Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0002583

Physical Location & Seq

Genomic Coordinates Forward (+)

15743883 .. 15754814

Gene Structure 10932 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000017364

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2025 bp

ATGTCAGTTGATAAATCATGGATGAAGTTAAAACGGTCAGATATAAGGTATTTTGATGGAGTCACGAATTTCATCGATTACGCTACTAGGCATGTCAAAGATAGCGATGGAAAAATGTATTGTCCATGCCGAGATTGTATAAACCAAGATAGAGAATTGCCAGCAACAATACAGAATCATCTTTTGTACAGGGGTATTATGCAAGACTATACAGTATGGCGTAAACATGGGGAGAAGGTGGTTAATGATAGCGGCAGCAGTGGTAATAGTCACAATCATATTGATGACAAGACTCAATTATCTATCTTCTCACTTCCGGGTAAAACTATTGGCACAGGTGTATTGACAGTAATGACTGAAGAGCTTCATCATGCTGCCACCCATTATGTCCTGATAAATTGTGATGAGTGTTTGCCTTTTATTGAAGAACATAAGGACATTCTTCGTATACAACATGGTGATGATCGGGTGGATGAGTTGCACAAAAAAAAATTTGTGGAATGGTTTTCTAAGAAGATCCAACAATTGTATGTAGATGGAAAAGTGAGCGCTCAAATGCGTTCTTTGGCCCAAAGTCCTGGAAAGCAAGCTGTCTACTACAAAGGTTACAATATCCATGGATTTCGGTTCCATACTATACAACATGACGTGACGAAGAAAACACAAAATAGCGGAGTTATGGTCAAAGGAGAGAACCAAATTAATTGTGTGCCTTGGTACGGAACCCTTACAAACGTCGTTGAGCTCTGGTATACAGATCACAATAAAGTTGTCTTGTTTCACAGTAATTGGTTTGACACAGCTACTAAAGGCAAAGGTTATAAGGAAGATCGTTATGGCATACTAAGTGTCAACAATAAGGGGCACATCACTGCCACAACCTTCATCGGGCTTCGAGATCGTTGCGTAGCGACGAGACGGTGCGCCGGCGGAGACGCTTGGTCCAAACCAGACAAGCTCATAAGTCATAACCACCCAAACTCACTATTTGTGAGAAAGATAACGCTGAAACAGTCAGCACCGCCACAGAAGAAGAAGCAGAAGCTGCACGATCCGGCTCATTCCCTCTTTGCTAGCTTGAGGGAGTTCATGATATTCCCTCCTCTTGTATCCTCTCAGCTTAATTATAGGTTCTATGATTCCTCTTGTCCCAACTTGACCAAGATTGTTCAACAAGGCGTTTGGTCAGCTATTGCAAACGATTCTAGGATTGCAGCCTCACTCTTGCGGCTTCACTTCCATGATTGCTTTGTTAATGGATGTGATGCATCTGTATTACTTGATGATACTAGCACTCTTAAGGGGGAGAAAAATGCATTTCCCAACAAAGATTCAGCCAGAGGCTTTGAGGTGATTGACAAAATCAAGTCAAATTTGGAGAAAGCTTGCCCATCCACTGTTTCTTGTGCTGATATACTTACCCTTGCAGCAACTTCAGCTGTTTACTTTAGCGGAGGGCCATTTTGGCCTGTAGCCCTGGGTCGCCGAGACGGCACTACCGCAAGTGAAGATGCAGCTAATGATGATCTGCCATCACCATTTGAGCCCTTGGAAAACATCACTGCAAAGTTCACAGCCAAAGGCCTTAACATAAAGGATGTTGTTGTCCTCTCAGGTGCTCACACTATTGGCTTTGCTCAATGCTTCACATTCAAGCCAAGACTGTTCAACTTTGATGACTCTGGCAAACCAGACCCAACATTAGACACATCATTTCTTACAGATCTACAAAGCGTGTGCCCAAATCGAGCTGACTCTGACACCAAACTGGCTCCACTGGATCCTATCACTTCAACCAGGTTTGATAATGTTTACTTCAAAAGACTGGTGAACAATTCTGGGCTTCTCCAGTCGGACCAGGTCCTTATGGGGGACAATAGGACTGCTTCAATGGTTATCGGCTATAGCAGATTTCCTTATCTGTTTAACAAGGACTTTGGAGAATCCATGGTGAAGATGGCAAATATAGGTGTGCTCACTGGAAAAAGTGGTCAAATCAGGAAGAATTGTAGGGTTGTGAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00940 ko01100 ko01110 map00940 map01100 map01110

