Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0001726

Physical Location & Seq

Genomic Coordinates Forward (+)

21439364 .. 21442161

Gene Structure 2798 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G255700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1512 bp

ATGCAATCCAAAACCTCAAGCCTAGCTCCAGCTCTCAACTATTTCCCAACCCTCAAACCCCCACACAAAACTCTAGCTTTCCACCAATTTTCAGTCCTTATCATCACCTTCCTTGCCTATGCTTCGTTTCATGCCTCTAGAAAGCCCCCAAGCATTGTCAAGAGCGTGCTTGGACCCACAATTCAGTCCAATACCAGCTCAGCCGATACGGGGTGGGATCCCTTTAACGGTCCCCATGGTGCCCACAGGCTAGGAGAGCTTGATCTTGCATTTCTTTCTGCGTATTCGATTGGAATGTACTTTGCAGGGCATGTCGGTGATCGGATTGATTTGAGGTTGTTTCTCGTGTTTGGGATGATGTGTAGTGGCATTTTAACAATATTCTTTGGGTTAGGATATTGGTTTGGTGTTCATTTGTTGGGGTACTTTATGGCTGTTCAAGTACTTTGTGGGTTAGTTCAGTCAATTGGGTGGCCTTGTGTGGTAGCAGTAGTGGGAAACTGGTTTGAGAAAGAAAAGAGGGGGTTGATCATGGGGGTCTGGAGTTCACATACCTCAGTTGGAAACATTATTGGTTCAGTTGTGGCGTCTGGGGTTTTGGAATTTGGATGGGGTTGGTCCTTTGTGGTGCCTGGGGTTTTGGTCATTTTGGTAGGCATTTTAGTGTTTTTGTTTCTTCCCGTGAGTCCAGAACACTTGGGATTTGAGTCTTTGGTAAAGGAGATTCAGATGAATGTGGAAGTTAAAGGCATAGAGAATTTGGAGGGAAAAGTGGAATCAGAGGAAGCAGGTCTTCTTGGAACAGAGAATGCAGATGTCAATACAGGTGCAGATTCTTTGGCTGCAATTGGCTTTTTGGAGGCATGGAGGTTACCGGGCGTGGCACCATTTGCTTTCTGCCTATTCTTTTCAAAGCTGGTGTCTTACACTTTCTTGTACTGGTTGCCCTTTTACATAAGGCACACAGCTGTTGCTGGTGTGCATTTGTCACACAAAACTGCTGGGAATCTTTCAGCCATATTTGATATTGGAGGAGTCTTCGGTGGAATTTTAGCTGGATTGATATCTGATATGATTGAAGCTCGAGCTGTAACGTCAATTGCATTTTTGTTGCTTTCGGTTCCGGCCCTTGTTTTCTACCGGGTATATGGAAGCCTATCTATGGTTGCCAACATTCTTTTGATGTTTCTTTCTGGATTGCTGGTGAATGGCCCATATTCACTAATTACCACAGCCGTTGCTGCTGATCTTGGTACCCAGACAGTGATCAGAGGAAATTCCCGTGCATTAGCTACTGTAACTGCAATTATAGATGGTACAGGTTCTGTTGGGGCGGCTCTTGGCCCACTTTTAGCTGGGTATATTTCCACCACAGGGTGGAACAATGTATTTCTTATGCTAATTTTTGCAATTTTCTGTGCAACTTTGTTTTTGATTCGCATTGCGAGAACGGAGATCAAAGGAAATTTGAATGAGGGAAAATGGTCTTTATATAGCGTAGGCACACAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0008150 GO:0042592 GO:0048878 GO:0050801 GO:0055062 GO:0055081 GO:0055083 GO:0065007 GO:0065008 GO:0072505 GO:0072506 GO:0098771

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MFS_1

Protein Analysis

504

Amino Acids

54.02

Weight (kDa)

6.63

Isoelectric Point (pI)

