exonuclease activity
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 320, 786, 1263 |
| AarI | CACCTGC | 1 cut(s) | 1265 |
| Acc36I | ACCTGC | 3 cut(s) | 193, 200, 1265 |
| AccB1I | GGYRCC | 2 cut(s) | 1070, 1109 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 193, 838 |
| AccII | CGCG | 1 cut(s) | 1421 |
| AciI | CCGC | 4 cut(s) | 179, 248, 1113, 1815 |
| AclWI | GGATC | 2 cut(s) | 790, 1334 |
| AcsI | RAATTY | 2 cut(s) | 69, 119 |
| AcuI | CTGAAG | 3 cut(s) | 324, 573, 878 |
| AcyI | GRCGYC | 1 cut(s) | 1340 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 193, 414, 838, 1589, 1769, 1845 |
| AflII | CTTAAG | 1 cut(s) | 662 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 159 |
| AjiI | CACGTC | 2 cut(s) | 339, 1695 |
| Alw21I | GWGCWC | 2 cut(s) | 600, 856 |
| Alw26I | GTCTC | 6 cut(s) | 91, 133, 956, 1031, 1590, 1614 |
| Alw44I | GTGCAC | 1 cut(s) | 852 |
| AlwI | GGATC | 2 cut(s) | 790, 1334 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 193 |
| Ama87I | CYCGRG | 2 cut(s) | 136, 959 |
| AoxI | GGCC | 3 cut(s) | 1411, 1592, 1613 |
| ApaI | GGGCCC | 1 cut(s) | 1596 |
| ApaLI | GTGCAC | 1 cut(s) | 852 |
| ApoI | RAATTY | 2 cut(s) | 69, 119 |
| AseI | ATTAAT | 1 cut(s) | 579 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 986, 1190 |
| AspLEI | GCGC | 2 cut(s) | 1102, 1423 |
| AspS9I | GGNCC | 3 cut(s) | 267, 1592, 1593 |
| AsuC2I | CCSGG | 1 cut(s) | 1596 |
| AsuHPI | GGTGA | 7 cut(s) | 104, 176, 956, 1061, 1106, 1445, 1720 |
| AsuII | TTCGAA | 2 cut(s) | 990, 1010 |
| AsuNHI | GCTAGC | 1 cut(s) | 1490 |
| AvaI | CYCGRG | 2 cut(s) | 136, 959 |
| AvaII | GGWCC | 1 cut(s) | 267 |
| BaeGI | GKGCMC | 4 cut(s) | 856, 1578, 1596, 1852 |
| BanI | GGYRCC | 2 cut(s) | 1070, 1109 |
| BanII | GRGCYC | 2 cut(s) | 600, 1596 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1518, 1550 |
| BauI | CACGAG | 1 cut(s) | 169 |
| BbsI | GAAGAC | 2 cut(s) | 235, 1526 |
| Bbv12I | GWGCWC | 2 cut(s) | 600, 856 |
| BccI | CCATC | 4 cut(s) | 258, 1100, 1229, 1661 |
| BceAI | ACGGC | 4 cut(s) | 713, 1268, 1398, 1508 |
| BcnI | CCSGG | 1 cut(s) | 1596 |
| BcoDI | GTCTC | 6 cut(s) | 91, 133, 956, 1031, 1590, 1614 |
| BfaI | CTAG | 7 cut(s) | 954, 1089, 1491, 1556, 1664, 1673, 1820 |
| BfmI | CTRYAG | 3 cut(s) | 641, 896, 1545 |
| BfoI | RGCGCY | 1 cut(s) | 1103 |
| BfrI | CTTAAG | 1 cut(s) | 662 |
| BfuAI | ACCTGC | 3 cut(s) | 193, 200, 1265 |
| BglII | AGATCT | 1 cut(s) | 715 |
| Bme1390I | CCNGG | 1 cut(s) | 1596 |
| Bme18I | GGWCC | 1 cut(s) | 267 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 159 |
