pycom10g06120

Belongs to the pyruvate kinase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Reverse (-)
6887019 .. 6887962
944 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g06120.1

Sequence Viewer

Length: 561 bp
ATGTATACACAATCCAACCATTCATCAGTAAAACCCAATGGTTACACTATCACTAGAGAGTTTCCCGAGGTTTGTGTGCTGCTAAAGGTTGACCTACTTGAGGACGTCGATGCATGCGCCAAGTTTGTTGACAGTGTTGGGAAAGTTGTCATCCACTCAAACTCTTTTGCGAAATGTCCTGCCTATTCAAGAAGGTCCTCCCTGATTGCTACCATGCATAAGACCTTGATCTTGGTAGTTGAGTCTATACGAGTTCATCAAGATGCTGTCAAGTGTGCTAAGGAGGCCGAAGTGGCATTCGTGGCTCAGCTTCACTCGGCTGCTGAAAATATCGAGAATCTCAAATCTGAACTCGCCGTTTTGAAAGGGTCTAATGTCTTTGCCCCCACTTCTTTGCATCTAGAGATTGCTTATCAGGAGGTCACCCATTTGAATGCTAGGCTTAGTATGACTCAAGCGATGTTGGAAGCTGCAGAGAAGGAAATCAGTCGTGTTTCTCCGATGGTCGAGAACCTTGAGTGTGTCAATTCGGATGTCTCATCTCAAAGAGGTTGCCAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000287 GO:0003006 GO:0003674 GO:0003824 GO:0004743 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0006082 GO:0006090 GO:0006091 GO:0006096 GO:0006139 GO:0006163 GO:0006164 GO:0006165 GO:0006629 GO:0006725 GO:0006732 GO:0006733 GO:0006753 GO:0006754 GO:0006757 GO:0006793 GO:0006796 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009058 GO:0009108 GO:0009117 GO:0009123 GO:0009124 GO:0009126 GO:0009127 GO:0009132 GO:0009135 GO:0009141 GO:0009142 GO:0009144 GO:0009145 GO:0009150 GO:0009152 GO:0009156 GO:0009161 GO:0009165 GO:0009166 GO:0009167 GO:0009168 GO:0009179 GO:0009185 GO:0009199 GO:0009201 GO:0009205 GO:0009206 GO:0009259 GO:0009260 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009791 GO:0009987 GO:0010035 GO:0010038 GO:0010154 GO:0010431 GO:0016052 GO:0016053 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017144 GO:0018130 GO:0019359 GO:0019362 GO:0019363 GO:0019438 GO:0019439 GO:0019637 GO:0019693 GO:0019752 GO:0021700 GO:0022414 GO:0030955 GO:0031420 GO:0032501 GO:0032502 GO:0032504 GO:0032787 GO:0034404 GO:0034641 GO:0034654 GO:0034655 GO:0042221 GO:0042866 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044270 GO:0044271 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046031 GO:0046034 GO:0046390 GO:0046394 GO:0046434 GO:0046483 GO:0046496 GO:0046686 GO:0046700 GO:0046872 GO:0046939 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050896 GO:0051186 GO:0051188 GO:0055086 GO:0061458 GO:0071695 GO:0071704 GO:0072330 GO:0072521 GO:0072522 GO:0072524 GO:0072525 GO:0090407 GO:1901135 GO:1901137 GO:1901292 GO:1901293 GO:1901360 GO:1901361 GO:1901362 GO:1901564 GO:1901566 GO:1901575 GO:1901576
Pfam Domains
Protein Families

Protein Analysis

187

Amino Acids

20.45

Weight (kDa)

5.97

Isoelectric Point (pI)

