pycom01g20020

alpha-L-fucosidase 1-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Reverse (-)
18493006 .. 18495153
2148 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g20020.2

Sequence Viewer

Length: 1476 bp
ATGGCTAAAATATGGTGCTCTTTGTGGATAATCACATGCCTTCAACTGTGCACTATCACCTTCTCCAAGCTTGAGCAAGTCCCAACACCTCCACTGCCAATCCTGCCCCTTCCCACATACTCCCAGCTCAAATGGCAGCAAAGGGAGATCATCATGTTCCTCCACTTCGGAGTGAACACATTCACCAACTCCGAATGGGGAACGGGGCACGAAAGCCCCGGAATATTCAACCCAGTCGGTCTTGACGCCAACCAATGGGCCAGAACAGCGTCGGACTCTGGCATATCACTGATGATACTGACTGCCAAACATCACGATGGGTTTTGCTTATGGCCTTCGAAGTACACGGATCACTCCGTGGCAAATAGTCCTTGGCGAAATGGTCACGGGGATGTTGTGCATGAACTGGTTGATGCAGCAAATCCCCGTGGGATTGATGTAGGGCTCTATCTCTCACCGTGGGATAGACATGATCGGAGATACGGGCATGAGATTGCCTACAACCAGTACTACTTAGCTCAACTGCAAGAGCTCCTAAGCAGGTATGGGGGTGTGAAAGAGATTTGGTTTGATGGGAATAAGGGGAAGAATGCCCCAAACATGTCCTATTATTTCACAGATTGGTTCTCCATGGTGAAGGAGTTGCAGAGCTCCATTAACATATTTTCGGATGCTGGTCCGGATGTTAGATGGGTTGGAAATGAGCAAGGGTTTGCCGGGAGTACGTGTTGGTCCACCATTAATCGGACCTCGCTATCAATTGGCAATGCAAGCATTGAAGATTACCTCAACAAGGGCGATCCAAAAGGGACGGATTGGTTGCCGGCAGAGTGCGACGTTTCGATCCGAGATGGATGGTTTTGGCATAAATCAGAGTCACCCAAGAGGCTAAGCAAGCTACTTGAAATTTACTACAACTCGGTGGGGAGAAATTGTGTGCTACTACTCAATGTGCCTCCTAATCCGACTGGTCTCATAGCCAACGAAGATGTTAAAAGACTAAGAGAATTCAGAAGTGCAATCGACACAATATTTTCTACCAATTTAGCCGAGAAATGTCCTATTAAAGTTAGTAGCCAAAGAGGAGGCAAAGGAGGAGGTTTTGGACCTGAAAATATGCTAGACAATGACCATTTGTGGACATATTGGGCTCCAAGGGATGATGGAAGGGAGAACCATTGGATTGAATTTAGAAGCACAGGATCAGATGAAGGGCTGAGATTCAATGTGATTCGGATCCAGGAGGCGATCGGGCTTGGTCAGAGGATCAAACGGCACGATATTTACGTGGACGGTAAAAGAGTGGCAAATGGAACCACAGTAGGGCACAAGAGGCTTCACAGACTTGGAGGGGGAGTTGTACATGGCAAAATTGTAAGAATAAAAATTGGAGATTCAAGAGGGCTGCCCTTAATTTCTTCCATTGGCCTGCATATTGATCCCTTTTGGCACCCAATTGGGCAGCCATCGCAATAA

Protein Analysis

492

Amino Acids

55.43

Weight (kDa)

7.68

Isoelectric Point (pI)