| BmeT110I | CYCGRG | 2 cut(s) | 136, 959 |
| BmgBI | CACGTC | 2 cut(s) | 339, 1695 |
| BmgT120I | GGNCC | 3 cut(s) | 267, 1592, 1593 |
| BmiI | GGNNCC | 5 cut(s) | 1072, 1111, 1593, 1594, 1600 |
| BmrFI | CCNGG | 1 cut(s) | 1596 |
| BmrI | ACTGGG | 2 cut(s) | 203, 1777 |
| BmsI | GCATC | 2 cut(s) | 92, 640 |
| BmtI | GCTAGC | 1 cut(s) | 1494 |
| BmuI | ACTGGG | 2 cut(s) | 203, 1777 |
| BpiI | GAAGAC | 2 cut(s) | 235, 1526 |
| Bpu14I | TTCGAA | 2 cut(s) | 990, 1010 |
| BpuMI | CCSGG | 1 cut(s) | 1596 |
| BsaAI | YACGTR | 1 cut(s) | 1451 |
| BsaHI | GRCGYC | 1 cut(s) | 1340 |
| BsaI | GGTCTC | 3 cut(s) | 133, 1031, 1614 |
| BsaJI | CCNNGG | 4 cut(s) | 516, 847, 1074, 1731 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 193, 414, 838, 1589, 1769, 1845 |
| Bse1I | ACTGG | 4 cut(s) | 187, 198, 1774, 1783 |
| BseDI | CCNNGG | 4 cut(s) | 516, 847, 1074, 1731 |
| BseGI | GGATG | 3 cut(s) | 769, 895, 1810 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 193, 414, 838, 1589, 1769, 1845 |
| BseMII | CTCAG | 5 cut(s) | 477, 585, 719, 726, 1110 |
| BseNI | ACTGG | 4 cut(s) | 187, 198, 1774, 1783 |
| BseRI | GAGGAG | 1 cut(s) | 938 |
| BseSI | GKGCMC | 4 cut(s) | 856, 1578, 1596, 1852 |
| BseYI | CCCAGC | 2 cut(s) | 216, 253 |
| BsgI | GTGCAG | 1 cut(s) | 1428 |
| Bsh1236I | CGCG | 1 cut(s) | 1421 |
| BshFI | GGCC | 3 cut(s) | 1413, 1594, 1615 |
| BshNI | GGYRCC | 2 cut(s) | 1070, 1109 |
| BsiHKAI | GWGCWC | 2 cut(s) | 600, 856 |
| BsiHKCI | CYCGRG | 2 cut(s) | 136, 959 |
| BsiSI | CCGG | 2 cut(s) | 1336, 1596 |
| BslFI | GGGAC | 1 cut(s) | 1821 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 193, 414, 838, 1589, 1769, 1845 |
| BsmAI | GTCTC | 6 cut(s) | 91, 133, 956, 1031, 1590, 1614 |
| BsmBI | CGTCTC | 1 cut(s) | 1590 |
| BsmFI | GGGAC | 1 cut(s) | 1821 |
| BsnI | GGCC | 3 cut(s) | 1413, 1594, 1615 |
| Bso31I | GGTCTC | 3 cut(s) | 133, 1031, 1614 |
| BsoBI | CYCGRG | 2 cut(s) | 136, 959 |
| Bsp119I | TTCGAA | 2 cut(s) | 990, 1010 |
| Bsp120I | GGGCCC | 1 cut(s) | 1592 |
| Bsp1286I | GDGCHC | 5 cut(s) | 600, 856, 1578, 1596, 1852 |
| Bsp143I | GATC | 5 cut(s) | 715, 795, 861, 927, 1326 |
| BspACI | CCGC | 4 cut(s) | 179, 248, 1113, 1815 |
| BspANI | GGCC | 3 cut(s) | 1413, 1594, 1615 |
| BspCNI | CTCAG | 5 cut(s) | 478, 586, 718, 727, 1111 |
| BspFNI | CGCG | 1 cut(s) | 1421 |
| BspLI | GGNNCC | 5 cut(s) | 1072, 1111, 1593, 1594, 1600 |
| BspMAI | CTGCAG | 2 cut(s) | 645, 900 |
| BspMI | ACCTGC | 3 cut(s) | 193, 200, 1265 |
