Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0003070

Physical Location & Seq

Genomic Coordinates Reverse (-)

50228253 .. 50230986

Gene Structure 2734 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0391900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2373 bp

ATGACGAAACTACCCTTCTCCGTTCTCATTACCATCCCCACCTTCATCTTCACCATTTTGTTCACCCTCCCATTTTCCCATGCACTCGGCTCCGGCGCCACCCTCGCCGTCAGCTACGCCACCGGCGCCGTCTGCGGCTTGGTCTCCGGCCAACCCACGCAGCGCATAGTCTGCTACCGGCGAGGCCAAACCATCTCCGTCGAGCCCAACATCTCCTTCTCGTCAATCTCCGGCGGCCGGACCTCCCTCTGCGGCCTCCGGTCCGGCGGCTACGTCCTGCTTTGTTACGACAATCTACTCTCCCAAGACTCGGTCTTTGTTTCGAAAAGAATCTACTTTAACGAAAGTGGTGAATTGGAAAACATAGCCGTCGGAGAAAACCATATTTGCGCCACCGTGGTGGGTTCCGGCGCCGTGAAATGTTGGCGAGAAGACGACGGAACGTTTCAACTGCCATCTGGGTCGGAGCAATTCGGGTCCATCTCATCTGGGTCGGGCTTCTCCTGTGGAATTTCGAAGAACGGCTCAAGGGTCCGGTGCTGGGGGACTAGAACTTCCATGGCGGCCGAGATTGAAAATGGGTTTGGAGAAACGGCCATGGCGAGTATCGAAGCAGGTGCTTATCACGTGTGTGGAGTCAATGTTACTGGGTCAATAATCTGCAGAGGCAGCAACGACTCTGGTCAATTGAATGCACCGCCGGGAACGTTTTCCGGTTTAGCTCTCGGACCTAAACACGGCTGTGCGATTAGAGCTTTAAACCAGTCTGTGATTTGTTGGGGCGGTGGAGGCCAGTTTGGGTCTAATGTGACTTCAGCGACGTCGTTTGAGGTGATCGTTTCCGGGTCTAATTTCACTTGTGGATTAACCACAAGTAACTTTTCGATTATATGTTGGGGTCCTGGTTGGCCTAGTTCAGAGGTTGAAGGTGAGCTTGGTCTGGGGGAGATTCTTCCGGGTCGTTGTGTACGGTCCTCTTGTAGTGAACGTGGTATCTATCCTCAATCTCAAAAGCTCTGTTATGACTCTGGGAACATTTGCAATCCTTGGAAGCCGATTTTGGTTCCTACATTACCACCCTCACCGTCGATTTCACCGCCGCCGGAATCTCCATCCCGGGCTTTGAAAACGGGGTTGTTAGTGTTCTGCATTGTGGGTTCTATAGGAGGGTTTTCGGGGATTTGTAGTGTGATTTATTGTTTGTGGAAGGGTGGTTGTTTTGGGCAAAAGAAAGTTCATAATTCAGTTCAGCCTACAATCACCAGAGCTGGCAGTTCCAATCACGGGAACACATCAAATAACAGCCCTCCTTCGAGATCAGCCACCATAAGGCGGCAGAGCTCGAGGATCATGAGGCGGCAGAGGAGTGGGCCTTCGTCGAAGCACCCAGATAGGGCTGAGGAGTTCTCACTGGCTGAGCTTGCAGCAGCTACAAATGGTTTTGCATTGGAGAACAAGATTGGTGCAGGGAGCTTTGGGGTGGTGTACAGAGGGAAATTGGATGACGGGCGCGAAGTTGCTATCAAGAGAGGAGAAACAGCAACCAAGGTGAAGAAGTACCAAGAGAAGGATACTGCTTTCGATTCGGAGTTGTCATTCTTGTCGAGGCTTCATCACAAGCATTTGGTTAGGCTTGTTGGGTATTGTGAGGAGAAGGAGGAGAGGCTGTTGGTTTATGAGTACATGAAGAATGGTGCGCTCCATGATCATTTACATCACAAGAACAATGTCGAGAAGAGTAGTAGTTTGATTAATTCTTGGAAAATGAGGATCAAGGTGGCTTTAGATGCTGCCAGAGGCATTGAGTATCTGCACAACTATGCAGTCCCTTCTATAATTCACAGAGATATAAAGTCCTCTAACATTCTGATAGACGGAAATTGGACTGGAAGAGTATCTGATTTCGGATTATCACTATTGGGTCCGGAAAATGACAGCGACTATAGGCCAATGAAGGCAGCTGGAACCGTTGGCTACATTGATCCAGAGTACTATGGTTTAAACTTATTAACAGCAAAGAGTGATGTGTATGGGCTTGGTGTGGTGTTGTTGGAGCTTCTGACAGGAAGAAGAGCAATCTTCAGGAACAGTGAAGACGGAGGGACACCTACCAGTGTTGTGGACTTCACTGTGCCGCTGATCATGGCCGGAGAGTTAGATAAGGTTTTAGACCCAAGGGTTGGACCTCCGGAAATCAATGAAGCCGAGGCGGTTGAGTTGGTGGCGTATACTGCAATGCATTGTGTGAATTTGGAAGGTAAAGATAGACCAACCATGACTGACATTGTGGCCAATTTGGAGCGAGCATTGAGTCTCTGTGAGGAAAGCCCCGGTGGCAGCATATCTAGCGGCTCAATCATTTCTGCCGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004553 GO:0004560 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0006516 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009100 GO:0009987 GO:0015928 GO:0016787 GO:0016798 GO:0019538 GO:0030163 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044424 GO:0044444 GO:0044464 GO:0071704 GO:1901135 GO:1901136 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00511 map00511

