pycom15g35060

Copper-transporting ATPase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Forward (+)
34952366 .. 34954058
1693 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g35060.4

Sequence Viewer

Length: 1332 bp
ATGTCATATAACCATAGTAAGGAGTATTGTAGGATGACACATGTACAACAAGTTCACAATTTACAACATAAAATGGAAAATATGAGGAAAATAAGGAAATTTCGTAATGTAAGATACCCCAATTTTTCCAGCCGTTTTACACAAAATCGCCTCGATTCCAAGAACACTGTTATGAATGAAGGTGGAAAGAAGAGATCTTCCTCACCTGCTCAAGAGATGCTGGTTGAGAAAAAACTAAAGACTTCCTCTGCTGCTCGTAGGGGTTTACCAGCTGCCGAAAGGCCTGTGATTGACGTGACTTCTACTAATGGGAAGAAAAATGAGGCTACTAGATCTAAGCCTGTGGCACCTGCCATGTCAAGAATGGCTAGTACGATTGATGATATGATTGCTCAGCATAGAACTTCTGTCATGCCCCCAGTGCTGAAGTCTGTACTAAGATGTCCATTAGGAGCTAAGTTTGGTTCAGCTTTGGAAAGGTTTTCTATTATGAAGAGTGATAAGGTGGACACTGCTGCTAAAGTTGCTTCAAGGCCCACTCCCCCAGCTGTTGAGACTGATTCGCCTGCTGGGAAGGAGGAGACTGCTCACGTGGGCAGCTGTGAGAAATCCACTAAGTCTGCTTCTAGGGAGGCTACTGAGATCTGTGCGCTTTTGAAACCAAATCTGTTTGAAGACATGGATGCTTGTGCCAAGTTTGTCGATGACGTTAAAGGGGTTGTTTGCCCAAGTTCCTTTGTGAAGGATACGATCGAGTATAGGAAGATTGCACAACTTGCCATGGTTTTTTTTCCAAAACCAAAATCGAACCGAAATTTTAGTTCGGTTGGGTTTGGTTCATTTTTTTCAGTTTTTTTTTTTCAGTTCGGTTTATCTGGTTCGGTTTCGGCTTGGATTTTGTCATTTAGATACATATGTCAGTGTGTCTATGCATGTTTCGCTATCTCTAATGAAAAGATACATGATCTTTTTCTGTTTGGGGGACCAAAGATTAGATTACATGTTTCCATCTCTCCAGGAATGGGCTCACAGTTTTTCAATATTCATGAGGGAATCTTCAAAAAGTCGAAATTTAAACATCACACAAGTCAAATAAACCTTCAAGGTTTCATCACTTCATGTCTTGCACAAATAAAATCTTCCAAGTCCTCAAGCTTAACTTCTACTTGCCATTTCTACAAAAAAAAAAAAAAAAAAAAAAATGAACATGATGTAAAGCAAGCAATAAGTAAAATTACCTTTCTTAACTTCTTCACAAAACTCAATCTCCTCAATGGTTGGCTCATGATCAAAGCTTCCACAATTTTTGGACTCAAAGAACTACGATATTGA

Protein Analysis

444

Amino Acids

49.77

Weight (kDa)

9.94

Isoelectric Point (pI)

