Rorug02G0136700
ERF Family

Belongs to the small GTPase superfamily. Arf family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
11974924 .. 11977798
2875 bp
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UTR
Exon/CDS
Intron
Rorug02G0136700.1

Sequence Viewer

Length: 180 bp
ATGGAGATATTCTCCGTATCAGTGTCGGATCTTGGTTTATTGGGCTTGATGTTAAACATCTTAATGACGCCAAGTTTTGCTGCTCCTCTTGGACAGGAGGAGCCATTTGTGCTGGTGTATGATTTGATTTGCTTTGAGGTGGTGGATCAAAGTAAAACCAGATGCAGGGAGATGGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

59

Amino Acids

6.6

Weight (kDa)

4.12

Isoelectric Point (pI)

52.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 36, 153
AcyI GRCGYC 1 cut(s) 68
AfiI CCNNNNNNNGG 1 cut(s) 165
AlwI GGATC 2 cut(s) 36, 153
ApeKI GCWGC 1 cut(s) 80
BbvI GCAGC 1 cut(s) 67
BccI CCATC 1 cut(s) 166
BisI GCNGC 1 cut(s) 81
BlsI GCNGC 1 cut(s) 82
BmiI GGNNCC 1 cut(s) 102
BmsI GCATC 1 cut(s) 152
BplI GAGNNNNNCTC 1 cut(s) 28
BsaHI GRCGYC 1 cut(s) 68
Bsc4I CCNNNNNNNGG 1 cut(s) 165
BseLI CCNNNNNNNGG 1 cut(s) 165
BseRI GAGGAG 2 cut(s) 75, 113
BseXI GCAGC 1 cut(s) 67
BslI CCNNNNNNNGG 1 cut(s) 165
Bsp143I GATC 2 cut(s) 28, 145
BspLI GGNNCC 1 cut(s) 102
BspPI GGATC 2 cut(s) 36, 153
BssMI GATC 2 cut(s) 28, 145
BssNI GRCGYC 1 cut(s) 68
BstACI GRCGYC 1 cut(s) 68
BstKTI GATC 2 cut(s) 31, 148
BstMBI GATC 2 cut(s) 28, 145
BstMWI GCNNNNNNNGC 1 cut(s) 109
BstV1I GCAGC 1 cut(s) 67
BstX2I RGATCY 1 cut(s) 28
BstYI RGATCY 1 cut(s) 28
BtsIMutI CAGTG 1 cut(s) 27
CseI GACGC 1 cut(s) 76
CviJI RGCY 2 cut(s) 45, 103
CviKI_1 RGCY 2 cut(s) 45, 103
DpnI GATC 2 cut(s) 30, 147
DpnII GATC 2 cut(s) 28, 145
FaiI YATR 1 cut(s) 120
Fnu4HI GCNGC 1 cut(s) 81
Fsp4HI GCNGC 1 cut(s) 81
GluI GCNGC 1 cut(s) 81
HgaI GACGC 1 cut(s) 76
Hin1I GRCGYC 1 cut(s) 68
Hpy188I TCNGA 1 cut(s) 28
HpyCH4V TGCA 1 cut(s) 165
HpyF10VI GCNNNNNNNGC 1 cut(s) 109
Hsp92I GRCGYC 1 cut(s) 68
Kzo9I GATC 2 cut(s) 28, 145
LmnI GCTCC 2 cut(s) 88, 100
LpnPI CCDG 4 cut(s) 80, 98, 151, 172
Lsp1109I GCAGC 1 cut(s) 67
LweI GCATC 1 cut(s) 152
MalI GATC 2 cut(s) 30, 147
MboI GATC 2 cut(s) 28, 145
MflI RGATCY 1 cut(s) 28
MmeI TCCRAC 1 cut(s) 6
MnlI CCTC 3 cut(s) 91, 96, 130
MseI TTAA 3 cut(s) 53, 62, 178
MslI CAYNNNNRTG 1 cut(s) 62
MwoI GCNNNNNNNGC 1 cut(s) 109
NdeII GATC 2 cut(s) 28, 145
NlaIV GGNNCC 1 cut(s) 102
PkrI GCNGC 1 cut(s) 82
PspN4I GGNNCC 1 cut(s) 102
PsuI RGATCY 1 cut(s) 28
RseI CAYNNNNRTG 1 cut(s) 62
SaqAI TTAA 3 cut(s) 53, 62, 178
SatI GCNGC 1 cut(s) 81
Sau3AI GATC 2 cut(s) 28, 145
SetI ASST 1 cut(s) 141
SfaNI GCATC 1 cut(s) 152
SgeI CNNG 7 cut(s) 44, 58, 84, 101, 107, 125, 171
SmiMI CAYNNNNRTG 1 cut(s) 62
Tru1I TTAA 3 cut(s) 53, 62, 178
Tru9I TTAA 3 cut(s) 53, 62, 178
TscAI CASTG 1 cut(s) 27
TseI GCWGC 1 cut(s) 80
TspGWI ACGGA 1 cut(s) 4
TspRI CASTG 1 cut(s) 27
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.