pycom01g02670

aldehyde dehydrogenase (NAD) activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
OG0005203
Physical Location & Seq
Forward (+)
2172563 .. 2174183
1621 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g02670.3

Sequence Viewer

Length: 1137 bp
ATGCTCGTGCTGCTGAGAAGAGAAAGATGTAGGTCGAGGCCCATGTGGGTTAGGGTTGCTGAAAAGTTTGTTATTGAACTGACTTCTCCTAAGAAGAAGAAAAAGATTGTTGAGTCTGAGCTTATGAAACCTGCTACTCCGAAGGTGCCCACGACCATTGCTAAGAGGATTGTTCAGAGGAAAGGTTCGGTGTTGCCCCTATTATCTAGGTTTGTAACGAAGTGTGTGTTGGGAGCTAAGTTCAGTTTGATTTCTAAGAGGTTCACCACTATGAAGAACGGGCAGATGAATTCTACTGCTAAGATGGCGCCTAAGCCTGCTCCTCATTTTGCTGTGACTGATTTTGGTGCTAGGTGTGGGAATCAGACCGGTAAACTCACTTGCACCACTTTAGGCTACCTTTCCTTGTTGTCGACAAATGGGAGAATCTCTACGTCGGTGGGTGTGAAAATCAGGGGGATTCGGTCTGAATCCCTCGAAAATTTCACGAAATTCTTCTGGAATTTCGAAGATCGTCGGTTTGCTGGGTTCTTTAGGGACGATGATACCAAACGACATCATTTGGTTCTCAGTGTGGGAAGCTACGGGCTACTAGGCTCATGGCATGCGTGGCTTGCGGCTCCTAGCTCGGGGTTCGACGACTCGGTGACTAGAAGCAGTGGCTCGTCAGGGTTTGAAAACCCTAATTTTGTTTCAAATTCAATTTTATATAATCAAATCAATGCATATTCACAATATCAATTCATAAAACGTAAAATTAGGTCATGCATTATGGTGAAGTTTCAAGCAATTAGAGCTGAAAATTTTGAGATAATAACTGTTGTTTTGGAAAAACGTAGATTGCGTGTTGATATTGATAAACTGGTTTCCATCTCAAAGCTTTATATGAATTCAATAAAATCAGTACGTAGCATCAAGAACGCGCTGATAACGTGTTGTGGCCTATGTTTAATTGATGGAAAAGAGAGAGGGCACAACATGGATCGAAAGAGAGAGGCTTCTAGATCCCAAAAGATTCCTAATCTATCTTTACTTATGATTTACACAATCACACATGTATTAGAATGTATATCACAACACTTTTCTATTAATTTATTTAGCATTAAAATTAAGGCTTTTTTTTTCTTTTTTTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Aldedh Fe-ADH

Protein Analysis

379

Amino Acids

43.08

Weight (kDa)

10.31

Isoelectric Point (pI)