43.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 108
AccI GTMKAC 1 cut(s) 5
AcyI GRCGYC 1 cut(s) 105
AfiI CCNNNNNNNGG 1 cut(s) 100
AgsI TTSAA 3 cut(s) 189, 364, 433
AluBI AGCT 2 cut(s) 310, 470
AluI AGCT 2 cut(s) 310, 470
Alw26I GTCTC 1 cut(s) 541
Ama87I CYCGRG 1 cut(s) 65
AoxI GGCC 1 cut(s) 285
ApeKI GCWGC 3 cut(s) 79, 320, 470
AspLEI GCGC 1 cut(s) 119
AspS9I GGNCC 1 cut(s) 195
AsuHPI GGTGA 1 cut(s) 415
AvaI CYCGRG 1 cut(s) 65
AvaII GGWCC 1 cut(s) 195
BbvI GCAGC 3 cut(s) 66, 307, 457
BccI CCATC 1 cut(s) 496
BceAI ACGGC 1 cut(s) 341
BcoDI GTCTC 1 cut(s) 541
BfaI CTAG 3 cut(s) 54, 401, 438
BfmI CTRYAG 1 cut(s) 471
BglI GCCNNNNNGGC 1 cut(s) 293
BisI GCNGC 3 cut(s) 80, 321, 471
BlpI GCTNAGC 1 cut(s) 306
BlsI GCNGC 3 cut(s) 81, 322, 472
Bme18I GGWCC 1 cut(s) 195
BmeT110I CYCGRG 1 cut(s) 65
BmgT120I GGNCC 1 cut(s) 195
BmsI GCATC 3 cut(s) 100, 253, 406
Bpu10I CCTNAGC 1 cut(s) 279
Bpu1102I GCTNAGC 1 cut(s) 306
BpuEI CTTGAG 3 cut(s) 119, 438, 536
BsaHI GRCGYC 1 cut(s) 105
BsaJI CCNNGG 1 cut(s) 66
Bsc4I CCNNNNNNNGG 1 cut(s) 100
BseDI CCNNGG 1 cut(s) 66
BseGI GGATG 2 cut(s) 150, 538
BseLI CCNNNNNNNGG 1 cut(s) 100
BseMII CTCAG 1 cut(s) 320
BseXI GCAGC 3 cut(s) 66, 307, 457
BshFI GGCC 1 cut(s) 287
BsiHKCI CYCGRG 1 cut(s) 65
BslI CCNNNNNNNGG 1 cut(s) 100
BsmAI GTCTC 1 cut(s) 541
BsmI GAATGC 2 cut(s) 296, 439
BsnI GGCC 1 cut(s) 287
BsoBI CYCGRG 1 cut(s) 65
Bsp143I GATC 1 cut(s) 228
Bsp1720I GCTNAGC 1 cut(s) 306
BspANI GGCC 1 cut(s) 287
BspCNI CTCAG 1 cut(s) 319
BspMAI CTGCAG 1 cut(s) 475
BssECI CCNNGG 1 cut(s) 66
BssMI GATC 1 cut(s) 228
BssNAI GTATAC 1 cut(s) 6
BssNI GRCGYC 1 cut(s) 105
Bst1107I GTATAC 1 cut(s) 6
Bst4CI ACNGT 1 cut(s) 134
BstACI GRCGYC 1 cut(s) 105
BstC8I GCNNGC 1 cut(s) 115
BstDEI CTNAG 3 cut(s) 279, 306, 443
BstEII GGTNACC 1 cut(s) 421
BstENI CCTNNNNNAGG 1 cut(s) 98
BstF5I GGATG 2 cut(s) 150, 538
BstHHI GCGC 1 cut(s) 119
BstKTI GATC 1 cut(s) 231
BstMAI GTCTC 1 cut(s) 541
BstMBI GATC 1 cut(s) 228
BstMWI GCNNNNNNNGC 3 cut(s) 284, 293, 302
BstNSI RCATGY 1 cut(s) 117
BstPI GGTNACC 1 cut(s) 421
BstSFI CTRYAG 1 cut(s) 471
BstV1I GCAGC 3 cut(s) 66, 307, 457
BstZ17I GTATAC 1 cut(s) 6
BsuRI GGCC 1 cut(s) 287
BtgZI GCGATG 1 cut(s) 473
BtsCI GGATG 2 cut(s) 150, 538
BtsIMutI CAGTG 1 cut(s) 139
Cac8I GCNNGC 1 cut(s) 115
CfoI GCGC 1 cut(s) 119
Cfr13I GGNCC 1 cut(s) 195
CviAII CATG 2 cut(s) 114, 214
CviJI RGCY 6 cut(s) 287, 305, 310, 320, 442, 470
CviKI_1 RGCY 6 cut(s) 287, 305, 310, 320, 442, 470
DdeI CTNAG 3 cut(s) 279, 306, 443
DpnI GATC 1 cut(s) 230
DpnII GATC 1 cut(s) 228
Eco47I GGWCC 1 cut(s) 195
Eco88I CYCGRG 1 cut(s) 65
Eco91I GGTNACC 1 cut(s) 421
EcoNI CCTNNNNNAGG 1 cut(s) 98
EcoO109I RGGNCCY 1 cut(s) 195
EcoO65I GGTNACC 1 cut(s) 421
EcoT22I ATGCAT 2 cut(s) 115, 219
FaeI CATG 2 cut(s) 117, 217
FaiI YATR 6 cut(s) 6, 115, 215, 219, 248, 449
FatI CATG 2 cut(s) 113, 213
FblI GTMKAC 1 cut(s) 5
Fnu4HI GCNGC 3 cut(s) 80, 321, 471
FokI GGATG 2 cut(s) 137, 545
