Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0002324

Physical Location & Seq

Genomic Coordinates Reverse (-)

22256136 .. 22262249

Gene Structure 6114 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom10g19090.9

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2274 bp

ATGGCGTACGTCTTTACTAACTTACGCCCACTACAATTTTTGCCGGTCGTATACTATTACTGGAAGAAATTGGATTTGGAGGGAAAAAGAAGAGAGAAGAAAATGCCGGTGGCAAGGCCTGAAACCTCTGATTCCAGAGTCATTGCTCACGTCGACATGGACTGCTTCTACGTTCAAGTGGAGCAAAGGAAACAACCAGATTTAAGGGGCTTACCAACAGCTGTGGTACAGTATAACGCCTGGAAAGGTGGGGCCTTGATTGCTGTCAGCTATGAGGCCCGAAAATGTGGTGTGAAACGTTCGATGCGAGGTTCTGAGTCAAAGCAAGTTTGCCCACAAATTCAGCTGGTCCAAGTCCCAGTAGCTCGTGGTAAAGCTGACTTGAGCACATACCGCAATGCGGGATCAGAGGTGGTTTCTATTCTGGCAATGAAGGGTCGATGTGAGAGGGCATCAATTGACGAAGTGTATCTTGATCTTACTGATGCAGCAGAAACCATGTTAGCGGAAGCTCCTCCCGAGAGCTTGGAAGTAATTGAAGAGGAAGCTCTCAAGTCGCATGTTTTGGGGCTTCAAAGCGAGGACAGCAGTGATGCCAAAGAAAATGTGCGAAAATGGCTTTGCAGGAGCAGTGTTGATCGACGTGATAAACTATTAGCTTGTGGGGCACTCATTGTTGCAGAACTCAGGTTGCAAGTGTTGAAGGAGACTGAGTTTACTTGTTCAGCTGGCATTGCTCATAATAAGATGCTGGCTAAACTTGCAAGTGGTATGAATAAACCTGCGCAACAAACTATTGTTCCGTTCTCATCTGTAAAAGGATTGCTAGATCCCTTGCCAATTAAGAAAATGAAGCAGCTTGGAGGAAAGTTGGGGAGTTCATTACAAAGTGACCTGGGTATTAACACTGTTGGTGACCTTTTGCAGTTTTCAGAGGCAAAACTACAAGAACTCTATGGAATCAATACCGGTACCTGGTTATGGAATATTGCTAGAGGGGTCAGCGGGGAAGAAGTTGAGGGGCGCCTTCTTCCGAAAAGCCATGGTTCTGGGAAGACATTTCCTGGACCTCAGGCTTTGAAGACGATTGCTTCTGTTCAGCATTGGCTTAATCAACTTTGTGAGGAATTGAGTGAACGTCTTCAATCAGACTTGGACCAGAACAAAAGGATAGCTCACACACTAATGATGCATGGTACTGCATACAAGGCCAGTGATTCAGATTCACATAAGAAGTTTCCTTCGAAGTCTTGTCCCTTAAGGTATGGGACTGCCAAGATACAAGAGGATGCTTTTAGTCTATTTCAAGCTGCATTACGAGAATACTTGGGATCATACACAGCCAAAATACAAGGAAATCAAAACAACCAATGGGGAATAACGTCGCTTTCTGTTTCAGCAAGTAAAATTGTTCCTATACCATCTGGAACAGCTTCAATCACGAAATACTTTCATGGCAATCATACGTCTTGCTCTTCGACAATGCAAACACAGGATACCATTTTTGAAGAAGCTGATCCTCTGTCACCTGCAGGTAAAGAAAGCAACCTGGAGGTGAATGTAACTAAGCCACAGATTGAGTTCCCTGGTGAAGAAACCACGATCAAGCATGCTGTGCCTAGTTCGGATCAACTGGAAGACAAAAAGGATTTGTTGAATGACCAGAATCCATGTTGCTCTTCAGAAAATCAAATACAAGATGAATTCACCCAAGAATCTGTACCCTTGTCGACCTCAGGAAGCGAGCACTGCTCACAAATGAATCAAAGTCGACAGATGAACATTAATTATGGGGAAGAACCATGTGTTATTACATTTAACGTGCCTAGTTCCAATAGACAGGAGCAGAAAAGAAAAGCAGTGAAAGACAAGGGAACATCTTCGATATTGAGATTCTTTAAGAATCAAGATCCATCTTGCGCTCCACAAAGGCCAGAACGTGTTAAAAATACTGAAGATGTTAAAGCACCGCTATCTGTTGGCTCCCAGTCTAGAAATGATAGCAGTTTGGATAGTAATCAATCTGAGCTGCCAAAAGAAAGACCCTTAGAAGAAGCTGGGGCTTCCATTGTGGGTGGTTCATCTCAAATTGAACAAAGAACAGGAGCATCATGGAGTTACAATGTCGATGAGATTGACCCCTCTGTCATCGATGAGCTGCCACCGGAAATACAACAAGAAGTTCGTGCCTTGCTCCGGCCTCACAAGCGGCATAATGTAGTAAAACGGGGTTCCAGTATTGCTCATTATTTCTCACCAACCAAGAACGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000731 GO:0003674 GO:0003676 GO:0003677 GO:0003684 GO:0003824 GO:0003887 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006139 GO:0006259 GO:0006281 GO:0006282 GO:0006301 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009650 GO:0009987 GO:0010224 GO:0010225 GO:0016740 GO:0016772 GO:0016779 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019985 GO:0031323 GO:0031974 GO:0031981 GO:0033554 GO:0034061 GO:0034641 GO:0034645 GO:0034654 GO:0042276 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051171 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0070987 GO:0071704 GO:0071897 GO:0080090 GO:0080134 GO:0080135 GO:0090304 GO:0097159 GO:0140097 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:2001020

