pycom01g04450

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Forward (+)
3321169 .. 3326927
5759 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g04450.11

Sequence Viewer

Length: 3888 bp
ATGTTAGGTTTTATTCTCACTAAAGACAAATTTGAATTACATTATTATAGCTCGTATATTATGAGGCCTAGCCCACACTTCTACTCCCTTAGTGCAGAAAATGTCATTCGTTCATTCAAAATAAAAAAAAACAAGCAAACGTTTCCATTTGCTAGTAAAATTATTTTTATGAGTCGTATGTTATTAGGTCTCGTTACCAAAGAGACTATCAATAACAACTTTTCCACCAACTACTTTTCAGTCTTACTTTTCTCCTTCAAACTCAAAGTCACAACTTTCTTGCCACTTTGTTTCCTGAATCTCGATTTTGATTTTACTTATTTTTGCACGCAACACGGATTACTATTTTTACACGCAACATTGATTATTGTTTCTATACATTTTTGTACATACTATCATCAACCATTGTACCCCACTATCGTGTATTATGTACGGACGGAGTGGAACAAATATAAATTCAAGAACTCGTGTCAACCCGATGAAGTGGTTTTCAACTCCATTAATGAGCTGTGTTGGCTGACACCTGGAAGTGCCTATATACACAACTACGTAGTGAGCAGGTATGGACCCATTTCACACGTGATACAGAGCATAAGACAATTGCAAACTGGGAGTGCCACATTTCCTCGTCGATACAGAACCATGCTACTAGAACCTGGAGGGGTGAAAAATAGAAAGTGTGAGTGGTCAAAACAAAGACTTTCAAAATCATTTCCATTATCAAAGGTACATACTACGTATAAGTATGAAATCAAATGTATAACAATAGTAAATCCAAAAGTATACCACGACATAGCATCTCGTTATCGAAAGTCACCTATGGTGACATGTACGATTGCACCCATATTTCCTCAATCAATGCTAGCACATAAGTCGAAGTCATGTATAGTGACTTGTACGACTTATCCATCTCTCATCAATCAATGCTACAACATGCTAGCCAATAACTCATCAATATGCAATAACATGCTAGCCAATAACATGCTAGCCAATACCAATAGCTCATCAATATGCAATAACATGCTAGTTAATAGCTCAATAACATGCTACAACATGCTAACCAATAGCTCAATACCAATAGCCAATAACTCATCAATAAGTATATCGGCACATGAGTCGGAACCACCTAAAGTGGTCTGTACGACAAACTGGTTCACCTATGAGTCGGAACCACCTAATGTGGTCTGTACGACAGACTGGCACCTACCTTGGATTCAAGGTGAGCGTGTGGTGCGGGAGGTGAACGATCACGTGAAGGCTAGGCCATGGCCACGAGTAGGAACACTAACACCGGGGTGTAGGTTTATGAGCTCTAATATATCTCAACACAATCGTACCCACTACCATCATTATCATCAAAGTCACTTCAAAACATTTACAATAATTAGATTCAGCGTGAAATGCATAATCTGTAACGCCCCACTTCCAAACTACTTAGTTTTGGGAATAATTATTGTTAACCACCAACACATAAGGTTAAAACTCACATTTTACACCAATGTCCCTCACATTGTTCGATTCCCCAAACAAAGCTATTGTCTCAATTATTTAATCTCACATCTTGTATGGCTGCATCTAACGTCTCTTCACGTTAATTATTTGCATGTGACATGCATAAATCAATTTAGAAACGTTTGTGGAACTATCAATTATATACATATGATAAGAAGGAACAGATCCACTTACCTGGAGTCCACTGGCGCCTGTGACCAATTATCTAATCACATCTCAAAACTCTTATCAATAGAATACATAATTCACGTAAAACACATCCTCAAGGATGTTCTAAAATACGACGGCAGGGTCTACACCCTATATAGCTCGACCCAGAAGATCTGCATATCAGATTCCCAATCTACAACTCCCAAAGATCCACAATATCTCCGCCAATTGCCCAAAACCAAATGGCGGTTAACATTTATTTTACTAAATTATAAATCCAATTTGGGAAGATCCATTACGTATTATAATGTATCCAAGTTTGGTGACGATCCAACGGTCGGATCGTCGATTCACATTTTTATCAACATTGGCGGCCCACTAGCCACGCGCCGCCGTGGGTGGCGGTCTGCCGCCCCGACTCGCCGGAAAATCCAACTATTTCCAAAAATTCTCAAAATTTACAGAAATGAAGATCTTATGGACGGAAGATCGATCAATTTTTCCCACAAAGCCGGCGGGTGCCTAAAGCTTCTCGGTGTTGATTCGTCTTCTACAGTGGTCCAACGGGGTCAAGGTTGGTTGGGTTTTGCTCCTGGGATGATGGGCTACAAAGCCCAAGTGGTGGCATCTGCCATCGCTTTGCCGATTTGCCGAAAAATCGAAAAGAGTGGCTGGAGCACTGTTGATTTTCGTCGACTTTCGTGGGGAATGAGAGTTTCAAGATGGTGGTGGTGGTGTCGAAAAACTCCACCAGAGTTGGCCGGAATCGGCCTTGGAAAATGGGAGCTCGCAGTGGGTATGGGTCGACGGGAAGGCTACTTCCCTTTTCTTTTCTTTTTTCCTCTTCTTCTTTCCTCATTTTTGATTGGGCTTCACCCCACAAATTTGAACGTCCGTAACTATACCATTATAATCCGGACTTGCAAACGGCTTTCGCCTATGCTCTCACATCTCCTAAACCGATGTCACGCTTTTAAAATTAATAAAAATGTAAAATTTGGAACGGGTTGTCACACCACTAACTTGAAGGTCTCTCATTTTTTTTTGTTGTTGCTTCTTTGGTGCAACTTCGTTGGCATTTTTATTTTTCCGATGGTTGCATCTGTTTGTTGCTCGTTTGTAAAGTCTTTTCTCTACAATATATTTTATTTTATTTTAGTTTTTCCAAATGAAAAAGGTTGTGAAGGTAAAACAACTTTTACTTGGTCAACTTATTTTATACATGAACAAATGAACATGGTCAATTTAACACATACACTTTATACAACACACAAATTGTATAAAAATGACGTCATAACAGTCTATGGGCCTACTGGGCTTAGATATACAATTGACTTTTTACTATTTGGGCTCATGATATTTAACAAAAGCTTTCTATTAAGTTACAAAATAAAACATAATAAATTGCAGCTCAAGTGGTTAATAAAATTCACTAGTGCACTCAATGTCTTAGATTCGAGTCATCCTCCTCCACTATTGCTTTGTCTCAACAACATAAAAACTCACATAACAAAACAAATCAACTTAGTCATCTTCATTTTGGTAACTAACAATGATCAAATATTTTACTTGATTTTAAAATTAGTGATAGTTTTGAATGAAATCTTGTTGCTTATATCTAAACGAGTGATATATCCAAACAGATACGCAAAGAACGAGGCTCGGGACTCAAATCGATTCCTTAGTGTTCCAACTAGTTTTAGAACAAAAAAAAAAAATTGTGATTTTTATGAGAGCATAGAAGAAAAAGTCGTAATTGTAATTCCTCTCTCTAATCTTTTTCAAGCCATAGTAAAGCAAATCAATGCTAAGAAGACTCTCTCAAAATTGACTCTTCATGAACTATTTGTTACCTTACATTTTAACCTCAATTTTCTTGTCAACCTTAAGAATATAGAAACTTGTCATTTCTTAACAATTTGTAGAAGAGTTATAAAAACTGATAAAAAAATCATTACAAGGGTGGGTACAGTGAAACAAAACACAGGTTCAGATGTATATTATATTATATTTTATATATATATATATATATATATATATATATATATATTTAGGGGTGTGATATCTAATAGGGGTGTGATATCCATACACCCCATTTTACTTCTCACACATCTTTTTAATTTTCGATCGTCAGATCGAAGTAATTTGGGATGTGCGAATAGCATATCCCTATATACACACACACACACTAAAACTGAGTTTTGGAGTGGCACTATTGATCTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1296

Amino Acids

150.13

Weight (kDa)

9.74

Isoelectric Point (pI)

40.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 1935, 1968, 2573, 3596
AasI GACNNNNNNGTC 1 cut(s) 1802
AatII GACGTC 1 cut(s) 2955
Acc36I ACCTGC 1 cut(s) 549
AccB1I GGYRCC 3 cut(s) 1200, 1700, 2181
AccB7I CCANNNNNTGG 1 cut(s) 2284
AccI GTMKAC 4 cut(s) 783, 1806, 2356, 2467
AccII CGCG 1 cut(s) 2050
AccIII TCCGGA 1 cut(s) 2577
AciI CCGC 8 cut(s) 1234, 1885, 1909, 2034, 2053, 2065, 2073, 2178
AclI AACGTT 2 cut(s) 140, 1632
AclWI GGATC 5 cut(s) 1671, 1865, 1947, 1985, 2011