45.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 531
AccB1I GGYRCC 1 cut(s) 1449
AccB7I CCANNNNNTGG 1 cut(s) 255
AccIII TCCGGA 1 cut(s) 679
AclWI GGATC 8 cut(s) 357, 794, 838, 1210, 1231, 1244, 1274, 1433
AcsI RAATTY 3 cut(s) 906, 1007, 1187
AcyI GRCGYC 1 cut(s) 246
AdeI CACNNNGTG 1 cut(s) 358
AfaI GTAC 4 cut(s) 344, 509, 724, 1362
AfiI CCNNNNNNNGG 4 cut(s) 255, 744, 793, 1323
AflIII ACRYGT 2 cut(s) 600, 725
AgsI TTSAA 7 cut(s) 44, 229, 779, 905, 1187, 1225, 1398
AjnI CCWGG 1 cut(s) 1239
AluBI AGCT 6 cut(s) 70, 127, 518, 532, 651, 898
AluI AGCT 6 cut(s) 70, 127, 518, 532, 651, 898
Alw21I GWGCWC 4 cut(s) 20, 53, 534, 653
Alw26I GTCTC 1 cut(s) 977
Alw44I GTGCAC 1 cut(s) 49
AlwI GGATC 8 cut(s) 357, 794, 838, 1210, 1231, 1244, 1274, 1433
Aor13HI TCCGGA 1 cut(s) 679
AoxI GGCC 3 cut(s) 258, 332, 1426
ApaLI GTGCAC 1 cut(s) 49
ApeKI GCWGC 4 cut(s) 136, 416, 1405, 1462
ApoI RAATTY 3 cut(s) 906, 1007, 1187
AseI ATTAAT 1 cut(s) 741
Asp700I GAANNNNTTC 1 cut(s) 179
AspS9I GGNCC 5 cut(s) 258, 677, 732, 747, 1106
AsuC2I CCSGG 2 cut(s) 219, 718
AsuHPI GGTGA 5 cut(s) 49, 175, 447, 646, 870
AsuII TTCGAA 1 cut(s) 338
AvaII GGWCC 4 cut(s) 677, 732, 747, 1106
BaeGI GKGCMC 3 cut(s) 53, 210, 1329
BamHI GGATCC 1 cut(s) 1236
BanI GGYRCC 1 cut(s) 1449
BanII GRGCYC 4 cut(s) 447, 534, 653, 1153
Bbv12I GWGCWC 4 cut(s) 20, 53, 534, 653
BbvI GCAGC 3 cut(s) 148, 428, 1392
BccI CCATC 7 cut(s) 311, 566, 684, 845, 849, 1157, 1474
BceAI ACGGC 1 cut(s) 1289
BciT130I CCWGG 1 cut(s) 1241
BcnI CCSGG 2 cut(s) 219, 718
BcoDI GTCTC 1 cut(s) 977
BfaI CTAG 1 cut(s) 1121
BfuAI ACCTGC 1 cut(s) 531
BisI GCNGC 4 cut(s) 137, 417, 1406, 1463
BlpI GCTNAGC 1 cut(s) 890
BlsI GCNGC 4 cut(s) 138, 418, 1407, 1464
BmcAI AGTACT 1 cut(s) 509
Bme1390I CCNGG 3 cut(s) 219, 718, 1241
Bme18I GGWCC 4 cut(s) 677, 732, 747, 1106
BmgT120I GGNCC 5 cut(s) 258, 677, 732, 747, 1106
BmiI GGNNCC 4 cut(s) 1152, 1238, 1315, 1451
BmrFI CCNGG 3 cut(s) 219, 718, 1241
BmrI ACTGGG 1 cut(s) 227
BmsI GCATC 2 cut(s) 403, 661
BmuI ACTGGG 1 cut(s) 227
Bpu10I CCTNAGC 1 cut(s) 536
Bpu1102I GCTNAGC 1 cut(s) 890
Bpu14I TTCGAA 1 cut(s) 338
BpuEI CTTGAG 1 cut(s) 92
BpuMI CCSGG 2 cut(s) 219, 718
BsaAI YACGTR 2 cut(s) 726, 1288
