pycom13g17300

Bifunctional monodehydroascorbate reductase and carbonic anhydrase nectarin-3-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Reverse (-)
13085882 .. 13086611
730 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g17300.2

Sequence Viewer

Length: 417 bp
ATGCCCCCGGTGCTAAAGTTTGTGCCAAAACATCTGTTGAGAGCTAAGTCCGGTTCACATTTGGAAAGGCTTGCTATTATGAAAAGCGATAAGGTCGACTCTGCTACTAAAATGGCATTAAGGCCCACTCTCTCTGCTGCTGAGACTGATTCGCTTGCTGGGAATGAGGAGACTGCTCGTATGGACAGCTGTGAGAAATCCACTGAGCCTGCTTCTGGGGAAGCTGCTGAAATATGTGTGTTCTTGAAACCAGATCTGCTTGAAAACATGGACGCTTGTGCCAAGTTTGTTGATGACGTTAAAAAGATTCAAGATCTTGAGTTTGCAGTTTCTGAGCTACATTTCGCTACTTGTGCAAAGGATGAAAAGTTGATTGCTGCTTATAATCAAGTTCCACTTCAAGAGAATCGTCGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

139

Amino Acids

15.22

Weight (kDa)

5.42

Isoelectric Point (pI)

43.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 384
AccI GTMKAC 1 cut(s) 96
AfiI CCNNNNNNNGG 1 cut(s) 215
AgsI TTSAA 4 cut(s) 247, 263, 311, 401
AluBI AGCT 4 cut(s) 44, 189, 224, 337
AluI AGCT 4 cut(s) 44, 189, 224, 337
Alw26I GTCTC 2 cut(s) 137, 164
AlwNI CAGNNNCTG 1 cut(s) 332
AoxI GGCC 1 cut(s) 122
ApeKI GCWGC 3 cut(s) 137, 224, 377
AspS9I GGNCC 1 cut(s) 123
AsuC2I CCSGG 1 cut(s) 8
BbvI GCAGC 3 cut(s) 124, 211, 364
BcnI CCSGG 1 cut(s) 8
BcoDI GTCTC 2 cut(s) 137, 164
BglII AGATCT 2 cut(s) 253, 313
BisI GCNGC 3 cut(s) 138, 225, 378
BlsI GCNGC 3 cut(s) 139, 226, 379
Bme1390I CCNGG 1 cut(s) 8
BmgT120I GGNCC 1 cut(s) 123
BmrFI CCNGG 1 cut(s) 8
BpuEI CTTGAG 1 cut(s) 338
BpuMI CCSGG 1 cut(s) 8
BsaJI CCNNGG 1 cut(s) 6
BsaWI WCCGGW 1 cut(s) 50
Bsc4I CCNNNNNNNGG 1 cut(s) 215
BseDI CCNNGG 1 cut(s) 6
BseGI GGATG 1 cut(s) 367
BseLI CCNNNNNNNGG 1 cut(s) 215
BseMII CTCAG 3 cut(s) 132, 195, 324
BseRI GAGGAG 1 cut(s) 182
BseXI GCAGC 3 cut(s) 124, 211, 364
BseYI CCCAGC 1 cut(s) 158
BshFI GGCC 1 cut(s) 124
BsiSI CCGG 2 cut(s) 8, 51
BslI CCNNNNNNNGG 1 cut(s) 215
BsmAI GTCTC 2 cut(s) 137, 164
BsnI GGCC 1 cut(s) 124
Bsp143I GATC 2 cut(s) 253, 313
BspANI GGCC 1 cut(s) 124
BspCNI CTCAG 3 cut(s) 133, 196, 325
BssECI CCNNGG 1 cut(s) 6
BssMI GATC 2 cut(s) 253, 313
BstC8I GCNNGC 3 cut(s) 72, 156, 210
BstDEI CTNAG 4 cut(s) 45, 141, 204, 333
BstF5I GGATG 1 cut(s) 367
BstKTI GATC 2 cut(s) 256, 316
BstMAI GTCTC 2 cut(s) 137, 164
BstMBI GATC 2 cut(s) 253, 313
BstMWI GCNNNNNNNGC 2 cut(s) 10, 353
BstSCI CCNGG 1 cut(s) 6
BstV1I GCAGC 3 cut(s) 124, 211, 364
BstX2I RGATCY 2 cut(s) 253, 313
BstYI RGATCY 2 cut(s) 253, 313
BsuRI GGCC 1 cut(s) 124
BtsCI GGATG 1 cut(s) 367
BtsIMutI CAGTG 1 cut(s) 201
Cac8I GCNNGC 3 cut(s) 72, 156, 210