AcoI YGGCCR 2 cut(s) 1268, 2421
AcsI RAATTY 7 cut(s) 29, 455, 2109, 2118, 2545, 2657, 3089
AcvI CACGTG 2 cut(s) 580, 1252
AcyI GRCGYC 2 cut(s) 1701, 2952
AfiI CCNNNNNNNGG 4 cut(s) 1277, 1908, 2000, 2284
AflII CTTAAG 1 cut(s) 3548
AflIII ACRYGT 2 cut(s) 577, 827
AhlI ACTAGT 2 cut(s) 3095, 3356
AjnI CCWGG 4 cut(s) 523, 655, 1686, 2254
AleI CACNNNNGTG 2 cut(s) 419, 1294
Alw21I GWGCWC 4 cut(s) 1313, 2342, 2451, 3103
Alw26I GTCTC 6 cut(s) 194, 197, 1544, 1587, 2698, 3152
Alw44I GTGCAC 1 cut(s) 3099
AlwI GGATC 5 cut(s) 1671, 1865, 1947, 1985, 2011
Ama87I CYCGRG 1 cut(s) 3324
Aor13HI TCCGGA 1 cut(s) 2577
AoxI GGCC 7 cut(s) 65, 1262, 1268, 2035, 2421, 2431, 2969
ApaLI GTGCAC 1 cut(s) 3099
ApeKI GCWGC 2 cut(s) 1570, 3070
ApoI RAATTY 7 cut(s) 29, 455, 2109, 2118, 2545, 2657, 3089
ArsI GACNNNNNNTTYG 4 cut(s) 252, 284, 1522, 1554
AseI ATTAAT 2 cut(s) 501, 2643
AspLEI GCGC 2 cut(s) 1703, 2052
AspS9I GGNCC 4 cut(s) 566, 2036, 2221, 2969
AsuC2I CCSGG 1 cut(s) 1293
AsuHPI GGTGA 8 cut(s) 676, 807, 835, 1147, 1232, 1252, 1997, 2528
AsuNHI GCTAGC 4 cut(s) 862, 937, 970, 985
AvaI CYCGRG 1 cut(s) 3324
AvaII GGWCC 2 cut(s) 566, 2221
BaeGI GKGCMC 1 cut(s) 3103
BaeI ACNNNNGTAYC 4 cut(s) 392, 425, 1318, 1351
BalI TGGCCA 1 cut(s) 1270
BanI GGYRCC 3 cut(s) 1200, 1700, 2181
BanII GRGCYC 3 cut(s) 1313, 2451, 3015
BarI GAAGNNNNNNTAC 2 cut(s) 1942, 1974
BauI CACGAG 2 cut(s) 466, 1272
BbrPI CACGTG 2 cut(s) 580, 1252
BbsI GAAGAC 2 cut(s) 2202, 3482
Bbv12I GWGCWC 4 cut(s) 1313, 2342, 2451, 3103
BbvI GCAGC 2 cut(s) 1557, 3082
BccI CCATC 6 cut(s) 916, 1353, 2257, 2303, 2379, 2749
BceAI ACGGC 3 cut(s) 1813, 2040, 2606
BcgI CGANNNNNNTGC 4 cut(s) 855, 889, 1098, 1132
BciT130I CCWGG 4 cut(s) 525, 657, 1688, 2256
BciVI GTATCC 1 cut(s) 1984
BclI TGATCA 1 cut(s) 3217
BcnI CCSGG 1 cut(s) 1293
BcoDI GTCTC 6 cut(s) 194, 197, 1544, 1587, 2698, 3152
BcuI ACTAGT 2 cut(s) 3095, 3356
BfmI CTRYAG 2 cut(s) 2214, 3884
BfoI RGCGCY 1 cut(s) 1704
BfrI CTTAAG 1 cut(s) 3548
BfuAI ACCTGC 1 cut(s) 549
BfuI GTATCC 1 cut(s) 1984
BglI GCCNNNNNGGC 1 cut(s) 2977
BglII AGATCT 2 cut(s) 1833, 2134
BisI GCNGC 5 cut(s) 1571, 2035, 2053, 2073, 3071
BlsI GCNGC 5 cut(s) 1572, 2036, 2054, 2074, 3072
Bme1390I CCNGG 5 cut(s) 525, 657, 1293, 1688, 2256
Bme18I GGWCC 2 cut(s) 566, 2221
BmeT110I CYCGRG 1 cut(s) 3324
BmgT120I GGNCC 4 cut(s) 566, 2036, 2221, 2969
