pycom09g14740

AP2-like ethylene-responsive transcription factor

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
Physical Location & Seq
Forward (+)
14490817 .. 14494048
3232 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g14740.7

Sequence Viewer

Length: 1116 bp
ATGGCGAAAACCTCACAGAAAACGAAGAACAGTACTGCTGGAAGCACTAACAACAGCAGCACCACCACAACCACCACTAGCAGTACTGCTACAACAACAACAAAAGGCAAGCGGACACGAAAAAGCGTTCGCCGTGACTCTCCGCCCCAGCGGAGCTCCGTCTACCGTGGTGTCACGAGGCATCGATGGACGGGTCGATTCGAAGCTCATTTGTGGGACAAGAATTGCTGGAATGAGTCGCAGAACAAGAAAGGAAGACAAGTCTATCTAGGGGCATATGATGACGAAGAAGCTGCTGGACGTGCTTATGACTTGGCAGCATTAAAGTACTGGGGACGAGATACAGTCCTCAATTTCCCAGTATCCACTTATCAAGAAGAGATCATAGAAATGGAGAGCCAGTCGAAAGAAGAATACATTGGATCATTGCGAAGGAAAAGTAGTGGATTTTCTCGCGGGGTTTCAAAGTATAGAGGCGTCGCAAGACACCATCAAAATGGAAGATGGGAAGCTCGAATTGGCAGAGTATATGGAAACAAATACCTTTACCTTGGAACCTACGCTACGCAAGAAGAAGCAGCCATAGCATATGACATGGCAGCAATAGAATACCGTGGACTTAATGCCGTTACAAACTTTGATCTTAGCCGTTACATCAAGTCTCTGTGCCCAGATAATACAAACGGGCCTAACGACGCTCAACAAAACCCTAACGGTGACCTCCATCAAATGCAAAACCCTAATGGTGTCCTCAATCAAATGCACAACCCTGACTGTAAACCAGAACTGGAGATCATGCCTGACCACACGAGTTCGAGTAGCGCTAGTCAGTCAGCCGTAGTTTTGCCACGGTCAGAAAATGGTTTATCGGCGTCATCCGCACCAGGGCTCTTGCTACAATCTCCTAAGTTTAAAGAAATGCTCGAGAGATCCTCTGTTACTGAATGCTCTCCAACTCTTTCAGAGCCGGAAATACGTAGACGCATTTTTCCTGATGACATTCAAACGTATTTTGATTGCCAAGACTTGAACAGCTTTGCGGAAGTAGACGACATTATTTTTGGTGACTTACGATCGTTTACTTCACCTGTTTTTCACTGTGAACTCGATGCATGA

Protein Analysis

372

Amino Acids

41.7

Weight (kDa)

7.63

Isoelectric Point (pI)