40.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 214, 358
Acc36I ACCTGC 2 cut(s) 214, 358
AccB1I GGYRCC 1 cut(s) 346
AcsI RAATTY 3 cut(s) 98, 814, 1070
AcuI CTGAAG 1 cut(s) 446
AcvI CACGTG 1 cut(s) 592
AfaI GTAC 3 cut(s) 45, 373, 435
AfiI CCNNNNNNNGG 2 cut(s) 19, 1022
AflIII ACRYGT 2 cut(s) 40, 1000
AgsI TTSAA 6 cut(s) 531, 658, 674, 1039, 1060, 1103
AjiI CACGTC 1 cut(s) 295
AjnI CCWGG 1 cut(s) 1015
AluBI AGCT 7 cut(s) 272, 455, 470, 548, 600, 1155, 1295
AluI AGCT 7 cut(s) 272, 455, 470, 548, 600, 1155, 1295
Alw26I GTCTC 2 cut(s) 548, 575
AoxI GGCC 2 cut(s) 281, 533
ApeKI GCWGC 4 cut(s) 251, 272, 515, 597
ApoI RAATTY 3 cut(s) 98, 814, 1070
AspLEI GCGC 1 cut(s) 652
AspS9I GGNCC 2 cut(s) 534, 983
AsuHPI GGTGA 1 cut(s) 195
AvaII GGWCC 1 cut(s) 983
BaeI ACNNNNGTAYC 2 cut(s) 901, 934
BanI GGYRCC 1 cut(s) 346
BanII GRGCYC 1 cut(s) 1028
BbrPI CACGTG 1 cut(s) 592
BbsI GAAGAC 1 cut(s) 681
BbvI GCAGC 4 cut(s) 238, 259, 502, 609
BccI CCATC 1 cut(s) 1016
BceAI ACGGC 1 cut(s) 117
BciT130I CCWGG 1 cut(s) 1017
BciVI GTATCC 1 cut(s) 739
BclI TGATCA 1 cut(s) 1287
BcoDI GTCTC 2 cut(s) 548, 575
BfaI CTAG 3 cut(s) 330, 369, 627
BfuAI ACCTGC 2 cut(s) 214, 358
BfuI GTATCC 1 cut(s) 739
BglII AGATCT 3 cut(s) 194, 332, 642
BisI GCNGC 4 cut(s) 252, 273, 516, 598
BlpI GCTNAGC 1 cut(s) 393
BlsI GCNGC 4 cut(s) 253, 274, 517, 599
Bme1390I CCNGG 1 cut(s) 1017
Bme18I GGWCC 1 cut(s) 983
BmgBI CACGTC 1 cut(s) 295
BmgT120I GGNCC 2 cut(s) 534, 983
BmiI GGNNCC 2 cut(s) 348, 984
BmrFI CCNGG 1 cut(s) 1017
BmrI ACTGGG 1 cut(s) 413
BmsI GCATC 2 cut(s) 207, 673
BmuI ACTGGG 1 cut(s) 413
BpiI GAAGAC 1 cut(s) 681
BpmI CTGGAG 1 cut(s) 999
Bpu1102I GCTNAGC 1 cut(s) 393
BpuEI CTTGAG 2 cut(s) 195, 1135
BsaAI YACGTR 1 cut(s) 592
BsaJI CCNNGG 1 cut(s) 780
BsaXI ACNNNNNCTCC 2 cut(s) 1251, 1281
Bsc4I CCNNNNNNNGG 2 cut(s) 19, 1022
Bse1I ACTGG 1 cut(s) 419
BseBI CCWGG 1 cut(s) 1017
BseDI CCNNGG 1 cut(s) 780
BseGI GGATG 2 cut(s) 39, 688
BseLI CCNNNNNNNGG 2 cut(s) 19, 1022
BseMII CTCAG 2 cut(s) 407, 630
BseNI ACTGG 1 cut(s) 419
BseRI GAGGAG 2 cut(s) 593, 1259
BseXI GCAGC 4 cut(s) 238, 259, 502, 609
BseYI CCCAGC 2 cut(s) 544, 569
Bsh1285I CGRYCG 1 cut(s) 753
BshFI GGCC 2 cut(s) 283, 535
BshNI GGYRCC 1 cut(s) 346
BsiEI CGRYCG 1 cut(s) 753