Pfam Domains

Protein Families

Alpha_L_fucos F5_F8_type_C

Protein Analysis

790

Amino Acids

84.52

Weight (kDa)

7.2

Isoelectric Point (pI)

43.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	482 - 763	8.4e-43	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	483 - 765	1.6e-40	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003070)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g28480 FvH4_7g28490
malus_domestica	MD01G1188500.v1.1 MD01G1188600.v1.1
prunus_persica	Prupe.2G285300_v2.0.a1
pyrus_communis	pycom01g20020 pycom01g20030
rosa_chinensis	RchiOBHm_Chr1g0375771 RchiOBHm_Chr1g0375821 RchiOBHm_Chr1g0375841 RchiOBHm_Chr1g0375871
rosa_laevigata	RLG00000026648 RLG00000026649 RLG00000026652 RLG00000026654
rosa_multiflora	Rmu_sc0000487.1_g000052 Rmu_sc0001943.1_g000004 Rmu_sc0001943.1_g000006 Rmu_sc0001943.1_g000007
rosa_roxburghii	Rroxscaffold_4G00282570 Rroxscaffold_4G00282610 Rroxscaffold_4G00282640
rosa_rugosa	Rorug01G0391800 Rorug01G0391900 Rorug01G0392000
rosa_samantha	Rh1AG403600 Rh1AG403700 Rh1AG403800 Rh1BG367200 Rh1BG367300 Rh1CG379800 Rh1CG380000 Rh1CG380100 Rh1DG397200 Rh1DG397300
rosa_wichuraiana	Rw0G000980 Rw0G023580 Rw4G005900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	605
AatII	GACGTC	1 cut(s)	824
Acc36I	ACCTGC	1 cut(s)	605
AccB1I	GGYRCC	3 cut(s)	95, 125, 410
AccB7I	CCANNNNNTGG	1 cut(s)	2180
AccI	GTMKAC	1 cut(s)	2228
AccII	CGCG	1 cut(s)	1512
AccIII	TCCGGA	2 cut(s)	1924, 2188
AclI	AACGTT	2 cut(s)	443, 707
AclWI	GGATC	3 cut(s)	1355, 1778, 1976
AcoI	YGGCCR	6 cut(s)	148, 235, 564, 594, 2145, 2289
AcsI	RAATTY	2 cut(s)	510, 2248
AcuI	CTGAAG	2 cut(s)	798, 2065
AcvI	CACGTG	1 cut(s)	628
AcyI	GRCGYC	4 cut(s)	96, 126, 411, 821
AfaI	GTAC	5 cut(s)	969, 1487, 1559, 1682, 1991
AflIII	ACRYGT	1 cut(s)	627
AgsI	TTSAA	5 cut(s)	449, 575, 691, 926, 1126
AjnI	CCWGG	1 cut(s)	901
AjuI	GAANNNNNNNTTGG	8 cut(s)	200, 232, 567, 599, 918, 950, 1043, 1075
AleI	CACNNNNGTG	3 cut(s)	398, 630, 741
Alw21I	GWGCWC	1 cut(s)	1343
Alw26I	GTCTC	2 cut(s)	148, 2318
AlwI	GGATC	3 cut(s)	1355, 1778, 1976
Ama87I	CYCGRG	2 cut(s)	1116, 1342
Aor13HI	TCCGGA	2 cut(s)	1924, 2188
ApeKI	GCWGC	7 cut(s)	160, 669, 1424, 1427, 1790, 1958, 2337
ApoI	RAATTY	2 cut(s)	510, 2248