58.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 3 cut(s) 162, 979, 1047
AccII CGCG 1 cut(s) 456
AciI CCGC 6 cut(s) 112, 143, 151, 456, 879, 1040
AclWI GGATC 2 cut(s) 430, 924
AcyI GRCGYC 2 cut(s) 477, 872
AfaI GTAC 3 cut(s) 34, 85, 329
AfeI AGCGCT 1 cut(s) 823
AfiI CCNNNNNNNGG 1 cut(s) 885
AgsI TTSAA 3 cut(s) 465, 1004, 1030
AjiI CACGTC 1 cut(s) 302
AjnI CCWGG 1 cut(s) 883
AjuI GAANNNNNNNTTGG 4 cut(s) 402, 434, 501, 533
AluBI AGCT 5 cut(s) 156, 206, 293, 512, 1035
AluI AGCT 5 cut(s) 156, 206, 293, 512, 1035
Alw21I GWGCWC 1 cut(s) 158
Alw26I GTCTC 1 cut(s) 666
AlwI GGATC 2 cut(s) 430, 924
Ama87I CYCGRG 1 cut(s) 923
Aor51HI AGCGCT 1 cut(s) 823
AoxI GGCC 1 cut(s) 686
ApeKI GCWGC 5 cut(s) 57, 293, 317, 578, 599
ArsI GACNNNNNNTTYG 2 cut(s) 1043, 1075
AspLEI GCGC 1 cut(s) 824
AspS9I GGNCC 1 cut(s) 686
AsuHPI GGTGA 3 cut(s) 728, 1076, 1077
AsuII TTCGAA 1 cut(s) 201
AvaI CYCGRG 1 cut(s) 923
BaeGI GKGCMC 1 cut(s) 671
BanII GRGCYC 2 cut(s) 158, 891
BauI CACGAG 2 cut(s) 175, 808
BbsI GAAGAC 1 cut(s) 262
Bbv12I GWGCWC 1 cut(s) 158
BbvI GCAGC 5 cut(s) 69, 280, 329, 590, 611
BccI CCATC 4 cut(s) 180, 498, 498, 732
BceAI ACGGC 4 cut(s) 117, 611, 633, 821
BcgI CGANNNNNNTGC 2 cut(s) 275, 309
BciT130I CCWGG 1 cut(s) 885
BciVI GTATCC 1 cut(s) 373
BcoDI GTCTC 1 cut(s) 666
BfaI CTAG 3 cut(s) 78, 269, 825
BfoI RGCGCY 1 cut(s) 825
BfuI GTATCC 1 cut(s) 373
BisI GCNGC 5 cut(s) 58, 294, 318, 579, 600
BlsI GCNGC 5 cut(s) 59, 295, 319, 580, 601
BmcAI AGTACT 3 cut(s) 34, 85, 329
Bme1390I CCNGG 1 cut(s) 885
BmeT110I CYCGRG 1 cut(s) 923
BmgBI CACGTC 1 cut(s) 302
BmgT120I GGNCC 1 cut(s) 686
BmiI GGNNCC 1 cut(s) 556
BmrFI CCNGG 1 cut(s) 885
BmrI ACTGGG 2 cut(s) 340, 353
BmsI GCATC 2 cut(s) 190, 1099
BmuI ACTGGG 2 cut(s) 340, 353
BpiI GAAGAC 1 cut(s) 262
BplI GAGNNNNNCTC 2 cut(s) 917, 949
BpmI CTGGAG 1 cut(s) 809
Bpu14I TTCGAA 1 cut(s) 201
Bsa29I ATCGAT 1 cut(s) 184
BsaAI YACGTR 1 cut(s) 977
BsaHI GRCGYC 2 cut(s) 477, 872
BsaJI CCNNGG 5 cut(s) 166, 550, 613, 848, 884
BsaXI ACNNNNNCTCC 2 cut(s) 386, 416
Bsc4I CCNNNNNNNGG 1 cut(s) 885
Bse1I ACTGG 4 cut(s) 335, 359, 400, 792
Bse3DI GCAATG 1 cut(s) 425
BseBI CCWGG 1 cut(s) 885
BseCI ATCGAT 1 cut(s) 184
BseDI CCNNGG 5 cut(s) 166, 550, 613, 848, 884
BseGI GGATG 1 cut(s) 875
BseLI CCNNNNNNNGG 1 cut(s) 885
BseMI GCAATG 1 cut(s) 425
BseNI ACTGG 4 cut(s) 335, 359, 400, 792
BseSI GKGCMC 1 cut(s) 671
BseXI GCAGC 5 cut(s) 69, 280, 329, 590, 611
BseYI CCCAGC 1 cut(s) 147
Bsh1236I CGCG 1 cut(s) 456
Bsh1285I CGRYCG 1 cut(s) 1076
BshFI GGCC 1 cut(s) 688
BshVI ATCGAT 1 cut(s) 184