Pfam Domains

Protein Families

peroxidase

Protein Analysis

675

Amino Acids

75.72

Weight (kDa)

8.83

Isoelectric Point (pI)

38.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Transpos_assoc	PF13963	5 - 78	3.8e-21	Transposase-associated domain
DUF4216	PF13952	248 - 290	5.2e-07	Domain of unknown function (DUF4216)
peroxidase	PF00141	390 - 635	4.3e-84	Peroxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002583)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G49570
fragaria_vesca	FvH4_1g15550 FvH4_1g15551 FvH4_1g15551 FvH4_2g06860
malus_domestica	MD02G1167700.v1.1 MD05G1075100.v1.1 MD15G1279900.v1.1
prunus_persica	Prupe.7G137500_v2.0.a1 Prupe.8G116400_v2.0.a1
pyrus_communis	pycom05g06820
rosa_chinensis	RchiOBHm_Chr2g0104851 RchiOBHm_Chr2g0104861 RchiOBHm_Chr6g0259161
rosa_laevigata	RLG00000014552 RLG00000017363 RLG00000017364
rosa_multiflora	Rmu_co8495059.1_g000001 Rmu_sc0003419.1_g000019 Rmu_sc0003419.1_g000021 Rmu_sc0004862.1_g000021
rosa_roxburghii	Rroxscaffold_2G00138710 Rroxscaffold_2G00138720 Rroxscaffold_7G00206470
rosa_rugosa	Rorug02G0123500 Rorug05G0585300
rosa_samantha	Rh2AG173600 Rh2AG173800 Rh2BG181200 Rh2BG181400 Rh2CG178600 Rh2CG178700 Rh2DG179800 Rh2DG180000 Rh6AG102300 Rh6CG091700 Rh6DG085700
rosa_wichuraiana	Rw2G013660 Rw2G013670 Rw6G008840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	822
AccI	GTMKAC	3 cut(s)	448, 594, 752
AciI	CCGC	7 cut(s)	252, 672, 930, 1022, 1228, 1452, 1500
AclWI	GGATC	4 cut(s)	511, 1046, 1775, 1788
AcsI	RAATTY	3 cut(s)	67, 491, 1372
AcuI	CTGAAG	2 cut(s)	378, 1419
AfaI	GTAC	2 cut(s)	188, 719
AfeI	AGCGCT	1 cut(s)	550
AfiI	CCNNNNNNNGG	3 cut(s)	719, 888, 1870
AflII	CTTAAG	1 cut(s)	1298
AgsI	TTSAA	7 cut(s)	425, 1172, 1654, 1669, 1794, 1819, 1890
AhdI	GACNNNNNGTC	1 cut(s)	940
AjiI	CACGTC	1 cut(s)	649
AjnI	CCWGG	4 cut(s)	577, 1476, 1796, 1857
Alw21I	GWGCWC	3 cut(s)	747, 1621, 1977
Alw26I	GTCTC	3 cut(s)	910, 927, 1482
AlwI	GGATC	4 cut(s)	511, 1046, 1775, 1788
AlwNI	CAGNNNCTG	1 cut(s)	1045
Aor51HI	AGCGCT	1 cut(s)	550
