Rh2CG022500

glycerol-3-phosphate transporter

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0001726
Physical Location & Seq
Forward (+)
1738480 .. 1739478
999 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG022500.1

Sequence Viewer

Length: 999 bp
ATGGAATCCAAAACCCAATTAGCTCCAGCTCTCAATTTCTTCCCAACCCTAAAACCCCCAAACAAAACCCTAGCTTTCCACCAAATCTCAGTCCTAATCATCACCTTCCTCGCCTACGCTTCCTTCCACGCGTCCAGAAAGCCCCCCAGCATCGTCAAGAGCGTTCTTGGTCCCAAACTCCAGTCCAATTCGAGCTCATTCGACACCGGGTGGGCTCCCTTTAATGGGCCTCAGGGCACCCACAGGCTCGGAGAACTTGATCTTGCATTTCTGTCTGCATATTCTATTGGGATGTATTTTGCAGGGCATGTTGGTGATAGGATTGATCTGAGGTTGTTTCTTGCTTATGGGATGTTGGGGAGTGGAGTTTTGACTTGTCTTTTCGGGTTAGGGTATTGGTGCAATGTGCATATGTTGTGGTATTTTGTGGGTGTGCAAGTTGTGTGTGGGTTGTTTCAGTCGATAGGTTGGCCTTGTGTTGTGGCAGTTGTGGGGAATTGGTTTGGGAAGACGAAGCGGGGGTTGATAATGGGTGTGTGGAGTTCCCATACTTCGGTTGGGAACATTGTTGGATCAGTTATTGCTTCCGGGGTTTTGGAATTTGGGTGGGGTTGGTCGTTTGTTGTGCCTGGACTTTTGGTGATTTTGGTTGGGGGTTTGGTGTTTTTGTTTCTTCCTGTGAGTCCGGAGGACTTGGGGTTTGAGTCTCCCGGGAAGGAAGAGGTTGAGATGAATGTGGAGGTTAATGGTGTGGAGAATGTGGAGAAAGTGGAATCAGAACAAGCTGGGCTACTTAGAGCAGAAAATGTAGATGTTGATGCTGATGCGGAGTCTTTGACTGCAATTGGGTTTTTGGAGGCGTGGAGATTACCGGGTGTTGCACCATTTGCGTTCTGCCTCTTCTTTTCGAAGCTGGTGTCCTACACTTTCCTGTACTGGTTACCTTTCTACTTAAGACACACTGGTAATTCTTCCACTCAGGAGTTTGTCTTTGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0042592 GO:0048878 GO:0050801 GO:0055062 GO:0055081 GO:0055083 GO:0065007 GO:0065008 GO:0072505 GO:0072506 GO:0098771
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MFS_1

Protein Analysis

332

Amino Acids

36.36

Weight (kDa)

5.5

Isoelectric Point (pI)