26.18

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001726)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G13100 AT2G13100 AT2G13100 AT2G13100
fragaria_vesca	FvH4_1g01800
malus_domestica	MD02G1013700.v1.1 MD02G1014100.v1.1 MD04G1051200.v1.1 MD15G1160500.v1.1
prunus_persica	Prupe.7G255700_v2.0.a1 Prupe.7G255700_v2.0.a1
pyrus_communis	pycom02g01270 pycom04g04510 pycom15g14430
rosa_chinensis	RchiOBHm_Chr2g0086771 RchiOBHm_Chr4g0393381 RchiOBHm_Chr4g0439391 RchiOBHm_Chr7g0234391
rosa_laevigata	RLG00000015790 RLG00000017046 RLG00000032265 RLG00000033393
rosa_multiflora	Rmu_sc0001981.1_g000056 Rmu_sc0003226.1_g000089 Rmu_sc0005498.1_g000004 Rmu_sc0034546.1_g000001
rosa_roxburghii	Rroxscaffold_2G00154210 Rroxscaffold_3G00261580
rosa_rugosa	Rorug01G0469200 Rorug05G0053100 Rorug05G0053200 Rorug05G0053300
rosa_samantha	Rh1BG358100 Rh2AG021700 Rh2BG021700 Rh2CG022500 Rh2CG022600 Rh2DG022300 Rh3AG088200 Rh4BG042700 Rh5BG362500 Rh6AG178900 Rh6DG482900 Rh7BG011800
rosa_wichuraiana	Rw2G001740 Rw3G005830 Rw5G029340 Rw6G019570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	779
Acc65I	GGTACC	1 cut(s)	1253
AccB1I	GGYRCC	4 cut(s)	239, 628, 883, 1253
AccB7I	CCANNNNNTGG	1 cut(s)	1377
AciI	CCGC	1 cut(s)	1334
AclWI	GGATC	2 cut(s)	212, 225
AcsI	RAATTY	5 cut(s)	602, 757, 1047, 1276, 1465
AcyI	GRCGYC	1 cut(s)	587
AdeI	CACNNNGTG	2 cut(s)	1377, 1509
AfaI	GTAC	6 cut(s)	299, 425, 444, 938, 1255, 1318
AfiI	CCNNNNNNNGG	5 cut(s)	210, 227, 1162, 1374, 1377
AgsI	TTSAA	4 cut(s)	440, 912, 1079, 1471
AjnI	CCWGG	1 cut(s)	631
AlwI	GGATC	2 cut(s)	212, 225
AlwNI	CAGNNNCTG	1 cut(s)	1325
Ama87I	CYCGRG	1 cut(s)	1083
AoxI	GGCC	4 cut(s)	473, 1125, 1210, 1342
ApeKI	GCWGC	2 cut(s)	842, 1241
ApoI	RAATTY	5 cut(s)	602, 757, 1047, 1276, 1465
ArsI	GACNNNNNNTTYG	2 cut(s)	905, 937
Asp718I	GGTACC	1 cut(s)	1253
AspS9I	GGNCC	6 cut(s)	173, 230, 618, 1126, 1211, 1343
AsuC2I	CCSGG	2 cut(s)	876, 1142
AsuHPI	GGTGA	3 cut(s)	97, 329, 1216
AvaI	CYCGRG	1 cut(s)	1083
AvaII	GGWCC	3 cut(s)	173, 230, 618
BaeGI	GKGCMC	1 cut(s)	244
BamHI	GGATCC	1 cut(s)	217
BanI	GGYRCC	4 cut(s)	239, 628, 883, 1253
BauI	CACGAG	1 cut(s)	344