AoxI	GGCC	4 cut(s)	567, 1457, 1466, 1582
ApeKI	GCWGC	6 cut(s)	255, 374, 1045, 1214, 1427, 1514
ApoI	RAATTY	3 cut(s)	67, 491, 1372
AseI	ATTAAT	1 cut(s)	702
Asp700I	GAANNNNTTC	1 cut(s)	363
AspLEI	GCGC	2 cut(s)	551, 926
AspS9I	GGNCC	5 cut(s)	568, 942, 1457, 1855, 1861
AsuC2I	CCSGG	1 cut(s)	318
AsuHPI	GGTGA	5 cut(s)	470, 1363, 1527, 1840, 1963
AsuNHI	GCTAGC	1 cut(s)	1073
AvaII	GGWCC	3 cut(s)	942, 1855, 1861
BaeGI	GKGCMC	2 cut(s)	867, 1742
BamHI	GGATCC	1 cut(s)	1780
BanII	GRGCYC	2 cut(s)	747, 1548
Bbv12I	GWGCWC	3 cut(s)	747, 1621, 1977
BbvI	GCAGC	6 cut(s)	267, 361, 1032, 1226, 1439, 1526
BccI	CCATC	6 cut(s)	50, 101, 530, 1399, 1540, 1951
BceAI	ACGGC	1 cut(s)	1507
BcgI	CGANNNNNNTGC	2 cut(s)	885, 919
BciT130I	CCWGG	4 cut(s)	579, 1478, 1798, 1859
BciVI	GTATCC	1 cut(s)	1120
BcnI	CCSGG	1 cut(s)	318
BcoDI	GTCTC	3 cut(s)	910, 927, 1482
BfaI	CTAG	5 cut(s)	87, 1074, 1206, 1290, 2023
BfmI	CTRYAG	2 cut(s)	1470, 1903
BfoI	RGCGCY	1 cut(s)	552
BfrI	CTTAAG	1 cut(s)	1298
BfuI	GTATCC	1 cut(s)	1120
BglI	GCCNNNNNGGC	2 cut(s)	1465, 1491
BglII	AGATCT	1 cut(s)	1723
BisI	GCNGC	8 cut(s)	253, 256, 375, 1046, 1215, 1229, 1428, 1515
BlsI	GCNGC	8 cut(s)	254, 257, 376, 1047, 1216, 1230, 1429, 1516
Bme1390I	CCNGG	5 cut(s)	318, 579, 1478, 1798, 1859
Bme18I	GGWCC	3 cut(s)	942, 1855, 1861
BmeRI	GACNNNNNGTC	1 cut(s)	940
BmgBI	CACGTC	1 cut(s)	649
BmgT120I	GGNCC	5 cut(s)	568, 942, 1457, 1855, 1861
BmiI	GGNNCC	4 cut(s)	629, 724, 1773, 1782
BmrFI	CCNGG	5 cut(s)	318, 579, 1478, 1798, 1859
BmsI	GCATC	3 cut(s)	1255, 1277, 1501
BmtI	GCTAGC	1 cut(s)	1077
BpmI	CTGGAG	1 cut(s)	1832
BpuEI	CTTGAG	1 cut(s)	1099
BpuMI	CCSGG	1 cut(s)	318
Bsa29I	ATCGAT	1 cut(s)	75
BsaJI	CCNNGG	6 cut(s)	616, 713, 1476, 1477, 1548, 1947
BsaXI	ACNNNNNCTCC	2 cut(s)	666, 696
Bsc4I	CCNNNNNNNGG	3 cut(s)	719, 888, 1870
Bse118I	RCCGGY	1 cut(s)	926
Bse1I	ACTGG	5 cut(s)	1773, 1782, 1830, 1849, 1984
BseBI	CCWGG	4 cut(s)	579, 1478, 1798, 1859
BseCI	ATCGAT	1 cut(s)	75
BseDI	CCNNGG	6 cut(s)	616, 713, 1476, 1477, 1548, 1947
BseGI	GGATG	5 cut(s)	27, 478, 1265, 1391, 1603