BslFI GGGAC 1 cut(s) 996
BslI CCNNNNNNNGG 2 cut(s) 19, 1022
BsmAI GTCTC 2 cut(s) 548, 575
BsmFI GGGAC 1 cut(s) 996
BsnI GGCC 2 cut(s) 283, 535
Bsp1286I GDGCHC 1 cut(s) 1028
Bsp1407I TGTACA 1 cut(s) 43
Bsp143I GATC 6 cut(s) 194, 332, 642, 750, 964, 1287
Bsp1720I GCTNAGC 1 cut(s) 393
Bsp19I CCATGG 1 cut(s) 780
BspANI GGCC 2 cut(s) 283, 535
BspCNI CTCAG 2 cut(s) 406, 631
BspHI TCATGA 2 cut(s) 1045, 1284
BspLI GGNNCC 2 cut(s) 348, 984
BspMI ACCTGC 2 cut(s) 214, 358
BspT107I GGYRCC 1 cut(s) 346
BsrGI TGTACA 1 cut(s) 43
BsrI ACTGG 1 cut(s) 419
BssECI CCNNGG 1 cut(s) 780
BssMI GATC 6 cut(s) 194, 332, 642, 750, 964, 1287
BssT1I CCWWGG 1 cut(s) 780
Bst2UI CCWGG 1 cut(s) 1017
Bst4CI ACNGT 2 cut(s) 169, 1032
Bst6I CTCTTC 2 cut(s) 185, 488
BstAPI GCANNNNNTGC 1 cut(s) 776
BstAUI TGTACA 1 cut(s) 43
BstBAI YACGTR 1 cut(s) 592
BstC8I GCNNGC 2 cut(s) 567, 1221
BstDEI CTNAG 6 cut(s) 336, 393, 437, 456, 615, 639
BstDSI CCRYGG 1 cut(s) 780
BstF5I GGATG 2 cut(s) 39, 688
BstHHI GCGC 1 cut(s) 652
BstKTI GATC 6 cut(s) 197, 335, 645, 753, 967, 1290
BstMAI GTCTC 2 cut(s) 548, 575
BstMBI GATC 6 cut(s) 194, 332, 642, 750, 964, 1287
BstMCI CGRYCG 1 cut(s) 753
BstMWI GCNNNNNNNGC 4 cut(s) 421, 524, 776, 938
BstNI CCWGG 1 cut(s) 1017
BstNSI RCATGY 3 cut(s) 44, 936, 1004
BstSCI CCNGG 1 cut(s) 1015
BstV1I GCAGC 4 cut(s) 238, 259, 502, 609
BstV2I GAAGAC 1 cut(s) 681
BstX2I RGATCY 3 cut(s) 194, 332, 642
BstYI RGATCY 3 cut(s) 194, 332, 642
BsuI GTATCC 1 cut(s) 739
BsuRI GGCC 2 cut(s) 283, 535
BtgI CCRYGG 1 cut(s) 780
BtrI CACGTC 1 cut(s) 295
BtsCI GGATG 2 cut(s) 39, 688
BtsI GCAGTG 1 cut(s) 510
BtsIMutI CAGTG 4 cut(s) 165, 426, 510, 926
BveI ACCTGC 2 cut(s) 214, 358
Cac8I GCNNGC 2 cut(s) 567, 1221
CciI TCATGA 2 cut(s) 1045, 1284
CfoI GCGC 1 cut(s) 652
Cfr13I GGNCC 2 cut(s) 534, 983
Csp6I GTAC 3 cut(s) 44, 372, 434
CspCI CAANNNNNGTGG 2 cut(s) 1288, 1323
CviQI GTAC 3 cut(s) 44, 372, 434
DdeI CTNAG 6 cut(s) 336, 393, 437, 456, 615, 639
DpnI GATC 6 cut(s) 196, 334, 644, 752, 966, 1289
DpnII GATC 6 cut(s) 194, 332, 642, 750, 964, 1287
DraI TTTAAA 1 cut(s) 1075
Eam1104I CTCTTC 2 cut(s) 185, 488
EarI CTCTTC 2 cut(s) 185, 488
Eco130I CCWWGG 1 cut(s) 780
Eco147I AGGCCT 1 cut(s) 283
Eco24I GRGCYC 1 cut(s) 1028
Eco47I GGWCC 1 cut(s) 983