ArsI	GACNNNNNNTTYG	2 cut(s)	299, 331
AseI	ATTAAT	1 cut(s)	1752
Asp700I	GAANNNNTTC	1 cut(s)	709
AspLEI	GCGC	7 cut(s)	98, 128, 165, 392, 413, 1512, 1699
AsuC2I	CCSGG	6 cut(s)	702, 844, 957, 1117, 1118, 2331
AsuHPI	GGTGA	9 cut(s)	43, 55, 362, 844, 941, 1074, 1086, 1252, 1561
AsuII	TTCGAA	2 cut(s)	323, 515
AvaI	CYCGRG	2 cut(s)	1116, 1342
AvaII	GGWCC	9 cut(s)	240, 261, 477, 532, 728, 899, 972, 1922, 2183
BalI	TGGCCA	1 cut(s)	2291
BanI	GGYRCC	3 cut(s)	95, 125, 410
BanII	GRGCYC	2 cut(s)	207, 1343
BbrPI	CACGTG	1 cut(s)	628
BbsI	GAAGAC	2 cut(s)	438, 2100
Bbv12I	GWGCWC	1 cut(s)	1343
BbvCI	CCTCAGC	1 cut(s)	1398
BbvI	GCAGC	7 cut(s)	172, 681, 1436, 1439, 1777, 1970, 2349
BccI	CCATC	5 cut(s)	41, 200, 463, 488, 1120
BceAI	ACGGC	7 cut(s)	92, 113, 353, 398, 538, 609, 754
BcgI	CGANNNNNNTGC	2 cut(s)	599, 633
BciT130I	CCWGG	1 cut(s)	903
BciVI	GTATCC	1 cut(s)	1564
BclI	TGATCA	2 cut(s)	1705, 2139
BcnI	CCSGG	6 cut(s)	702, 844, 957, 1117, 1118, 2331
BcoDI	GTCTC	2 cut(s)	148, 2318
BfaI	CTAG	3 cut(s)	549, 912, 2346
BfmI	CTRYAG	3 cut(s)	661, 1161, 1942
BfoI	RGCGCY	3 cut(s)	99, 129, 414
BfuAI	ACCTGC	1 cut(s)	605
BfuI	GTATCC	1 cut(s)	1564
BglI	GCCNNNNNGGC	1 cut(s)	2334
BlpI	GCTNAGC	1 cut(s)	1416
BmcAI	AGTACT	1 cut(s)	1991
Bme1390I	CCNGG	7 cut(s)	702, 844, 903, 957, 1117, 1118, 2331
Bme18I	GGWCC	9 cut(s)	240, 261, 477, 532, 728, 899, 972, 1922, 2183
BmeT110I	CYCGRG	2 cut(s)	1116, 1342
BmrFI	CCNGG	7 cut(s)	702, 844, 903, 957, 1117, 1118, 2331
BmrI	ACTGGG	1 cut(s)	657
BmsI	GCATC	1 cut(s)	1777
BmuI	ACTGGG	1 cut(s)	657
BoxI	GACNNNNGTC	1 cut(s)	681
BpiI	GAAGAC	2 cut(s)	438, 2100
BplI	GAGNNNNNCTC	2 cut(s)	1391, 1423
Bpu10I	CCTNAGC	1 cut(s)	1398
Bpu1102I	GCTNAGC	1 cut(s)	1416
Bpu14I	TTCGAA	2 cut(s)	323, 515
BpuEI	CTTGAG	1 cut(s)	511
BpuMI	CCSGG	6 cut(s)	702, 844, 957, 1117, 1118, 2331
BsaAI	YACGTR	1 cut(s)	628
BsaHI	GRCGYC	4 cut(s)	96, 126, 411, 821
BsaI	GGTCTC	1 cut(s)	148
BsaJI	CCNNGG	9 cut(s)	396, 558, 597, 1046, 1116, 1545, 2174, 2205, 2329
BsaWI	WCCGGW	5 cut(s)	258, 534, 713, 1924, 2188
BsaXI	ACNNNNNCTCC	4 cut(s)	627, 657, 1652, 1682
Bse118I	RCCGGY	2 cut(s)	122, 177
Bse1I	ACTGG	6 cut(s)	652, 763, 793, 1416, 1891, 2112
Bse3DI	GCAATG	1 cut(s)	2241
BseAI	TCCGGA	2 cut(s)	1924, 2188
BseBI	CCWGG	1 cut(s)	903
