6.07

Isoelectric Point (pI)

59.25

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Publication-ready

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Orthologous Genes (Group: OG0001992)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G27890 AT5G53400
fragaria_vesca	FvH4_1g23100 FvH4_1g24630 FvH4_7g31690
malus_domestica	MD01G1220500.v1.1 MD07G1289500.v1.1
prunus_persica	Prupe.2G310800_v2.0.a1 Prupe.7G105200_v2.0.a1
pyrus_communis	pycom01g23010 pycom07g26230
rosa_chinensis	RchiOBHm_Chr1g0380871 RchiOBHm_Chr2g0117791 RchiOBHm_Chr3g0471811
rosa_laevigata	RLG00000018374 RLG00000024126 RLG00000024128 RLG00000026266
rosa_multiflora	Rmu_co8012830.1_g000001 Rmu_sc0002570.1_g000001 Rmu_sc0002962.1_g000016 Rmu_sc0004622.1_g000002 Rmu_sc0005241.1_g000009
rosa_roxburghii	Rroxscaffold_2G00126210 Rroxscaffold_4G00279000 Rroxscaffold_6G00409530 Rroxscaffold_7G00214800
rosa_rugosa	Rorug01G0424600 Rorug01G0424600 Rorug02G0214200 Rorug05G0519100
rosa_samantha	Rh1BG404600 Rh1DG435000 Rh2AG270200 Rh2BG281700 Rh2CG269800 Rh2DG278100 Rh2DG295900 Rh3AG171300 Rh3CG187800 Rh3DG177500
rosa_wichuraiana	Rw1G039130 Rw2G021350 Rw3G016870 Rw3G016890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	18
AccIII	TCCGGA	1 cut(s)	172
AcsI	RAATTY	1 cut(s)	155
AgsI	TTSAA	1 cut(s)	74
AjnI	CCWGG	2 cut(s)	45, 59
Alw26I	GTCTC	1 cut(s)	88
Aor13HI	TCCGGA	1 cut(s)	172
AoxI	GGCC	1 cut(s)	192
ApoI	RAATTY	1 cut(s)	155
AspS9I	GGNCC	1 cut(s)	192
BanII	GRGCYC	2 cut(s)	30, 114
BccI	CCATC	2 cut(s)	100, 172
BciT130I	CCWGG	2 cut(s)	47, 61
BclI	TGATCA	1 cut(s)	88
BcoDI	GTCTC	1 cut(s)	88
Bme1390I	CCNGG	2 cut(s)	47, 61
BmgT120I	GGNCC	1 cut(s)	192
BmiI	GGNNCC	1 cut(s)	113
BmrFI	CCNGG	2 cut(s)	47, 61
BmsI	GCATC	1 cut(s)	178
Bpu10I	CCTNAGC	1 cut(s)	24
BpuEI	CTTGAG	1 cut(s)	172
BsaWI	WCCGGW	1 cut(s)	172
Bse1I	ACTGG	1 cut(s)	120
BseAI	TCCGGA	1 cut(s)	172
BseBI	CCWGG	2 cut(s)	47, 61
BseGI	GGATG	1 cut(s)	169
BseMII	CTCAG	1 cut(s)	15
BseNI	ACTGG	1 cut(s)	120
BseYI	CCCAGC	1 cut(s)	29
BshFI	GGCC	1 cut(s)	194
BsiSI	CCGG	1 cut(s)	173
BsmAI	GTCTC	1 cut(s)	88
BsnI	GGCC	1 cut(s)	194
Bsp1286I	GDGCHC	2 cut(s)	30, 114
Bsp13I	TCCGGA	1 cut(s)	172
Bsp143I	GATC	1 cut(s)	88
BspANI	GGCC	1 cut(s)	194
BspCNI	CTCAG	1 cut(s)	16
BspEI	TCCGGA	1 cut(s)	172
BspLI	GGNNCC	1 cut(s)	113
BsrI	ACTGG	1 cut(s)	120
BssMI	GATC	1 cut(s)	88
Bst2UI	CCWGG	2 cut(s)	47, 61
Bst4CI	ACNGT	2 cut(s)	70, 204
BstDEI	CTNAG	1 cut(s)	24
BstF5I	GGATG	1 cut(s)	169