Fsp4HI GCNGC 3 cut(s) 80, 321, 471
FspBI CTAG 3 cut(s) 54, 401, 438
GlaI GCGC 1 cut(s) 118
GluI GCNGC 3 cut(s) 80, 321, 471
HaeIII GGCC 1 cut(s) 287
HhaI GCGC 1 cut(s) 119
Hin1I GRCGYC 1 cut(s) 105
Hin1II CATG 2 cut(s) 117, 217
Hin6I GCGC 1 cut(s) 117
HinP1I GCGC 1 cut(s) 117
HincII GTYRAC 2 cut(s) 91, 130
HindII GTYRAC 2 cut(s) 91, 130
HinfI GANTC 3 cut(s) 242, 337, 451
HphI GGTGA 1 cut(s) 415
Hpy166II GTNNAC 3 cut(s) 6, 91, 130
Hpy188I TCNGA 3 cut(s) 349, 501, 532
Hpy188III TCNNGA 7 cut(s) 65, 189, 260, 334, 401, 416, 508
Hpy8I GTNNAC 3 cut(s) 6, 91, 130
Hpy99I CGWCG 1 cut(s) 110
HpyAV CCTTC 2 cut(s) 186, 472
HpyCH4III ACNGT 1 cut(s) 134
HpyCH4IV ACGT 1 cut(s) 105
HpyCH4V TGCA 4 cut(s) 113, 217, 397, 473
HpyF10VI GCNNNNNNNGC 3 cut(s) 284, 293, 302
HpyF3I CTNAG 3 cut(s) 279, 306, 443
HpySE526I ACGT 1 cut(s) 105
Hsp92I GRCGYC 1 cut(s) 105
Hsp92II CATG 2 cut(s) 117, 217
HspAI GCGC 1 cut(s) 117
Kzo9I GATC 1 cut(s) 228
LpnPI CCDG 3 cut(s) 192, 215, 401
Lsp1109I GCAGC 3 cut(s) 66, 307, 457
LweI GCATC 3 cut(s) 100, 253, 406
MaeI CTAG 3 cut(s) 54, 401, 438
MaeII ACGT 1 cut(s) 105
MaeIII GTNAC 2 cut(s) 41, 421
MalI GATC 1 cut(s) 230
MboI GATC 1 cut(s) 228
MluCI AATT 1 cut(s) 526
MlyI GAGTC 2 cut(s) 251, 445
MmeI TCCRAC 2 cut(s) 39, 444
MnlI CCTC 6 cut(s) 61, 94, 208, 277, 412, 542
Mph1103I ATGCAT 2 cut(s) 115, 219
MslI CAYNNNNRTG 2 cut(s) 261, 432
Mva1269I GAATGC 2 cut(s) 296, 439
MwoI GCNNNNNNNGC 3 cut(s) 284, 293, 302
NdeII GATC 1 cut(s) 228
NlaIII CATG 2 cut(s) 117, 217
NmeAIII GCCGAG 1 cut(s) 296
NmuCI GTSAC 1 cut(s) 421
NsiI ATGCAT 2 cut(s) 115, 219
NspI RCATGY 1 cut(s) 117
PaeI GCATGC 1 cut(s) 117
PctI GAATGC 2 cut(s) 296, 439
PfeI GAWTC 1 cut(s) 337
PkrI GCNGC 3 cut(s) 81, 322, 472
PleI GAGTC 2 cut(s) 250, 445
PpsI GAGTC 2 cut(s) 250, 445
PpuMI RGGWCCY 1 cut(s) 195
Psp5II RGGWCCY 1 cut(s) 195
PspEI GGTNACC 1 cut(s) 421
PspPI GGNCC 1 cut(s) 195
PspPPI RGGWCCY 1 cut(s) 195
PstI CTGCAG 1 cut(s) 475
RseI CAYNNNNRTG 2 cut(s) 261, 432
SatI GCNGC 3 cut(s) 80, 321, 471
Sau3AI GATC 1 cut(s) 228
Sau96I GGNCC 1 cut(s) 195
SchI GAGTC 2 cut(s) 251, 445
SfaNI GCATC 3 cut(s) 100, 253, 406
SfcI CTRYAG 1 cut(s) 471
SinI GGWCC 1 cut(s) 195
SmiMI CAYNNNNRTG 2 cut(s) 261, 432
SmlI CTYRAG 3 cut(s) 98, 453, 515
SmoI CTYRAG 3 cut(s) 98, 453, 515
SphI GCATGC 1 cut(s) 117
Sse9I AATT 1 cut(s) 526
SspMI CTAG 3 cut(s) 54, 401, 438
TaaI ACNGT 1 cut(s) 134
TaiI ACGT 1 cut(s) 108
TaqI TCGA 3 cut(s) 108, 333, 507
TasI AATT 1 cut(s) 526
TfiI GAWTC 1 cut(s) 337
TscAI CASTG 1 cut(s) 139
TseFI GTSAC 1 cut(s) 421
TseI GCWGC 3 cut(s) 79, 320, 470
Tsp45I GTSAC 1 cut(s) 421
TspDTI ATGAA 2 cut(s) 12, 245
TspRI CASTG 1 cut(s) 139
VpaK11BI GGWCC 1 cut(s) 195
XagI CCTNNNNNAGG 1 cut(s) 98
XbaI TCTAGA 1 cut(s) 400
XceI RCATGY 1 cut(s) 117
XmiI GTMKAC 1 cut(s) 5
XspI CTAG 3 cut(s) 54, 401, 438
ZraI GACGTC 1 cut(s) 106
Zsp2I ATGCAT 2 cut(s) 115, 219
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.