37.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 139
AccB1I GGYRCC 2 cut(s) 145, 307
AccI GTMKAC 1 cut(s) 413
AccII CGCG 1 cut(s) 923
AciI CCGC 1 cut(s) 617
AclWI GGATC 2 cut(s) 990, 999
AcsI RAATTY 7 cut(s) 289, 481, 491, 502, 697, 802, 889
AcyI GRCGYC 1 cut(s) 308
AfaI GTAC 1 cut(s) 906
AfiI CCNNNNNNNGG 1 cut(s) 629
AflIII ACRYGT 2 cut(s) 932, 1054
AgeI ACCGGT 1 cut(s) 368
AgsI TTSAA 6 cut(s) 77, 677, 696, 702, 785, 894
AjuI GAANNNNNNNTTGG 2 cut(s) 212, 244
AluBI AGCT 6 cut(s) 121, 236, 582, 627, 797, 880
AluI AGCT 6 cut(s) 121, 236, 582, 627, 797, 880
AlwI GGATC 2 cut(s) 990, 999
Ama87I CYCGRG 1 cut(s) 628
AoxI GGCC 2 cut(s) 38, 940
ApeKI GCWGC 1 cut(s) 10
ApoI RAATTY 7 cut(s) 289, 481, 491, 502, 697, 802, 889
AseI ATTAAT 1 cut(s) 1089
AsiGI ACCGGT 1 cut(s) 368
Asp700I GAANNNNTTC 1 cut(s) 494
AspLEI GCGC 2 cut(s) 310, 925
AspS9I GGNCC 1 cut(s) 39
AsuHPI GGTGA 3 cut(s) 256, 658, 787
AsuII TTCGAA 1 cut(s) 507
AvaI CYCGRG 1 cut(s) 628
BaeGI GKGCMC 2 cut(s) 150, 975
BanI GGYRCC 2 cut(s) 145, 307
BauI CACGAG 1 cut(s) 5
BccI CCATC 3 cut(s) 298, 878, 950
BfaI CTAG 6 cut(s) 207, 351, 593, 624, 651, 1002
BfoI RGCGCY 1 cut(s) 311
BfuAI ACCTGC 1 cut(s) 139
BisI GCNGC 2 cut(s) 11, 618
BlsI GCNGC 2 cut(s) 12, 619
BmeT110I CYCGRG 1 cut(s) 628
BmgT120I GGNCC 1 cut(s) 39
BmiI GGNNCC 3 cut(s) 147, 309, 621
BmsI GCATC 1 cut(s) 921
Bpu10I CCTNAGC 1 cut(s) 312
Bpu14I TTCGAA 1 cut(s) 507
BsaAI YACGTR 1 cut(s) 908
BsaHI GRCGYC 1 cut(s) 308
BsaWI WCCGGW 1 cut(s) 368
Bsc4I CCNNNNNNNGG 1 cut(s) 629
Bse118I RCCGGY 1 cut(s) 368
Bse1I ACTGG 1 cut(s) 867
Bse3DI GCAATG 1 cut(s) 156
BseLI CCNNNNNNNGG 1 cut(s) 629
BseMI GCAATG 1 cut(s) 156
BseMII CTCAG 3 cut(s) 5, 108, 583
BseNI ACTGG 1 cut(s) 867
BseRI GAGGAG 1 cut(s) 312
BseSI GKGCMC 2 cut(s) 150, 975
BseYI CCCAGC 1 cut(s) 524
Bsh1236I CGCG 1 cut(s) 923
BshFI GGCC 2 cut(s) 40, 942
BshNI GGYRCC 2 cut(s) 145, 307
BshTI ACCGGT 1 cut(s) 368
BsiHKCI CYCGRG 1 cut(s) 628
BsiSI CCGG 1 cut(s) 369
BslFI GGGAC 1 cut(s) 551
BslI CCNNNNNNNGG 1 cut(s) 629
BsmFI GGGAC 1 cut(s) 551
BsnI GGCC 2 cut(s) 40, 942
BsoBI CYCGRG 1 cut(s) 628
Bsp119I TTCGAA 1 cut(s) 507
Bsp1286I GDGCHC 2 cut(s) 150, 975
Bsp143I GATC 3 cut(s) 511, 982, 1004
BspACI CCGC 1 cut(s) 617
BspANI GGCC 2 cut(s) 40, 942
BspCNI CTCAG 3 cut(s) 6, 109, 582
BspFNI CGCG 1 cut(s) 923
BspLI GGNNCC 3 cut(s) 147, 309, 621
BspMI ACCTGC 1 cut(s) 139
BspPI GGATC 2 cut(s) 990, 999
BspT104I TTCGAA 1 cut(s) 507
BspT107I GGYRCC 2 cut(s) 145, 307
BsrDI GCAATG 1 cut(s) 156
BsrFI RCCGGY 1 cut(s) 368
BsrI ACTGG 1 cut(s) 867
BssAI RCCGGY 1 cut(s) 368
BssMI GATC 3 cut(s) 511, 982, 1004
BssNI GRCGYC 1 cut(s) 308
BssSI CACGAG 1 cut(s) 5
Bst2BI CACGAG 1 cut(s) 5
Bst4CI ACNGT 1 cut(s) 820
Bst6I CTCTTC 1 cut(s) 13
BstACI GRCGYC 1 cut(s) 308
BstBAI YACGTR 1 cut(s) 908
BstBI TTCGAA 1 cut(s) 507