Eco57I CTGAAG 1 cut(s) 446
Eco72I CACGTG 1 cut(s) 592
EcoRII CCWGG 1 cut(s) 1015
EcoT14I CCWWGG 1 cut(s) 780
EcoT22I ATGCAT 1 cut(s) 934
EcoT38I GRGCYC 1 cut(s) 1028
ErhI CCWWGG 1 cut(s) 780
FalI AAGNNNNNCTT 2 cut(s) 1144, 1176
FaqI GGGAC 1 cut(s) 996
FauNDI CATATG 1 cut(s) 914
FbaI TGATCA 1 cut(s) 1287
Fnu4HI GCNGC 4 cut(s) 252, 273, 516, 598
FokI GGATG 2 cut(s) 46, 695
FriOI GRGCYC 1 cut(s) 1028
Fsp4HI GCNGC 4 cut(s) 252, 273, 516, 598
FspBI CTAG 3 cut(s) 330, 369, 627
GlaI GCGC 1 cut(s) 651
GluI GCNGC 4 cut(s) 252, 273, 516, 598
GsaI CCCAGC 2 cut(s) 548, 573
GsuI CTGGAG 1 cut(s) 999
HaeIII GGCC 2 cut(s) 283, 535
HhaI GCGC 1 cut(s) 652
Hin6I GCGC 1 cut(s) 650
HinP1I GCGC 1 cut(s) 650
HindIII AAGCTT 2 cut(s) 1153, 1293
HinfI GANTC 4 cut(s) 155, 560, 1053, 1311
HphI GGTGA 1 cut(s) 195
Hpy166II GTNNAC 3 cut(s) 55, 266, 508
Hpy188III TCNNGA 4 cut(s) 212, 360, 1046, 1285
Hpy8I GTNNAC 3 cut(s) 55, 266, 508
HpyAV CCTTC 4 cut(s) 173, 568, 736, 1109
HpyCH4III ACNGT 2 cut(s) 169, 1032
HpyCH4IV ACGT 3 cut(s) 294, 591, 708
HpyCH4V TGCA 3 cut(s) 770, 932, 1127
HpyF10VI GCNNNNNNNGC 4 cut(s) 421, 524, 776, 938
HpyF3I CTNAG 6 cut(s) 336, 393, 437, 456, 615, 639
HpySE526I ACGT 3 cut(s) 294, 591, 708
HspAI GCGC 1 cut(s) 650
Ksp22I TGATCA 1 cut(s) 1287
Kzo9I GATC 6 cut(s) 194, 332, 642, 750, 964, 1287
LmnI GCTCC 1 cut(s) 452
Lsp1109I GCAGC 4 cut(s) 238, 259, 502, 609
LweI GCATC 2 cut(s) 207, 673
MaeI CTAG 3 cut(s) 330, 369, 627
MaeII ACGT 3 cut(s) 294, 591, 708
MaeIII GTNAC 1 cut(s) 295
MalI GATC 6 cut(s) 196, 334, 644, 752, 966, 1289
MboI GATC 6 cut(s) 194, 332, 642, 750, 964, 1287
MboII GAAGA 9 cut(s) 189, 202, 325, 505, 686, 775, 1048, 1131, 1243
MflI RGATCY 3 cut(s) 194, 332, 642
MhlI GDGCHC 1 cut(s) 1028
MluCI AATT 7 cut(s) 58, 98, 121, 814, 1070, 1233, 1302
MlyI GAGTC 1 cut(s) 1305
Mph1103I ATGCAT 1 cut(s) 934
MseI TTAA 4 cut(s) 711, 1074, 1157, 1245
MslI CAYNNNNRTG 1 cut(s) 170
MspA1I CMGCKG 3 cut(s) 272, 548, 600
MspR9I CCNGG 1 cut(s) 1017
MvaI CCWGG 1 cut(s) 1017
MwoI GCNNNNNNNGC 4 cut(s) 421, 524, 776, 938
NcoI CCATGG 1 cut(s) 780
NdeI CATATG 1 cut(s) 914
NdeII GATC 6 cut(s) 194, 332, 642, 750, 964, 1287
NlaIV GGNNCC 2 cut(s) 348, 984
NmuCI GTSAC 1 cut(s) 295
NsiI ATGCAT 1 cut(s) 934
