Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0002583

Physical Location & Seq

Genomic Coordinates Forward (+)

14351752 .. 14353803

Gene Structure 2052 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G116400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 999 bp

ATGACTCACAAAATCATCTCCTACTTCACTTTTTCTTTATGTTTACTCTTGTCTTTGTCTCCCTTTGTTCATATGCATCCATTTGCTTATAGCCAGCTTGATTACAATTTCTACGACAGATCATGCCCCCGCTTATCAATGATTGTTAGGTACAATTTGTGGGCAGCAATCAGGAATGACACCAGGATGGCCGCATCCCTTCTTCGGATGCATTTTCACGATTGTATCGTCAATGGGTGTGACGGCTCAGTGCTTCTTGATGACACAGAAGACTTTAAGGGCGAGAAGAATGCATTGCCAAATCGTAAGTCACTTCGGGGTTTCGAAGTGATTGACAATATAAAGGCAGATGTTGAGAGATTTTGCCCATCGACTGTTTCGTGTGCTGATATTTTGACTCTTGCAGCAAGAGAAGCTGTTGGCCTGGCAGGAGGGCCTTTTTGGCCTGTTCCATTGGGCAGAAGAGATGGAACAACTGCAAGTGAGAAGGCAGTTACTGAACAACTACCATCACCTATTGAGCCTTTAGAGAATATCACTGCCAAGTTCACATCAAAGGGTCTTGACATAAAAGATGTTGTAGTCCTCTCAGGTGGACATACTCTAGGATTTGCTCAATGCTTCACCTTCAAGAGAAGACTCTTCGACTTCGACGGCTCTGGCAATCCTGACCCAACACTTGATTCTTCAGCCCTTACAAACTTGAGAAGCATATGTCCCAAAAAAGATTCAGCAAACAGCAATCTTGCTCCTCTTGATTCCACTAATCTCAGATTTGACAATGCCTATTACACAAACCTGGTTAGCAACACAGGTCTTCTAGAATCTGATCAGGCATTGGTAAAGGATCCAAATACTGCTGCAATGGTTAATTCTTATAGTGCAAACCATTTTCTTTTCTCTAATGACTTTGCTGCATCAATGGTGAAGCTTGGTAATGTTGGAGTATTGACTGGGAAAGATGGGCAAATAAGGAAGAAATGTGGATCTGTGAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00940 ko01100 ko01110 map00940 map01100 map01110

Pfam Domains

Protein Families

peroxidase

Protein Analysis

333

Amino Acids

36.47

Weight (kDa)

6.65

Isoelectric Point (pI)