BsaBI GATNNNNATC 1 cut(s) 1235
BsaHI GRCGYC 1 cut(s) 246
BsaI GGTCTC 1 cut(s) 977
BsaJI CCNNGG 7 cut(s) 217, 357, 371, 427, 458, 630, 1154
BsaWI WCCGGW 1 cut(s) 679
BsaXI ACNNNNNCTCC 6 cut(s) 712, 742, 919, 949, 1341, 1371
Bsc4I CCNNNNNNNGG 4 cut(s) 255, 744, 793, 1323
Bse118I RCCGGY 1 cut(s) 823
Bse1I ACTGG 4 cut(s) 233, 411, 505, 973
Bse3DI GCAATG 1 cut(s) 772
Bse8I GATNNNNATC 1 cut(s) 1235
BseAI TCCGGA 1 cut(s) 679
BseBI CCWGG 1 cut(s) 1241
BseDI CCNNGG 7 cut(s) 217, 357, 371, 427, 458, 630, 1154
BseGI GGATG 5 cut(s) 397, 676, 688, 860, 1165
BseJI GATNNNNATC 1 cut(s) 1235
BseLI CCNNNNNNNGG 4 cut(s) 255, 744, 793, 1323
BseMI GCAATG 1 cut(s) 772
BseMII CTCAG 1 cut(s) 1208
BseNI ACTGG 4 cut(s) 233, 411, 505, 973
BseRI GAGGAG 2 cut(s) 1098, 1110
BseSI GKGCMC 3 cut(s) 53, 210, 1329
BseXI GCAGC 3 cut(s) 148, 428, 1392
BseYI CCCAGC 1 cut(s) 123
Bsh1285I CGRYCG 1 cut(s) 1251
BshFI GGCC 3 cut(s) 260, 334, 1428
BshNI GGYRCC 1 cut(s) 1449
BsiEI CGRYCG 1 cut(s) 1251
BsiHKAI GWGCWC 4 cut(s) 20, 53, 534, 653
BsiSI CCGG 4 cut(s) 219, 680, 717, 824
BslFI GGGAC 2 cut(s) 65, 823
BslI CCNNNNNNNGG 4 cut(s) 255, 744, 793, 1323
BsmAI GTCTC 1 cut(s) 977
BsmFI GGGAC 2 cut(s) 65, 823
BsmI GAATGC 1 cut(s) 595
BsnI GGCC 3 cut(s) 260, 334, 1428
Bso31I GGTCTC 1 cut(s) 977
Bsp119I TTCGAA 1 cut(s) 338
Bsp1286I GDGCHC 8 cut(s) 20, 53, 210, 447, 534, 653, 1153, 1329
Bsp13I TCCGGA 1 cut(s) 679
Bsp1407I TGTACA 1 cut(s) 1360
Bsp1720I GCTNAGC 1 cut(s) 890
Bsp19I CCATGG 1 cut(s) 630
BspANI GGCC 3 cut(s) 260, 334, 1428
BspCNI CTCAG 1 cut(s) 1209
BspEI TCCGGA 1 cut(s) 679
BspLI GGNNCC 4 cut(s) 1152, 1238, 1315, 1451
BspMI ACCTGC 1 cut(s) 531
BspPI GGATC 8 cut(s) 357, 794, 838, 1210, 1231, 1244, 1274, 1433
BspT104I TTCGAA 1 cut(s) 338
BspT107I GGYRCC 1 cut(s) 1449
BspTNI GGTCTC 1 cut(s) 977
BsrDI GCAATG 1 cut(s) 772
BsrFI RCCGGY 1 cut(s) 823
BsrGI TGTACA 1 cut(s) 1360
BsrI ACTGG 4 cut(s) 233, 411, 505, 973
BssAI RCCGGY 1 cut(s) 823
BssECI CCNNGG 7 cut(s) 217, 357, 371, 427, 458, 630, 1154
BssNI GRCGYC 1 cut(s) 246
BssT1I CCWWGG 3 cut(s) 371, 630, 1154
Bst2UI CCWGG 1 cut(s) 1241
Bst4CI ACNGT 4 cut(s) 48, 459, 1295, 1321
BstACI GRCGYC 1 cut(s) 246
BstAUI TGTACA 1 cut(s) 1360
BstBAI YACGTR 2 cut(s) 726, 1288