35.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MFS_1 PF07690 86 - 324 5.7e-33 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 236
AccII CGCG 1 cut(s) 131
AccIII TCCGGA 1 cut(s) 685
AciI CCGC 2 cut(s) 517, 827
AclWI GGATC 1 cut(s) 580
AcsI RAATTY 1 cut(s) 599
AdeI CACNNNGTG 1 cut(s) 210
AfaI GTAC 1 cut(s) 935
AfiI CCNNNNNNNGG 3 cut(s) 224, 225, 553
AflII CTTAAG 1 cut(s) 952
AflIII ACRYGT 1 cut(s) 129
AjnI CCWGG 1 cut(s) 628
AluBI AGCT 6 cut(s) 23, 29, 74, 195, 785, 913
AluI AGCT 6 cut(s) 23, 29, 74, 195, 785, 913
Alw21I GWGCWC 1 cut(s) 197
Alw26I GTCTC 1 cut(s) 711
AlwI GGATC 1 cut(s) 580
Ama87I CYCGRG 1 cut(s) 710
Aor13HI TCCGGA 1 cut(s) 685
AoxI GGCC 2 cut(s) 227, 470
ApoI RAATTY 1 cut(s) 599
ArsI GACNNNNNNTTYG 4 cut(s) 683, 715, 902, 934
AspS9I GGNCC 2 cut(s) 170, 227
AsuC2I CCSGG 5 cut(s) 208, 589, 711, 712, 873
AsuHPI GGTGA 3 cut(s) 94, 326, 652
AsuII TTCGAA 1 cut(s) 908
AvaI CYCGRG 1 cut(s) 710
AvaII GGWCC 1 cut(s) 170
AxyI CCTNAGG 1 cut(s) 231
BaeGI GKGCMC 1 cut(s) 239
BanI GGYRCC 1 cut(s) 236
BanII GRGCYC 2 cut(s) 197, 217
BbsI GAAGAC 1 cut(s) 515
Bbv12I GWGCWC 1 cut(s) 197
BciT130I CCWGG 1 cut(s) 630
BcnI CCSGG 5 cut(s) 208, 589, 711, 712, 873
BcoDI GTCTC 1 cut(s) 711
BfaI CTAG 1 cut(s) 71
BfrI CTTAAG 1 cut(s) 952
Bme1390I CCNGG 6 cut(s) 208, 589, 630, 711, 712, 873
Bme18I GGWCC 1 cut(s) 170
BmeT110I CYCGRG 1 cut(s) 710
BmgT120I GGNCC 2 cut(s) 170, 227
BmiI GGNNCC 3 cut(s) 172, 216, 238
BmrFI CCNGG 6 cut(s) 208, 589, 630, 711, 712, 873
BmsI GCATC 3 cut(s) 159, 808, 814
BpiI GAAGAC 1 cut(s) 515
BpmI CTGGAG 2 cut(s) 9, 164
Bpu14I TTCGAA 1 cut(s) 908
BpuMI CCSGG 5 cut(s) 208, 589, 711, 712, 873
BsaJI CCNNGG 2 cut(s) 588, 710
BsaWI WCCGGW 1 cut(s) 685
Bsc4I CCNNNNNNNGG 3 cut(s) 224, 225, 553
Bse1I ACTGG 3 cut(s) 181, 941, 967
Bse21I CCTNAGG 1 cut(s) 231
Bse3DI GCAATG 1 cut(s) 409
BseAI TCCGGA 1 cut(s) 685
BseBI CCWGG 1 cut(s) 630
BseDI CCNNGG 2 cut(s) 588, 710
BseGI GGATG 2 cut(s) 297, 357
BseLI CCNNNNNNNGG 3 cut(s) 224, 225, 553
BseMI GCAATG 1 cut(s) 409
BseMII CTCAG 4 cut(s) 102, 245, 320, 992
BseNI ACTGG 3 cut(s) 181, 941, 967
BseSI GKGCMC 1 cut(s) 239
BseYI CCCAGC 2 cut(s) 146, 785
Bsh1236I CGCG 1 cut(s) 131
BshFI GGCC 2 cut(s) 229, 472
BshNI GGYRCC 1 cut(s) 236
BsiHKAI GWGCWC 1 cut(s) 197
BsiHKCI CYCGRG 1 cut(s) 710
BsiSI CCGG 5 cut(s) 207, 588, 686, 711, 872
BslFI GGGAC 1 cut(s) 156
BslI CCNNNNNNNGG 3 cut(s) 224, 225, 553
BsmAI GTCTC 1 cut(s) 711
BsmFI GGGAC 1 cut(s) 156
BsnI GGCC 2 cut(s) 229, 472
BsoBI CYCGRG 1 cut(s) 710
Bsp119I TTCGAA 1 cut(s) 908
Bsp1286I GDGCHC 3 cut(s) 197, 217, 239
Bsp13I TCCGGA 1 cut(s) 685
Bsp143I GATC 3 cut(s) 259, 325, 572
BspACI CCGC 2 cut(s) 517, 827