BseLI	CCNNNNNNNGG	3 cut(s)	719, 888, 1870
BseMII	CTCAG	2 cut(s)	1130, 1626
BseNI	ACTGG	5 cut(s)	1773, 1782, 1830, 1849, 1984
BseRI	GAGGAG	1 cut(s)	1092
BseSI	GKGCMC	2 cut(s)	867, 1742
BseXI	GCAGC	6 cut(s)	267, 361, 1032, 1226, 1439, 1526
BsgI	GTGCAG	1 cut(s)	1031
BshFI	GGCC	4 cut(s)	569, 1459, 1468, 1584
BshVI	ATCGAT	1 cut(s)	75
BsiHKAI	GWGCWC	3 cut(s)	747, 1621, 1977
BsiSI	CCGG	3 cut(s)	317, 927, 1055
BslFI	GGGAC	2 cut(s)	1134, 1886
BslI	CCNNNNNNNGG	3 cut(s)	719, 888, 1870
BsmAI	GTCTC	3 cut(s)	910, 927, 1482
BsmBI	CGTCTC	3 cut(s)	910, 927, 1482
BsmFI	GGGAC	2 cut(s)	1134, 1886
BsnI	GGCC	4 cut(s)	569, 1459, 1468, 1584
Bsp1286I	GDGCHC	6 cut(s)	747, 867, 1548, 1621, 1742, 1977
Bsp1407I	TGTACA	1 cut(s)	186
Bsp143I	GATC	9 cut(s)	463, 516, 757, 829, 898, 1051, 1525, 1723, 1780
Bsp19I	CCATGG	2 cut(s)	616, 1947
BspACI	CCGC	7 cut(s)	252, 672, 930, 1022, 1228, 1452, 1500
BspANI	GGCC	4 cut(s)	569, 1459, 1468, 1584
BspCNI	CTCAG	2 cut(s)	1129, 1625
BspDI	ATCGAT	1 cut(s)	75
BspHI	TCATGA	1 cut(s)	1089
BspLI	GGNNCC	4 cut(s)	629, 724, 1773, 1782
BspOI	GCTAGC	1 cut(s)	1077
BspPI	GGATC	4 cut(s)	511, 1046, 1775, 1788
BspQI	GCTCTTC	1 cut(s)	354
BspTI	CTTAAG	1 cut(s)	1298
BsrFI	RCCGGY	1 cut(s)	926
BsrGI	TGTACA	1 cut(s)	186
BsrI	ACTGG	5 cut(s)	1773, 1782, 1830, 1849, 1984
BssAI	RCCGGY	1 cut(s)	926
BssECI	CCNNGG	6 cut(s)	616, 713, 1476, 1477, 1548, 1947
BssMI	GATC	9 cut(s)	463, 516, 757, 829, 898, 1051, 1525, 1723, 1780
BssNAI	GTATAC	2 cut(s)	449, 753
BssT1I	CCWWGG	4 cut(s)	616, 713, 1548, 1947
Bst1107I	GTATAC	2 cut(s)	449, 753
Bst2UI	CCWGG	4 cut(s)	579, 1478, 1798, 1859
Bst4CI	ACNGT	8 cut(s)	36, 214, 349, 785, 921, 1014, 1399, 1665
Bst6I	CTCTTC	1 cut(s)	354
BstAFI	CTTAAG	1 cut(s)	1298
BstAPI	GCANNNNNTGC	1 cut(s)	1045
BstAUI	TGTACA	1 cut(s)	186
BstC8I	GCNNGC	5 cut(s)	162, 588, 928, 1075, 1387
BstDEI	CTNAG	4 cut(s)	510, 845, 1116, 1612
BstDSI	CCRYGG	2 cut(s)	616, 1947
BstF5I	GGATG	5 cut(s)	27, 478, 1265, 1391, 1603
BstH2I	RGCGCY	1 cut(s)	552
BstHHI	GCGC	2 cut(s)	551, 926
BstKTI	GATC	9 cut(s)	466, 519, 760, 832, 901, 1054, 1528, 1726, 1783