BsiEI CGRYCG 1 cut(s) 1076
BsiHKAI GWGCWC 1 cut(s) 158
BsiHKCI CYCGRG 1 cut(s) 923
BsiSI CCGG 1 cut(s) 968
BslFI GGGAC 2 cut(s) 230, 348
BslI CCNNNNNNNGG 1 cut(s) 885
BsmAI GTCTC 1 cut(s) 666
BsmFI GGGAC 2 cut(s) 230, 348
BsmI GAATGC 1 cut(s) 950
BsnI GGCC 1 cut(s) 688
BsoBI CYCGRG 1 cut(s) 923
Bsp119I TTCGAA 1 cut(s) 201
Bsp1286I GDGCHC 3 cut(s) 158, 671, 891
Bsp143I GATC 6 cut(s) 381, 422, 640, 792, 929, 1073
BspACI CCGC 6 cut(s) 112, 143, 151, 456, 879, 1040
BspANI GGCC 1 cut(s) 688
BspDI ATCGAT 1 cut(s) 184
BspFNI CGCG 1 cut(s) 456
BspLI GGNNCC 1 cut(s) 556
BspPI GGATC 2 cut(s) 430, 924
BspT104I TTCGAA 1 cut(s) 201
BsrDI GCAATG 1 cut(s) 425
BsrI ACTGG 4 cut(s) 335, 359, 400, 792
BssECI CCNNGG 5 cut(s) 166, 550, 613, 848, 884
BssMI GATC 6 cut(s) 381, 422, 640, 792, 929, 1073
BssNI GRCGYC 2 cut(s) 477, 872
BssSI CACGAG 2 cut(s) 175, 808
BssT1I CCWWGG 1 cut(s) 550
Bst2BI CACGAG 2 cut(s) 175, 808
Bst2UI CCWGG 1 cut(s) 885
Bst4CI ACNGT 8 cut(s) 32, 167, 346, 614, 716, 776, 852, 1100
Bst6I CTCTTC 1 cut(s) 372
BstACI GRCGYC 2 cut(s) 477, 872
BstBAI YACGTR 1 cut(s) 977
BstBI TTCGAA 1 cut(s) 201
BstC8I GCNNGC 1 cut(s) 110
BstDEI CTNAG 2 cut(s) 644, 906
BstDSI CCRYGG 3 cut(s) 166, 613, 848
BstEII GGTNACC 1 cut(s) 716
BstF5I GGATG 1 cut(s) 875
BstFNI CGCG 1 cut(s) 456
BstH2I RGCGCY 1 cut(s) 825
BstHHI GCGC 1 cut(s) 824
BstKTI GATC 6 cut(s) 384, 425, 643, 795, 932, 1076
BstMAI GTCTC 1 cut(s) 666
BstMBI GATC 6 cut(s) 381, 422, 640, 792, 929, 1073
BstMCI CGRYCG 1 cut(s) 1076
BstMWI GCNNNNNNNGC 3 cut(s) 302, 584, 878
BstNI CCWGG 1 cut(s) 885
BstPI GGTNACC 1 cut(s) 716
BstSCI CCNGG 1 cut(s) 883
BstSLI GKGCMC 1 cut(s) 671
BstSNI TACGTA 1 cut(s) 977
BstUI CGCG 1 cut(s) 456
BstV1I GCAGC 5 cut(s) 69, 280, 329, 590, 611
BstV2I GAAGAC 1 cut(s) 262
BstX2I RGATCY 1 cut(s) 929
BstXI CCANNNNNNTGG 1 cut(s) 497
BstYI RGATCY 1 cut(s) 929
Bsu15I ATCGAT 1 cut(s) 184
BsuI GTATCC 1 cut(s) 373
BsuRI GGCC 1 cut(s) 688
BsuTUI ATCGAT 1 cut(s) 184
BtgI CCRYGG 3 cut(s) 166, 613, 848
BtrI CACGTC 1 cut(s) 302
BtsCI GGATG 1 cut(s) 875
BtsIMutI CAGTG 1 cut(s) 1096
Cac8I GCNNGC 1 cut(s) 110
CfoI GCGC 1 cut(s) 824
Cfr13I GGNCC 1 cut(s) 686
ClaI ATCGAT 1 cut(s) 184
CseI GACGC 4 cut(s) 466, 704, 861, 990
Csp6I GTAC 3 cut(s) 33, 84, 328
CviAII CATG 3 cut(s) 595, 796, 1113
CviQI GTAC 3 cut(s) 33, 84, 328
DdeI CTNAG 2 cut(s) 644, 906
DpnI GATC 6 cut(s) 383, 424, 642, 794, 931, 1075
DpnII GATC 6 cut(s) 381, 422, 640, 792, 929, 1073
DraI TTTAAA 1 cut(s) 913
Eam1104I CTCTTC 1 cut(s) 372
EarI CTCTTC 1 cut(s) 372
EciI GGCGGA 1 cut(s) 132