BstBI TTCGAA 1 cut(s) 338
BstC8I GCNNGC 4 cut(s) 772, 825, 896, 1430
BstDEI CTNAG 5 cut(s) 514, 536, 890, 1001, 1217
BstDSI CCRYGG 4 cut(s) 357, 427, 458, 630
BstENI CCTNNNNNAGG 1 cut(s) 791
BstF5I GGATG 5 cut(s) 397, 676, 688, 860, 1165
BstMAI GTCTC 1 cut(s) 977
BstMCI CGRYCG 1 cut(s) 1251
BstMWI GCNNNNNNNGC 7 cut(s) 103, 133, 266, 771, 895, 1333, 1468
BstNI CCWGG 1 cut(s) 1241
BstNSI RCATGY 2 cut(s) 39, 604
BstSCI CCNGG 3 cut(s) 217, 716, 1239
BstSLI GKGCMC 3 cut(s) 53, 210, 1329
BstV1I GCAGC 3 cut(s) 148, 428, 1392
BstX2I RGATCY 1 cut(s) 1236
BstYI RGATCY 1 cut(s) 1236
BsuRI GGCC 3 cut(s) 260, 334, 1428
BtgI CCRYGG 4 cut(s) 357, 427, 458, 630
BtgZI GCGATG 1 cut(s) 1452
BtsCI GGATG 5 cut(s) 397, 676, 688, 860, 1165
BtsI GCAGTG 1 cut(s) 92
BtsIMutI CAGTG 2 cut(s) 92, 287
BveI ACCTGC 1 cut(s) 531
Cac8I GCNNGC 4 cut(s) 772, 825, 896, 1430
Cfr10I RCCGGY 1 cut(s) 823
Cfr13I GGNCC 5 cut(s) 258, 677, 732, 747, 1106
CseI GACGC 2 cut(s) 254, 258
Csp6I GTAC 4 cut(s) 343, 508, 723, 1361
CviAII CATG 8 cut(s) 36, 154, 401, 470, 488, 601, 631, 1364
CviQI GTAC 4 cut(s) 343, 508, 723, 1361
DdeI CTNAG 5 cut(s) 514, 536, 890, 1001, 1217
DraIII CACNNNGTG 1 cut(s) 358
Ecl136II GAGCTC 2 cut(s) 532, 651
Eco130I CCWWGG 3 cut(s) 371, 630, 1154
Eco24I GRGCYC 4 cut(s) 447, 534, 653, 1153
Eco31I GGTCTC 1 cut(s) 977
Eco47I GGWCC 4 cut(s) 677, 732, 747, 1106
Eco53kI GAGCTC 2 cut(s) 532, 651
EcoICRI GAGCTC 2 cut(s) 532, 651
EcoNI CCTNNNNNAGG 1 cut(s) 791
EcoRI GAATTC 1 cut(s) 1007
EcoRII CCWGG 1 cut(s) 1239
EcoT14I CCWWGG 3 cut(s) 371, 630, 1154
EcoT38I GRGCYC 4 cut(s) 447, 534, 653, 1153
ErhI CCWWGG 3 cut(s) 371, 630, 1154
FaeI CATG 8 cut(s) 39, 157, 404, 473, 491, 604, 634, 1367
FaqI GGGAC 2 cut(s) 65, 823
FatI CATG 8 cut(s) 35, 153, 400, 469, 487, 600, 630, 1363
Fnu4HI GCNGC 4 cut(s) 137, 417, 1406, 1463
FokI GGATG 5 cut(s) 404, 683, 695, 867, 1172
FriOI GRGCYC 4 cut(s) 447, 534, 653, 1153
Fsp4HI GCNGC 4 cut(s) 137, 417, 1406, 1463
FspBI CTAG 1 cut(s) 1121
GluI GCNGC 4 cut(s) 137, 417, 1406, 1463
GsaI CCCAGC 1 cut(s) 127
HaeIII GGCC 3 cut(s) 260, 334, 1428
HapII CCGG 4 cut(s) 219, 680, 717, 824
HgaI GACGC 2 cut(s) 254, 258
Hin1I GRCGYC 1 cut(s) 246