40.75

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002583)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G49570
fragaria_vesca	FvH4_1g15550 FvH4_1g15551 FvH4_1g15551 FvH4_2g06860
malus_domestica	MD02G1167700.v1.1 MD05G1075100.v1.1 MD15G1279900.v1.1
prunus_persica	Prupe.7G137500_v2.0.a1 Prupe.8G116400_v2.0.a1
pyrus_communis	pycom05g06820
rosa_chinensis	RchiOBHm_Chr2g0104851 RchiOBHm_Chr2g0104861 RchiOBHm_Chr6g0259161
rosa_laevigata	RLG00000014552 RLG00000017363 RLG00000017364
rosa_multiflora	Rmu_co8495059.1_g000001 Rmu_sc0003419.1_g000019 Rmu_sc0003419.1_g000021 Rmu_sc0004862.1_g000021
rosa_roxburghii	Rroxscaffold_2G00138710 Rroxscaffold_2G00138720 Rroxscaffold_7G00206470
rosa_rugosa	Rorug02G0123500 Rorug05G0585300
rosa_samantha	Rh2AG173600 Rh2AG173800 Rh2BG181200 Rh2BG181400 Rh2CG178600 Rh2CG178700 Rh2DG179800 Rh2DG180000 Rh6AG102300 Rh6CG091700 Rh6DG085700
rosa_wichuraiana	Rw2G013660 Rw2G013670 Rw6G008840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	2 cut(s)	130, 192
AclWI	GGATC	3 cut(s)	842, 855, 994
AcoI	YGGCCR	1 cut(s)	189
AcuI	CTGAAG	1 cut(s)	672
AfaI	GTAC	1 cut(s)	152
AfiI	CCNNNNNNNGG	1 cut(s)	204
AgsI	TTSAA	1 cut(s)	631
AjnI	CCWGG	3 cut(s)	182, 423, 798
AjuI	GAANNNNNNNTTGG	2 cut(s)	667, 699
AluBI	AGCT	3 cut(s)	97, 416, 931
AluI	AGCT	3 cut(s)	97, 416, 931
Alw26I	GTCTC	1 cut(s)	63
AlwI	GGATC	3 cut(s)	842, 855, 994
AlwNI	CAGNNNCTG	1 cut(s)	497
AoxI	GGCC	4 cut(s)	189, 421, 434, 443
ApeKI	GCWGC	4 cut(s)	164, 404, 860, 914
ArsI	GACNNNNNNTTYG	2 cut(s)	293, 325
AspS9I	GGNCC	1 cut(s)	434
AsuHPI	GGTGA	3 cut(s)	504, 616, 937
AsuII	TTCGAA	1 cut(s)	324
BaeI	ACNNNNGTAYC	2 cut(s)	208, 241
BamHI	GGATCC	1 cut(s)	847
BbsI	GAAGAC	3 cut(s)	276, 643, 809
BbvI	GCAGC	4 cut(s)	176, 416, 847, 901
BccI	CCATC	5 cut(s)	181, 376, 461, 517, 956
BceAI	ACGGC	2 cut(s)	259, 670
BcgI	CGANNNNNNTGC	2 cut(s)	272, 306
BciT130I	CCWGG	3 cut(s)	184, 425, 800
BclI	TGATCA	1 cut(s)	829
BcoDI	GTCTC	1 cut(s)	63
BfaI	CTAG	2 cut(s)	605, 821
BglI	GCCNNNNNGGC	1 cut(s)	442
BisI	GCNGC	5 cut(s)	165, 192, 405, 861, 915
BlsI	GCNGC	5 cut(s)	166, 193, 406, 862, 916
Bme1390I	CCNGG	3 cut(s)	184, 425, 800
BmgT120I	GGNCC	1 cut(s)	434
BmiI	GGNNCC	1 cut(s)	849
BmrFI	CCNGG	3 cut(s)	184, 425, 800
BmrI	ACTGGG	1 cut(s)	963
BmsI	GCATC	4 cut(s)	85, 198, 203, 926
BmuI	ACTGGG	1 cut(s)	963
BpiI	GAAGAC	3 cut(s)	276, 643, 809
Bpu14I	TTCGAA	1 cut(s)	324
BpuEI	CTTGAG	1 cut(s)	724
Bsc4I	CCNNNNNNNGG	1 cut(s)	204
Bse1I	ACTGG	1 cut(s)	958
Bse3DI	GCAATG	2 cut(s)	293, 870
BseBI	CCWGG	3 cut(s)	184, 425, 800
BseGI	GGATG	4 cut(s)	76, 192, 194, 213
BseLI	CCNNNNNNNGG	1 cut(s)	204
BseMI	GCAATG	2 cut(s)	293, 870
BseMII	CTCAG	3 cut(s)	261, 603, 784
BseNI	ACTGG	1 cut(s)	958
BseRI	GAGGAG	1 cut(s)	741