BstC8I GCNNGC 3 cut(s) 318, 606, 615
BstDEI CTNAG 9 cut(s) 14, 90, 117, 162, 237, 255, 300, 312, 569
BstFNI CGCG 1 cut(s) 923
BstH2I RGCGCY 1 cut(s) 311
BstHHI GCGC 2 cut(s) 310, 925
BstKTI GATC 3 cut(s) 514, 985, 1007
BstMBI GATC 3 cut(s) 511, 982, 1004
BstMWI GCNNNNNNNGC 5 cut(s) 10, 305, 610, 614, 794
BstNSI RCATGY 2 cut(s) 608, 1058
BstSLI GKGCMC 2 cut(s) 150, 975
BstSNI TACGTA 1 cut(s) 908
BstUI CGCG 1 cut(s) 923
BstX2I RGATCY 1 cut(s) 1004
BstYI RGATCY 1 cut(s) 1004
BsuRI GGCC 2 cut(s) 40, 942
BtsI GCAGTG 1 cut(s) 664
BtsIMutI CAGTG 2 cut(s) 577, 664
BveI ACCTGC 1 cut(s) 139
Cac8I GCNNGC 3 cut(s) 318, 606, 615
CfoI GCGC 2 cut(s) 310, 925
Cfr10I RCCGGY 1 cut(s) 368
Cfr13I GGNCC 1 cut(s) 39
Csp6I GTAC 1 cut(s) 905
CspAI ACCGGT 1 cut(s) 368
CspCI CAANNNNNGTGG 2 cut(s) 139, 174
CviAII CATG 6 cut(s) 43, 600, 605, 765, 979, 1055
CviQI GTAC 1 cut(s) 905
DdeI CTNAG 9 cut(s) 14, 90, 117, 162, 237, 255, 300, 312, 569
DinI GGCGCC 1 cut(s) 309
DpnI GATC 3 cut(s) 513, 984, 1006
DpnII GATC 3 cut(s) 511, 982, 1004
Eam1104I CTCTTC 1 cut(s) 13
EarI CTCTTC 1 cut(s) 13
Eco105I TACGTA 1 cut(s) 908
Eco88I CYCGRG 1 cut(s) 628
EcoRI GAATTC 2 cut(s) 289, 889
EcoT22I ATGCAT 2 cut(s) 727, 770
EgeI GGCGCC 1 cut(s) 309
EheI GGCGCC 1 cut(s) 309
FaeI CATG 6 cut(s) 46, 603, 608, 768, 982, 1058
FaqI GGGAC 1 cut(s) 551
FatI CATG 6 cut(s) 42, 599, 604, 764, 978, 1054
FblI GTMKAC 1 cut(s) 413
Fnu4HI GCNGC 2 cut(s) 11, 618
Fsp4HI GCNGC 2 cut(s) 11, 618
FspBI CTAG 6 cut(s) 207, 351, 593, 624, 651, 1002
GlaI GCGC 2 cut(s) 309, 924
GluI GCNGC 2 cut(s) 11, 618
GsaI CCCAGC 1 cut(s) 528
HaeII RGCGCY 1 cut(s) 311
HaeIII GGCC 2 cut(s) 40, 942
HapII CCGG 1 cut(s) 369
HhaI GCGC 2 cut(s) 310, 925
Hin1I GRCGYC 1 cut(s) 308
Hin1II CATG 6 cut(s) 46, 603, 608, 768, 982, 1058
Hin6I GCGC 2 cut(s) 308, 923
HinP1I GCGC 2 cut(s) 308, 923
HincII GTYRAC 1 cut(s) 414
HindII GTYRAC 1 cut(s) 414
HindIII AAGCTT 1 cut(s) 878
HinfI GANTC 7 cut(s) 113, 361, 426, 460, 470, 641, 1015
HpaII CCGG 1 cut(s) 369
HphI GGTGA 3 cut(s) 256, 658, 787
Hpy166II GTNNAC 3 cut(s) 264, 374, 414
Hpy188I TCNGA 5 cut(s) 118, 141, 177, 366, 469
Hpy188III TCNNGA 4 cut(s) 487, 499, 916, 1002
Hpy8I GTNNAC 3 cut(s) 264, 374, 414
Hpy99I CGWCG 3 cut(s) 439, 519, 641
HpyAV CCTTC 1 cut(s) 136
HpyCH4III ACNGT 1 cut(s) 820
HpyCH4IV ACGT 5 cut(s) 434, 751, 835, 907, 932
HpyCH4V TGCA 3 cut(s) 384, 725, 768
HpyF10VI GCNNNNNNNGC 5 cut(s) 10, 305, 610, 614, 794
HpyF3I CTNAG 9 cut(s) 14, 90, 117, 162, 237, 255, 300, 312, 569
HpySE526I ACGT 5 cut(s) 434, 751, 835, 907, 932
Hsp92I GRCGYC 1 cut(s) 308
Hsp92II CATG 6 cut(s) 46, 603, 608, 768, 982, 1058
HspAI GCGC 2 cut(s) 308, 923
KasI GGCGCC 1 cut(s) 307
Kzo9I GATC 3 cut(s) 511, 982, 1004
LmnI GCTCC 3 cut(s) 233, 325, 625
LpnPI CCDG 8 cut(s) 144, 330, 382, 439, 484, 510, 654, 848
LweI GCATC 1 cut(s) 921
