Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0003644

Physical Location & Seq

Genomic Coordinates Forward (+)

10817940 .. 10826705

Gene Structure 8766 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G074100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1101 bp

ATGCCTCTTTCTCCTCCTGGAAGATGGAGAACCTGCATCTTTGCCTCAATGGCTCCGCTACTGCGAGCCCGAAGCTTCAGATCAGACGCAGCGTTAGAAGCTCTGGCCAAAGCCTCTCAAGACAAAGTCCCCAACTTGCTTCTCTACAACTACCCCTCATTCTCTGGAGCTTTCTCTGCCCTCTTCGCTCACCTCTTTCACTCTCGCCTCAACCTCCCTTGTCTCACTCTGCCTTTCTCTTCCGTCGAACCCTTCAGGATTGATGATTTGTGTATTGAAGGGCTGGAGAGATGCTATCTTCTTGATTTTCTTGGCCCAAAAGGATTTGCAGTTAAGTTTGCGCGGAGAGCTTTGTGCGAGGTAATTTCCTTTGATCATCGGAAAAGGGTGCTTCCACAGATACCCTCCGAGGAAGATTGTCCAAAGAACCTCAAATTTCATGTGAATCTTGAAAAGAGTAGCTCTACTGCTGTGTATGACTACTTCTCCACTATACTGGCCGGCAGTGAGTATCATAATGGAATGGATGTAAGTTTATTAGAACCCGAGGACAGAGATCGTGTAGAAATGGTACTTAAGTACATCGAGGACGGAGATCTTCGGCGGTGGAGCTTACCGGATATTAGAGCGTTTAATATTGGACTTAGTGAATGGCGCTCCAAGTTGAATTGTGTTACTAATCCATACATGTACGAACAGTTACTGGATATAAGTGCTGTGGATGCTCTCGCTAAGGGAAACGCTTATAATTCTATTCGCCAGAAAGCTGCAAATAAGTTACTGGATAATGTTTTGAAAGTAAGGTTGGGGAGAGGATTTTATGGGGAGTGTCTGGGAGTTCGAGCTCACGTGAATTCTGAGCTAAGTGATGAAATCGGCAAGCAGCTTAGTGTAAAAAGTGCTGCTGCTGGTCTACGGCCTATAGGAGCTGTTATATTCATGCAGCGGAAAAACCTAAAAATGTGCTTAAGGAGTACTGATAGTTCCACTGATACCTCTGAAGTTGCAAAGGCATATGGAGGAGGAGGCTCGCCAAGTTCTAGTTCCTTTATTATAAGGATGGACGAGTACAATCAGTGGATCTCGGAAAATTCAAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

367

Amino Acids

41.02

Weight (kDa)

8.48

Isoelectric Point (pI)