BspANI GGCC 2 cut(s) 229, 472
BspCNI CTCAG 4 cut(s) 101, 244, 321, 991
BspEI TCCGGA 1 cut(s) 685
BspFNI CGCG 1 cut(s) 131
BspLI GGNNCC 3 cut(s) 172, 216, 238
BspPI GGATC 1 cut(s) 580
BspT104I TTCGAA 1 cut(s) 908
BspT107I GGYRCC 1 cut(s) 236
BspTI CTTAAG 1 cut(s) 952
BsrDI GCAATG 1 cut(s) 409
BsrI ACTGG 3 cut(s) 181, 941, 967
BssECI CCNNGG 2 cut(s) 588, 710
BssMI GATC 3 cut(s) 259, 325, 572
Bst2UI CCWGG 1 cut(s) 630
Bst6I CTCTTC 2 cut(s) 714, 905
BstAFI CTTAAG 1 cut(s) 952
BstAPI GCANNNNNTGC 1 cut(s) 887
BstBI TTCGAA 1 cut(s) 908
BstDEI CTNAG 5 cut(s) 88, 231, 329, 794, 978
BstEII GGTNACC 1 cut(s) 939
BstF5I GGATG 2 cut(s) 297, 357
BstFNI CGCG 1 cut(s) 131
BstKTI GATC 3 cut(s) 262, 328, 575
BstMAI GTCTC 1 cut(s) 711
BstMBI GATC 3 cut(s) 259, 325, 572
BstMWI GCNNNNNNNGC 1 cut(s) 887
BstNI CCWGG 1 cut(s) 630
BstNSI RCATGY 1 cut(s) 311
BstPI GGTNACC 1 cut(s) 939
BstSCI CCNGG 6 cut(s) 206, 587, 628, 709, 710, 871
BstSLI GKGCMC 1 cut(s) 239
BstUI CGCG 1 cut(s) 131
BstV2I GAAGAC 1 cut(s) 515
Bsu36I CCTNAGG 1 cut(s) 231
BsuRI GGCC 2 cut(s) 229, 472
BtsCI GGATG 2 cut(s) 297, 357
BtsIMutI CAGTG 1 cut(s) 960
Cfr13I GGNCC 2 cut(s) 170, 227
Cfr9I CCCGGG 1 cut(s) 710
CseI GACGC 1 cut(s) 120
Csp6I GTAC 1 cut(s) 934
CviAII CATG 1 cut(s) 308
CviQI GTAC 1 cut(s) 934
DdeI CTNAG 5 cut(s) 88, 231, 329, 794, 978
DpnI GATC 3 cut(s) 261, 327, 574
DpnII GATC 3 cut(s) 259, 325, 572
DraIII CACNNNGTG 1 cut(s) 210
Eam1104I CTCTTC 2 cut(s) 714, 905
EarI CTCTTC 2 cut(s) 714, 905
Ecl136II GAGCTC 1 cut(s) 195
Eco24I GRGCYC 2 cut(s) 197, 217
Eco47I GGWCC 1 cut(s) 170
Eco53kI GAGCTC 1 cut(s) 195
Eco81I CCTNAGG 1 cut(s) 231
Eco88I CYCGRG 1 cut(s) 710
Eco91I GGTNACC 1 cut(s) 939
EcoICRI GAGCTC 1 cut(s) 195
EcoO65I GGTNACC 1 cut(s) 939
EcoRII CCWGG 1 cut(s) 628
EcoT38I GRGCYC 2 cut(s) 197, 217
FaeI CATG 1 cut(s) 311
FaiI YATR 6 cut(s) 280, 309, 348, 411, 413, 549
FaqI GGGAC 1 cut(s) 156
FatI CATG 1 cut(s) 307
FauI CCCGC 1 cut(s) 510
FauNDI CATATG 1 cut(s) 411
FokI GGATG 2 cut(s) 304, 364
FriOI GRGCYC 2 cut(s) 197, 217
FspBI CTAG 1 cut(s) 71
GsaI CCCAGC 2 cut(s) 150, 789
GsuI CTGGAG 2 cut(s) 9, 164
HaeIII GGCC 2 cut(s) 229, 472
HapII CCGG 5 cut(s) 207, 588, 686, 711, 872
HgaI GACGC 1 cut(s) 120
Hin1II CATG 1 cut(s) 311
HinfI GANTC 5 cut(s) 5, 682, 704, 773, 830
HpaII CCGG 5 cut(s) 207, 588, 686, 711, 872
HphI GGTGA 3 cut(s) 94, 326, 652
Hpy188I TCNGA 3 cut(s) 251, 330, 778
Hpy188III TCNNGA 4 cut(s) 135, 157, 686, 980
HpyAV CCTTC 3 cut(s) 115, 133, 709
HpyCH4V TGCA 8 cut(s) 266, 278, 302, 402, 409, 436, 842, 881
HpyF10VI GCNNNNNNNGC 1 cut(s) 887
HpyF3I CTNAG 5 cut(s) 88, 231, 329, 794, 978
Hsp92II CATG 1 cut(s) 311
