pycom07g06460
HSP70 Family

Heat shock cognate 70 kDa

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Reverse (-)
5763432 .. 5763860
429 bp
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UTR
Exon/CDS
Intron
pycom07g06460.1

Sequence Viewer

Length: 297 bp
ATGAAAACTTCCTCCGCTGCTCGTGAGAGTCTGCCTGCCACTAATAAGCTTGTGATTGACTTAACTTATTCCAAGGGGAAGAAAGATGAGGCTGCTAGATCTGAGCCCATGACACCTGCTCTGCCAAAGAGCAATAAGGTGGACTCTGCTGCTAAAGTAGTGCTAAAACCCATTCCCCTCGCTGTTGAGATTGATTCTCCTGTTGAGAAAGAGAAGGATGCTCGTATGGGCAATTGTGAGAAATCCACCAAACCTGTTTCTAGGGAAGAGAGGCTGTTGAGATTTATGCGCTCTTGA
Functional Annotation

Protein Analysis

99

Amino Acids

10.8

Weight (kDa)

9.63

Isoelectric Point (pI)

47.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 124
Acc36I ACCTGC 1 cut(s) 124
AciI CCGC 1 cut(s) 15
AluBI AGCT 1 cut(s) 49
AluI AGCT 1 cut(s) 49
ApeKI GCWGC 3 cut(s) 17, 92, 149
AspLEI GCGC 1 cut(s) 291
BanII GRGCYC 1 cut(s) 108
BauI CACGAG 1 cut(s) 21
BbvI GCAGC 3 cut(s) 4, 79, 136
BfaI CTAG 2 cut(s) 96, 261
BfuAI ACCTGC 1 cut(s) 124
BglII AGATCT 1 cut(s) 98
BisI GCNGC 3 cut(s) 18, 93, 150
BlsI GCNGC 3 cut(s) 19, 94, 151
BmsI GCATC 1 cut(s) 208
BsaJI CCNNGG 1 cut(s) 72
BseDI CCNNGG 1 cut(s) 72
BseGI GGATG 1 cut(s) 223
BseMII CTCAG 1 cut(s) 93
BseXI GCAGC 3 cut(s) 4, 79, 136
Bsp1286I GDGCHC 1 cut(s) 108
Bsp143I GATC 1 cut(s) 98
BspACI CCGC 1 cut(s) 15
BspCNI CTCAG 1 cut(s) 94
BspMI ACCTGC 1 cut(s) 124
BssECI CCNNGG 1 cut(s) 72
BssMI GATC 1 cut(s) 98
BssSI CACGAG 1 cut(s) 21
BssT1I CCWWGG 1 cut(s) 72
Bst2BI CACGAG 1 cut(s) 21
Bst6I CTCTTC 1 cut(s) 261
BstC8I GCNNGC 1 cut(s) 36
BstDEI CTNAG 1 cut(s) 102
BstF5I GGATG 1 cut(s) 223
BstHHI GCGC 1 cut(s) 291
BstKTI GATC 1 cut(s) 101
BstMBI GATC 1 cut(s) 98
BstV1I GCAGC 3 cut(s) 4, 79, 136
BstX2I RGATCY 1 cut(s) 98
BstYI RGATCY 1 cut(s) 98
BtsCI GGATG 1 cut(s) 223
BveI ACCTGC 1 cut(s) 124
Cac8I GCNNGC 1 cut(s) 36
CfoI GCGC 1 cut(s) 291
CviAII CATG 1 cut(s) 109
CviJI RGCY 4 cut(s) 49, 92, 106, 274
CviKI_1 RGCY 4 cut(s) 49, 92, 106, 274
DdeI CTNAG 1 cut(s) 102
DpnI GATC 1 cut(s) 100
DpnII GATC 1 cut(s) 98
