Prupe.8G134000_v2.0.a1

GTP binding

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Reverse (-)
15517541 .. 15519376
1836 bp
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UTR
Exon/CDS
Intron
Prupe.8G134000.2

Sequence Viewer

Length: 549 bp
ATGGGTGGAGCCATTTCTAGGCTTGCAAAGAGGTTCTTTCCAAAGAATGGAGTGAGGATTCTAATGGTGGGTCTTGATGCTTCAGGAAAGACAACAATCCTCTACAAGCTAAAACTAGGAGAAATTGTCACAACCATACCCACAATTGGCTTCAATGTGGAGACAATAGAGTACAAAAATATTACCTTCACTGTTTGGGATGTTGGAGGGCAAGATAAGATAAGGCCCTTATGGAGACATTACTTTCAGAATACTCAAGGCCTTATATTTGTTGTGGACAGCAGTGATAGAGAGAGAATCGCAGAAGCTCGAAGCGAGCTTCATCACATTTTAAGTGAGAGTGAACTTAGCAATGCAACACTTCTGGTACTTGCTAATAAGCAAGACCTTCCAAATGCTATGTGTACTTCTGAGATTGCAGATAAACTTGCCTTACACTTGCTCGGCCTACGTTACTGGTACATCCAAAGCACTTCTGCCACCTCTGGACAAGGACTCTATGAAGGACTTGATTGGCTATCTAATAATATTATCACTGACAAGACATGA

Protein Analysis

183

Amino Acids

20.4

Weight (kDa)

6.91

Isoelectric Point (pI)