Hin1II CATG 8 cut(s) 39, 157, 404, 473, 491, 604, 634, 1367
HindIII AAGCTT 1 cut(s) 68
HinfI GANTC 5 cut(s) 275, 875, 1221, 1231, 1394
HpaII CCGG 4 cut(s) 219, 680, 717, 824
HphI GGTGA 5 cut(s) 49, 175, 447, 646, 870
Hpy166II GTNNAC 6 cut(s) 51, 175, 345, 735, 1140, 1291
Hpy188III TCNNGA 4 cut(s) 242, 314, 680, 1398
Hpy8I GTNNAC 6 cut(s) 51, 175, 345, 735, 1140, 1291
Hpy99I CGWCG 2 cut(s) 274, 839
HpyAV CCTTC 7 cut(s) 50, 70, 119, 345, 631, 1161, 1205
HpyCH4III ACNGT 4 cut(s) 48, 459, 1295, 1321
HpyCH4IV ACGT 3 cut(s) 725, 837, 1287
HpyCH4V TGCA 8 cut(s) 51, 400, 416, 526, 646, 770, 1019, 1432
HpyF10VI GCNNNNNNNGC 7 cut(s) 103, 133, 266, 771, 895, 1333, 1468
HpyF3I CTNAG 5 cut(s) 514, 536, 890, 1001, 1217
HpySE526I ACGT 3 cut(s) 725, 837, 1287
Hsp92I GRCGYC 1 cut(s) 246
Hsp92II CATG 8 cut(s) 39, 157, 404, 473, 491, 604, 634, 1367
Kpn2I TCCGGA 1 cut(s) 679
KroI GCCGGC 1 cut(s) 823
KroNI GCCGGC 1 cut(s) 825
LmnI GCTCC 3 cut(s) 537, 656, 1156
Lsp1109I GCAGC 3 cut(s) 148, 428, 1392
LweI GCATC 2 cut(s) 403, 661
MaeI CTAG 1 cut(s) 1121
MaeII ACGT 3 cut(s) 725, 837, 1287
MaeIII GTNAC 2 cut(s) 383, 876
MboII GAAGA 4 cut(s) 598, 791, 998, 1410
MfeI CAATTG 2 cut(s) 759, 1455
MflI RGATCY 1 cut(s) 1236
MhlI GDGCHC 8 cut(s) 20, 53, 210, 447, 534, 653, 1153, 1329
MlyI GAGTC 2 cut(s) 269, 884
MmeI TCCRAC 3 cut(s) 252, 676, 989
MroI TCCGGA 1 cut(s) 679
MroNI GCCGGC 1 cut(s) 823
MroXI GAANNNNTTC 1 cut(s) 179
MseI TTAA 5 cut(s) 657, 741, 993, 1065, 1412
MslI CAYNNNNRTG 2 cut(s) 315, 390
MspI CCGG 4 cut(s) 219, 680, 717, 824
MspR9I CCNGG 3 cut(s) 219, 718, 1241
MunI CAATTG 2 cut(s) 759, 1455
Mva1269I GAATGC 1 cut(s) 595
MvaI CCWGG 1 cut(s) 1241
MwoI GCNNNNNNNGC 7 cut(s) 103, 133, 266, 771, 895, 1333, 1468
NaeI GCCGGC 1 cut(s) 825
NciI CCSGG 2 cut(s) 219, 718
NcoI CCATGG 1 cut(s) 630
NgoMIV GCCGGC 1 cut(s) 823
NlaIII CATG 8 cut(s) 39, 157, 404, 473, 491, 604, 634, 1367
NlaIV GGNNCC 4 cut(s) 1152, 1238, 1315, 1451
NmeAIII GCCGAG 1 cut(s) 1075
NmuCI GTSAC 2 cut(s) 383, 876
NspI RCATGY 2 cut(s) 39, 604
NspV TTCGAA 1 cut(s) 338
PciI ACATGT 1 cut(s) 600
PcsI WCGNNNNNNNCGW 1 cut(s) 1284
PctI GAATGC 1 cut(s) 595
PdiI GCCGGC 1 cut(s) 825
PdmI GAANNNNTTC 1 cut(s) 179
PfeI GAWTC 3 cut(s) 1221, 1231, 1394