Eam1104I CTCTTC 1 cut(s) 261
EarI CTCTTC 1 cut(s) 261
Eco130I CCWWGG 1 cut(s) 72
Eco24I GRGCYC 1 cut(s) 108
EcoT14I CCWWGG 1 cut(s) 72
EcoT38I GRGCYC 1 cut(s) 108
ErhI CCWWGG 1 cut(s) 72
FaeI CATG 1 cut(s) 112
FaiI YATR 3 cut(s) 110, 227, 287
FatI CATG 1 cut(s) 108
Fnu4HI GCNGC 3 cut(s) 18, 93, 150
FokI GGATG 1 cut(s) 230
FriOI GRGCYC 1 cut(s) 108
Fsp4HI GCNGC 3 cut(s) 18, 93, 150
FspBI CTAG 2 cut(s) 96, 261
GlaI GCGC 1 cut(s) 290
GluI GCNGC 3 cut(s) 18, 93, 150
HhaI GCGC 1 cut(s) 291
Hin1II CATG 1 cut(s) 112
Hin6I GCGC 1 cut(s) 289
HinP1I GCGC 1 cut(s) 289
HindIII AAGCTT 1 cut(s) 47
HinfI GANTC 3 cut(s) 28, 143, 194
Hpy166II GTNNAC 1 cut(s) 142
Hpy188I TCNGA 1 cut(s) 103
Hpy188III TCNNGA 2 cut(s) 23, 294
Hpy8I GTNNAC 1 cut(s) 142
HpyAV CCTTC 1 cut(s) 208
HpyF3I CTNAG 1 cut(s) 102
Hsp92II CATG 1 cut(s) 112
HspAI GCGC 1 cut(s) 289
Kzo9I GATC 1 cut(s) 98
LpnPI CCDG 4 cut(s) 48, 129, 213, 267
Lsp1109I GCAGC 3 cut(s) 4, 79, 136
LweI GCATC 1 cut(s) 208
MaeI CTAG 2 cut(s) 96, 261
MalI GATC 1 cut(s) 100
MboI GATC 1 cut(s) 98
MboII GAAGA 2 cut(s) 91, 278
MfeI CAATTG 1 cut(s) 232
MflI RGATCY 1 cut(s) 98
MhlI GDGCHC 1 cut(s) 108
MluCI AATT 1 cut(s) 232
MlyI GAGTC 2 cut(s) 37, 137
MnlI CCTC 4 cut(s) 22, 82, 188, 264
MseI TTAA 1 cut(s) 62
MspA1I CMGCKG 1 cut(s) 17
MunI CAATTG 1 cut(s) 232
NdeII GATC 1 cut(s) 98
NlaIII CATG 1 cut(s) 112
PaqCI CACCTGC 1 cut(s) 124
PfeI GAWTC 1 cut(s) 194
PkrI GCNGC 3 cut(s) 19, 94, 151
PleI GAGTC 2 cut(s) 36, 137
PpsI GAGTC 2 cut(s) 36, 137
PsuI RGATCY 1 cut(s) 98
SaqAI TTAA 1 cut(s) 62
SatI GCNGC 3 cut(s) 18, 93, 150
Sau3AI GATC 1 cut(s) 98
SchI GAGTC 2 cut(s) 37, 137
SduI GDGCHC 1 cut(s) 108
SetI ASST 4 cut(s) 51, 118, 141, 256
SfaNI GCATC 1 cut(s) 208
Sse9I AATT 1 cut(s) 232
SsiI CCGC 1 cut(s) 15
SspMI CTAG 2 cut(s) 96, 261
StyI CCWWGG 1 cut(s) 72
TasI AATT 1 cut(s) 232
TfiI GAWTC 1 cut(s) 194
Tru1I TTAA 1 cut(s) 62
Tru9I TTAA 1 cut(s) 62
TseI GCWGC 3 cut(s) 17, 92, 149
TspDTI ATGAA 1 cut(s) 17
XspI CTAG 2 cut(s) 96, 261
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.