BstKTI	GATC	1 cut(s)	91
BstMAI	GTCTC	1 cut(s)	88
BstMBI	GATC	1 cut(s)	88
BstMWI	GCNNNNNNNGC	1 cut(s)	109
BstNI	CCWGG	2 cut(s)	47, 61
BstSCI	CCNGG	2 cut(s)	45, 59
BsuRI	GGCC	1 cut(s)	194
BtsCI	GGATG	1 cut(s)	169
BtsIMutI	CAGTG	1 cut(s)	127
Cfr13I	GGNCC	1 cut(s)	192
CviAII	CATG	1 cut(s)	160
CviJI	RGCY	3 cut(s)	28, 112, 194
CviKI_1	RGCY	3 cut(s)	28, 112, 194
DdeI	CTNAG	1 cut(s)	24
DpnI	GATC	1 cut(s)	90
DpnII	GATC	1 cut(s)	88
Eco24I	GRGCYC	2 cut(s)	30, 114
EcoRII	CCWGG	2 cut(s)	45, 59
EcoT38I	GRGCYC	2 cut(s)	30, 114
FaeI	CATG	1 cut(s)	163
FaiI	YATR	2 cut(s)	144, 161
FatI	CATG	1 cut(s)	159
FbaI	TGATCA	1 cut(s)	88
FblI	GTMKAC	1 cut(s)	18
FokI	GGATG	1 cut(s)	156
FriOI	GRGCYC	2 cut(s)	30, 114
GsaI	CCCAGC	1 cut(s)	33
HaeIII	GGCC	1 cut(s)	194
HapII	CCGG	1 cut(s)	173
Hin1II	CATG	1 cut(s)	163
HincII	GTYRAC	1 cut(s)	19
HindII	GTYRAC	1 cut(s)	19
HinfI	GANTC	1 cut(s)	50
HpaII	CCGG	1 cut(s)	173
Hpy166II	GTNNAC	1 cut(s)	19
Hpy188I	TCNGA	4 cut(s)	43, 55, 93, 166
Hpy188III	TCNNGA	2 cut(s)	115, 173
Hpy8I	GTNNAC	1 cut(s)	19
HpyCH4III	ACNGT	2 cut(s)	70, 204
HpyCH4V	TGCA	2 cut(s)	4, 133
HpyF10VI	GCNNNNNNNGC	1 cut(s)	109
HpyF3I	CTNAG	1 cut(s)	24
Hsp92II	CATG	1 cut(s)	163
Kpn2I	TCCGGA	1 cut(s)	172
Ksp22I	TGATCA	1 cut(s)	88
Kzo9I	GATC	1 cut(s)	88
LmnI	GCTCC	2 cut(s)	117, 166
LpnPI	CCDG	9 cut(s)	32, 36, 43, 46, 59, 73, 128, 133, 186
LweI	GCATC	1 cut(s)	178
MalI	GATC	1 cut(s)	90
MboI	GATC	1 cut(s)	88
MhlI	GDGCHC	2 cut(s)	30, 114
MluCI	AATT	3 cut(s)	35, 128, 155
MmeI	TCCRAC	1 cut(s)	144
MroI	TCCGGA	1 cut(s)	172
MspI	CCGG	1 cut(s)	173
MspR9I	CCNGG	2 cut(s)	47, 61
MvaI	CCWGG	2 cut(s)	47, 61
MwoI	GCNNNNNNNGC	1 cut(s)	109
NdeII	GATC	1 cut(s)	88
NlaIII	CATG	1 cut(s)	163
NlaIV	GGNNCC	1 cut(s)	113
PfeI	GAWTC	1 cut(s)	50
Psp6I	CCWGG	2 cut(s)	45, 59
PspFI	CCCAGC	1 cut(s)	29
PspGI	CCWGG	2 cut(s)	45, 59
PspN4I	GGNNCC	1 cut(s)	113
PspPI	GGNCC	1 cut(s)	192
SalI	GTCGAC	1 cut(s)	17
Sau3AI	GATC	1 cut(s)	88
Sau96I	GGNCC	1 cut(s)	192
ScrFI	CCNGG	2 cut(s)	47, 61
SduI	GDGCHC	2 cut(s)	30, 114
SetI	ASST	2 cut(s)	18, 48
SfaNI	GCATC	1 cut(s)	178
SmlI	CTYRAG	1 cut(s)	187
SmoI	CTYRAG	1 cut(s)	187
Sse9I	AATT	3 cut(s)	35, 128, 155
StyD4I	CCNGG	2 cut(s)	45, 59
TaaI	ACNGT	2 cut(s)	70, 204
TaqI	TCGA	1 cut(s)	18
TasI	AATT	3 cut(s)	35, 128, 155
TfiI	GAWTC	1 cut(s)	50
TscAI	CASTG	1 cut(s)	127
TspDTI	ATGAA	2 cut(s)	141, 148
TspRI	CASTG	1 cut(s)	127
XapI	RAATTY	1 cut(s)	155
XmiI	GTMKAC	1 cut(s)	18

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.