| BspOI | GCTAGC | 1 cut(s) | 1494 |
| BspPI | GGATC | 2 cut(s) | 790, 1334 |
| BspT104I | TTCGAA | 2 cut(s) | 990, 1010 |
| BspT107I | GGYRCC | 2 cut(s) | 1070, 1109 |
| BspTI | CTTAAG | 1 cut(s) | 662 |
| BspTNI | GGTCTC | 3 cut(s) | 133, 1031, 1614 |
| BsrI | ACTGG | 4 cut(s) | 187, 198, 1774, 1783 |
| BssECI | CCNNGG | 4 cut(s) | 516, 847, 1074, 1731 |
| BssMI | GATC | 5 cut(s) | 715, 795, 861, 927, 1326 |
| BssNI | GRCGYC | 1 cut(s) | 1340 |
| BssSI | CACGAG | 1 cut(s) | 169 |
| BssT1I | CCWWGG | 3 cut(s) | 516, 847, 1731 |
| Bst2BI | CACGAG | 1 cut(s) | 169 |
| Bst4CI | ACNGT | 1 cut(s) | 1546 |
| Bst6I | CTCTTC | 2 cut(s) | 235, 762 |
| BstACI | GRCGYC | 1 cut(s) | 1340 |
| BstAFI | CTTAAG | 1 cut(s) | 662 |
| BstBAI | YACGTR | 1 cut(s) | 1451 |
| BstBI | TTCGAA | 2 cut(s) | 990, 1010 |
| BstC8I | GCNNGC | 5 cut(s) | 1411, 1488, 1492, 1521, 1650 |
| BstDEI | CTNAG | 6 cut(s) | 486, 594, 705, 735, 804, 1119 |
| BstEII | GGTNACC | 1 cut(s) | 182 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1843 |
| BstF5I | GGATG | 3 cut(s) | 769, 895, 1810 |
| BstFNI | CGCG | 1 cut(s) | 1421 |
| BstH2I | RGCGCY | 1 cut(s) | 1103 |
| BstHHI | GCGC | 2 cut(s) | 1102, 1423 |
| BstKTI | GATC | 5 cut(s) | 718, 798, 864, 930, 1329 |
| BstMAI | GTCTC | 6 cut(s) | 91, 133, 956, 1031, 1590, 1614 |
| BstMBI | GATC | 5 cut(s) | 715, 795, 861, 927, 1326 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 548, 554, 755, 1280, 1516 |
| BstNSI | RCATGY | 1 cut(s) | 1459 |
| BstPI | GGTNACC | 1 cut(s) | 182 |
| BstSCI | CCNGG | 1 cut(s) | 1594 |
| BstSFI | CTRYAG | 3 cut(s) | 641, 896, 1545 |
| BstSLI | GKGCMC | 4 cut(s) | 856, 1578, 1596, 1852 |
| BstSNI | TACGTA | 1 cut(s) | 1451 |
| BstUI | CGCG | 1 cut(s) | 1421 |
| BstV2I | GAAGAC | 2 cut(s) | 235, 1526 |
| BstX2I | RGATCY | 1 cut(s) | 715 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 532 |
| BstYI | RGATCY | 1 cut(s) | 715 |
| BsuRI | GGCC | 3 cut(s) | 1413, 1594, 1615 |
| BtrI | CACGTC | 2 cut(s) | 339, 1695 |
| BtsCI | GGATG | 3 cut(s) | 769, 895, 1810 |
| BtsI | GCAGTG | 2 cut(s) | 905, 1470 |
| BtsIMutI | CAGTG | 4 cut(s) | 854, 905, 1470, 1767 |
| BveI | ACCTGC | 3 cut(s) | 193, 200, 1265 |
| Cac8I | GCNNGC | 5 cut(s) | 1411, 1488, 1492, 1521, 1650 |
| CaiI | CAGNNNCTG | 1 cut(s) | 193 |
| CfoI | GCGC | 2 cut(s) | 1102, 1423 |
| Cfr13I | GGNCC | 3 cut(s) | 267, 1592, 1593 |
| CseI | GACGC | 2 cut(s) | 892, 1348 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 525, 560 |
| CviAII | CATG | 5 cut(s) | 1241, 1456, 1498, 1657, 1747 |