56.47

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003644)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G09580 AT5G09580
fragaria_vesca	FvH4_1g23320 FvH4_1g23320
malus_domestica	MD10G1056400.v1.1
prunus_persica	Prupe.8G074100_v2.0.a1 Prupe.8G074100_v2.0.a1 Prupe.8G074100_v2.0.a1
pyrus_communis	pycom10g04330 pycom10g04340
rosa_chinensis	RchiOBHm_Chr2g0118131 RchiOBHm_Chr2g0118141 RchiOBHm_Chr2g0118161
rosa_laevigata	RLG00000018394 RLG00000018395 RLG00000018401
rosa_multiflora	Rmu_sc0001618.1_g000003 Rmu_sc0001618.1_g000008 Rmu_sc0001618.1_g000012 Rmu_sc0009463.1_g000001 Rmu_sc0009463.1_g000017
rosa_roxburghii	Rroxscaffold_2G00125850 Rroxscaffold_2G00125900 Rroxscaffold_3G00234990 Rroxscaffold_4G00309060
rosa_rugosa	Rorug02G0216300 Rorug02G0217100
rosa_samantha	Rh2AG273200 Rh2BG285500 Rh2CG410200 Rh6DG346000 Rh7BG104700
rosa_wichuraiana	Rw2G021570 Rw2G021590 Rw2G021610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	747, 1055
Acc36I	ACCTGC	1 cut(s)	41
AccI	GTMKAC	1 cut(s)	913
AccII	CGCG	1 cut(s)	343
AciI	CCGC	4 cut(s)	56, 343, 604, 946
AclWI	GGATC	1 cut(s)	1088
AcoI	YGGCCR	2 cut(s)	105, 498
AcsI	RAATTY	3 cut(s)	434, 853, 1090
AcuI	CTGAAG	3 cut(s)	61, 238, 1020
AcvI	CACGTG	1 cut(s)	850
AfaI	GTAC	5 cut(s)	573, 581, 692, 976, 1070
AflII	CTTAAG	2 cut(s)	575, 967
AflIII	ACRYGT	1 cut(s)	687
AgsI	TTSAA	5 cut(s)	278, 452, 667, 796, 1095
AjnI	CCWGG	1 cut(s)	16
AjuI	GAANNNNNNNTTGG	4 cut(s)	788, 820, 1027, 1059
Alw21I	GWGCWC	1 cut(s)	847
Alw26I	GTCTC	1 cut(s)	227
AlwI	GGATC	1 cut(s)	1088
AlwNI	CAGNNNCTG	1 cut(s)	703
Ama87I	CYCGRG	1 cut(s)	545
AoxI	GGCC	4 cut(s)	105, 313, 498, 917
ApeKI	GCWGC	6 cut(s)	89, 767, 883, 902, 905, 943
ApoI	RAATTY	3 cut(s)	434, 853, 1090
AspLEI	GCGC	2 cut(s)	343, 657
AspS9I	GGNCC	1 cut(s)	314
AsuHPI	GGTGA	1 cut(s)	182
AvaI	CYCGRG	1 cut(s)	545
BaeI	ACNNNNGTAYC	2 cut(s)	563, 596
BalI	TGGCCA	1 cut(s)	107
BanII	GRGCYC	2 cut(s)	70, 847
BarI	GAAGNNNNNNTAC	2 cut(s)	467, 499
BbrPI	CACGTG	1 cut(s)	850
Bbv12I	GWGCWC	1 cut(s)	847
BbvI	GCAGC	6 cut(s)	101, 754, 889, 892, 895, 955
BccI	CCATC	2 cut(s)	18, 1054
BceAI	ACGGC	1 cut(s)	932
BciT130I	CCWGG	1 cut(s)	18
BclI	TGATCA	1 cut(s)	373
BcoDI	GTCTC	1 cut(s)	227
BfaI	CTAG	1 cut(s)	1041
BfmI	CTRYAG	1 cut(s)	921
BfoI	RGCGCY	1 cut(s)	658
BfrI	CTTAAG	2 cut(s)	575, 967
BfuAI	ACCTGC	1 cut(s)	41
BglI	GCCNNNNNGGC	1 cut(s)	50
BglII	AGATCT	1 cut(s)	595
BisI	GCNGC	6 cut(s)	90, 768, 884, 903, 906, 944
BlsI	GCNGC	6 cut(s)	91, 769, 885, 904, 907, 945
BmcAI	AGTACT	1 cut(s)	976
Bme1390I	CCNGG	1 cut(s)	18
BmeT110I	CYCGRG	1 cut(s)	545