Ecl136II GAGCTC 1 cut(s) 156
Eco105I TACGTA 1 cut(s) 977
Eco130I CCWWGG 1 cut(s) 550
Eco24I GRGCYC 2 cut(s) 158, 891
Eco47III AGCGCT 1 cut(s) 823
Eco53kI GAGCTC 1 cut(s) 156
Eco88I CYCGRG 1 cut(s) 923
Eco91I GGTNACC 1 cut(s) 716
EcoICRI GAGCTC 1 cut(s) 156
EcoO65I GGTNACC 1 cut(s) 716
EcoRII CCWGG 1 cut(s) 883
EcoT14I CCWWGG 1 cut(s) 550
EcoT22I ATGCAT 1 cut(s) 1114
EcoT38I GRGCYC 2 cut(s) 158, 891
ErhI CCWWGG 1 cut(s) 550
FaeI CATG 3 cut(s) 598, 799, 1116
FaqI GGGAC 2 cut(s) 230, 348
FatI CATG 3 cut(s) 594, 795, 1112
FauI CCCGC 1 cut(s) 449
FauNDI CATATG 2 cut(s) 277, 589
FblI GTMKAC 3 cut(s) 162, 979, 1047
Fnu4HI GCNGC 5 cut(s) 58, 294, 318, 579, 600
FokI GGATG 1 cut(s) 862
FriOI GRGCYC 2 cut(s) 158, 891
Fsp4HI GCNGC 5 cut(s) 58, 294, 318, 579, 600
FspBI CTAG 3 cut(s) 78, 269, 825
GlaI GCGC 1 cut(s) 823
GluI GCNGC 5 cut(s) 58, 294, 318, 579, 600
GsaI CCCAGC 1 cut(s) 151
GsuI CTGGAG 1 cut(s) 809
HaeII RGCGCY 1 cut(s) 825
HaeIII GGCC 1 cut(s) 688
HapII CCGG 1 cut(s) 968
HgaI GACGC 4 cut(s) 466, 704, 861, 990
HhaI GCGC 1 cut(s) 824
Hin1I GRCGYC 2 cut(s) 477, 872
Hin1II CATG 3 cut(s) 598, 799, 1116
Hin6I GCGC 1 cut(s) 822
HinP1I GCGC 1 cut(s) 822
HinfI GANTC 3 cut(s) 137, 198, 236
HpaII CCGG 1 cut(s) 968
HphI GGTGA 3 cut(s) 728, 1076, 1077
Hpy166II GTNNAC 7 cut(s) 163, 617, 779, 980, 1048, 1080, 1103
Hpy188I TCNGA 2 cut(s) 856, 964
Hpy188III TCNNGA 4 cut(s) 175, 374, 925, 992
Hpy8I GTNNAC 7 cut(s) 163, 617, 779, 980, 1048, 1080, 1103
Hpy99I CGWCG 2 cut(s) 482, 698
HpyAV CCTTC 1 cut(s) 426
HpyCH4III ACNGT 8 cut(s) 32, 167, 346, 614, 716, 776, 852, 1100
HpyCH4IV ACGT 3 cut(s) 301, 976, 1007
HpyCH4V TGCA 3 cut(s) 733, 763, 1112
HpyF10VI GCNNNNNNNGC 3 cut(s) 302, 584, 878
HpyF3I CTNAG 2 cut(s) 644, 906
HpySE526I ACGT 3 cut(s) 301, 976, 1007
Hsp92I GRCGYC 2 cut(s) 477, 872
Hsp92II CATG 3 cut(s) 598, 799, 1116
HspAI GCGC 1 cut(s) 822
Kzo9I GATC 6 cut(s) 381, 422, 640, 792, 929, 1073
LmnI GCTCC 2 cut(s) 153, 161
Lsp1109I GCAGC 5 cut(s) 69, 280, 329, 590, 611
LweI GCATC 2 cut(s) 190, 1099
MaeI CTAG 3 cut(s) 78, 269, 825
MaeII ACGT 3 cut(s) 301, 976, 1007
MaeIII GTNAC 7 cut(s) 134, 172, 628, 650, 716, 937, 1064
MalI GATC 6 cut(s) 383, 424, 642, 794, 931, 1075
MboI GATC 6 cut(s) 381, 422, 640, 792, 929, 1073
MboII GAAGA 7 cut(s) 37, 267, 299, 389, 422, 513, 584
MflI RGATCY 1 cut(s) 929
MhlI GDGCHC 3 cut(s) 158, 671, 891
MluCI AATT 3 cut(s) 223, 352, 516
MlyI GAGTC 2 cut(s) 131, 245
MmeI TCCRAC 1 cut(s) 977
MnlI CCTC 7 cut(s) 22, 171, 359, 467, 731, 761, 943
Mph1103I ATGCAT 1 cut(s) 1114
MseI TTAA 3 cut(s) 323, 621, 912