MaeI CTAG 6 cut(s) 207, 351, 593, 624, 651, 1002
MaeII ACGT 5 cut(s) 434, 751, 835, 907, 932
MaeIII GTNAC 3 cut(s) 214, 334, 646
MalI GATC 3 cut(s) 513, 984, 1006
MboI GATC 3 cut(s) 511, 982, 1004
MboII GAAGA 6 cut(s) 30, 106, 109, 286, 487, 521
MflI RGATCY 1 cut(s) 1004
MhlI GDGCHC 2 cut(s) 150, 975
Mly113I GGCGCC 1 cut(s) 308
MlyI GAGTC 2 cut(s) 122, 635
MnlI CCTC 8 cut(s) 30, 159, 171, 252, 333, 485, 962, 988
Mph1103I ATGCAT 2 cut(s) 727, 770
MroXI GAANNNNTTC 1 cut(s) 494
MseI TTAA 5 cut(s) 950, 1089, 1104, 1110, 1135
MslI CAYNNNNRTG 2 cut(s) 269, 773
MspI CCGG 1 cut(s) 369
MvnI CGCG 1 cut(s) 923
MwoI GCNNNNNNNGC 5 cut(s) 10, 305, 610, 614, 794
NarI GGCGCC 1 cut(s) 308
NdeII GATC 3 cut(s) 511, 982, 1004
NlaIII CATG 6 cut(s) 46, 603, 608, 768, 982, 1058
NlaIV GGNNCC 3 cut(s) 147, 309, 621
NmuCI GTSAC 2 cut(s) 334, 646
NsiI ATGCAT 2 cut(s) 727, 770
NspI RCATGY 2 cut(s) 608, 1058
NspV TTCGAA 1 cut(s) 507
PaeI GCATGC 1 cut(s) 608
PciI ACATGT 1 cut(s) 1054
PcsI WCGNNNNNNNCGW 1 cut(s) 841
PdmI GAANNNNTTC 1 cut(s) 494
PfeI GAWTC 5 cut(s) 361, 426, 460, 470, 1015
PinAI ACCGGT 1 cut(s) 368
PkrI GCNGC 2 cut(s) 12, 619
PleI GAGTC 2 cut(s) 121, 635
PluTI GGCGCC 1 cut(s) 311
PpsI GAGTC 2 cut(s) 121, 635
Ppu21I YACGTR 1 cut(s) 908
PscI ACATGT 1 cut(s) 1054
PshBI ATTAAT 1 cut(s) 1089
PspFI CCCAGC 1 cut(s) 524
PspN4I GGNNCC 3 cut(s) 147, 309, 621
PspPI GGNCC 1 cut(s) 39
PsuI RGATCY 1 cut(s) 1004
RsaI GTAC 1 cut(s) 906
RsaNI GTAC 1 cut(s) 905
RseI CAYNNNNRTG 2 cut(s) 269, 773
SalI GTCGAC 1 cut(s) 412
SaqAI TTAA 5 cut(s) 950, 1089, 1104, 1110, 1135
SatI GCNGC 2 cut(s) 11, 618
Sau3AI GATC 3 cut(s) 511, 982, 1004
Sau96I GGNCC 1 cut(s) 39
SchI GAGTC 2 cut(s) 122, 635
SduI GDGCHC 2 cut(s) 150, 975
SfaNI GCATC 1 cut(s) 921
SfoI GGCGCC 1 cut(s) 309
SfuI TTCGAA 1 cut(s) 507
SmiMI CAYNNNNRTG 2 cut(s) 269, 773
SnaBI TACGTA 1 cut(s) 908
SphI GCATGC 1 cut(s) 608
SsiI CCGC 1 cut(s) 617
SspDI GGCGCC 1 cut(s) 307
SspMI CTAG 6 cut(s) 207, 351, 593, 624, 651, 1002
TaaI ACNGT 1 cut(s) 820
TaiI ACGT 5 cut(s) 437, 754, 838, 910, 935
TaqI TCGA 6 cut(s) 35, 413, 477, 507, 636, 985
TaqII GACCGA 1 cut(s) 453
TauI GCSGC 1 cut(s) 620
TfiI GAWTC 5 cut(s) 361, 426, 460, 470, 1015
Tru1I TTAA 5 cut(s) 950, 1089, 1104, 1110, 1135
Tru9I TTAA 5 cut(s) 950, 1089, 1104, 1110, 1135
TscAI CASTG 2 cut(s) 577, 664
TseFI GTSAC 2 cut(s) 334, 646
TseI GCWGC 1 cut(s) 10
Tsp45I GTSAC 2 cut(s) 334, 646
TspDTI ATGAA 5 cut(s) 140, 287, 302, 733, 902
TspRI CASTG 2 cut(s) 577, 664
VspI ATTAAT 1 cut(s) 1089
XapI RAATTY 7 cut(s) 289, 481, 491, 502, 697, 802, 889
XbaI TCTAGA 1 cut(s) 1001
XceI RCATGY 2 cut(s) 608, 1058
XmiI GTMKAC 1 cut(s) 413
XmnI GAANNNNTTC 1 cut(s) 494
XspI CTAG 6 cut(s) 207, 351, 593, 624, 651, 1002
Zsp2I ATGCAT 2 cut(s) 727, 770
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.