BmgT120I	GGNCC	1 cut(s)	314
BmiI	GGNNCC	1 cut(s)	54
BmrFI	CCNGG	1 cut(s)	18
BmsI	GCATC	3 cut(s)	45, 281, 712
BpmI	CTGGAG	2 cut(s)	186, 305
Bpu10I	CCTNAGC	1 cut(s)	732
BpuEI	CTTGAG	1 cut(s)	102
BsaAI	YACGTR	1 cut(s)	850
BsaJI	CCNNGG	2 cut(s)	408, 546
BsaWI	WCCGGW	1 cut(s)	616
BsaXI	ACNNNNNCTCC	2 cut(s)	470, 500
Bse118I	RCCGGY	1 cut(s)	500
Bse1I	ACTGG	3 cut(s)	501, 708, 786
BseBI	CCWGG	1 cut(s)	18
BseDI	CCNNGG	2 cut(s)	408, 546
BseGI	GGATG	3 cut(s)	532, 727, 1065
BseMII	CTCAG	1 cut(s)	849
BseNI	ACTGG	3 cut(s)	501, 708, 786
BseRI	GAGGAG	2 cut(s)	1035, 1038
BseXI	GCAGC	6 cut(s)	101, 754, 889, 892, 895, 955
Bsh1236I	CGCG	1 cut(s)	343
BshFI	GGCC	4 cut(s)	107, 315, 500, 919
BsiHKAI	GWGCWC	1 cut(s)	847
BsiHKCI	CYCGRG	1 cut(s)	545
BsiSI	CCGG	2 cut(s)	501, 617
BslFI	GGGAC	1 cut(s)	113
BsmAI	GTCTC	1 cut(s)	227
BsmFI	GGGAC	1 cut(s)	113
BsnI	GGCC	4 cut(s)	107, 315, 500, 919
BsoBI	CYCGRG	1 cut(s)	545
Bsp1286I	GDGCHC	2 cut(s)	70, 847
Bsp143I	GATC	5 cut(s)	80, 373, 556, 595, 1080
BspACI	CCGC	4 cut(s)	56, 343, 604, 946
BspANI	GGCC	4 cut(s)	107, 315, 500, 919
BspCNI	CTCAG	1 cut(s)	850
BspFNI	CGCG	1 cut(s)	343
BspLI	GGNNCC	1 cut(s)	54
BspMI	ACCTGC	1 cut(s)	41
BspPI	GGATC	1 cut(s)	1088
BspTI	CTTAAG	2 cut(s)	575, 967
BsrFI	RCCGGY	1 cut(s)	500
BsrI	ACTGG	3 cut(s)	501, 708, 786
BssAI	RCCGGY	1 cut(s)	500
BssECI	CCNNGG	2 cut(s)	408, 546
BssMI	GATC	5 cut(s)	80, 373, 556, 595, 1080
Bst2UI	CCWGG	1 cut(s)	18
Bst4CI	ACNGT	1 cut(s)	699
Bst6I	CTCTTC	2 cut(s)	188, 244
BstAFI	CTTAAG	2 cut(s)	575, 967
BstBAI	YACGTR	1 cut(s)	850
BstC8I	GCNNGC	4 cut(s)	66, 502, 881, 1031
BstDEI	CTNAG	5 cut(s)	644, 732, 858, 863, 887
BstF5I	GGATG	3 cut(s)	532, 727, 1065
BstFNI	CGCG	1 cut(s)	343
BstH2I	RGCGCY	1 cut(s)	658
BstHHI	GCGC	2 cut(s)	343, 657
BstKTI	GATC	5 cut(s)	83, 376, 559, 598, 1083
BstMAI	GTCTC	1 cut(s)	227
BstMBI	GATC	5 cut(s)	80, 373, 556, 595, 1080
BstMWI	GCNNNNNNNGC	6 cut(s)	50, 98, 176, 185, 347, 722
BstNI	CCWGG	1 cut(s)	18
BstNSI	RCATGY	1 cut(s)	691
BstSCI	CCNGG	1 cut(s)	16
BstSFI	CTRYAG	1 cut(s)	921
BstUI	CGCG	1 cut(s)	343
BstV1I	GCAGC	6 cut(s)	101, 754, 889, 892, 895, 955
BstX2I	RGATCY	2 cut(s)	595, 1080
BstXI	CCANNNNNNTGG	1 cut(s)	496
BstYI	RGATCY	2 cut(s)	595, 1080
BsuRI	GGCC	4 cut(s)	107, 315, 500, 919
BtsCI	GGATG	3 cut(s)	532, 727, 1065
BtsI	GCAGTG	1 cut(s)	511
BtsIMutI	CAGTG	3 cut(s)	511, 987, 1082
BveI	ACCTGC	1 cut(s)	41
Cac8I	GCNNGC	4 cut(s)	66, 502, 881, 1031
CaiI	CAGNNNCTG	1 cut(s)	703
CfoI	GCGC	2 cut(s)	343, 657
Cfr10I	RCCGGY	1 cut(s)	500
Cfr13I	GGNCC	1 cut(s)	314
CseI	GACGC	1 cut(s)	95
Csp6I	GTAC	5 cut(s)	572, 580, 691, 975, 1069