| DdeI | CTNAG | 6 cut(s) | 486, 594, 705, 735, 804, 1119 |
| DpnI | GATC | 5 cut(s) | 717, 797, 863, 929, 1328 |
| DpnII | GATC | 5 cut(s) | 715, 795, 861, 927, 1326 |
| DraI | TTTAAA | 1 cut(s) | 1398 |
| DriI | GACNNNNNGTC | 1 cut(s) | 159 |
| Eam1104I | CTCTTC | 2 cut(s) | 235, 762 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 159 |
| EarI | CTCTTC | 2 cut(s) | 235, 762 |
| EciI | GGCGGA | 1 cut(s) | 263 |
| Ecl136II | GAGCTC | 1 cut(s) | 598 |
| Eco105I | TACGTA | 1 cut(s) | 1451 |
| Eco130I | CCWWGG | 3 cut(s) | 516, 847, 1731 |
| Eco24I | GRGCYC | 2 cut(s) | 600, 1596 |
| Eco31I | GGTCTC | 3 cut(s) | 133, 1031, 1614 |
| Eco47I | GGWCC | 1 cut(s) | 267 |
| Eco53kI | GAGCTC | 1 cut(s) | 598 |
| Eco57I | CTGAAG | 3 cut(s) | 324, 573, 878 |
| Eco88I | CYCGRG | 2 cut(s) | 136, 959 |
| Eco91I | GGTNACC | 1 cut(s) | 182 |
| EcoICRI | GAGCTC | 1 cut(s) | 598 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1843 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1592 |
| EcoO65I | GGTNACC | 1 cut(s) | 182 |
| EcoT14I | CCWWGG | 3 cut(s) | 516, 847, 1731 |
| EcoT38I | GRGCYC | 2 cut(s) | 600, 1596 |
| ErhI | CCWWGG | 3 cut(s) | 516, 847, 1731 |
| Esp3I | CGTCTC | 1 cut(s) | 1590 |
| FaeI | CATG | 5 cut(s) | 1244, 1459, 1501, 1660, 1750 |
| FaqI | GGGAC | 1 cut(s) | 1821 |
| FatI | CATG | 5 cut(s) | 1240, 1455, 1497, 1656, 1746 |
| FauI | CCCGC | 2 cut(s) | 172, 1822 |
| FokI | GGATG | 3 cut(s) | 776, 902, 1797 |
| FriOI | GRGCYC | 2 cut(s) | 600, 1596 |
| FspBI | CTAG | 7 cut(s) | 954, 1089, 1491, 1556, 1664, 1673, 1820 |
| GlaI | GCGC | 2 cut(s) | 1101, 1422 |
| GsaI | CCCAGC | 2 cut(s) | 220, 257 |
| HaeII | RGCGCY | 1 cut(s) | 1103 |
| HaeIII | GGCC | 3 cut(s) | 1413, 1594, 1615 |
| HapII | CCGG | 2 cut(s) | 1336, 1596 |
| HgaI | GACGC | 2 cut(s) | 892, 1348 |
| HhaI | GCGC | 2 cut(s) | 1102, 1423 |
| Hin1I | GRCGYC | 1 cut(s) | 1340 |
| Hin1II | CATG | 5 cut(s) | 1244, 1459, 1501, 1660, 1750 |
| Hin6I | GCGC | 2 cut(s) | 1100, 1421 |
| HinP1I | GCGC | 2 cut(s) | 1100, 1421 |
| HindIII | AAGCTT | 3 cut(s) | 555, 1437, 1473 |
| HinfI | GANTC | 5 cut(s) | 134, 412, 488, 590, 709 |
| HpaII | CCGG | 2 cut(s) | 1336, 1596 |
| HphI | GGTGA | 7 cut(s) | 104, 176, 956, 1061, 1106, 1445, 1720 |
| Hpy166II | GTNNAC | 1 cut(s) | 854 |
| Hpy188I | TCNGA | 6 cut(s) | 300, 595, 708, 736, 932, 1061 |
| Hpy188III | TCNNGA | 8 cut(s) | 131, 138, 713, 719, 961, 1129, 1538, 1698 |
| Hpy8I | GTNNAC | 1 cut(s) | 854 |
| Hpy99I | CGWCG | 3 cut(s) | 154, 343, 605 |