BstMAI	GTCTC	3 cut(s)	910, 927, 1482
BstMBI	GATC	9 cut(s)	463, 516, 757, 829, 898, 1051, 1525, 1723, 1780
BstMWI	GCNNNNNNNGC	4 cut(s)	1045, 1436, 1465, 1491
BstNI	CCWGG	4 cut(s)	579, 1478, 1798, 1859
BstNSI	RCATGY	1 cut(s)	95
BstSCI	CCNGG	5 cut(s)	316, 577, 1476, 1796, 1857
BstSFI	CTRYAG	2 cut(s)	1470, 1903
BstSLI	GKGCMC	2 cut(s)	867, 1742
BstV1I	GCAGC	6 cut(s)	267, 361, 1032, 1226, 1439, 1526
BstX2I	RGATCY	3 cut(s)	516, 1723, 1780
BstXI	CCANNNNNNTGG	1 cut(s)	578
BstYI	RGATCY	3 cut(s)	516, 1723, 1780
BstZ17I	GTATAC	2 cut(s)	449, 753
Bsu15I	ATCGAT	1 cut(s)	75
BsuI	GTATCC	1 cut(s)	1120
BsuRI	GGCC	4 cut(s)	569, 1459, 1468, 1584
BsuTUI	ATCGAT	1 cut(s)	75
BtgI	CCRYGG	2 cut(s)	616, 1947
BtgZI	GCGATG	1 cut(s)	120
BtrI	CACGTC	1 cut(s)	649
BtsCI	GGATG	5 cut(s)	27, 478, 1265, 1391, 1603
BtsI	GCAGTG	3 cut(s)	265, 870, 1560
BtsIMutI	CAGTG	6 cut(s)	265, 870, 1395, 1560, 1775, 1977
Cac8I	GCNNGC	5 cut(s)	162, 588, 928, 1075, 1387
CaiI	CAGNNNCTG	1 cut(s)	1045
CciI	TCATGA	1 cut(s)	1089
CfoI	GCGC	2 cut(s)	551, 926
Cfr10I	RCCGGY	1 cut(s)	926
Cfr13I	GGNCC	5 cut(s)	568, 942, 1457, 1855, 1861
ClaI	ATCGAT	1 cut(s)	75
CseI	GACGC	1 cut(s)	944
CsiI	ACCWGGT	2 cut(s)	1796, 1857
Csp6I	GTAC	2 cut(s)	187, 718
CviQI	GTAC	2 cut(s)	187, 718
DdeI	CTNAG	4 cut(s)	510, 845, 1116, 1612
DpnI	GATC	9 cut(s)	465, 518, 759, 831, 900, 1053, 1527, 1725, 1782
DpnII	GATC	9 cut(s)	463, 516, 757, 829, 898, 1051, 1525, 1723, 1780
DriI	GACNNNNNGTC	1 cut(s)	940
Eam1104I	CTCTTC	1 cut(s)	354
Eam1105I	GACNNNNNGTC	1 cut(s)	940
EarI	CTCTTC	1 cut(s)	354
EciI	GGCGGA	1 cut(s)	945
Ecl136II	GAGCTC	1 cut(s)	745
Eco130I	CCWWGG	4 cut(s)	616, 713, 1548, 1947
Eco147I	AGGCCT	1 cut(s)	1584
Eco24I	GRGCYC	2 cut(s)	747, 1548
Eco47I	GGWCC	3 cut(s)	942, 1855, 1861
Eco47III	AGCGCT	1 cut(s)	550
Eco53kI	GAGCTC	1 cut(s)	745
Eco57I	CTGAAG	2 cut(s)	378, 1419
EcoICRI	GAGCTC	1 cut(s)	745
EcoO109I	RGGNCCY	1 cut(s)	1861
EcoRII	CCWGG	4 cut(s)	577, 1476, 1796, 1857
EcoT14I	CCWWGG	4 cut(s)	616, 713, 1548, 1947
EcoT22I	ATGCAT	2 cut(s)	1270, 1318
EcoT38I	GRGCYC	2 cut(s)	747, 1548