BmiI GGNNCC 6 cut(s) 568, 1122, 1170, 1202, 1702, 2183
BmrFI CCNGG 5 cut(s) 525, 657, 1293, 1688, 2256
BmrI ACTGGG 2 cut(s) 618, 2985
BmsI GCATC 4 cut(s) 806, 1582, 2297, 2771
BmtI GCTAGC 4 cut(s) 866, 941, 974, 989
BmuI ACTGGG 2 cut(s) 618, 2985
BpiI GAAGAC 2 cut(s) 2202, 3482
BplI GAGNNNNNCTC 2 cut(s) 3112, 3144
BpmI CTGGAG 3 cut(s) 678, 1709, 2356
BpuEI CTTGAG 2 cut(s) 1760, 3059
BpuMI CCSGG 1 cut(s) 1293
Bsa29I ATCGAT 2 cut(s) 2153, 3337
BsaAI YACGTR 6 cut(s) 550, 580, 738, 1252, 1762, 1962
BsaHI GRCGYC 2 cut(s) 1701, 2952
BsaI GGTCTC 2 cut(s) 194, 2698
BsaJI CCNNGG 6 cut(s) 1208, 1265, 1292, 2056, 2255, 2434
BsaWI WCCGGW 1 cut(s) 2577
BsaXI ACNNNNNCTCC 4 cut(s) 68, 98, 1866, 1896
Bsc4I CCNNNNNNNGG 4 cut(s) 1277, 1908, 2000, 2284
Bse118I RCCGGY 1 cut(s) 2174
Bse1I ACTGG 5 cut(s) 613, 1154, 1202, 1702, 2980
BseAI TCCGGA 1 cut(s) 2577
BseBI CCWGG 4 cut(s) 525, 657, 1688, 2256
BseCI ATCGAT 2 cut(s) 2153, 3337
BseDI CCNNGG 6 cut(s) 1208, 1265, 1292, 2056, 2255, 2434
BseGI GGATG 5 cut(s) 1770, 1786, 2265, 3124, 3818
BseLI CCNNNNNNNGG 4 cut(s) 1277, 1908, 2000, 2284
BseMII CTCAG 1 cut(s) 3849
BseNI ACTGG 5 cut(s) 613, 1154, 1202, 1702, 2980
BseRI GAGGAG 1 cut(s) 3120
BseSI GKGCMC 1 cut(s) 3103
BseXI GCAGC 2 cut(s) 1557, 3082
BsgI GTGCAG 1 cut(s) 114
Bsh1236I CGCG 1 cut(s) 2050
Bsh1285I CGRYCG 2 cut(s) 2001, 3791
BshFI GGCC 7 cut(s) 67, 1264, 1270, 2037, 2423, 2433, 2971
BshNI GGYRCC 3 cut(s) 1200, 1700, 2181
BshVI ATCGAT 2 cut(s) 2153, 3337
BsiEI CGRYCG 2 cut(s) 2001, 3791
BsiHKAI GWGCWC 4 cut(s) 1313, 2342, 2451, 3103
BsiHKCI CYCGRG 1 cut(s) 3324
BsiSI CCGG 5 cut(s) 1292, 2086, 2175, 2424, 2578
BslFI GGGAC 2 cut(s) 1487, 3341
BslI CCNNNNNNNGG 4 cut(s) 1277, 1908, 2000, 2284
BsmAI GTCTC 6 cut(s) 194, 197, 1544, 1587, 2698, 3152
BsmBI CGTCTC 1 cut(s) 1587
BsmFI GGGAC 2 cut(s) 1487, 3341
BsnI GGCC 7 cut(s) 67, 1264, 1270, 2037, 2423, 2433, 2971
Bso31I GGTCTC 2 cut(s) 194, 2698
BsoBI CYCGRG 1 cut(s) 3324
Bsp1286I GDGCHC 5 cut(s) 1313, 2342, 2451, 3015, 3103
Bsp13I TCCGGA 1 cut(s) 2577
Bsp1407I TGTACA 1 cut(s) 386
Bsp19I CCATGG 1 cut(s) 1265
BspACI CCGC 8 cut(s) 1234, 1885, 1909, 2034, 2053, 2065, 2073, 2178
BspANI GGCC 7 cut(s) 67, 1264, 1270, 2037, 2423, 2433, 2971
BspCNI CTCAG 1 cut(s) 3850
BspDI ATCGAT 2 cut(s) 2153, 3337
BspEI TCCGGA 1 cut(s) 2577
BspFNI CGCG 1 cut(s) 2050