CviAII	CATG	3 cut(s)	440, 688, 940
CviQI	GTAC	5 cut(s)	572, 580, 691, 975, 1069
DdeI	CTNAG	5 cut(s)	644, 732, 858, 863, 887
DpnI	GATC	5 cut(s)	82, 375, 558, 597, 1082
DpnII	GATC	5 cut(s)	80, 373, 556, 595, 1080
EaeI	YGGCCR	2 cut(s)	105, 498
Eam1104I	CTCTTC	2 cut(s)	188, 244
EarI	CTCTTC	2 cut(s)	188, 244
Ecl136II	GAGCTC	1 cut(s)	845
Eco24I	GRGCYC	2 cut(s)	70, 847
Eco53kI	GAGCTC	1 cut(s)	845
Eco57I	CTGAAG	3 cut(s)	61, 238, 1020
Eco72I	CACGTG	1 cut(s)	850
Eco88I	CYCGRG	1 cut(s)	545
EcoICRI	GAGCTC	1 cut(s)	845
EcoRI	GAATTC	1 cut(s)	853
EcoRII	CCWGG	1 cut(s)	16
EcoT38I	GRGCYC	2 cut(s)	70, 847
FaeI	CATG	3 cut(s)	443, 691, 943
FaqI	GGGAC	1 cut(s)	113
FatI	CATG	3 cut(s)	439, 687, 939
FauNDI	CATATG	1 cut(s)	1015
FbaI	TGATCA	1 cut(s)	373
FblI	GTMKAC	1 cut(s)	913
Fnu4HI	GCNGC	6 cut(s)	90, 768, 884, 903, 906, 944
FokI	GGATG	3 cut(s)	539, 734, 1072
FriOI	GRGCYC	2 cut(s)	70, 847
Fsp4HI	GCNGC	6 cut(s)	90, 768, 884, 903, 906, 944
FspBI	CTAG	1 cut(s)	1041
GlaI	GCGC	2 cut(s)	342, 656
GluI	GCNGC	6 cut(s)	90, 768, 884, 903, 906, 944
GsuI	CTGGAG	2 cut(s)	186, 305
HaeII	RGCGCY	1 cut(s)	658
HaeIII	GGCC	4 cut(s)	107, 315, 500, 919
HapII	CCGG	2 cut(s)	501, 617
HgaI	GACGC	1 cut(s)	95
HhaI	GCGC	2 cut(s)	343, 657
Hin1II	CATG	3 cut(s)	443, 691, 943
Hin6I	GCGC	2 cut(s)	341, 655
HinP1I	GCGC	2 cut(s)	341, 655
HindIII	AAGCTT	1 cut(s)	73
HinfI	GANTC	1 cut(s)	445
HpaII	CCGG	2 cut(s)	501, 617
HphI	GGTGA	1 cut(s)	182
Hpy166II	GTNNAC	1 cut(s)	914
Hpy188I	TCNGA	7 cut(s)	80, 85, 381, 409, 859, 1000, 1087
Hpy188III	TCNNGA	6 cut(s)	119, 165, 256, 302, 449, 1095
Hpy8I	GTNNAC	1 cut(s)	914
Hpy99I	CGWCG	1 cut(s)	248
HpyAV	CCTTC	2 cut(s)	262, 272
HpyCH4III	ACNGT	1 cut(s)	699
HpyCH4IV	ACGT	1 cut(s)	849
HpyCH4V	TGCA	5 cut(s)	36, 329, 770, 943, 1007
HpyF10VI	GCNNNNNNNGC	6 cut(s)	50, 98, 176, 185, 347, 722
HpyF3I	CTNAG	5 cut(s)	644, 732, 858, 863, 887
HpySE526I	ACGT	1 cut(s)	849
Hsp92II	CATG	3 cut(s)	443, 691, 943
HspAI	GCGC	2 cut(s)	341, 655
KroI	GCCGGC	1 cut(s)	500
KroNI	GCCGGC	1 cut(s)	502
Ksp22I	TGATCA	1 cut(s)	373
Kzo9I	GATC	5 cut(s)	80, 373, 556, 595, 1080
LmnI	GCTCC	5 cut(s)	58, 167, 609, 662, 926
Lsp1109I	GCAGC	6 cut(s)	101, 754, 889, 892, 895, 955
LweI	GCATC	3 cut(s)	45, 281, 712
MaeI	CTAG	1 cut(s)	1041
MaeII	ACGT	1 cut(s)	849
MaeIII	GTNAC	3 cut(s)	673, 699, 777
MalI	GATC	5 cut(s)	82, 375, 558, 597, 1082
MboI	GATC	5 cut(s)	80, 373, 556, 595, 1080
MboII	GAAGA	6 cut(s)	33, 175, 231, 290, 425, 590
MflI	RGATCY	2 cut(s)	595, 1080
MhlI	GDGCHC	2 cut(s)	70, 847
MlsI	TGGCCA	1 cut(s)	107
MluCI	AATT	6 cut(s)	363, 434, 667, 748, 853, 1090