MslI CAYNNNNRTG 2 cut(s) 389, 495
MspA1I CMGCKG 1 cut(s) 151
MspI CCGG 1 cut(s) 968
MspR9I CCNGG 1 cut(s) 885
Mva1269I GAATGC 1 cut(s) 950
MvaI CCWGG 1 cut(s) 885
MvnI CGCG 1 cut(s) 456
MwoI GCNNNNNNNGC 3 cut(s) 302, 584, 878
NdeI CATATG 2 cut(s) 277, 589
NdeII GATC 6 cut(s) 381, 422, 640, 792, 929, 1073
NlaIII CATG 3 cut(s) 598, 799, 1116
NlaIV GGNNCC 1 cut(s) 556
NmuCI GTSAC 4 cut(s) 134, 172, 716, 1064
NsiI ATGCAT 1 cut(s) 1114
NspV TTCGAA 1 cut(s) 201
PaeR7I CTCGAG 1 cut(s) 923
PcsI WCGNNNNNNNCGW 1 cut(s) 690
PctI GAATGC 1 cut(s) 950
PfeI GAWTC 1 cut(s) 198
PkrI GCNGC 5 cut(s) 59, 295, 319, 580, 601
Ple19I CGATCG 1 cut(s) 1076
PleI GAGTC 2 cut(s) 131, 244
PpsI GAGTC 2 cut(s) 131, 244
Ppu21I YACGTR 1 cut(s) 977
Psp124BI GAGCTC 1 cut(s) 158
Psp6I CCWGG 1 cut(s) 883
PspEI GGTNACC 1 cut(s) 716
PspFI CCCAGC 1 cut(s) 147
PspGI CCWGG 1 cut(s) 883
PspN4I GGNNCC 1 cut(s) 556
PspPI GGNCC 1 cut(s) 686
PsrI GAACNNNNNNTAC 2 cut(s) 547, 579
PsuI RGATCY 1 cut(s) 929
PvuI CGATCG 1 cut(s) 1076
RsaI GTAC 3 cut(s) 34, 85, 329
RsaNI GTAC 3 cut(s) 33, 84, 328
RseI CAYNNNNRTG 2 cut(s) 389, 495
SacI GAGCTC 1 cut(s) 158
SaqAI TTAA 3 cut(s) 323, 621, 912
SatI GCNGC 5 cut(s) 58, 294, 318, 579, 600
Sau3AI GATC 6 cut(s) 381, 422, 640, 792, 929, 1073
Sau96I GGNCC 1 cut(s) 686
ScaI AGTACT 3 cut(s) 34, 85, 329
SchI GAGTC 2 cut(s) 131, 245
ScrFI CCNGG 1 cut(s) 885
SduI GDGCHC 3 cut(s) 158, 671, 891
SfaNI GCATC 2 cut(s) 190, 1099
Sfr274I CTCGAG 1 cut(s) 923
SfuI TTCGAA 1 cut(s) 201
SlaI CTCGAG 1 cut(s) 923
SmiMI CAYNNNNRTG 2 cut(s) 389, 495
SmlI CTYRAG 1 cut(s) 923
SmoI CTYRAG 1 cut(s) 923
SnaBI TACGTA 1 cut(s) 977
Sse9I AATT 3 cut(s) 223, 352, 516
SsiI CCGC 6 cut(s) 112, 143, 151, 456, 879, 1040
SspMI CTAG 3 cut(s) 78, 269, 825
SstI GAGCTC 1 cut(s) 158
StyD4I CCNGG 1 cut(s) 883
StyI CCWWGG 1 cut(s) 550
TaaI ACNGT 8 cut(s) 32, 167, 346, 614, 716, 776, 852, 1100
TaiI ACGT 3 cut(s) 304, 979, 1010
TaqI TCGA 8 cut(s) 184, 196, 201, 404, 514, 815, 924, 1107
TasI AATT 3 cut(s) 223, 352, 516
TatI WGTACW 3 cut(s) 32, 83, 327
TfiI GAWTC 1 cut(s) 198
Tru1I TTAA 3 cut(s) 323, 621, 912
Tru9I TTAA 3 cut(s) 323, 621, 912
TscAI CASTG 1 cut(s) 1103
TseFI GTSAC 4 cut(s) 134, 172, 716, 1064
TseI GCWGC 5 cut(s) 57, 293, 317, 578, 599
Tsp45I GTSAC 4 cut(s) 134, 172, 716, 1064
TspGWI ACGGA 1 cut(s) 148
TspRI CASTG 1 cut(s) 1103
XhoI CTCGAG 1 cut(s) 923
XmiI GTMKAC 3 cut(s) 162, 979, 1047
XspI CTAG 3 cut(s) 78, 269, 825
ZrmI AGTACT 3 cut(s) 34, 85, 329
Zsp2I ATGCAT 1 cut(s) 1114
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.