NspI RCATGY 3 cut(s) 44, 936, 1004
PagI TCATGA 2 cut(s) 1045, 1284
PaqCI CACCTGC 2 cut(s) 214, 358
PceI AGGCCT 1 cut(s) 283
PciI ACATGT 2 cut(s) 40, 1000
PfeI GAWTC 3 cut(s) 155, 560, 1053
PfoI TCCNGGA 1 cut(s) 1015
PkrI GCNGC 4 cut(s) 253, 274, 517, 599
Ple19I CGATCG 1 cut(s) 753
PleI GAGTC 1 cut(s) 1305
PmaCI CACGTG 1 cut(s) 592
PmlI CACGTG 1 cut(s) 592
PpsI GAGTC 1 cut(s) 1305
Ppu21I YACGTR 1 cut(s) 592
PscI ACATGT 2 cut(s) 40, 1000
Psp6I CCWGG 1 cut(s) 1015
PspCI CACGTG 1 cut(s) 592
PspFI CCCAGC 2 cut(s) 544, 569
PspGI CCWGG 1 cut(s) 1015
PspN4I GGNNCC 2 cut(s) 348, 984
PspPI GGNCC 2 cut(s) 534, 983
PsrI GAACNNNNNNTAC 2 cut(s) 36, 68
PsuI RGATCY 3 cut(s) 194, 332, 642
PvuI CGATCG 1 cut(s) 753
PvuII CAGCTG 3 cut(s) 272, 548, 600
RsaI GTAC 3 cut(s) 45, 373, 435
RsaNI GTAC 3 cut(s) 44, 372, 434
RseI CAYNNNNRTG 1 cut(s) 170
SaqAI TTAA 4 cut(s) 711, 1074, 1157, 1245
SatI GCNGC 4 cut(s) 252, 273, 516, 598
Sau3AI GATC 6 cut(s) 194, 332, 642, 750, 964, 1287
Sau96I GGNCC 2 cut(s) 534, 983
SchI GAGTC 1 cut(s) 1305
ScrFI CCNGG 1 cut(s) 1017
SduI GDGCHC 1 cut(s) 1028
SfaNI GCATC 2 cut(s) 207, 673
SinI GGWCC 1 cut(s) 983
SmiMI CAYNNNNRTG 1 cut(s) 170
SmlI CTYRAG 2 cut(s) 210, 1150
SmoI CTYRAG 2 cut(s) 210, 1150
Sse9I AATT 7 cut(s) 58, 98, 121, 814, 1070, 1233, 1302
SseBI AGGCCT 1 cut(s) 283
SspI AATATT 1 cut(s) 1042
SspMI CTAG 3 cut(s) 330, 369, 627
StuI AGGCCT 1 cut(s) 283
StyD4I CCNGG 1 cut(s) 1015
StyI CCWWGG 1 cut(s) 780
TaaI ACNGT 2 cut(s) 169, 1032
TaiI ACGT 3 cut(s) 297, 594, 711
TaqI TCGA 5 cut(s) 153, 702, 753, 806, 1067
TasI AATT 7 cut(s) 58, 98, 121, 814, 1070, 1233, 1302
TatI WGTACW 2 cut(s) 43, 433
TfiI GAWTC 3 cut(s) 155, 560, 1053
Tru1I TTAA 4 cut(s) 711, 1074, 1157, 1245
Tru9I TTAA 4 cut(s) 711, 1074, 1157, 1245
TscAI CASTG 4 cut(s) 172, 426, 517, 926
TseFI GTSAC 1 cut(s) 295
TseI GCWGC 4 cut(s) 251, 272, 515, 597
Tsp45I GTSAC 1 cut(s) 295
TspDTI ATGAA 9 cut(s) 188, 192, 506, 828, 966, 1034, 1099, 1107, 1218
TspRI CASTG 4 cut(s) 172, 426, 517, 926
VpaK11BI GGWCC 1 cut(s) 983
XapI RAATTY 3 cut(s) 98, 814, 1070
XceI RCATGY 3 cut(s) 44, 936, 1004
XcmI CCANNNNNNNNNTGG 1 cut(s) 361
XspI CTAG 3 cut(s) 330, 369, 627
Zsp2I ATGCAT 1 cut(s) 934
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.