KEGG Pathways

Metabolic & Signaling

ko01524 ko03460 map01524 map03460

Pfam Domains

Protein Families

IMS IMS_C

Protein Analysis

758

Amino Acids

83.8

Weight (kDa)

6.95

Isoelectric Point (pI)

56.62

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002324)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G44740 AT5G44740 AT5G44740
fragaria_vesca	FvH4_3g13010 FvH4_3g13010 FvH4_3g13010 FvH4_3g13010
malus_domestica	MD10G1227100.v1.1 MD10G1227200.v1.1
prunus_persica	Prupe.4G118000_v2.0.a1 Prupe.4G118000_v2.0.a1 Prupe.4G118000_v2.0.a1
pyrus_communis	pycom10g19090
rosa_chinensis	RchiOBHm_Chr4g0406911 RchiOBHm_Chr4g0406921 RchiOBHm_Chr5g0021111 RchiOBHm_Chr5g0021121 RchiOBHm_Chr5g0021171 RchiOBHm_Chr5g0021201
rosa_laevigata	RLG00000032590 RLG00000032594
rosa_multiflora	Rmu_sc0002467.1_g000007 Rmu_sc0002467.1_g000009 Rmu_sc0002467.1_g000013 Rmu_sc0002467.1_g000015 Rmu_sc0012431.1_g000002
rosa_roxburghii	Rroxscaffold_1G00057300 Rroxscaffold_1G00057320 Rroxscaffold_1G00057330 Rroxscaffold_5G00351670
rosa_rugosa	Rorug05G0064800 Rorug05G0065100 Rorug05G0065100
rosa_samantha	Rh5AG154000 Rh5BG153700 Rh5CG166700 Rh5CG167300 Rh5DG154100
rosa_wichuraiana	Rw1G022470 Rw5G013690 Rw5G013710 Rw5G013730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1537
AasI	GACNNNNNNGTC	1 cut(s)	2144
Acc16I	TGCGCA	1 cut(s)	786
Acc36I	ACCTGC	3 cut(s)	790, 1523, 1537
Acc65I	GGTACC	1 cut(s)	971
AccB1I	GGYRCC	2 cut(s)	971, 1023
AccI	GTMKAC	4 cut(s)	51, 153, 1730, 1771
AciI	CCGC	6 cut(s)	394, 401, 506, 1005, 1970, 2209
AclI	AACGTT	1 cut(s)	298
AclWI	GGATC	6 cut(s)	412, 824, 1339, 1511, 1635, 1904
AcsI	RAATTY	2 cut(s)	339, 1703
AcuI	CTGAAG	2 cut(s)	1665, 1974
AcyI	GRCGYC	1 cut(s)	1024
AfaI	GTAC	5 cut(s)	8, 228, 973, 1198, 1722
AfiI	CCNNNNNNNGG	4 cut(s)	400, 975, 981, 2196
AflII	CTTAAG	1 cut(s)	1258
AflIII	ACRYGT	1 cut(s)	1939
AgeI	ACCGGT	1 cut(s)	968
AjiI	CACGTC	2 cut(s)	151, 644
AjnI	CCWGG	6 cut(s)	239, 894, 974, 1063, 1548, 1585
AjuI	GAANNNNNNNTTGG	2 cut(s)	59, 91
Alw21I	GWGCWC	2 cut(s)	389, 1749
Alw26I	GTCTC	1 cut(s)	701
AlwI	GGATC	6 cut(s)	412, 824, 1339, 1511, 1635, 1904
Ama87I	CYCGRG	1 cut(s)	518
AoxI	GGCC	6 cut(s)	116, 252, 276, 1209, 1931, 2198
ApeKI	GCWGC	5 cut(s)	488, 856, 1310, 2029, 2158
ApoI	RAATTY	2 cut(s)	339, 1703