ErhI	CCWWGG	4 cut(s)	616, 713, 1548, 1947
Esp3I	CGTCTC	3 cut(s)	910, 927, 1482
FaqI	GGGAC	2 cut(s)	1134, 1886
FblI	GTMKAC	3 cut(s)	448, 594, 752
Fnu4HI	GCNGC	8 cut(s)	253, 256, 375, 1046, 1215, 1229, 1428, 1515
FokI	GGATG	5 cut(s)	34, 485, 1272, 1378, 1610
FriOI	GRGCYC	2 cut(s)	747, 1548
Fsp4HI	GCNGC	8 cut(s)	253, 256, 375, 1046, 1215, 1229, 1428, 1515
FspBI	CTAG	5 cut(s)	87, 1074, 1206, 1290, 2023
GlaI	GCGC	2 cut(s)	550, 925
GluI	GCNGC	8 cut(s)	253, 256, 375, 1046, 1215, 1229, 1428, 1515
GsuI	CTGGAG	1 cut(s)	1832
HaeII	RGCGCY	1 cut(s)	552
HaeIII	GGCC	4 cut(s)	569, 1459, 1468, 1584
HapII	CCGG	3 cut(s)	317, 927, 1055
HgaI	GACGC	1 cut(s)	944
HhaI	GCGC	2 cut(s)	551, 926
Hin6I	GCGC	2 cut(s)	549, 924
HinP1I	GCGC	2 cut(s)	549, 924
HincII	GTYRAC	1 cut(s)	853
HindII	GTYRAC	1 cut(s)	853
HindIII	AAGCTT	1 cut(s)	1383
HinfI	GANTC	9 cut(s)	60, 175, 292, 1139, 1202, 1331, 1679, 1754, 1943
HpaII	CCGG	3 cut(s)	317, 927, 1055
HphI	GGTGA	5 cut(s)	470, 1363, 1527, 1840, 1963
Hpy188I	TCNGA	3 cut(s)	40, 1759, 1855
Hpy188III	TCNNGA	5 cut(s)	64, 391, 896, 1090, 1999
Hpy99I	CGWCG	2 cut(s)	740, 916
HpyAV	CCTTC	2 cut(s)	229, 892
HpyCH4III	ACNGT	8 cut(s)	36, 214, 349, 785, 921, 1014, 1399, 1665
HpyCH4IV	ACGT	2 cut(s)	648, 735
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1045, 1436, 1465, 1491
HpyF3I	CTNAG	4 cut(s)	510, 845, 1116, 1612
HpySE526I	ACGT	2 cut(s)	648, 735
HspAI	GCGC	2 cut(s)	549, 924
KroI	GCCGGC	1 cut(s)	926
KroNI	GCCGGC	1 cut(s)	928
Kzo9I	GATC	9 cut(s)	463, 516, 757, 829, 898, 1051, 1525, 1723, 1780
LguI	GCTCTTC	1 cut(s)	354
LmnI	GCTCC	1 cut(s)	1777
Lsp1109I	GCAGC	6 cut(s)	267, 361, 1032, 1226, 1439, 1526
LweI	GCATC	3 cut(s)	1255, 1277, 1501
MabI	ACCWGGT	2 cut(s)	1796, 1857
MaeI	CTAG	5 cut(s)	87, 1074, 1206, 1290, 2023
MaeII	ACGT	2 cut(s)	648, 735
MaeIII	GTNAC	4 cut(s)	61, 269, 605, 649
MalI	GATC	9 cut(s)	465, 518, 759, 831, 900, 1053, 1527, 1725, 1782
MboI	GATC	9 cut(s)	463, 516, 757, 829, 898, 1051, 1525, 1723, 1780
MfeI	CAATTG	1 cut(s)	524
MflI	RGATCY	3 cut(s)	516, 1723, 1780