BseDI	CCNNGG	9 cut(s)	396, 558, 597, 1046, 1116, 1545, 2174, 2205, 2329
BseGI	GGATG	3 cut(s)	33, 1112, 1507
BseMI	GCAATG	1 cut(s)	2241
BseMII	CTCAG	2 cut(s)	1389, 1407
BseNI	ACTGG	6 cut(s)	652, 763, 793, 1416, 1891, 2112
BseRI	GAGGAG	5 cut(s)	1378, 1415, 1545, 1664, 1673
BseX3I	CGGCCG	2 cut(s)	235, 564
BseXI	GCAGC	7 cut(s)	172, 681, 1436, 1439, 1777, 1970, 2349
BseYI	CCCAGC	1 cut(s)	540
BsgI	GTGCAG	2 cut(s)	1485, 1796
Bsh1236I	CGCG	1 cut(s)	1512
Bsh1285I	CGRYCG	2 cut(s)	238, 567
BshNI	GGYRCC	3 cut(s)	95, 125, 410
BsiEI	CGRYCG	2 cut(s)	238, 567
BsiHKAI	GWGCWC	1 cut(s)	1343
BsiHKCI	CYCGRG	2 cut(s)	1116, 1342
BslFI	GGGAC	3 cut(s)	559, 1811, 2116
BsmAI	GTCTC	2 cut(s)	148, 2318
BsmFI	GGGAC	3 cut(s)	559, 1811, 2116
BsmI	GAATGC	1 cut(s)	697
Bso31I	GGTCTC	1 cut(s)	148
BsoBI	CYCGRG	2 cut(s)	1116, 1342
Bsp119I	TTCGAA	2 cut(s)	323, 515
Bsp1286I	GDGCHC	2 cut(s)	207, 1343
Bsp13I	TCCGGA	2 cut(s)	1924, 2188
Bsp1407I	TGTACA	1 cut(s)	1485
Bsp143I	GATC	7 cut(s)	834, 1316, 1347, 1705, 1770, 1981, 2139
Bsp1720I	GCTNAGC	1 cut(s)	1416
Bsp19I	CCATGG	2 cut(s)	558, 597
BspCNI	CTCAG	2 cut(s)	1390, 1408
BspEI	TCCGGA	2 cut(s)	1924, 2188
BspFNI	CGCG	1 cut(s)	1512
BspHI	TCATGA	1 cut(s)	1350
BspMAI	CTGCAG	1 cut(s)	665
BspMI	ACCTGC	1 cut(s)	605
BspPI	GGATC	3 cut(s)	1355, 1778, 1976
BspQI	GCTCTTC	1 cut(s)	2065
BspT104I	TTCGAA	2 cut(s)	323, 515
BspT107I	GGYRCC	3 cut(s)	95, 125, 410
BspTNI	GGTCTC	1 cut(s)	148
BsrDI	GCAATG	1 cut(s)	2241
BsrFI	RCCGGY	2 cut(s)	122, 177
BsrGI	TGTACA	1 cut(s)	1485
BsrI	ACTGG	6 cut(s)	652, 763, 793, 1416, 1891, 2112
BssAI	RCCGGY	2 cut(s)	122, 177
BssECI	CCNNGG	9 cut(s)	396, 558, 597, 1046, 1116, 1545, 2174, 2205, 2329
BssMI	GATC	7 cut(s)	834, 1316, 1347, 1705, 1770, 1981, 2139
BssNAI	GTATAC	1 cut(s)	2229
BssNI	GRCGYC	4 cut(s)	96, 126, 411, 821
BssT1I	CCWWGG	5 cut(s)	558, 597, 1046, 1545, 2174
Bst1107I	GTATAC	1 cut(s)	2229
Bst2UI	CCWGG	1 cut(s)	903
Bst4CI	ACNGT	6 cut(s)	397, 972, 1086, 1969, 2090, 2131
Bst6I	CTCTTC	3 cut(s)	1730, 1885, 2065
BstACI	GRCGYC	4 cut(s)	96, 126, 411, 821
BstAPI	GCANNNNNTGC	1 cut(s)	171
BstAUI	TGTACA	1 cut(s)	1485
BstBAI	YACGTR	1 cut(s)	628
BstBI	TTCGAA	2 cut(s)	323, 515
BstC8I	GCNNGC	3 cut(s)	1270, 1422, 2304
BstDEI	CTNAG	2 cut(s)	1398, 1416