BbsI	GAAGAC	2 cut(s)	785, 1030
BbvI	GCAGC	2 cut(s)	829, 1228
BccI	CCATC	2 cut(s)	603, 1307
BceAI	ACGGC	1 cut(s)	1220
BciT130I	CCWGG	1 cut(s)	633
BclI	TGATCA	2 cut(s)	528, 1266
BcnI	CCSGG	2 cut(s)	876, 1142
BfaI	CTAG	4 cut(s)	23, 74, 138, 251
BfuAI	ACCTGC	1 cut(s)	779
BisI	GCNGC	3 cut(s)	843, 1242, 1335
BlpI	GCTNAGC	1 cut(s)	199
BlsI	GCNGC	3 cut(s)	844, 1243, 1336
BmcAI	AGTACT	1 cut(s)	444
Bme1390I	CCNGG	3 cut(s)	633, 876, 1142
Bme18I	GGWCC	3 cut(s)	173, 230, 618
BmeT110I	CYCGRG	1 cut(s)	1083
BmgT120I	GGNCC	6 cut(s)	173, 230, 618, 1126, 1211, 1343
BmiI	GGNNCC	8 cut(s)	175, 219, 232, 241, 630, 885, 1122, 1255
BmrFI	CCNGG	3 cut(s)	633, 876, 1142
BpiI	GAAGAC	2 cut(s)	785, 1030
BpmI	CTGGAG	2 cut(s)	12, 562
Bpu1102I	GCTNAGC	1 cut(s)	199
BpuMI	CCSGG	2 cut(s)	876, 1142
BsaBI	GATNNNNATC	1 cut(s)	1063
BsaHI	GRCGYC	1 cut(s)	587
BsaJI	CCNNGG	2 cut(s)	235, 632
Bsc4I	CCNNNNNNNGG	5 cut(s)	210, 227, 1162, 1374, 1377
Bse1I	ACTGG	2 cut(s)	506, 944
Bse3DI	GCAATG	1 cut(s)	1440
Bse8I	GATNNNNATC	1 cut(s)	1063
BseBI	CCWGG	1 cut(s)	633
BseDI	CCNNGG	2 cut(s)	235, 632
BseGI	GGATG	2 cut(s)	360, 614
BseJI	GATNNNNATC	1 cut(s)	1063
BseLI	CCNNNNNNNGG	5 cut(s)	210, 227, 1162, 1374, 1377
BseMI	GCAATG	1 cut(s)	1440
BseMII	CTCAG	2 cut(s)	213, 570
BseNI	ACTGG	2 cut(s)	506, 944
BseRI	GAGGAG	1 cut(s)	1047
BseSI	GKGCMC	1 cut(s)	244
BseXI	GCAGC	2 cut(s)	829, 1228
BseYI	CCCAGC	2 cut(s)	1001, 1355
BsgI	GTGCAG	1 cut(s)	849
BshFI	GGCC	4 cut(s)	475, 1127, 1212, 1344
BshNI	GGYRCC	4 cut(s)	239, 628, 883, 1253
BsiHKCI	CYCGRG	1 cut(s)	1083
BsiSI	CCGG	3 cut(s)	875, 1124, 1141
BslFI	GGGAC	1 cut(s)	216
BslI	CCNNNNNNNGG	5 cut(s)	210, 227, 1162, 1374, 1377
BsmFI	GGGAC	1 cut(s)	216
BsmI	GAATGC	1 cut(s)	814
BsnI	GGCC	4 cut(s)	475, 1127, 1212, 1344
BsoBI	CYCGRG	1 cut(s)	1083
Bsp1286I	GDGCHC	1 cut(s)	244
Bsp143I	GATC	7 cut(s)	217, 262, 319, 528, 1246, 1266, 1455
Bsp1720I	GCTNAGC	1 cut(s)	199
Bsp19I	CCATGG	1 cut(s)	235
BspACI	CCGC	1 cut(s)	1334
BspANI	GGCC	4 cut(s)	475, 1127, 1212, 1344
BspCNI	CTCAG	2 cut(s)	212, 569
BspLI	GGNNCC	8 cut(s)	175, 219, 232, 241, 630, 885, 1122, 1255
BspMI	ACCTGC	1 cut(s)	779
BspPI	GGATC	2 cut(s)	212, 225