BspHI TCATGA 2 cut(s) 3015, 3499
BspLI GGNNCC 6 cut(s) 568, 1122, 1170, 1202, 1702, 2183
BspMI ACCTGC 1 cut(s) 549
BspOI GCTAGC 4 cut(s) 866, 941, 974, 989
BspPI GGATC 5 cut(s) 1671, 1865, 1947, 1985, 2011
BspT107I GGYRCC 3 cut(s) 1200, 1700, 2181
BspTI CTTAAG 1 cut(s) 3548
BspTNI GGTCTC 2 cut(s) 194, 2698
BsrFI RCCGGY 1 cut(s) 2174
BsrGI TGTACA 1 cut(s) 386
BsrI ACTGG 5 cut(s) 613, 1154, 1202, 1702, 2980
BssAI RCCGGY 1 cut(s) 2174
BssECI CCNNGG 6 cut(s) 1208, 1265, 1292, 2056, 2255, 2434
BssNAI GTATAC 1 cut(s) 784
BssNI GRCGYC 2 cut(s) 1701, 2952
BssSI CACGAG 2 cut(s) 466, 1272
BssT1I CCWWGG 3 cut(s) 1208, 1265, 2434
Bst1107I GTATAC 1 cut(s) 784
Bst2BI CACGAG 2 cut(s) 466, 1272
Bst2UI CCWGG 4 cut(s) 525, 657, 1688, 2256
Bst4CI ACNGT 5 cut(s) 1999, 2218, 2344, 2962, 3634
Bst6I CTCTTC 4 cut(s) 1590, 2511, 3501, 3583
BstACI GRCGYC 2 cut(s) 1701, 2952
BstAFI CTTAAG 1 cut(s) 3548
BstAUI TGTACA 1 cut(s) 386
BstBAI YACGTR 6 cut(s) 550, 580, 738, 1252, 1762, 1962
BstC8I GCNNGC 7 cut(s) 329, 864, 939, 972, 987, 2176, 2451
BstDEI CTNAG 8 cut(s) 89, 1435, 2981, 3112, 3187, 3344, 3471, 3858
BstDSI CCRYGG 2 cut(s) 1265, 2056
BstF5I GGATG 5 cut(s) 1770, 1786, 2265, 3124, 3818
BstFNI CGCG 1 cut(s) 2050
BstH2I RGCGCY 1 cut(s) 1704
BstHHI GCGC 2 cut(s) 1703, 2052
BstMAI GTCTC 6 cut(s) 194, 197, 1544, 1587, 2698, 3152
BstMCI CGRYCG 2 cut(s) 2001, 3791
BstMWI GCNNNNNNNGC 4 cut(s) 514, 1231, 1401, 2977
BstNI CCWGG 4 cut(s) 525, 657, 1688, 2256
BstNSI RCATGY 9 cut(s) 831, 937, 970, 985, 1024, 1047, 1057, 1607, 1614
BstSCI CCNGG 5 cut(s) 523, 655, 1291, 1686, 2254
BstSFI CTRYAG 2 cut(s) 2214, 3884
BstSLI GKGCMC 1 cut(s) 3103
BstSNI TACGTA 3 cut(s) 550, 738, 1962
BstUI CGCG 1 cut(s) 2050
BstV1I GCAGC 2 cut(s) 1557, 3082
BstV2I GAAGAC 2 cut(s) 2202, 3482
BstX2I RGATCY 5 cut(s) 1676, 1833, 1870, 1952, 2134
BstXI CCANNNNNNTGG 1 cut(s) 1687
BstYI RGATCY 5 cut(s) 1676, 1833, 1870, 1952, 2134
BstZ17I GTATAC 1 cut(s) 784
Bsu15I ATCGAT 2 cut(s) 2153, 3337
BsuI GTATCC 1 cut(s) 1984
BsuRI GGCC 7 cut(s) 67, 1264, 1270, 2037, 2423, 2433, 2971
BsuTUI ATCGAT 2 cut(s) 2153, 3337
BtgI CCRYGG 2 cut(s) 1265, 2056
BtgZI GCGATG 1 cut(s) 2281
BtsCI GGATG 5 cut(s) 1770, 1786, 2265, 3124, 3818
BtsI GCAGTG 1 cut(s) 2460
BtsIMutI CAGTG 5 cut(s) 1695, 2223, 2340, 2460, 3639
BveI ACCTGC 1 cut(s) 549
Cac8I GCNNGC 7 cut(s) 329, 864, 939, 972, 987, 2176, 2451