BstDSI	CCRYGG	3 cut(s)	396, 558, 597
BstF5I	GGATG	3 cut(s)	33, 1112, 1507
BstFNI	CGCG	1 cut(s)	1512
BstH2I	RGCGCY	3 cut(s)	99, 129, 414
BstHHI	GCGC	7 cut(s)	98, 128, 165, 392, 413, 1512, 1699
BstKTI	GATC	7 cut(s)	837, 1319, 1350, 1708, 1773, 1984, 2142
BstMAI	GTCTC	2 cut(s)	148, 2318
BstMBI	GATC	7 cut(s)	834, 1316, 1347, 1705, 1770, 1981, 2139
BstMCI	CGRYCG	2 cut(s)	238, 567
BstNI	CCWGG	1 cut(s)	903
BstPAI	GACNNNNGTC	1 cut(s)	681
BstSCI	CCNGG	7 cut(s)	700, 842, 901, 955, 1115, 1116, 2329
BstSFI	CTRYAG	3 cut(s)	661, 1161, 1942
BstUI	CGCG	1 cut(s)	1512
BstV1I	GCAGC	7 cut(s)	172, 681, 1436, 1439, 1777, 1970, 2349
BstV2I	GAAGAC	2 cut(s)	438, 2100
BstXI	CCANNNNNNTGG	2 cut(s)	400, 2119
BstZ17I	GTATAC	1 cut(s)	2229
BstZI	CGGCCG	2 cut(s)	235, 564
BsuI	GTATCC	1 cut(s)	1564
BtgI	CCRYGG	3 cut(s)	396, 558, 597
BtsCI	GGATG	3 cut(s)	33, 1112, 1507
BtsIMutI	CAGTG	4 cut(s)	1409, 2095, 2119, 2127
BveI	ACCTGC	1 cut(s)	605
Cac8I	GCNNGC	3 cut(s)	1270, 1422, 2304
CciI	TCATGA	1 cut(s)	1350
CfoI	GCGC	7 cut(s)	98, 128, 165, 392, 413, 1512, 1699
Cfr10I	RCCGGY	2 cut(s)	122, 177
Cfr9I	CCCGGG	1 cut(s)	1116
CpoI	CGGWCCG	1 cut(s)	261
Csp6I	GTAC	5 cut(s)	968, 1486, 1558, 1681, 1990
CspI	CGGWCCG	1 cut(s)	261
CviAII	CATG	8 cut(s)	80, 559, 598, 1351, 1684, 1703, 2143, 2275
CviQI	GTAC	5 cut(s)	968, 1486, 1558, 1681, 1990
DdeI	CTNAG	2 cut(s)	1398, 1416
DinI	GGCGCC	3 cut(s)	97, 127, 412
DpnI	GATC	7 cut(s)	836, 1318, 1349, 1707, 1772, 1983, 2141
DpnII	GATC	7 cut(s)	834, 1316, 1347, 1705, 1770, 1981, 2139
DraI	TTTAAA	2 cut(s)	759, 2001
EaeI	YGGCCR	6 cut(s)	148, 235, 564, 594, 2145, 2289
EagI	CGGCCG	2 cut(s)	235, 564
Eam1104I	CTCTTC	3 cut(s)	1730, 1885, 2065
EarI	CTCTTC	3 cut(s)	1730, 1885, 2065
Ecl136II	GAGCTC	1 cut(s)	1341
EclXI	CGGCCG	2 cut(s)	235, 564
Eco130I	CCWWGG	5 cut(s)	558, 597, 1046, 1545, 2174
Eco24I	GRGCYC	2 cut(s)	207, 1343
Eco31I	GGTCTC	1 cut(s)	148
Eco47I	GGWCC	9 cut(s)	240, 261, 477, 532, 728, 899, 972, 1922, 2183
Eco52I	CGGCCG	2 cut(s)	235, 564
Eco53kI	GAGCTC	1 cut(s)	1341
Eco57I	CTGAAG	2 cut(s)	798, 2065
Eco72I	CACGTG	1 cut(s)	628
Eco88I	CYCGRG	2 cut(s)	1116, 1342
EcoICRI	GAGCTC	1 cut(s)	1341
EcoO109I	RGGNCCY	1 cut(s)	899
EcoRII	CCWGG	1 cut(s)	901
EcoT14I	CCWWGG	5 cut(s)	558, 597, 1046, 1545, 2174