BspT107I	GGYRCC	4 cut(s)	239, 628, 883, 1253
BsrDI	GCAATG	1 cut(s)	1440
BsrI	ACTGG	2 cut(s)	506, 944
BssECI	CCNNGG	2 cut(s)	235, 632
BssMI	GATC	7 cut(s)	217, 262, 319, 528, 1246, 1266, 1455
BssNI	GRCGYC	1 cut(s)	587
BssSI	CACGAG	1 cut(s)	344
BssT1I	CCWWGG	1 cut(s)	235
Bst2BI	CACGAG	1 cut(s)	344
Bst2UI	CCWGG	1 cut(s)	633
Bst4CI	ACNGT	4 cut(s)	230, 1264, 1297, 1509
BstACI	GRCGYC	1 cut(s)	587
BstAPI	GCANNNNNTGC	1 cut(s)	890
BstC8I	GCNNGC	1 cut(s)	167
BstDEI	CTNAG	2 cut(s)	199, 556
BstDSI	CCRYGG	1 cut(s)	235
BstEII	GGTNACC	1 cut(s)	870
BstF5I	GGATG	2 cut(s)	360, 614
BstKTI	GATC	7 cut(s)	220, 265, 322, 531, 1249, 1269, 1458
BstMBI	GATC	7 cut(s)	217, 262, 319, 528, 1246, 1266, 1455
BstMWI	GCNNNNNNNGC	3 cut(s)	256, 890, 1241
BstNI	CCWGG	1 cut(s)	633
BstNSI	RCATGY	1 cut(s)	314
BstPI	GGTNACC	1 cut(s)	870
BstSCI	CCNGG	3 cut(s)	631, 874, 1140
BstSLI	GKGCMC	1 cut(s)	244
BstV1I	GCAGC	2 cut(s)	829, 1228
BstV2I	GAAGAC	2 cut(s)	785, 1030
BstX2I	RGATCY	1 cut(s)	217
BstYI	RGATCY	1 cut(s)	217
BsuRI	GGCC	4 cut(s)	475, 1127, 1212, 1344
BtgI	CCRYGG	1 cut(s)	235
BtsCI	GGATG	2 cut(s)	360, 614
BtsIMutI	CAGTG	1 cut(s)	1269
BveI	ACCTGC	1 cut(s)	779
Cac8I	GCNNGC	1 cut(s)	167
CaiI	CAGNNNCTG	1 cut(s)	1325
Cfr13I	GGNCC	6 cut(s)	173, 230, 618, 1126, 1211, 1343
CseI	GACGC	1 cut(s)	576
Csp6I	GTAC	6 cut(s)	298, 424, 443, 937, 1254, 1317
CspCI	CAANNNNNGTGG	2 cut(s)	1219, 1254
CviAII	CATG	5 cut(s)	131, 236, 311, 532, 864
CviQI	GTAC	6 cut(s)	298, 424, 443, 937, 1254, 1317
DdeI	CTNAG	2 cut(s)	199, 556
DpnI	GATC	7 cut(s)	219, 264, 321, 530, 1248, 1268, 1457
DpnII	GATC	7 cut(s)	217, 262, 319, 528, 1246, 1266, 1455
DraIII	CACNNNGTG	2 cut(s)	1377, 1509
Eco130I	CCWWGG	1 cut(s)	235
Eco32I	GATATC	1 cut(s)	1065
Eco47I	GGWCC	3 cut(s)	173, 230, 618
Eco88I	CYCGRG	1 cut(s)	1083
Eco91I	GGTNACC	1 cut(s)	870
EcoO65I	GGTNACC	1 cut(s)	870
EcoRII	CCWGG	1 cut(s)	631
EcoRV	GATATC	1 cut(s)	1065
EcoT14I	CCWWGG	1 cut(s)	235
ErhI	CCWWGG	1 cut(s)	235
FaeI	CATG	5 cut(s)	134, 239, 314, 535, 867
FalI	AAGNNNNNCTT	2 cut(s)	777, 809
FaqI	GGGAC	1 cut(s)	216
FatI	CATG	5 cut(s)	130, 235, 310, 531, 863
FbaI	TGATCA	2 cut(s)	528, 1266