MhlI	GDGCHC	6 cut(s)	747, 867, 1548, 1621, 1742, 1977
MlyI	GAGTC	4 cut(s)	69, 286, 1673, 1748
MmeI	TCCRAC	2 cut(s)	544, 1833
Mph1103I	ATGCAT	2 cut(s)	1270, 1318
MreI	CGCCGGCG	1 cut(s)	926
MroNI	GCCGGC	1 cut(s)	926
MroXI	GAANNNNTTC	1 cut(s)	363
MseI	TTAA	8 cut(s)	29, 243, 702, 1122, 1254, 1299, 1587, 1926
MslI	CAYNNNNRTG	3 cut(s)	282, 459, 1239
MspA1I	CMGCKG	1 cut(s)	1439
MspCI	CTTAAG	1 cut(s)	1298
MspI	CCGG	3 cut(s)	317, 927, 1055
MspR9I	CCNGG	5 cut(s)	318, 579, 1478, 1798, 1859
MunI	CAATTG	1 cut(s)	524
MvaI	CCWGG	4 cut(s)	579, 1478, 1798, 1859
MwoI	GCNNNNNNNGC	4 cut(s)	1045, 1436, 1465, 1491
NaeI	GCCGGC	1 cut(s)	928
NciI	CCSGG	1 cut(s)	318
NcoI	CCATGG	2 cut(s)	616, 1947
NdeII	GATC	9 cut(s)	463, 516, 757, 829, 898, 1051, 1525, 1723, 1780
NgoMIV	GCCGGC	1 cut(s)	926
NheI	GCTAGC	1 cut(s)	1073
NlaIV	GGNNCC	4 cut(s)	629, 724, 1773, 1782
NmeAIII	GCCGAG	2 cut(s)	155, 1511
NmuCI	GTSAC	3 cut(s)	61, 269, 649
NsiI	ATGCAT	2 cut(s)	1270, 1318
NspI	RCATGY	1 cut(s)	95
PagI	TCATGA	1 cut(s)	1089
PasI	CCCWGGG	1 cut(s)	1477
PceI	AGGCCT	1 cut(s)	1584
PciSI	GCTCTTC	1 cut(s)	354
PdiI	GCCGGC	1 cut(s)	928
PdmI	GAANNNNTTC	1 cut(s)	363
PfeI	GAWTC	5 cut(s)	175, 1139, 1202, 1331, 1943
PflFI	GACNNNGTC	1 cut(s)	1859
PfoI	TCCNGGA	1 cut(s)	577
PkrI	GCNGC	8 cut(s)	254, 257, 376, 1047, 1216, 1230, 1429, 1516
PleI	GAGTC	4 cut(s)	68, 286, 1673, 1748
PpsI	GAGTC	4 cut(s)	68, 286, 1673, 1748
PpuMI	RGGWCCY	1 cut(s)	1861
PshBI	ATTAAT	1 cut(s)	702
PsiI	TTATAA	1 cut(s)	822
Psp124BI	GAGCTC	1 cut(s)	747
Psp5II	RGGWCCY	1 cut(s)	1861
Psp6I	CCWGG	4 cut(s)	577, 1476, 1796, 1857
PspGI	CCWGG	4 cut(s)	577, 1476, 1796, 1857
PspN4I	GGNNCC	4 cut(s)	629, 724, 1773, 1782
PspPI	GGNCC	5 cut(s)	568, 942, 1457, 1855, 1861
PspPPI	RGGWCCY	1 cut(s)	1861
PstNI	CAGNNNCTG	1 cut(s)	1045
PsuI	RGATCY	3 cut(s)	516, 1723, 1780
PsyI	GACNNNGTC	1 cut(s)	1859
PvuII	CAGCTG	1 cut(s)	1439
RsaI	GTAC	2 cut(s)	188, 719
RsaNI	GTAC	2 cut(s)	187, 718
RseI	CAYNNNNRTG	3 cut(s)	282, 459, 1239
SacI	GAGCTC	1 cut(s)	747
SapI	GCTCTTC	1 cut(s)	354
SaqAI	TTAA	8 cut(s)	29, 243, 702, 1122, 1254, 1299, 1587, 1926