EcoT22I	ATGCAT	1 cut(s)	2241
EcoT38I	GRGCYC	2 cut(s)	207, 1343
EgeI	GGCGCC	3 cut(s)	97, 127, 412
EheI	GGCGCC	3 cut(s)	97, 127, 412
ErhI	CCWWGG	5 cut(s)	558, 597, 1046, 1545, 2174
FaeI	CATG	8 cut(s)	83, 562, 601, 1354, 1687, 1706, 2146, 2278
FalI	AAGNNNNNCTT	2 cut(s)	918, 950
FaqI	GGGAC	3 cut(s)	559, 1811, 2116
FatI	CATG	8 cut(s)	79, 558, 597, 1350, 1683, 1702, 2142, 2274
FbaI	TGATCA	2 cut(s)	1705, 2139
FblI	GTMKAC	1 cut(s)	2228
FokI	GGATG	3 cut(s)	20, 1099, 1514
FriOI	GRGCYC	2 cut(s)	207, 1343
FspBI	CTAG	3 cut(s)	549, 912, 2346
GlaI	GCGC	7 cut(s)	97, 127, 164, 391, 412, 1511, 1698
GsaI	CCCAGC	1 cut(s)	544
HaeII	RGCGCY	3 cut(s)	99, 129, 414
HhaI	GCGC	7 cut(s)	98, 128, 165, 392, 413, 1512, 1699
Hin1I	GRCGYC	4 cut(s)	96, 126, 411, 821
Hin1II	CATG	8 cut(s)	83, 562, 601, 1354, 1687, 1706, 2146, 2278
Hin6I	GCGC	7 cut(s)	96, 126, 163, 390, 411, 1510, 1697
HinP1I	GCGC	7 cut(s)	96, 126, 163, 390, 411, 1510, 1697
HinfI	GANTC	9 cut(s)	308, 330, 636, 677, 949, 1025, 1106, 1583, 2311
HphI	GGTGA	9 cut(s)	43, 55, 362, 844, 941, 1074, 1086, 1252, 1561
Hpy166II	GTNNAC	6 cut(s)	63, 968, 986, 1486, 2122, 2229
Hpy188I	TCNGA	9 cut(s)	374, 466, 728, 919, 1588, 1869, 1900, 1907, 2061
Hpy188III	TCNNGA	8 cut(s)	1314, 1351, 1525, 1732, 1925, 1985, 2083, 2189
Hpy8I	GTNNAC	6 cut(s)	63, 968, 986, 1486, 2122, 2229
Hpy99I	CGWCG	7 cut(s)	203, 374, 440, 823, 826, 1090, 1381
HpyCH4III	ACNGT	6 cut(s)	397, 972, 1086, 1969, 2090, 2131
HpyCH4IV	ACGT	6 cut(s)	273, 443, 627, 707, 821, 988
HpyF3I	CTNAG	2 cut(s)	1398, 1416
HpySE526I	ACGT	6 cut(s)	273, 443, 627, 707, 821, 988
Hsp92I	GRCGYC	4 cut(s)	96, 126, 411, 821
Hsp92II	CATG	8 cut(s)	83, 562, 601, 1354, 1687, 1706, 2146, 2278
HspAI	GCGC	7 cut(s)	96, 126, 163, 390, 411, 1510, 1697
KasI	GGCGCC	3 cut(s)	95, 125, 410
Kpn2I	TCCGGA	2 cut(s)	1924, 2188
Ksp22I	TGATCA	2 cut(s)	1705, 2139
Kzo9I	GATC	7 cut(s)	834, 1316, 1347, 1705, 1770, 1981, 2139
LguI	GCTCTTC	1 cut(s)	2065
LmnI	GCTCC	6 cut(s)	95, 466, 1470, 1704, 2053, 2299
Lsp1109I	GCAGC	7 cut(s)	172, 681, 1436, 1439, 1777, 1970, 2349
LweI	GCATC	1 cut(s)	1777
MaeI	CTAG	3 cut(s)	549, 912, 2346
MaeII	ACGT	6 cut(s)	273, 443, 627, 707, 821, 988
MaeIII	GTNAC	4 cut(s)	284, 643, 808, 875