| HpyAV | CCTTC | 9 cut(s) | 109, 215, 802, 943, 1006, 1133, 1218, 1508, 1642 |
| HpyCH4III | ACNGT | 1 cut(s) | 1546 |
| HpyCH4IV | ACGT | 4 cut(s) | 338, 1450, 1567, 1694 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 548, 554, 755, 1280, 1516 |
| HpyF3I | CTNAG | 6 cut(s) | 486, 594, 705, 735, 804, 1119 |
| HpySE526I | ACGT | 4 cut(s) | 338, 1450, 1567, 1694 |
| Hsp92I | GRCGYC | 1 cut(s) | 1340 |
| Hsp92II | CATG | 5 cut(s) | 1244, 1459, 1501, 1660, 1750 |
| HspAI | GCGC | 2 cut(s) | 1100, 1421 |
| Kzo9I | GATC | 5 cut(s) | 715, 795, 861, 927, 1326 |
| LmnI | GCTCC | 2 cut(s) | 250, 1082 |
| LweI | GCATC | 2 cut(s) | 92, 640 |
| MaeI | CTAG | 7 cut(s) | 954, 1089, 1491, 1556, 1664, 1673, 1820 |
| MaeII | ACGT | 4 cut(s) | 338, 1450, 1567, 1694 |
| MaeIII | GTNAC | 3 cut(s) | 6, 182, 189 |
| MalI | GATC | 5 cut(s) | 717, 797, 863, 929, 1328 |
| MboI | GATC | 5 cut(s) | 715, 795, 861, 927, 1326 |
| MflI | RGATCY | 1 cut(s) | 715 |
| MhlI | GDGCHC | 5 cut(s) | 600, 856, 1578, 1596, 1852 |
| MluCI | AATT | 9 cut(s) | 38, 54, 69, 119, 321, 774, 1362, 1799, 1853 |
| MlyI | GAGTC | 2 cut(s) | 128, 497 |
| MmeI | TCCRAC | 5 cut(s) | 567, 682, 819, 1039, 1060 |
| MroXI | GAANNNNTTC | 2 cut(s) | 986, 1190 |
| MseI | TTAA | 5 cut(s) | 324, 579, 663, 773, 1397 |
| MspA1I | CMGCKG | 4 cut(s) | 485, 551, 937, 1115 |
| MspCI | CTTAAG | 1 cut(s) | 662 |
| MspI | CCGG | 2 cut(s) | 1336, 1596 |
| MspR9I | CCNGG | 1 cut(s) | 1596 |
| MvnI | CGCG | 1 cut(s) | 1421 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 548, 554, 755, 1280, 1516 |
| NciI | CCSGG | 1 cut(s) | 1596 |
| NdeII | GATC | 5 cut(s) | 715, 795, 861, 927, 1326 |
| NheI | GCTAGC | 1 cut(s) | 1490 |
| NlaIII | CATG | 5 cut(s) | 1244, 1459, 1501, 1660, 1750 |
| NlaIV | GGNNCC | 5 cut(s) | 1072, 1111, 1593, 1594, 1600 |
| NmeAIII | GCCGAG | 2 cut(s) | 1099, 1662 |
| NmuCI | GTSAC | 1 cut(s) | 182 |
| NspI | RCATGY | 1 cut(s) | 1459 |
| NspV | TTCGAA | 2 cut(s) | 990, 1010 |
| PaeR7I | CTCGAG | 2 cut(s) | 136, 959 |
| PaqCI | CACCTGC | 1 cut(s) | 1265 |
| PdmI | GAANNNNTTC | 2 cut(s) | 986, 1190 |
| PfeI | GAWTC | 3 cut(s) | 412, 590, 709 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 193, 838 |
| PleI | GAGTC | 2 cut(s) | 128, 496 |
| PpsI | GAGTC | 2 cut(s) | 128, 496 |
| Ppu21I | YACGTR | 1 cut(s) | 1451 |
| PshBI | ATTAAT | 1 cut(s) | 579 |
| PsiI | TTATAA | 3 cut(s) | 320, 786, 1263 |
| Psp124BI | GAGCTC | 1 cut(s) | 600 |
| PspEI | GGTNACC | 1 cut(s) | 182 |
| PspFI | CCCAGC | 2 cut(s) | 216, 253 |