MluNI	TGGCCA	1 cut(s)	107
Mox20I	TGGCCA	1 cut(s)	107
MroNI	GCCGGC	1 cut(s)	500
MscI	TGGCCA	1 cut(s)	107
MseI	TTAA	4 cut(s)	333, 576, 633, 968
Msp20I	TGGCCA	1 cut(s)	107
MspA1I	CMGCKG	1 cut(s)	946
MspCI	CTTAAG	2 cut(s)	575, 967
MspI	CCGG	2 cut(s)	501, 617
MspR9I	CCNGG	1 cut(s)	18
MvaI	CCWGG	1 cut(s)	18
MvnI	CGCG	1 cut(s)	343
MwoI	GCNNNNNNNGC	6 cut(s)	50, 98, 176, 185, 347, 722
NaeI	GCCGGC	1 cut(s)	502
NdeI	CATATG	1 cut(s)	1015
NdeII	GATC	5 cut(s)	80, 373, 556, 595, 1080
NgoMIV	GCCGGC	1 cut(s)	500
NlaIII	CATG	3 cut(s)	443, 691, 943
NlaIV	GGNNCC	1 cut(s)	54
NspI	RCATGY	1 cut(s)	691
PciI	ACATGT	1 cut(s)	687
PdiI	GCCGGC	1 cut(s)	502
PfeI	GAWTC	1 cut(s)	445
PflFI	GACNNNGTC	1 cut(s)	125
PfoI	TCCNGGA	1 cut(s)	16
PkrI	GCNGC	6 cut(s)	91, 769, 885, 904, 907, 945
PmaCI	CACGTG	1 cut(s)	850
PmlI	CACGTG	1 cut(s)	850
Ppu21I	YACGTR	1 cut(s)	850
PscI	ACATGT	1 cut(s)	687
PsiI	TTATAA	2 cut(s)	747, 1055
Psp124BI	GAGCTC	1 cut(s)	847
Psp6I	CCWGG	1 cut(s)	16
PspCI	CACGTG	1 cut(s)	850
PspGI	CCWGG	1 cut(s)	16
PspN4I	GGNNCC	1 cut(s)	54
PspPI	GGNCC	1 cut(s)	314
PsrI	GAACNNNNNNTAC	2 cut(s)	967, 999
PstNI	CAGNNNCTG	1 cut(s)	703
PsuI	RGATCY	2 cut(s)	595, 1080
PsyI	GACNNNGTC	1 cut(s)	125
RsaI	GTAC	5 cut(s)	573, 581, 692, 976, 1070
RsaNI	GTAC	5 cut(s)	572, 580, 691, 975, 1069
SacI	GAGCTC	1 cut(s)	847
SaqAI	TTAA	4 cut(s)	333, 576, 633, 968
SatI	GCNGC	6 cut(s)	90, 768, 884, 903, 906, 944
Sau3AI	GATC	5 cut(s)	80, 373, 556, 595, 1080
Sau96I	GGNCC	1 cut(s)	314
ScaI	AGTACT	1 cut(s)	976
ScrFI	CCNGG	1 cut(s)	18
SduI	GDGCHC	2 cut(s)	70, 847
SfaNI	GCATC	3 cut(s)	45, 281, 712
SfcI	CTRYAG	1 cut(s)	921
SmlI	CTYRAG	3 cut(s)	117, 575, 967
SmoI	CTYRAG	3 cut(s)	117, 575, 967
Sse9I	AATT	6 cut(s)	363, 434, 667, 748, 853, 1090
SsiI	CCGC	4 cut(s)	56, 343, 604, 946
SspI	AATATT	1 cut(s)	637
SspMI	CTAG	1 cut(s)	1041
SstI	GAGCTC	1 cut(s)	847
StyD4I	CCNGG	1 cut(s)	16
TaaI	ACNGT	1 cut(s)	699
TaiI	ACGT	1 cut(s)	852
TaqI	TCGA	3 cut(s)	246, 585, 841
TasI	AATT	6 cut(s)	363, 434, 667, 748, 853, 1090
TatI	WGTACW	3 cut(s)	579, 974, 1068
TfiI	GAWTC	1 cut(s)	445
Tru1I	TTAA	4 cut(s)	333, 576, 633, 968
Tru9I	TTAA	4 cut(s)	333, 576, 633, 968
TscAI	CASTG	3 cut(s)	511, 994, 1082
TseI	GCWGC	6 cut(s)	89, 767, 883, 902, 905, 943
TspDTI	ATGAA	3 cut(s)	428, 885, 928
TspGWI	ACGGA	2 cut(s)	232, 606
TspRI	CASTG	3 cut(s)	511, 994, 1082
Tth111I	GACNNNGTC	1 cut(s)	125
Vha464I	CTTAAG	2 cut(s)	575, 967
XapI	RAATTY	3 cut(s)	434, 853, 1090
XceI	RCATGY	1 cut(s)	691
XmiI	GTMKAC	1 cut(s)	913
XspI	CTAG	1 cut(s)	1041
ZrmI	AGTACT	1 cut(s)	976

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.