MalI	GATC	7 cut(s)	836, 1318, 1349, 1707, 1772, 1983, 2141
MboI	GATC	7 cut(s)	834, 1316, 1347, 1705, 1770, 1981, 2139
MfeI	CAATTG	1 cut(s)	686
MhlI	GDGCHC	2 cut(s)	207, 1343
MlsI	TGGCCA	1 cut(s)	2291
MluNI	TGGCCA	1 cut(s)	2291
Mly113I	GGCGCC	3 cut(s)	96, 126, 411
MlyI	GAGTC	5 cut(s)	302, 645, 671, 1019, 2320
MmeI	TCCRAC	4 cut(s)	352, 444, 2031, 2161
Mox20I	TGGCCA	1 cut(s)	2291
Mph1103I	ATGCAT	1 cut(s)	2241
MroI	TCCGGA	2 cut(s)	1924, 2188
MroXI	GAANNNNTTC	1 cut(s)	709
MscI	TGGCCA	1 cut(s)	2291
MseI	TTAA	6 cut(s)	339, 758, 866, 1752, 2000, 2009
MslI	CAYNNNNRTG	4 cut(s)	398, 630, 741, 1818
Msp20I	TGGCCA	1 cut(s)	2291
MspA1I	CMGCKG	2 cut(s)	1961, 2137
MspR9I	CCNGG	7 cut(s)	702, 844, 903, 957, 1117, 1118, 2331
MssI	GTTTAAAC	1 cut(s)	2001
MunI	CAATTG	1 cut(s)	686
Mva1269I	GAATGC	1 cut(s)	697
MvaI	CCWGG	1 cut(s)	903
MvnI	CGCG	1 cut(s)	1512
NarI	GGCGCC	3 cut(s)	96, 126, 411
NciI	CCSGG	6 cut(s)	702, 844, 957, 1117, 1118, 2331
NcoI	CCATGG	2 cut(s)	558, 597
NdeII	GATC	7 cut(s)	834, 1316, 1347, 1705, 1770, 1981, 2139
NlaIII	CATG	8 cut(s)	83, 562, 601, 1354, 1687, 1706, 2146, 2278
NmeAIII	GCCGAG	3 cut(s)	66, 592, 2230
NmuCI	GTSAC	1 cut(s)	808
NsiI	ATGCAT	1 cut(s)	2241
NspV	TTCGAA	2 cut(s)	323, 515
OliI	CACNNNNGTG	3 cut(s)	398, 630, 741
PaeR7I	CTCGAG	1 cut(s)	1342
PagI	TCATGA	1 cut(s)	1350
PaqCI	CACCTGC	1 cut(s)	605
PciSI	GCTCTTC	1 cut(s)	2065
PcsI	WCGNNNNNNNCGW	1 cut(s)	599
PctI	GAATGC	1 cut(s)	697
PdmI	GAANNNNTTC	1 cut(s)	709
PfeI	GAWTC	4 cut(s)	330, 949, 1106, 1583
PflFI	GACNNNGTC	1 cut(s)	311
PflMI	CCANNNNNTGG	1 cut(s)	2180
PleI	GAGTC	5 cut(s)	302, 644, 671, 1019, 2319
PluTI	GGCGCC	3 cut(s)	99, 129, 414
PmaCI	CACGTG	1 cut(s)	628
PmeI	GTTTAAAC	1 cut(s)	2001
PmlI	CACGTG	1 cut(s)	628
PpsI	GAGTC	5 cut(s)	302, 644, 671, 1019, 2319
Ppu21I	YACGTR	1 cut(s)	628
PpuMI	RGGWCCY	1 cut(s)	899
PshAI	GACNNNNGTC	1 cut(s)	681
PshBI	ATTAAT	1 cut(s)	1752
Psp124BI	GAGCTC	1 cut(s)	1343
Psp1406I	AACGTT	2 cut(s)	443, 707
Psp5II	RGGWCCY	1 cut(s)	899
Psp6I	CCWGG	1 cut(s)	901
PspCI	CACGTG	1 cut(s)	628
PspFI	CCCAGC	1 cut(s)	540
PspGI	CCWGG	1 cut(s)	901
PspPPI	RGGWCCY	1 cut(s)	899
PspXI	VCTCGAGB	1 cut(s)	1342
PstI	CTGCAG	1 cut(s)	665
PsyI	GACNNNGTC	1 cut(s)	311
PvuII	CAGCTG	1 cut(s)	1961
RsaI	GTAC	5 cut(s)	969, 1487, 1559, 1682, 1991
