pycom15g26510

exonuclease activity

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Forward (+)
21419982 .. 21420350
369 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g26510.1

Sequence Viewer

Length: 369 bp
ATGGCTCAACTTAGCTCAGCTGCTGAAAAGATTGAAAAACTCAAATATGAACTCGCTATTTTGAAGGGGTATGATGTCTCTACCCCCACTTTTGTTCAGTTGGAAACCATTCACCAAGAAGTTGGCAGTTTGAAAGCTAAGCTTAATGCGATTGGGGCGATGTTGGAAGCTGCAAAAAAGGAAGTTGATTGGTTTGCACCAATGGTTCAGGACTTTGAGTGTGTCGACTCGGAGCTTTGGTCTGCATGTTATGCCAAGGACGAGAATTTATCTTCCCACCTAATTGTGGATGCAAATTTCCTCCTTCTTGTTCTTGGACAAAATTGCACCTATAAAACAAATAACAAGAGCCTTACGCTCCCACGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

123

Amino Acids

13.6

Weight (kDa)

5.12

Isoelectric Point (pI)

31.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 225
AcsI RAATTY 2 cut(s) 265, 295
AfiI CCNNNNNNNGG 1 cut(s) 286
AgsI TTSAA 3 cut(s) 35, 64, 133
AluBI AGCT 6 cut(s) 15, 20, 137, 142, 170, 235
AluI AGCT 6 cut(s) 15, 20, 137, 142, 170, 235
Alw26I GTCTC 1 cut(s) 82
AlwNI CAGNNNCTG 1 cut(s) 23
ApeKI GCWGC 2 cut(s) 20, 170
ApoI RAATTY 2 cut(s) 265, 295
Asp700I GAANNNNTTC 1 cut(s) 108
AsuHPI GGTGA 1 cut(s) 104
BbvI GCAGC 2 cut(s) 7, 157
BcoDI GTCTC 1 cut(s) 82
BisI GCNGC 2 cut(s) 21, 171
BlpI GCTNAGC 2 cut(s) 16, 138
BlsI GCNGC 2 cut(s) 22, 172
BmsI GCATC 1 cut(s) 280
Bpu1102I GCTNAGC 2 cut(s) 16, 138
BsaJI CCNNGG 1 cut(s) 255
BsaXI ACNNNNNCTCC 2 cut(s) 224, 254
Bsc4I CCNNNNNNNGG 1 cut(s) 286
BseDI CCNNGG 1 cut(s) 255
BseGI GGATG 1 cut(s) 295
BseLI CCNNNNNNNGG 1 cut(s) 286
BseMII CTCAG 1 cut(s) 30
BseXI GCAGC 2 cut(s) 7, 157
BslI CCNNNNNNNGG 1 cut(s) 286
BsmAI GTCTC 1 cut(s) 82
Bsp1720I GCTNAGC 2 cut(s) 16, 138
BspCNI CTCAG 1 cut(s) 29
BssECI CCNNGG 1 cut(s) 255
BssT1I CCWWGG 1 cut(s) 255
BstAPI GCANNNNNTGC 1 cut(s) 251
BstDEI CTNAG 3 cut(s) 11, 16, 138
BstF5I GGATG 1 cut(s) 295
BstMAI GTCTC 1 cut(s) 82
BstMWI GCNNNNNNNGC 2 cut(s) 155, 251
BstNSI RCATGY 1 cut(s) 249
BstV1I GCAGC 2 cut(s) 7, 157
BstXI CCANNNNNNTGG 1 cut(s) 122
BtgZI GCGATG 1 cut(s) 173
BtsCI GGATG 1 cut(s) 295
CaiI CAGNNNCTG 1 cut(s) 23
CviAII CATG 1 cut(s) 246
CviJI RGCY 8 cut(s) 5, 15, 20, 137, 142, 170, 235, 351
CviKI_1 RGCY 8 cut(s) 5, 15, 20, 137, 142, 170, 235, 351
DdeI CTNAG 3 cut(s) 11, 16, 138
Eco130I CCWWGG 1 cut(s) 255
EcoT14I CCWWGG 1 cut(s) 255
ErhI CCWWGG 1 cut(s) 255
FaeI CATG 1 cut(s) 249
FaiI YATR 5 cut(s) 48, 72, 247, 252, 333
FalI AAGNNNNNCTT 2 cut(s) 126, 158
FatI CATG 1 cut(s) 245
FblI GTMKAC 1 cut(s) 225
Fnu4HI GCNGC 2 cut(s) 21, 171
FokI GGATG 1 cut(s) 302
Fsp4HI GCNGC 2 cut(s) 21, 171
GluI GCNGC 2 cut(s) 21, 171
Hin1II CATG 1 cut(s) 249
HincII GTYRAC 1 cut(s) 226
HindII GTYRAC 1 cut(s) 226
HindIII AAGCTT 1 cut(s) 140
HinfI GANTC 1 cut(s) 227
HphI GGTGA 1 cut(s) 104
Hpy166II GTNNAC 1 cut(s) 226
Hpy188I TCNGA 1 cut(s) 232
Hpy188III TCNNGA 1 cut(s) 209
Hpy8I GTNNAC 1 cut(s) 226
HpyAV CCTTC 2 cut(s) 58, 314
HpyCH4V TGCA 5 cut(s) 173, 197, 245, 293, 327
HpyF10VI GCNNNNNNNGC 2 cut(s) 155, 251
HpyF3I CTNAG 3 cut(s) 11, 16, 138
Hsp92II CATG 1 cut(s) 249
LmnI GCTCC 2 cut(s) 232, 363
LpnPI CCDG 1 cut(s) 194
Lsp1109I GCAGC 2 cut(s) 7, 157
LweI GCATC 1 cut(s) 280
MboII GAAGA 1 cut(s) 264
MluCI AATT 4 cut(s) 265, 282, 295, 322
MlyI GAGTC 1 cut(s) 221
MmeI TCCRAC 2 cut(s) 81, 144
MnlI CCTC 1 cut(s) 311
MroXI GAANNNNTTC 1 cut(s) 108
MseI TTAA 1 cut(s) 144
MspA1I CMGCKG 1 cut(s) 20
MwoI GCNNNNNNNGC 2 cut(s) 155, 251
NlaIII CATG 1 cut(s) 249
NspI RCATGY 1 cut(s) 249
PdmI GAANNNNTTC 1 cut(s) 108
PkrI GCNGC 2 cut(s) 22, 172
PleI GAGTC 1 cut(s) 221
PpsI GAGTC 1 cut(s) 221
PstNI CAGNNNCTG 1 cut(s) 23
PvuII CAGCTG 1 cut(s) 20
SalI GTCGAC 1 cut(s) 224
SaqAI TTAA 1 cut(s) 144
SatI GCNGC 2 cut(s) 21, 171
SchI GAGTC 1 cut(s) 221
SetI ASST 8 cut(s) 17, 22, 139, 144, 172, 237, 282, 332
SfaNI GCATC 1 cut(s) 280
Sse9I AATT 4 cut(s) 265, 282, 295, 322
StyI CCWWGG 1 cut(s) 255
TaqI TCGA 1 cut(s) 225
TasI AATT 4 cut(s) 265, 282, 295, 322
Tru1I TTAA 1 cut(s) 144
Tru9I TTAA 1 cut(s) 144
TseI GCWGC 2 cut(s) 20, 170
TspDTI ATGAA 1 cut(s) 63
XapI RAATTY 2 cut(s) 265, 295
XceI RCATGY 1 cut(s) 249
XmiI GTMKAC 1 cut(s) 225
XmnI GAANNNNTTC 1 cut(s) 108
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.