Kpn2I TCCGGA 1 cut(s) 685
Kzo9I GATC 3 cut(s) 259, 325, 572
LmnI GCTCC 2 cut(s) 28, 220
LweI GCATC 3 cut(s) 159, 808, 814
MaeI CTAG 1 cut(s) 71
MaeIII GTNAC 1 cut(s) 939
MalI GATC 3 cut(s) 261, 327, 574
MboI GATC 3 cut(s) 259, 325, 572
MboII GAAGA 6 cut(s) 31, 520, 665, 731, 892, 963
MfeI CAATTG 1 cut(s) 843
MhlI GDGCHC 3 cut(s) 197, 217, 239
MluCI AATT 7 cut(s) 17, 34, 187, 496, 599, 843, 967
MluI ACGCGT 1 cut(s) 129
MlyI GAGTC 3 cut(s) 691, 713, 839
MmeI TCCRAC 1 cut(s) 550
MnlI CCTC 8 cut(s) 119, 240, 324, 682, 715, 733, 850, 908
MroI TCCGGA 1 cut(s) 685
MseI TTAA 4 cut(s) 222, 744, 953, 997
MslI CAYNNNNRTG 1 cut(s) 312
MspCI CTTAAG 1 cut(s) 952
MspI CCGG 5 cut(s) 207, 588, 686, 711, 872
MspR9I CCNGG 6 cut(s) 208, 589, 630, 711, 712, 873
MunI CAATTG 1 cut(s) 843
MvaI CCWGG 1 cut(s) 630
MvnI CGCG 1 cut(s) 131
MwoI GCNNNNNNNGC 1 cut(s) 887
NciI CCSGG 5 cut(s) 208, 589, 711, 712, 873
NdeI CATATG 1 cut(s) 411
NdeII GATC 3 cut(s) 259, 325, 572
NlaIII CATG 1 cut(s) 311
NlaIV GGNNCC 3 cut(s) 172, 216, 238
NspI RCATGY 1 cut(s) 311
NspV TTCGAA 1 cut(s) 908
PcsI WCGNNNNNNNCGW 1 cut(s) 159
PfeI GAWTC 2 cut(s) 5, 773
PleI GAGTC 3 cut(s) 690, 712, 838
PpsI GAGTC 3 cut(s) 690, 712, 838
Psp124BI GAGCTC 1 cut(s) 197
Psp6I CCWGG 1 cut(s) 628
PspEI GGTNACC 1 cut(s) 939
PspFI CCCAGC 2 cut(s) 146, 785
PspGI CCWGG 1 cut(s) 628
PspN4I GGNNCC 3 cut(s) 172, 216, 238
PspPI GGNCC 2 cut(s) 170, 227
RsaI GTAC 1 cut(s) 935
RsaNI GTAC 1 cut(s) 934
RseI CAYNNNNRTG 1 cut(s) 312
SacI GAGCTC 1 cut(s) 197
SaqAI TTAA 4 cut(s) 222, 744, 953, 997
Sau3AI GATC 3 cut(s) 259, 325, 572
Sau96I GGNCC 2 cut(s) 170, 227
SchI GAGTC 3 cut(s) 691, 713, 839
ScrFI CCNGG 6 cut(s) 208, 589, 630, 711, 712, 873
SduI GDGCHC 3 cut(s) 197, 217, 239
SfaNI GCATC 3 cut(s) 159, 808, 814
SfuI TTCGAA 1 cut(s) 908
SinI GGWCC 1 cut(s) 170
SmaI CCCGGG 1 cut(s) 712
SmiMI CAYNNNNRTG 1 cut(s) 312
SmlI CTYRAG 1 cut(s) 952
SmoI CTYRAG 1 cut(s) 952
Sse9I AATT 7 cut(s) 17, 34, 187, 496, 599, 843, 967
SsiI CCGC 2 cut(s) 517, 827
SspMI CTAG 1 cut(s) 71
SstI GAGCTC 1 cut(s) 197
StyD4I CCNGG 6 cut(s) 206, 587, 628, 709, 710, 871
TaqI TCGA 4 cut(s) 191, 201, 461, 908
TasI AATT 7 cut(s) 17, 34, 187, 496, 599, 843, 967
TatI WGTACW 1 cut(s) 933
TfiI GAWTC 2 cut(s) 5, 773
Tru1I TTAA 4 cut(s) 222, 744, 953, 997
Tru9I TTAA 4 cut(s) 222, 744, 953, 997
TscAI CASTG 1 cut(s) 967
TspDTI ATGAA 1 cut(s) 746
TspMI CCCGGG 1 cut(s) 710
TspRI CASTG 1 cut(s) 967
Vha464I CTTAAG 1 cut(s) 952
VpaK11BI GGWCC 1 cut(s) 170
XapI RAATTY 1 cut(s) 599
XceI RCATGY 1 cut(s) 311
XcmI CCANNNNNNNNNTGG 1 cut(s) 554
XmaI CCCGGG 1 cut(s) 710
XspI CTAG 1 cut(s) 71
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.