46.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 47
AcuI CTGAAG 1 cut(s) 66
AfaI GTAC 4 cut(s) 173, 369, 406, 461
AfiI CCNNNNNNNGG 3 cut(s) 18, 47, 146
AgsI TTSAA 1 cut(s) 154
AluBI AGCT 3 cut(s) 109, 308, 319
AluI AGCT 3 cut(s) 109, 308, 319
Alw26I GTCTC 2 cut(s) 155, 229
AoxI GGCC 3 cut(s) 224, 259, 445
AspS9I GGNCC 1 cut(s) 225
BcoDI GTCTC 2 cut(s) 155, 229
BfaI CTAG 2 cut(s) 18, 116
BmgT120I GGNCC 1 cut(s) 225
BmiI GGNNCC 1 cut(s) 10
BmsI GCATC 1 cut(s) 67
BpuEI CTTGAG 1 cut(s) 240
BsaXI ACNNNNNCTCC 2 cut(s) 111, 141
Bsc4I CCNNNNNNNGG 3 cut(s) 18, 47, 146
Bse1I ACTGG 1 cut(s) 461
Bse3DI GCAATG 1 cut(s) 358
BseGI GGATG 2 cut(s) 205, 462
BseLI CCNNNNNNNGG 3 cut(s) 18, 47, 146
BseMI GCAATG 1 cut(s) 358
BseMII CTCAG 1 cut(s) 402
BseNI ACTGG 1 cut(s) 461
BshFI GGCC 3 cut(s) 226, 261, 447
BslI CCNNNNNNNGG 3 cut(s) 18, 47, 146
BsmAI GTCTC 2 cut(s) 155, 229
BsnI GGCC 3 cut(s) 226, 261, 447
BspANI GGCC 3 cut(s) 226, 261, 447
BspCNI CTCAG 1 cut(s) 403
BspLI GGNNCC 1 cut(s) 10
BsrDI GCAATG 1 cut(s) 358
BsrI ACTGG 1 cut(s) 461
Bst4CI ACNGT 1 cut(s) 193
BstC8I GCNNGC 2 cut(s) 24, 317
BstDEI CTNAG 2 cut(s) 347, 411
BstF5I GGATG 2 cut(s) 205, 462
BstMAI GTCTC 2 cut(s) 155, 229
BsuRI GGCC 3 cut(s) 226, 261, 447
BtsCI GGATG 2 cut(s) 205, 462
BtsI GCAGTG 1 cut(s) 289
BtsIMutI CAGTG 3 cut(s) 189, 289, 534
Cac8I GCNNGC 2 cut(s) 24, 317
Cfr13I GGNCC 1 cut(s) 225
Csp6I GTAC 4 cut(s) 172, 368, 405, 460
CviAII CATG 1 cut(s) 546
CviQI GTAC 4 cut(s) 172, 368, 405, 460
DdeI CTNAG 2 cut(s) 347, 411
Eco147I AGGCCT 1 cut(s) 261
Eco57I CTGAAG 1 cut(s) 66
EcoO109I RGGNCCY 1 cut(s) 225
FaeI CATG 1 cut(s) 549
FaiI YATR 6 cut(s) 137, 232, 266, 401, 501, 547
FalI AAGNNNNNCTT 2 cut(s) 20, 52
FatI CATG 1 cut(s) 545
FokI GGATG 2 cut(s) 212, 449
FspBI CTAG 2 cut(s) 18, 116
HaeIII GGCC 3 cut(s) 226, 261, 447
Hin1II CATG 1 cut(s) 549
HinfI GANTC 3 cut(s) 58, 297, 495
Hpy166II GTNNAC 3 cut(s) 277, 344, 405
Hpy188I TCNGA 2 cut(s) 249, 412
Hpy188III TCNNGA 3 cut(s) 74, 84, 486
Hpy8I GTNNAC 3 cut(s) 277, 344, 405
HpyAV CCTTC 3 cut(s) 196, 398, 497
HpyCH4III ACNGT 1 cut(s) 193
HpyCH4IV ACGT 1 cut(s) 451
HpyCH4V TGCA 3 cut(s) 26, 356, 419
HpyF3I CTNAG 2 cut(s) 347, 411
HpySE526I ACGT 1 cut(s) 451
Hsp92II CATG 1 cut(s) 549
LmnI GCTCC 1 cut(s) 8
LpnPI CCDG 4 cut(s) 69, 350, 442, 471
LweI GCATC 1 cut(s) 67
MaeI CTAG 2 cut(s) 18, 116
MaeII ACGT 1 cut(s) 451
MaeIII GTNAC 2 cut(s) 127, 452
MfeI CAATTG 1 cut(s) 144
MluCI AATT 2 cut(s) 123, 144
MlyI GAGTC 1 cut(s) 489
MmeI TCCRAC 1 cut(s) 184
MnlI CCTC 5 cut(s) 24, 48, 110, 200, 493
MseI TTAA 1 cut(s) 332
MunI CAATTG 1 cut(s) 144
NlaIII CATG 1 cut(s) 549
NlaIV GGNNCC 1 cut(s) 10
NmeAIII GCCGAG 1 cut(s) 423
NmuCI GTSAC 1 cut(s) 127
PceI AGGCCT 1 cut(s) 261
PfeI GAWTC 2 cut(s) 58, 297
PflMI CCANNNNNTGG 1 cut(s) 47
PleI GAGTC 1 cut(s) 489
PpsI GAGTC 1 cut(s) 489
PspN4I GGNNCC 1 cut(s) 10
PspPI GGNCC 1 cut(s) 225
RsaI GTAC 4 cut(s) 173, 369, 406, 461
RsaNI GTAC 4 cut(s) 172, 368, 405, 460
SaqAI TTAA 1 cut(s) 332
Sau96I GGNCC 1 cut(s) 225
SchI GAGTC 1 cut(s) 489
SetI ASST 8 cut(s) 35, 111, 188, 310, 321, 390, 454, 485
SfaNI GCATC 1 cut(s) 67
SmlI CTYRAG 1 cut(s) 255
SmoI CTYRAG 1 cut(s) 255
Sse9I AATT 2 cut(s) 123, 144
SseBI AGGCCT 1 cut(s) 261
SspI AATATT 2 cut(s) 181, 529
SspMI CTAG 2 cut(s) 18, 116
StuI AGGCCT 1 cut(s) 261
TaaI ACNGT 1 cut(s) 193
TaiI ACGT 1 cut(s) 454
TaqI TCGA 1 cut(s) 310
TasI AATT 2 cut(s) 123, 144
TatI WGTACW 2 cut(s) 171, 404
TfiI GAWTC 2 cut(s) 58, 297
Tru1I TTAA 1 cut(s) 332
Tru9I TTAA 1 cut(s) 332
TscAI CASTG 3 cut(s) 196, 289, 541
TseFI GTSAC 1 cut(s) 127
Tsp45I GTSAC 1 cut(s) 127
TspDTI ATGAA 2 cut(s) 311, 516
TspRI CASTG 3 cut(s) 196, 289, 541
Van91I CCANNNNNTGG 1 cut(s) 47
XspI CTAG 2 cut(s) 18, 116
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.