Fnu4HI	GCNGC	3 cut(s)	843, 1242, 1335
FokI	GGATG	2 cut(s)	367, 621
Fsp4HI	GCNGC	3 cut(s)	843, 1242, 1335
FspBI	CTAG	4 cut(s)	23, 74, 138, 251
GluI	GCNGC	3 cut(s)	843, 1242, 1335
GsaI	CCCAGC	2 cut(s)	1005, 1359
GsuI	CTGGAG	2 cut(s)	12, 562
HaeIII	GGCC	4 cut(s)	475, 1127, 1212, 1344
HapII	CCGG	3 cut(s)	875, 1124, 1141
HgaI	GACGC	1 cut(s)	576
Hin1I	GRCGYC	1 cut(s)	587
Hin1II	CATG	5 cut(s)	134, 239, 314, 535, 867
HinfI	GANTC	8 cut(s)	685, 707, 724, 776, 833, 1006, 1035, 1435
HpaII	CCGG	3 cut(s)	875, 1124, 1141
HphI	GGTGA	3 cut(s)	97, 329, 1216
Hpy166II	GTNNAC	1 cut(s)	548
Hpy188I	TCNGA	5 cut(s)	324, 729, 781, 1069, 1271
Hpy188III	TCNNGA	5 cut(s)	138, 160, 541, 689, 1194
Hpy8I	GTNNAC	1 cut(s)	548
HpyAV	CCTTC	1 cut(s)	118
HpyCH4III	ACNGT	4 cut(s)	230, 1264, 1297, 1509
HpyCH4IV	ACGT	1 cut(s)	1094
HpyF10VI	GCNNNNNNNGC	3 cut(s)	256, 890, 1241
HpyF3I	CTNAG	2 cut(s)	199, 556
HpySE526I	ACGT	1 cut(s)	1094
Hsp92I	GRCGYC	1 cut(s)	587
Hsp92II	CATG	5 cut(s)	134, 239, 314, 535, 867
KpnI	GGTACC	1 cut(s)	1257
Ksp22I	TGATCA	2 cut(s)	528, 1266
Kzo9I	GATC	7 cut(s)	217, 262, 319, 528, 1246, 1266, 1455
LmnI	GCTCC	1 cut(s)	31
Lsp1109I	GCAGC	2 cut(s)	829, 1228
MaeI	CTAG	4 cut(s)	23, 74, 138, 251
MaeII	ACGT	1 cut(s)	1094
MaeIII	GTNAC	4 cut(s)	870, 987, 1090, 1297
MalI	GATC	7 cut(s)	219, 264, 321, 530, 1248, 1268, 1457
MboI	GATC	7 cut(s)	217, 262, 319, 528, 1246, 1266, 1455
MboII	GAAGA	3 cut(s)	668, 785, 1030
MfeI	CAATTG	3 cut(s)	465, 846, 1098
MflI	RGATCY	1 cut(s)	217
MhlI	GDGCHC	1 cut(s)	244
MlyI	GAGTC	3 cut(s)	694, 716, 1044
MmeI	TCCRAC	1 cut(s)	541
MseI	TTAA	3 cut(s)	225, 374, 744
MslI	CAYNNNNRTG	2 cut(s)	315, 662
MspA1I	CMGCKG	1 cut(s)	968
MspI	CCGG	3 cut(s)	875, 1124, 1141
MspR9I	CCNGG	3 cut(s)	633, 876, 1142
MunI	CAATTG	3 cut(s)	465, 846, 1098
Mva1269I	GAATGC	1 cut(s)	814
MvaI	CCWGG	1 cut(s)	633
MwoI	GCNNNNNNNGC	3 cut(s)	256, 890, 1241
NciI	CCSGG	2 cut(s)	876, 1142
NcoI	CCATGG	1 cut(s)	235
NdeII	GATC	7 cut(s)	217, 262, 319, 528, 1246, 1266, 1455
NlaIII	CATG	5 cut(s)	134, 239, 314, 535, 867
NlaIV	GGNNCC	8 cut(s)	175, 219, 232, 241, 630, 885, 1122, 1255
NmuCI	GTSAC	1 cut(s)	987
NspI	RCATGY	1 cut(s)	314