BseXI	GCAGC	4 cut(s)	176, 416, 847, 901
BshFI	GGCC	4 cut(s)	191, 423, 436, 445
BslFI	GGGAC	1 cut(s)	702
BslI	CCNNNNNNNGG	1 cut(s)	204
BsmAI	GTCTC	1 cut(s)	63
BsmFI	GGGAC	1 cut(s)	702
BsmI	GAATGC	1 cut(s)	295
BsnI	GGCC	4 cut(s)	191, 423, 436, 445
Bsp119I	TTCGAA	1 cut(s)	324
Bsp143I	GATC	4 cut(s)	119, 829, 847, 986
BspACI	CCGC	2 cut(s)	130, 192
BspANI	GGCC	4 cut(s)	191, 423, 436, 445
BspCNI	CTCAG	3 cut(s)	260, 602, 783
BspLI	GGNNCC	1 cut(s)	849
BspPI	GGATC	3 cut(s)	842, 855, 994
BspT104I	TTCGAA	1 cut(s)	324
BsrDI	GCAATG	2 cut(s)	293, 870
BsrI	ACTGG	1 cut(s)	958
BssMI	GATC	4 cut(s)	119, 829, 847, 986
Bst2UI	CCWGG	3 cut(s)	184, 425, 800
Bst4CI	ACNGT	1 cut(s)	376
Bst6I	CTCTTC	2 cut(s)	457, 647
BstBI	TTCGAA	1 cut(s)	324
BstC8I	GCNNGC	1 cut(s)	95
BstDEI	CTNAG	3 cut(s)	247, 589, 770
BstF5I	GGATG	4 cut(s)	76, 192, 194, 213
BstKTI	GATC	4 cut(s)	122, 832, 850, 989
BstMAI	GTCTC	1 cut(s)	63
BstMBI	GATC	4 cut(s)	119, 829, 847, 986
BstMWI	GCNNNNNNNGC	2 cut(s)	413, 442
BstNI	CCWGG	3 cut(s)	184, 425, 800
BstSCI	CCNGG	3 cut(s)	182, 423, 798
BstV1I	GCAGC	4 cut(s)	176, 416, 847, 901
BstV2I	GAAGAC	3 cut(s)	276, 643, 809
BstX2I	RGATCY	2 cut(s)	847, 986
BstYI	RGATCY	2 cut(s)	847, 986
BsuRI	GGCC	4 cut(s)	191, 423, 436, 445
BtsCI	GGATG	4 cut(s)	76, 192, 194, 213
BtsI	GCAGTG	1 cut(s)	537
BtsIMutI	CAGTG	2 cut(s)	255, 537
Cac8I	GCNNGC	1 cut(s)	95
CaiI	CAGNNNCTG	1 cut(s)	497
Cfr13I	GGNCC	1 cut(s)	434
CsiI	ACCWGGT	1 cut(s)	798
Csp6I	GTAC	1 cut(s)	151
CviAII	CATG	1 cut(s)	123
CviQI	GTAC	1 cut(s)	151
DdeI	CTNAG	3 cut(s)	247, 589, 770
DpnI	GATC	4 cut(s)	121, 831, 849, 988
DpnII	GATC	4 cut(s)	119, 829, 847, 986
EaeI	YGGCCR	1 cut(s)	189
Eam1104I	CTCTTC	2 cut(s)	457, 647
EarI	CTCTTC	2 cut(s)	457, 647
Eco57I	CTGAAG	1 cut(s)	672
EcoO109I	RGGNCCY	1 cut(s)	434
EcoRII	CCWGG	3 cut(s)	182, 423, 798
EcoT22I	ATGCAT	3 cut(s)	78, 213, 295
FaeI	CATG	1 cut(s)	126
FaqI	GGGAC	1 cut(s)	702
FatI	CATG	1 cut(s)	122
FauI	CCCGC	1 cut(s)	137
FauNDI	CATATG	2 cut(s)	72, 713
FbaI	TGATCA	1 cut(s)	829
Fnu4HI	GCNGC	5 cut(s)	165, 192, 405, 861, 915
FokI	GGATG	4 cut(s)	63, 181, 199, 220
Fsp4HI	GCNGC	5 cut(s)	165, 192, 405, 861, 915
FspBI	CTAG	2 cut(s)	605, 821
GluI	GCNGC	5 cut(s)	165, 192, 405, 861, 915
HaeIII	GGCC	4 cut(s)	191, 423, 436, 445
Hin1II	CATG	1 cut(s)	126
HindIII	AAGCTT	1 cut(s)	929
HinfI	GANTC	7 cut(s)	4, 397, 639, 683, 728, 758, 824
HphI	GGTGA	3 cut(s)	504, 616, 937
Hpy166II	GTNNAC	4 cut(s)	44, 549, 596, 994
Hpy188I	TCNGA	3 cut(s)	207, 773, 829
Hpy188III	TCNNGA	8 cut(s)	172, 218, 257, 563, 631, 668, 755, 821
Hpy8I	GTNNAC	4 cut(s)	44, 549, 596, 994
Hpy99I	CGWCG	1 cut(s)	656
HpyAV	CCTTC	3 cut(s)	209, 481, 637
HpyCH4III	ACNGT	1 cut(s)	376
HpyCH4V	TGCA	8 cut(s)	76, 211, 293, 404, 479, 863, 884, 917