CciI TCATGA 2 cut(s) 3015, 3499
CfoI GCGC 2 cut(s) 1703, 2052
Cfr10I RCCGGY 1 cut(s) 2174
Cfr13I GGNCC 4 cut(s) 566, 2036, 2221, 2969
ClaI ATCGAT 2 cut(s) 2153, 3337
CspCI CAANNNNNGTGG 2 cut(s) 2400, 2435
DdeI CTNAG 8 cut(s) 89, 1435, 2981, 3112, 3187, 3344, 3471, 3858
DinI GGCGCC 1 cut(s) 1702
DraI TTTAAA 2 cut(s) 2638, 3240
DrdI GACNNNNNNGTC 1 cut(s) 1802
DseDI GACNNNNNNGTC 1 cut(s) 1802
EaeI YGGCCR 2 cut(s) 1268, 2421
Eam1104I CTCTTC 4 cut(s) 1590, 2511, 3501, 3583
EarI CTCTTC 4 cut(s) 1590, 2511, 3501, 3583
EciI GGCGGA 1 cut(s) 1874
Ecl136II GAGCTC 2 cut(s) 1311, 2449
Eco105I TACGTA 3 cut(s) 550, 738, 1962
Eco130I CCWWGG 3 cut(s) 1208, 1265, 2434
Eco147I AGGCCT 1 cut(s) 67
Eco24I GRGCYC 3 cut(s) 1313, 2451, 3015
Eco31I GGTCTC 2 cut(s) 194, 2698
Eco32I GATATC 2 cut(s) 3726, 3744
Eco47I GGWCC 2 cut(s) 566, 2221
Eco53kI GAGCTC 2 cut(s) 1311, 2449
Eco72I CACGTG 2 cut(s) 580, 1252
Eco88I CYCGRG 1 cut(s) 3324
EcoICRI GAGCTC 2 cut(s) 1311, 2449
EcoRII CCWGG 4 cut(s) 523, 655, 1686, 2254
EcoRV GATATC 2 cut(s) 3726, 3744
EcoT14I CCWWGG 3 cut(s) 1208, 1265, 2434
EcoT22I ATGCAT 2 cut(s) 1406, 1616
EcoT38I GRGCYC 3 cut(s) 1313, 2451, 3015
EgeI GGCGCC 1 cut(s) 1702
EheI GGCGCC 1 cut(s) 1702
ErhI CCWWGG 3 cut(s) 1208, 1265, 2434
Esp3I CGTCTC 1 cut(s) 1587
FaqI GGGAC 2 cut(s) 1487, 3341
FauI CCCGC 2 cut(s) 1227, 2171
FauNDI CATATG 1 cut(s) 1659
FbaI TGATCA 1 cut(s) 3217
FblI GTMKAC 4 cut(s) 783, 1806, 2356, 2467
Fnu4HI GCNGC 5 cut(s) 1571, 2035, 2053, 2073, 3071
FokI GGATG 5 cut(s) 1757, 1793, 2272, 3111, 3825
FriOI GRGCYC 3 cut(s) 1313, 2451, 3015
Fsp4HI GCNGC 5 cut(s) 1571, 2035, 2053, 2073, 3071
GlaI GCGC 2 cut(s) 1702, 2051
GluI GCNGC 5 cut(s) 1571, 2035, 2053, 2073, 3071
GsuI CTGGAG 3 cut(s) 678, 1709, 2356
HaeII RGCGCY 1 cut(s) 1704
HaeIII GGCC 7 cut(s) 67, 1264, 1270, 2037, 2423, 2433, 2971
HapII CCGG 5 cut(s) 1292, 2086, 2175, 2424, 2578
HhaI GCGC 2 cut(s) 1703, 2052
Hin1I GRCGYC 2 cut(s) 1701, 2952
Hin6I GCGC 2 cut(s) 1701, 2050
HinP1I GCGC 2 cut(s) 1701, 2050
HincII GTYRAC 7 cut(s) 473, 1459, 1914, 2357, 2468, 2871, 3544
HindII GTYRAC 7 cut(s) 473, 1459, 1914, 2357, 2468, 2871, 3544
HindIII AAGCTT 2 cut(s) 2189, 3031
HpaI GTTAAC 2 cut(s) 1459, 1914
HpaII CCGG 5 cut(s) 1292, 2086, 2175, 2424, 2578
HphI GGTGA 8 cut(s) 676, 807, 835, 1147, 1232, 1252, 1997, 2528
Hpy188I TCNGA 7 cut(s) 1120, 1168, 1846, 2003, 2754, 3655, 3796