PflMI CCANNNNNTGG 1 cut(s) 255
PfoI TCCNGGA 1 cut(s) 1239
PkrI GCNGC 4 cut(s) 138, 418, 1407, 1464
Ple19I CGATCG 1 cut(s) 1251
PleI GAGTC 2 cut(s) 269, 883
PpsI GAGTC 2 cut(s) 269, 883
Ppu21I YACGTR 2 cut(s) 726, 1288
PscI ACATGT 1 cut(s) 600
PshBI ATTAAT 1 cut(s) 741
Psp124BI GAGCTC 2 cut(s) 534, 653
Psp6I CCWGG 1 cut(s) 1239
PspFI CCCAGC 1 cut(s) 123
PspGI CCWGG 1 cut(s) 1239
PspN4I GGNNCC 4 cut(s) 1152, 1238, 1315, 1451
PspPI GGNCC 5 cut(s) 258, 677, 732, 747, 1106
PsuI RGATCY 1 cut(s) 1236
PvuI CGATCG 1 cut(s) 1251
RsaI GTAC 4 cut(s) 344, 509, 724, 1362
RsaNI GTAC 4 cut(s) 343, 508, 723, 1361
RseI CAYNNNNRTG 2 cut(s) 315, 390
SacI GAGCTC 2 cut(s) 534, 653
SaqAI TTAA 5 cut(s) 657, 741, 993, 1065, 1412
SatI GCNGC 4 cut(s) 137, 417, 1406, 1463
Sau96I GGNCC 5 cut(s) 258, 677, 732, 747, 1106
ScaI AGTACT 1 cut(s) 509
SchI GAGTC 2 cut(s) 269, 884
ScrFI CCNGG 3 cut(s) 219, 718, 1241
SduI GDGCHC 8 cut(s) 20, 53, 210, 447, 534, 653, 1153, 1329
SfaNI GCATC 2 cut(s) 403, 661
SfuI TTCGAA 1 cut(s) 338
SinI GGWCC 4 cut(s) 677, 732, 747, 1106
SmiMI CAYNNNNRTG 2 cut(s) 315, 390
SmlI CTYRAG 1 cut(s) 71
SmoI CTYRAG 1 cut(s) 71
SspI AATATT 2 cut(s) 225, 1032
SspMI CTAG 1 cut(s) 1121
SstI GAGCTC 2 cut(s) 534, 653
StyD4I CCNGG 3 cut(s) 217, 716, 1239
StyI CCWWGG 3 cut(s) 371, 630, 1154
TaaI ACNGT 4 cut(s) 48, 459, 1295, 1321
TaiI ACGT 3 cut(s) 728, 840, 1290
TaqI TCGA 3 cut(s) 338, 842, 1023
TaqII GACCGA 1 cut(s) 227
TatI WGTACW 3 cut(s) 342, 507, 1360
TfiI GAWTC 3 cut(s) 1221, 1231, 1394
Tru1I TTAA 5 cut(s) 657, 741, 993, 1065, 1412
Tru9I TTAA 5 cut(s) 657, 741, 993, 1065, 1412
TscAI CASTG 2 cut(s) 99, 294
TseFI GTSAC 2 cut(s) 383, 876
TseI GCWGC 4 cut(s) 136, 416, 1405, 1462
Tsp45I GTSAC 2 cut(s) 383, 876
TspDTI ATGAA 2 cut(s) 417, 1224
TspGWI ACGGA 3 cut(s) 346, 362, 827
TspRI CASTG 2 cut(s) 99, 294
Van91I CCANNNNNTGG 1 cut(s) 255
VneI GTGCAC 1 cut(s) 49
VpaK11BI GGWCC 4 cut(s) 677, 732, 747, 1106
VspI ATTAAT 1 cut(s) 741
XagI CCTNNNNNAGG 1 cut(s) 791
XapI RAATTY 3 cut(s) 906, 1007, 1187
XceI RCATGY 2 cut(s) 39, 604
XmnI GAANNNNTTC 1 cut(s) 179
XspI CTAG 1 cut(s) 1121
ZrmI AGTACT 1 cut(s) 509
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.