HpyF10VI	GCNNNNNNNGC	2 cut(s)	413, 442
HpyF3I	CTNAG	3 cut(s)	247, 589, 770
Hsp92II	CATG	1 cut(s)	126
Ksp22I	TGATCA	1 cut(s)	829
Kzo9I	GATC	4 cut(s)	119, 829, 847, 986
LmnI	GCTCC	1 cut(s)	754
Lsp1109I	GCAGC	4 cut(s)	176, 416, 847, 901
LweI	GCATC	4 cut(s)	85, 198, 203, 926
MabI	ACCWGGT	1 cut(s)	798
MaeI	CTAG	2 cut(s)	605, 821
MaeIII	GTNAC	3 cut(s)	239, 309, 493
MalI	GATC	4 cut(s)	121, 831, 849, 988
MboI	GATC	4 cut(s)	119, 829, 847, 986
MboII	GAAGA	9 cut(s)	194, 281, 298, 474, 634, 648, 678, 809, 988
MflI	RGATCY	2 cut(s)	847, 986
MluCI	AATT	3 cut(s)	106, 154, 871
MlyI	GAGTC	2 cut(s)	391, 633
MmeI	TCCRAC	1 cut(s)	922
MnlI	CCTC	3 cut(s)	425, 596, 762
Mph1103I	ATGCAT	3 cut(s)	78, 213, 295
MseI	TTAA	2 cut(s)	276, 870
MslI	CAYNNNNRTG	1 cut(s)	185
MspR9I	CCNGG	3 cut(s)	184, 425, 800
Mva1269I	GAATGC	1 cut(s)	295
MvaI	CCWGG	3 cut(s)	184, 425, 800
MwoI	GCNNNNNNNGC	2 cut(s)	413, 442
NdeI	CATATG	2 cut(s)	72, 713
NdeII	GATC	4 cut(s)	119, 829, 847, 986
NlaIII	CATG	1 cut(s)	126
NlaIV	GGNNCC	1 cut(s)	849
NmuCI	GTSAC	2 cut(s)	239, 309
NsiI	ATGCAT	3 cut(s)	78, 213, 295
NspV	TTCGAA	1 cut(s)	324
PcsI	WCGNNNNNNNCGW	2 cut(s)	225, 377
PctI	GAATGC	1 cut(s)	295
PfeI	GAWTC	4 cut(s)	683, 728, 758, 824
PkrI	GCNGC	5 cut(s)	166, 193, 406, 862, 916
PleI	GAGTC	2 cut(s)	391, 633
PpsI	GAGTC	2 cut(s)	391, 633
Psp6I	CCWGG	3 cut(s)	182, 423, 798
PspGI	CCWGG	3 cut(s)	182, 423, 798
PspN4I	GGNNCC	1 cut(s)	849
PspPI	GGNCC	1 cut(s)	434
PstNI	CAGNNNCTG	1 cut(s)	497
PsuI	RGATCY	2 cut(s)	847, 986
RsaI	GTAC	1 cut(s)	152
RsaNI	GTAC	1 cut(s)	151
RseI	CAYNNNNRTG	1 cut(s)	185
SaqAI	TTAA	2 cut(s)	276, 870
SatI	GCNGC	5 cut(s)	165, 192, 405, 861, 915
Sau3AI	GATC	4 cut(s)	119, 829, 847, 986
Sau96I	GGNCC	1 cut(s)	434
SchI	GAGTC	2 cut(s)	391, 633
ScrFI	CCNGG	3 cut(s)	184, 425, 800
SetI	ASST	9 cut(s)	99, 152, 418, 517, 595, 629, 801, 817, 933
SexAI	ACCWGGT	1 cut(s)	798
SfaNI	GCATC	4 cut(s)	85, 198, 203, 926
SfiI	GGCCNNNNNGGCC	1 cut(s)	442
SfuI	TTCGAA	1 cut(s)	324
SmiMI	CAYNNNNRTG	1 cut(s)	185
SmlI	CTYRAG	1 cut(s)	703
SmoI	CTYRAG	1 cut(s)	703
Sse9I	AATT	3 cut(s)	106, 154, 871
SsiI	CCGC	2 cut(s)	130, 192
SspMI	CTAG	2 cut(s)	605, 821
StyD4I	CCNGG	3 cut(s)	182, 423, 798
TaaI	ACNGT	1 cut(s)	376
TaqI	TCGA	4 cut(s)	324, 371, 645, 651
TasI	AATT	3 cut(s)	106, 154, 871
TauI	GCSGC	1 cut(s)	194
TfiI	GAWTC	4 cut(s)	683, 728, 758, 824
Tru1I	TTAA	2 cut(s)	276, 870
Tru9I	TTAA	2 cut(s)	276, 870
TscAI	CASTG	2 cut(s)	255, 544
TseFI	GTSAC	2 cut(s)	239, 309
TseI	GCWGC	4 cut(s)	164, 404, 860, 914
Tsp45I	GTSAC	2 cut(s)	239, 309
TspDTI	ATGAA	1 cut(s)	59
TspRI	CASTG	2 cut(s)	255, 544
XbaI	TCTAGA	1 cut(s)	820
XspI	CTAG	2 cut(s)	605, 821
Zsp2I	ATGCAT	3 cut(s)	78, 213, 295

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.