PaeR7I	CTCGAG	1 cut(s)	1083
PctI	GAATGC	1 cut(s)	814
PfeI	GAWTC	5 cut(s)	724, 776, 833, 1006, 1435
PflMI	CCANNNNNTGG	1 cut(s)	1377
PkrI	GCNGC	3 cut(s)	844, 1243, 1336
PleI	GAGTC	3 cut(s)	693, 715, 1043
PpsI	GAGTC	3 cut(s)	693, 715, 1043
Psp6I	CCWGG	1 cut(s)	631
PspEI	GGTNACC	1 cut(s)	870
PspFI	CCCAGC	2 cut(s)	1001, 1355
PspGI	CCWGG	1 cut(s)	631
PspN4I	GGNNCC	8 cut(s)	175, 219, 232, 241, 630, 885, 1122, 1255
PspPI	GGNCC	6 cut(s)	173, 230, 618, 1126, 1211, 1343
PspXI	VCTCGAGB	1 cut(s)	1083
PstNI	CAGNNNCTG	1 cut(s)	1325
PsuI	RGATCY	1 cut(s)	217
PvuII	CAGCTG	1 cut(s)	968
RsaI	GTAC	6 cut(s)	299, 425, 444, 938, 1255, 1318
RsaNI	GTAC	6 cut(s)	298, 424, 443, 937, 1254, 1317
RseI	CAYNNNNRTG	2 cut(s)	315, 662
SaqAI	TTAA	3 cut(s)	225, 374, 744
SatI	GCNGC	3 cut(s)	843, 1242, 1335
Sau3AI	GATC	7 cut(s)	217, 262, 319, 528, 1246, 1266, 1455
Sau96I	GGNCC	6 cut(s)	173, 230, 618, 1126, 1211, 1343
ScaI	AGTACT	1 cut(s)	444
SchI	GAGTC	3 cut(s)	694, 716, 1044
ScrFI	CCNGG	3 cut(s)	633, 876, 1142
SduI	GDGCHC	1 cut(s)	244
Sfr274I	CTCGAG	1 cut(s)	1083
SinI	GGWCC	3 cut(s)	173, 230, 618
SlaI	CTCGAG	1 cut(s)	1083
SmiMI	CAYNNNNRTG	2 cut(s)	315, 662
SmlI	CTYRAG	2 cut(s)	16, 1083
SmoI	CTYRAG	2 cut(s)	16, 1083
SsiI	CCGC	1 cut(s)	1334
SspI	AATATT	1 cut(s)	381
SspMI	CTAG	4 cut(s)	23, 74, 138, 251
StyD4I	CCNGG	3 cut(s)	631, 874, 1140
StyI	CCWWGG	1 cut(s)	235
TaaI	ACNGT	4 cut(s)	230, 1264, 1297, 1509
TaiI	ACGT	1 cut(s)	1097
TaqI	TCGA	2 cut(s)	287, 1084
TatI	WGTACW	3 cut(s)	297, 442, 936
TauI	GCSGC	1 cut(s)	1337
TfiI	GAWTC	5 cut(s)	724, 776, 833, 1006, 1435
Tru1I	TTAA	3 cut(s)	225, 374, 744
Tru9I	TTAA	3 cut(s)	225, 374, 744
TscAI	CASTG	1 cut(s)	1269
TseFI	GTSAC	1 cut(s)	987
TseI	GCWGC	2 cut(s)	842, 1241
Tsp45I	GTSAC	1 cut(s)	987
TspDTI	ATGAA	3 cut(s)	119, 401, 746
TspGWI	ACGGA	1 cut(s)	1466
TspRI	CASTG	1 cut(s)	1269
Van91I	CCANNNNNTGG	1 cut(s)	1377
VpaK11BI	GGWCC	3 cut(s)	173, 230, 618
XapI	RAATTY	5 cut(s)	602, 757, 1047, 1276, 1465
XbaI	TCTAGA	1 cut(s)	137
XceI	RCATGY	1 cut(s)	314
XhoI	CTCGAG	1 cut(s)	1083
XspI	CTAG	4 cut(s)	23, 74, 138, 251
ZrmI	AGTACT	1 cut(s)	444

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.