gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 321 |
| AccI | GTMKAC | 1 cut(s) | 263 |
| AciI | CCGC | 1 cut(s) | 87 |
| AfaI | GTAC | 1 cut(s) | 41 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 223, 255 |
| AluBI | AGCT | 1 cut(s) | 277 |
| AluI | AGCT | 1 cut(s) | 277 |
| Alw21I | GWGCWC | 1 cut(s) | 15 |
| Alw26I | GTCTC | 1 cut(s) | 298 |
| Alw44I | GTGCAC | 1 cut(s) | 11 |
| ApaLI | GTGCAC | 1 cut(s) | 11 |
| AspLEI | GCGC | 1 cut(s) | 54 |
| BaeGI | GKGCMC | 1 cut(s) | 15 |
| Bbv12I | GWGCWC | 1 cut(s) | 15 |
| BclI | TGATCA | 1 cut(s) | 144 |
| BcoDI | GTCTC | 1 cut(s) | 298 |
| BfmI | CTRYAG | 1 cut(s) | 153 |
| BfoI | RGCGCY | 1 cut(s) | 55 |
| BglII | AGATCT | 1 cut(s) | 188 |
| Bsa29I | ATCGAT | 1 cut(s) | 285 |
| BsaJI | CCNNGG | 1 cut(s) | 21 |
| Bse3DI | GCAATG | 1 cut(s) | 15 |
| BseCI | ATCGAT | 1 cut(s) | 285 |
| BseDI | CCNNGG | 1 cut(s) | 21 |
| BseGI | GGATG | 1 cut(s) | 130 |
| BseMI | GCAATG | 1 cut(s) | 15 |
| BseMII | CTCAG | 1 cut(s) | 261 |
| BseSI | GKGCMC | 1 cut(s) | 15 |
| BshVI | ATCGAT | 1 cut(s) | 285 |
| BsiHKAI | GWGCWC | 1 cut(s) | 15 |
| BsmAI | GTCTC | 1 cut(s) | 298 |
| BsmI | GAATGC | 1 cut(s) | 27 |
| Bsp1286I | GDGCHC | 1 cut(s) | 15 |
| Bsp143I | GATC | 3 cut(s) | 144, 188, 286 |
| BspACI | CCGC | 1 cut(s) | 87 |
| BspCNI | CTCAG | 1 cut(s) | 262 |
| BspDI | ATCGAT | 1 cut(s) | 285 |
| BsrDI | GCAATG | 1 cut(s) | 15 |
| BssECI | CCNNGG | 1 cut(s) | 21 |
| BssMI | GATC | 3 cut(s) | 144, 188, 286 |
| BssT1I | CCWWGG | 1 cut(s) | 21 |
| Bst4CI | ACNGT | 1 cut(s) | 318 |
| Bst6I | CTCTTC | 2 cut(s) | 99, 179 |
| BstC8I | GCNNGC | 2 cut(s) | 56, 89 |
| BstDEI | CTNAG | 4 cut(s) | 36, 62, 270, 300 |
| BstF5I | GGATG | 1 cut(s) | 130 |
| BstH2I | RGCGCY | 1 cut(s) | 55 |
| BstHHI | GCGC | 1 cut(s) | 54 |
| BstKTI | GATC | 3 cut(s) | 147, 191, 289 |
| BstMAI | GTCTC | 1 cut(s) | 298 |
| BstMBI | GATC | 3 cut(s) | 144, 188, 286 |
| BstSFI | CTRYAG | 1 cut(s) | 153 |
| BstSLI | GKGCMC | 1 cut(s) | 15 |
| BstX2I | RGATCY | 1 cut(s) | 188 |
| BstYI | RGATCY | 1 cut(s) | 188 |
| Bsu15I | ATCGAT | 1 cut(s) | 285 |
| BsuTUI | ATCGAT | 1 cut(s) | 285 |
| BtsCI | GGATG | 1 cut(s) | 130 |
| BtsI | GCAGTG | 1 cut(s) | 147 |
| BtsIMutI | CAGTG | 1 cut(s) | 147 |
| Cac8I | GCNNGC | 2 cut(s) | 56, 89 |
| CfoI | GCGC | 1 cut(s) | 54 |
| ClaI | ATCGAT | 1 cut(s) | 285 |
| Csp6I | GTAC | 1 cut(s) | 40 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 157, 192 |
| CviAII | CATG | 1 cut(s) | 44 |
| CviJI | RGCY | 7 cut(s) | 58, 91, 160, 218, 229, 258, 277 |
| CviKI_1 | RGCY | 7 cut(s) | 58, 91, 160, 218, 229, 258, 277 |