Hpy188III TCNNGA 8 cut(s) 295, 302, 460, 2382, 2578, 3016, 3326, 3500
Hpy99I CGWCG 5 cut(s) 633, 1799, 2011, 2358, 2472
HpyAV CCTTC 6 cut(s) 265, 1249, 1662, 2468, 2683, 2840
HpyCH4III ACNGT 5 cut(s) 1999, 2218, 2344, 2962, 3634
HpyF10VI GCNNNNNNNGC 4 cut(s) 514, 1231, 1401, 2977
HpyF3I CTNAG 8 cut(s) 89, 1435, 2981, 3112, 3187, 3344, 3471, 3858
Hsp92I GRCGYC 2 cut(s) 1701, 2952
HspAI GCGC 2 cut(s) 1701, 2050
KasI GGCGCC 1 cut(s) 1700
Kpn2I TCCGGA 1 cut(s) 2577
KroI GCCGGC 1 cut(s) 2174
KroNI GCCGGC 1 cut(s) 2176
Ksp22I TGATCA 1 cut(s) 3217
KspAI GTTAAC 2 cut(s) 1459, 1914
LmnI GCTCC 3 cut(s) 2257, 2337, 2446
Lsp1109I GCAGC 2 cut(s) 1557, 3082
LweI GCATC 4 cut(s) 806, 1582, 2297, 2771
MfeI CAATTG 3 cut(s) 599, 1889, 2991
MflI RGATCY 5 cut(s) 1676, 1833, 1870, 1952, 2134
MhlI GDGCHC 5 cut(s) 1313, 2342, 2451, 3015, 3103
MlsI TGGCCA 1 cut(s) 1270
MluNI TGGCCA 1 cut(s) 1270
Mly113I GGCGCC 1 cut(s) 1701
MlyI GAGTC 9 cut(s) 181, 1124, 1172, 1700, 2074, 3130, 3323, 3472, 3487
MmeI TCCRAC 7 cut(s) 1098, 1146, 1981, 2018, 2119, 2248, 3377
Mox20I TGGCCA 1 cut(s) 1270
Mph1103I ATGCAT 2 cut(s) 1406, 1616
MroI TCCGGA 1 cut(s) 2577
MroNI GCCGGC 1 cut(s) 2174
MscI TGGCCA 1 cut(s) 1270
MslI CAYNNNNRTG 4 cut(s) 419, 955, 1009, 1294
Msp20I TGGCCA 1 cut(s) 1270
MspCI CTTAAG 1 cut(s) 3548
MspI CCGG 5 cut(s) 1292, 2086, 2175, 2424, 2578
MspR9I CCNGG 5 cut(s) 525, 657, 1293, 1688, 2256
MunI CAATTG 3 cut(s) 599, 1889, 2991
MvaI CCWGG 4 cut(s) 525, 657, 1688, 2256
MvnI CGCG 1 cut(s) 2050
MwoI GCNNNNNNNGC 4 cut(s) 514, 1231, 1401, 2977
NaeI GCCGGC 1 cut(s) 2176
NarI GGCGCC 1 cut(s) 1701
NciI CCSGG 1 cut(s) 1293
NcoI CCATGG 1 cut(s) 1265
NdeI CATATG 1 cut(s) 1659
NgoMIV GCCGGC 1 cut(s) 2174
NheI GCTAGC 4 cut(s) 862, 937, 970, 985
NlaIV GGNNCC 6 cut(s) 568, 1122, 1170, 1202, 1702, 2183
NsiI ATGCAT 2 cut(s) 1406, 1616
NspI RCATGY 9 cut(s) 831, 937, 970, 985, 1024, 1047, 1057, 1607, 1614
OliI CACNNNNGTG 2 cut(s) 419, 1294
PagI TCATGA 2 cut(s) 3015, 3499
PceI AGGCCT 1 cut(s) 67
PciI ACATGT 1 cut(s) 827
PcsI WCGNNNNNNNCGW 2 cut(s) 2003, 3315
PdiI GCCGGC 1 cut(s) 2176
PflMI CCANNNNNTGG 1 cut(s) 2284
PkrI GCNGC 5 cut(s) 1572, 2036, 2054, 2074, 3072
Ple19I CGATCG 1 cut(s) 3791
PleI GAGTC 9 cut(s) 180, 1123, 1171, 1699, 2074, 3129, 3323, 3472, 3487
PluTI GGCGCC 1 cut(s) 1704
PmaCI CACGTG 2 cut(s) 580, 1252