| PspN4I | GGNNCC | 5 cut(s) | 1072, 1111, 1593, 1594, 1600 |
| PspOMI | GGGCCC | 1 cut(s) | 1592 |
| PspPI | GGNCC | 3 cut(s) | 267, 1592, 1593 |
| PstI | CTGCAG | 2 cut(s) | 645, 900 |
| PstNI | CAGNNNCTG | 1 cut(s) | 193 |
| PsuI | RGATCY | 1 cut(s) | 715 |
| PvuII | CAGCTG | 3 cut(s) | 485, 551, 937 |
| SacI | GAGCTC | 1 cut(s) | 600 |
| SaqAI | TTAA | 5 cut(s) | 324, 579, 663, 773, 1397 |
| Sau3AI | GATC | 5 cut(s) | 715, 795, 861, 927, 1326 |
| Sau96I | GGNCC | 3 cut(s) | 267, 1592, 1593 |
| SchI | GAGTC | 2 cut(s) | 128, 497 |
| ScrFI | CCNGG | 1 cut(s) | 1596 |
| SduI | GDGCHC | 5 cut(s) | 600, 856, 1578, 1596, 1852 |
| SfaNI | GCATC | 2 cut(s) | 92, 640 |
| SfcI | CTRYAG | 3 cut(s) | 641, 896, 1545 |
| Sfr274I | CTCGAG | 2 cut(s) | 136, 959 |
| SfuI | TTCGAA | 2 cut(s) | 990, 1010 |
| SinI | GGWCC | 1 cut(s) | 267 |
| SlaI | CTCGAG | 2 cut(s) | 136, 959 |
| SmlI | CTYRAG | 3 cut(s) | 136, 662, 959 |
| SmoI | CTYRAG | 3 cut(s) | 136, 662, 959 |
| SnaBI | TACGTA | 1 cut(s) | 1451 |
| Sse9I | AATT | 9 cut(s) | 38, 54, 69, 119, 321, 774, 1362, 1799, 1853 |
| SsiI | CCGC | 4 cut(s) | 179, 248, 1113, 1815 |
| SspMI | CTAG | 7 cut(s) | 954, 1089, 1491, 1556, 1664, 1673, 1820 |
| SstI | GAGCTC | 1 cut(s) | 600 |
| StyD4I | CCNGG | 1 cut(s) | 1594 |
| StyI | CCWWGG | 3 cut(s) | 516, 847, 1731 |
| TaaI | ACNGT | 1 cut(s) | 1546 |
| TaiI | ACGT | 4 cut(s) | 341, 1453, 1570, 1697 |
| TaqII | GACCGA | 1 cut(s) | 360 |
| TasI | AATT | 9 cut(s) | 38, 54, 69, 119, 321, 774, 1362, 1799, 1853 |
| TauI | GCSGC | 1 cut(s) | 1115 |
| TfiI | GAWTC | 3 cut(s) | 412, 590, 709 |
| Tru1I | TTAA | 5 cut(s) | 324, 579, 663, 773, 1397 |
| Tru9I | TTAA | 5 cut(s) | 324, 579, 663, 773, 1397 |
| TscAI | CASTG | 4 cut(s) | 861, 905, 1470, 1774 |
| TseFI | GTSAC | 1 cut(s) | 182 |
| Tsp45I | GTSAC | 1 cut(s) | 182 |
| TspDTI | ATGAA | 8 cut(s) | 17, 66, 128, 345, 684, 780, 1229, 1486 |
| TspGWI | ACGGA | 2 cut(s) | 896, 1572 |
| TspRI | CASTG | 4 cut(s) | 861, 905, 1470, 1774 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 193, 838 |
| Vha464I | CTTAAG | 1 cut(s) | 662 |
| VneI | GTGCAC | 1 cut(s) | 852 |
| VpaK11BI | GGWCC | 1 cut(s) | 267 |
| VspI | ATTAAT | 1 cut(s) | 579 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1843 |
| XapI | RAATTY | 2 cut(s) | 69, 119 |
| XceI | RCATGY | 1 cut(s) | 1459 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1790 |
| XhoI | CTCGAG | 2 cut(s) | 136, 959 |
| XmnI | GAANNNNTTC | 2 cut(s) | 986, 1190 |
| XspI | CTAG | 7 cut(s) | 954, 1089, 1491, 1556, 1664, 1673, 1820 |