| CviQI | GTAC | 1 cut(s) | 40 |
| DdeI | CTNAG | 4 cut(s) | 36, 62, 270, 300 |
| DpnI | GATC | 3 cut(s) | 146, 190, 288 |
| DpnII | GATC | 3 cut(s) | 144, 188, 286 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 321 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 321 |
| Eam1104I | CTCTTC | 2 cut(s) | 99, 179 |
| EarI | CTCTTC | 2 cut(s) | 99, 179 |
| Eco130I | CCWWGG | 1 cut(s) | 21 |
| EcoT14I | CCWWGG | 1 cut(s) | 21 |
| ErhI | CCWWGG | 1 cut(s) | 21 |
| FaeI | CATG | 1 cut(s) | 47 |
| FaiI | YATR | 2 cut(s) | 45, 252 |
| FatI | CATG | 1 cut(s) | 43 |
| FauI | CCCGC | 1 cut(s) | 80 |
| FbaI | TGATCA | 1 cut(s) | 144 |
| FblI | GTMKAC | 1 cut(s) | 263 |
| FokI | GGATG | 1 cut(s) | 137 |
| GlaI | GCGC | 1 cut(s) | 53 |
| HaeII | RGCGCY | 1 cut(s) | 55 |
| HhaI | GCGC | 1 cut(s) | 54 |
| Hin1II | CATG | 1 cut(s) | 47 |
| Hin6I | GCGC | 1 cut(s) | 52 |
| HinP1I | GCGC | 1 cut(s) | 52 |
| HindIII | AAGCTT | 1 cut(s) | 275 |
| Hpy166II | GTNNAC | 3 cut(s) | 13, 209, 264 |
| Hpy188I | TCNGA | 3 cut(s) | 99, 144, 291 |
| Hpy188III | TCNNGA | 1 cut(s) | 77 |
| Hpy8I | GTNNAC | 3 cut(s) | 13, 209, 264 |
| HpyAV | CCTTC | 1 cut(s) | 94 |
| HpyCH4III | ACNGT | 1 cut(s) | 318 |
| HpyCH4V | TGCA | 1 cut(s) | 13 |
| HpyF3I | CTNAG | 4 cut(s) | 36, 62, 270, 300 |
| Hsp92II | CATG | 1 cut(s) | 47 |
| HspAI | GCGC | 1 cut(s) | 52 |
| Ksp22I | TGATCA | 1 cut(s) | 144 |
| Kzo9I | GATC | 3 cut(s) | 144, 188, 286 |
| LpnPI | CCDG | 2 cut(s) | 40, 45 |
| MalI | GATC | 3 cut(s) | 146, 190, 288 |
| MboI | GATC | 3 cut(s) | 144, 188, 286 |
| MboII | GAAGA | 6 cut(s) | 16, 116, 183, 196, 231, 235 |
| MflI | RGATCY | 1 cut(s) | 188 |
| MhlI | GDGCHC | 1 cut(s) | 15 |
| MnlI | CCTC | 4 cut(s) | 105, 121, 205, 304 |
| MseI | TTAA | 1 cut(s) | 320 |
| Mva1269I | GAATGC | 1 cut(s) | 27 |
| NdeII | GATC | 3 cut(s) | 144, 188, 286 |
| NlaIII | CATG | 1 cut(s) | 47 |
| PctI | GAATGC | 1 cut(s) | 27 |
| PsuI | RGATCY | 1 cut(s) | 188 |
| RsaI | GTAC | 1 cut(s) | 41 |
| RsaNI | GTAC | 1 cut(s) | 40 |
| SaqAI | TTAA | 1 cut(s) | 320 |
| Sau3AI | GATC | 3 cut(s) | 144, 188, 286 |
| SduI | GDGCHC | 1 cut(s) | 15 |
| SetI | ASST | 3 cut(s) | 97, 279, 296 |
| SfcI | CTRYAG | 1 cut(s) | 153 |
| SsiI | CCGC | 1 cut(s) | 87 |
| StyI | CCWWGG | 1 cut(s) | 21 |
| TaaI | ACNGT | 1 cut(s) | 318 |
| TaqI | TCGA | 1 cut(s) | 285 |
| Tru1I | TTAA | 1 cut(s) | 320 |
| Tru9I | TTAA | 1 cut(s) | 320 |
| TscAI | CASTG | 1 cut(s) | 154 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| TspRI | CASTG | 1 cut(s) | 154 |
| VneI | GTGCAC | 1 cut(s) | 11 |
| XmiI | GTMKAC | 1 cut(s) | 263 |