PmlI CACGTG 2 cut(s) 580, 1252
PpsI GAGTC 9 cut(s) 180, 1123, 1171, 1699, 2074, 3129, 3323, 3472, 3487
Ppu21I YACGTR 6 cut(s) 550, 580, 738, 1252, 1762, 1962
PscI ACATGT 1 cut(s) 827
PshBI ATTAAT 2 cut(s) 501, 2643
PsiI TTATAA 4 cut(s) 1935, 1968, 2573, 3596
Psp124BI GAGCTC 2 cut(s) 1313, 2451
Psp1406I AACGTT 2 cut(s) 140, 1632
Psp6I CCWGG 4 cut(s) 523, 655, 1686, 2254
PspCI CACGTG 2 cut(s) 580, 1252
PspGI CCWGG 4 cut(s) 523, 655, 1686, 2254
PspN4I GGNNCC 6 cut(s) 568, 1122, 1170, 1202, 1702, 2183
PspPI GGNCC 4 cut(s) 566, 2036, 2221, 2969
PsuI RGATCY 5 cut(s) 1676, 1833, 1870, 1952, 2134
PvuI CGATCG 1 cut(s) 3791
RseI CAYNNNNRTG 4 cut(s) 419, 955, 1009, 1294
SacI GAGCTC 2 cut(s) 1313, 2451
SalI GTCGAC 2 cut(s) 2355, 2466
SatI GCNGC 5 cut(s) 1571, 2035, 2053, 2073, 3071
Sau96I GGNCC 4 cut(s) 566, 2036, 2221, 2969
SchI GAGTC 9 cut(s) 181, 1124, 1172, 1700, 2074, 3130, 3323, 3472, 3487
ScrFI CCNGG 5 cut(s) 525, 657, 1293, 1688, 2256
SduI GDGCHC 5 cut(s) 1313, 2342, 2451, 3015, 3103
SfaNI GCATC 4 cut(s) 806, 1582, 2297, 2771
SfcI CTRYAG 2 cut(s) 2214, 3884
SfoI GGCGCC 1 cut(s) 1702
SinI GGWCC 2 cut(s) 566, 2221
SmiMI CAYNNNNRTG 4 cut(s) 419, 955, 1009, 1294
SmlI CTYRAG 3 cut(s) 1775, 3074, 3548
SmoI CTYRAG 3 cut(s) 1775, 3074, 3548
SnaBI TACGTA 3 cut(s) 550, 738, 1962
SpeI ACTAGT 2 cut(s) 3095, 3356
SseBI AGGCCT 1 cut(s) 67
SsiI CCGC 8 cut(s) 1234, 1885, 1909, 2034, 2053, 2065, 2073, 2178
SspDI GGCGCC 1 cut(s) 1700
SspI AATATT 1 cut(s) 3225
SstI GAGCTC 2 cut(s) 1313, 2451
StuI AGGCCT 1 cut(s) 67
StyD4I CCNGG 5 cut(s) 523, 655, 1291, 1686, 2254
StyI CCWWGG 3 cut(s) 1208, 1265, 2434
TaaI ACNGT 5 cut(s) 1999, 2218, 2344, 2962, 3634
TatI WGTACW 1 cut(s) 386
TauI GCSGC 3 cut(s) 2037, 2055, 2075
TscAI CASTG 5 cut(s) 1702, 2223, 2347, 2460, 3639
TseI GCWGC 2 cut(s) 1570, 3070
TspGWI ACGGA 5 cut(s) 351, 448, 452, 2160, 2546
TspRI CASTG 5 cut(s) 1702, 2223, 2347, 2460, 3639
Van91I CCANNNNNTGG 1 cut(s) 2284
Vha464I CTTAAG 1 cut(s) 3548
VneI GTGCAC 1 cut(s) 3099
VpaK11BI GGWCC 2 cut(s) 566, 2221
VspI ATTAAT 2 cut(s) 501, 2643
XapI RAATTY 7 cut(s) 29, 455, 2109, 2118, 2545, 2657, 3089
XceI RCATGY 9 cut(s) 831, 937, 970, 985, 1024, 1047, 1057, 1607, 1614
XmiI GTMKAC 4 cut(s) 783, 1806, 2356, 2467
ZraI GACGTC 1 cut(s) 2953
Zsp2I ATGCAT 2 cut(s) 1406, 1616
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.