RsaNI	GTAC	5 cut(s)	968, 1486, 1558, 1681, 1990
RseI	CAYNNNNRTG	4 cut(s)	398, 630, 741, 1818
Rsr2I	CGGWCCG	1 cut(s)	261
RsrII	CGGWCCG	1 cut(s)	261
SacI	GAGCTC	1 cut(s)	1343
SapI	GCTCTTC	1 cut(s)	2065
SaqAI	TTAA	6 cut(s)	339, 758, 866, 1752, 2000, 2009
Sau3AI	GATC	7 cut(s)	834, 1316, 1347, 1705, 1770, 1981, 2139
ScaI	AGTACT	1 cut(s)	1991
SchI	GAGTC	5 cut(s)	302, 645, 671, 1019, 2320
ScrFI	CCNGG	7 cut(s)	702, 844, 903, 957, 1117, 1118, 2331
SduI	GDGCHC	2 cut(s)	207, 1343
SfaNI	GCATC	1 cut(s)	1777
SfcI	CTRYAG	3 cut(s)	661, 1161, 1942
SfoI	GGCGCC	3 cut(s)	97, 127, 412
Sfr274I	CTCGAG	1 cut(s)	1342
SfuI	TTCGAA	2 cut(s)	323, 515
SgrAI	CRCCGGYG	1 cut(s)	122
SinI	GGWCC	9 cut(s)	240, 261, 477, 532, 728, 899, 972, 1922, 2183
SlaI	CTCGAG	1 cut(s)	1342
SmaI	CCCGGG	1 cut(s)	1118
SmiMI	CAYNNNNRTG	4 cut(s)	398, 630, 741, 1818
SmlI	CTYRAG	2 cut(s)	526, 1342
SmoI	CTYRAG	2 cut(s)	526, 1342
SspDI	GGCGCC	3 cut(s)	95, 125, 410
SspMI	CTAG	3 cut(s)	549, 912, 2346
SstI	GAGCTC	1 cut(s)	1343
StyD4I	CCNGG	7 cut(s)	700, 842, 901, 955, 1115, 1116, 2329
StyI	CCWWGG	5 cut(s)	558, 597, 1046, 1545, 2174
TaaI	ACNGT	6 cut(s)	397, 972, 1086, 1969, 2090, 2131
TaiI	ACGT	6 cut(s)	276, 446, 630, 710, 824, 991
TaqII	GACCGA	1 cut(s)	301
TatI	WGTACW	3 cut(s)	1485, 1680, 1989
TfiI	GAWTC	4 cut(s)	330, 949, 1106, 1583
Tru1I	TTAA	6 cut(s)	339, 758, 866, 1752, 2000, 2009
Tru9I	TTAA	6 cut(s)	339, 758, 866, 1752, 2000, 2009
TscAI	CASTG	4 cut(s)	1416, 2095, 2119, 2134
TseFI	GTSAC	1 cut(s)	808
TseI	GCWGC	7 cut(s)	160, 669, 1424, 1427, 1790, 1958, 2337
Tsp45I	GTSAC	1 cut(s)	808
TspDTI	ATGAA	6 cut(s)	34, 1226, 1601, 1700, 1967, 2214
TspGWI	ACGGA	5 cut(s)	10, 187, 453, 1890, 2112
TspMI	CCCGGG	1 cut(s)	1116
TspRI	CASTG	4 cut(s)	1416, 2095, 2119, 2134
Tth111I	GACNNNGTC	1 cut(s)	311
Van91I	CCANNNNNTGG	1 cut(s)	2180
VpaK11BI	GGWCC	9 cut(s)	240, 261, 477, 532, 728, 899, 972, 1922, 2183
VspI	ATTAAT	1 cut(s)	1752
XapI	RAATTY	2 cut(s)	510, 2248
XhoI	CTCGAG	1 cut(s)	1342
XmaI	CCCGGG	1 cut(s)	1116
XmiI	GTMKAC	1 cut(s)	2228
XmnI	GAANNNNTTC	1 cut(s)	709
XspI	CTAG	3 cut(s)	549, 912, 2346
ZraI	GACGTC	1 cut(s)	822
ZrmI	AGTACT	1 cut(s)	1991
Zsp2I	ATGCAT	1 cut(s)	2241

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.