SatI	GCNGC	8 cut(s)	253, 256, 375, 1046, 1215, 1229, 1428, 1515
Sau3AI	GATC	9 cut(s)	463, 516, 757, 829, 898, 1051, 1525, 1723, 1780
Sau96I	GGNCC	5 cut(s)	568, 942, 1457, 1855, 1861
SchI	GAGTC	4 cut(s)	69, 286, 1673, 1748
ScrFI	CCNGG	5 cut(s)	318, 579, 1478, 1798, 1859
SduI	GDGCHC	6 cut(s)	747, 867, 1548, 1621, 1742, 1977
SexAI	ACCWGGT	2 cut(s)	1796, 1857
SfaNI	GCATC	3 cut(s)	1255, 1277, 1501
SfcI	CTRYAG	2 cut(s)	1470, 1903
SfiI	GGCCNNNNNGGCC	1 cut(s)	1465
SgrAI	CRCCGGYG	1 cut(s)	926
SinI	GGWCC	3 cut(s)	942, 1855, 1861
SmiMI	CAYNNNNRTG	3 cut(s)	282, 459, 1239
SmlI	CTYRAG	2 cut(s)	1078, 1298
SmoI	CTYRAG	2 cut(s)	1078, 1298
SseBI	AGGCCT	1 cut(s)	1584
SsiI	CCGC	7 cut(s)	252, 672, 930, 1022, 1228, 1452, 1500
SspMI	CTAG	5 cut(s)	87, 1074, 1206, 1290, 2023
SstI	GAGCTC	1 cut(s)	747
StuI	AGGCCT	1 cut(s)	1584
StyD4I	CCNGG	5 cut(s)	316, 577, 1476, 1796, 1857
StyI	CCWWGG	4 cut(s)	616, 713, 1548, 1947
TaaI	ACNGT	8 cut(s)	36, 214, 349, 785, 921, 1014, 1399, 1665
TaiI	ACGT	2 cut(s)	651, 738
TaqI	TCGA	3 cut(s)	75, 895, 1747
TatI	WGTACW	1 cut(s)	186
TauI	GCSGC	2 cut(s)	255, 1231
TfiI	GAWTC	5 cut(s)	175, 1139, 1202, 1331, 1943
Tru1I	TTAA	8 cut(s)	29, 243, 702, 1122, 1254, 1299, 1587, 1926
Tru9I	TTAA	8 cut(s)	29, 243, 702, 1122, 1254, 1299, 1587, 1926
TscAI	CASTG	6 cut(s)	265, 877, 1402, 1567, 1782, 1984
TseFI	GTSAC	3 cut(s)	61, 269, 649
TseI	GCWGC	6 cut(s)	255, 374, 1045, 1214, 1427, 1514
Tsp45I	GTSAC	3 cut(s)	61, 269, 649
TspDTI	ATGAA	5 cut(s)	38, 61, 356, 874, 1078
TspGWI	ACGGA	1 cut(s)	735
TspRI	CASTG	6 cut(s)	265, 877, 1402, 1567, 1782, 1984
Tth111I	GACNNNGTC	1 cut(s)	1859
Vha464I	CTTAAG	1 cut(s)	1298
VpaK11BI	GGWCC	3 cut(s)	942, 1855, 1861
VspI	ATTAAT	1 cut(s)	702
XapI	RAATTY	3 cut(s)	67, 491, 1372
XceI	RCATGY	1 cut(s)	95
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1954
XmiI	GTMKAC	3 cut(s)	448, 594, 752
XmnI	GAANNNNTTC	1 cut(s)	363
XspI	CTAG	5 cut(s)	87, 1074, 1206, 1290, 2023
Zsp2I	ATGCAT	2 cut(s)	1270, 1318

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.