CaiI CAGNNNCTG 1 cut(s) 332
Cfr13I GGNCC 1 cut(s) 123
CseI GACGC 1 cut(s) 281
CviAII CATG 1 cut(s) 268
CviJI RGCY 7 cut(s) 44, 70, 124, 189, 208, 224, 337
CviKI_1 RGCY 7 cut(s) 44, 70, 124, 189, 208, 224, 337
DdeI CTNAG 4 cut(s) 45, 141, 204, 333
DpnI GATC 2 cut(s) 255, 315
DpnII GATC 2 cut(s) 253, 313
FaeI CATG 1 cut(s) 271
FaiI YATR 5 cut(s) 80, 182, 235, 269, 384
FalI AAGNNNNNCTT 2 cut(s) 381, 413
FatI CATG 1 cut(s) 267
FblI GTMKAC 1 cut(s) 96
Fnu4HI GCNGC 3 cut(s) 138, 225, 378
FokI GGATG 1 cut(s) 374
Fsp4HI GCNGC 3 cut(s) 138, 225, 378
GluI GCNGC 3 cut(s) 138, 225, 378
GsaI CCCAGC 1 cut(s) 162
HaeIII GGCC 1 cut(s) 124
HapII CCGG 2 cut(s) 8, 51
HgaI GACGC 1 cut(s) 281
Hin1II CATG 1 cut(s) 271
HincII GTYRAC 1 cut(s) 97
HindII GTYRAC 1 cut(s) 97
HinfI GANTC 4 cut(s) 98, 149, 307, 406
HpaII CCGG 2 cut(s) 8, 51
Hpy166II GTNNAC 2 cut(s) 56, 97
Hpy188I TCNGA 1 cut(s) 334
Hpy188III TCNNGA 4 cut(s) 244, 311, 317, 401
Hpy8I GTNNAC 2 cut(s) 56, 97
Hpy99I CGWCG 1 cut(s) 414
HpyCH4IV ACGT 1 cut(s) 297
HpyCH4V TGCA 2 cut(s) 326, 356
HpyF10VI GCNNNNNNNGC 2 cut(s) 10, 353
HpyF3I CTNAG 4 cut(s) 45, 141, 204, 333
HpySE526I ACGT 1 cut(s) 297
Hsp92II CATG 1 cut(s) 271
Kzo9I GATC 2 cut(s) 253, 313
LpnPI CCDG 6 cut(s) 21, 64, 144, 201, 222, 264
Lsp1109I GCAGC 3 cut(s) 124, 211, 364
MaeII ACGT 1 cut(s) 297
MalI GATC 2 cut(s) 255, 315
MboI GATC 2 cut(s) 253, 313
MflI RGATCY 2 cut(s) 253, 313
MlyI GAGTC 1 cut(s) 92
MnlI CCTC 1 cut(s) 160
MseI TTAA 2 cut(s) 119, 300
MspA1I CMGCKG 1 cut(s) 189
MspI CCGG 2 cut(s) 8, 51
MspR9I CCNGG 1 cut(s) 8
MwoI GCNNNNNNNGC 2 cut(s) 10, 353
NciI CCSGG 1 cut(s) 8
NdeII GATC 2 cut(s) 253, 313
NlaIII CATG 1 cut(s) 271
PfeI GAWTC 3 cut(s) 149, 307, 406
PkrI GCNGC 3 cut(s) 139, 226, 379
PleI GAGTC 1 cut(s) 92
PpsI GAGTC 1 cut(s) 92
PsiI TTATAA 1 cut(s) 384
PspFI CCCAGC 1 cut(s) 158
PspPI GGNCC 1 cut(s) 123
PstNI CAGNNNCTG 1 cut(s) 332
PsuI RGATCY 2 cut(s) 253, 313
PvuII CAGCTG 1 cut(s) 189
SalI GTCGAC 1 cut(s) 95
SaqAI TTAA 2 cut(s) 119, 300
SatI GCNGC 3 cut(s) 138, 225, 378
Sau3AI GATC 2 cut(s) 253, 313
Sau96I GGNCC 1 cut(s) 123
SchI GAGTC 1 cut(s) 92
ScrFI CCNGG 1 cut(s) 8
SetI ASST 6 cut(s) 46, 96, 191, 226, 300, 339
SmlI CTYRAG 1 cut(s) 317
SmoI CTYRAG 1 cut(s) 317
StyD4I CCNGG 1 cut(s) 6
TaiI ACGT 1 cut(s) 300
TaqI TCGA 2 cut(s) 96, 412
TfiI GAWTC 3 cut(s) 149, 307, 406
Tru1I TTAA 2 cut(s) 119, 300
Tru9I TTAA 2 cut(s) 119, 300
TscAI CASTG 1 cut(s) 208
TseI GCWGC 3 cut(s) 137, 224, 377
TspDTI ATGAA 2 cut(s) 95, 378
TspRI CASTG 1 cut(s) 208
XmiI GTMKAC 1 cut(s) 96
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.