AseI	ATTAAT	1 cut(s)	1785
AsiGI	ACCGGT	1 cut(s)	968
Asp700I	GAANNNNTTC	3 cut(s)	1140, 1432, 1879
Asp718I	GGTACC	1 cut(s)	971
AspLEI	GCGC	3 cut(s)	787, 1026, 1922
AspS9I	GGNCC	5 cut(s)	252, 277, 349, 1067, 1156
AsuHPI	GGTGA	6 cut(s)	926, 1518, 1567, 1601, 1699, 2247
AsuII	TTCGAA	1 cut(s)	1244
AvaI	CYCGRG	1 cut(s)	518
AvaII	GGWCC	3 cut(s)	349, 1067, 1156
AxyI	CCTNAGG	2 cut(s)	1071, 1735
BaeGI	GKGCMC	1 cut(s)	670
BanI	GGYRCC	2 cut(s)	971, 1023
BauI	CACGAG	1 cut(s)	366
BbsI	GAAGAC	4 cut(s)	1061, 1088, 1133, 1644
Bbv12I	GWGCWC	2 cut(s)	389, 1749
BbvI	GCAGC	5 cut(s)	500, 868, 1297, 2016, 2145
BccI	CCATC	2 cut(s)	1429, 1921
BciT130I	CCWGG	6 cut(s)	241, 896, 976, 1065, 1550, 1587
BciVI	GTATCC	1 cut(s)	1489
BcoDI	GTCTC	1 cut(s)	701
BfaI	CTAG	5 cut(s)	827, 993, 1620, 1827, 1992
BfmI	CTRYAG	1 cut(s)	1530
BfoI	RGCGCY	1 cut(s)	1027
BfrI	CTTAAG	1 cut(s)	1258
BfuAI	ACCTGC	3 cut(s)	790, 1523, 1537
BfuI	GTATCC	1 cut(s)	1489
BisI	GCNGC	6 cut(s)	489, 857, 1311, 2030, 2159, 2210
BlsI	GCNGC	6 cut(s)	490, 858, 1312, 2031, 2160, 2211
Bme1390I	CCNGG	6 cut(s)	241, 896, 976, 1065, 1550, 1587
Bme18I	GGWCC	3 cut(s)	349, 1067, 1156
BmeT110I	CYCGRG	1 cut(s)	518
BmgBI	CACGTC	2 cut(s)	151, 644
BmgT120I	GGNCC	5 cut(s)	252, 277, 349, 1067, 1156
BmiI	GGNNCC	5 cut(s)	253, 973, 1025, 1984, 2233
BmrFI	CCNGG	6 cut(s)	241, 896, 976, 1065, 1550, 1587
BmrI	ACTGGG	2 cut(s)	353, 1981
BmsI	GCATC	8 cut(s)	294, 461, 475, 583, 738, 1179, 1279, 2117
BmuI	ACTGGG	2 cut(s)	353, 1981
BpiI	GAAGAC	4 cut(s)	1061, 1088, 1133, 1644
BplI	GAGNNNNNCTC	2 cut(s)	1736, 1768
BpmI	CTGGAG	1 cut(s)	1571
Bpu14I	TTCGAA	1 cut(s)	1244
BpuEI	CTTGAG	2 cut(s)	403, 536
Bsa29I	ATCGAT	1 cut(s)	2151
BsaBI	GATNNNNATC	1 cut(s)	2016
BsaHI	GRCGYC	1 cut(s)	1024
BsaJI	CCNNGG	3 cut(s)	895, 1042, 1585
BsaWI	WCCGGW	2 cut(s)	968, 2164
BsaXI	ACNNNNNCTCC	2 cut(s)	698, 728
Bsc4I	CCNNNNNNNGG	4 cut(s)	400, 975, 981, 2196
Bse118I	RCCGGY	3 cut(s)	43, 106, 968
Bse1I	ACTGG	6 cut(s)	65, 359, 1212, 1638, 1987, 2235
Bse21I	CCTNAGG	2 cut(s)	1071, 1735
Bse3DI	GCAATG	4 cut(s)	141, 403, 435, 732
Bse8I	GATNNNNATC	1 cut(s)	2016
BseBI	CCWGG	6 cut(s)	241, 896, 976, 1065, 1550, 1587
BseCI	ATCGAT	1 cut(s)	2151
BseDI	CCNNGG	3 cut(s)	895, 1042, 1585
BseGI	GGATG	1 cut(s)	1294
BseJI	GATNNNNATC	1 cut(s)	2016
BseLI	CCNNNNNNNGG	4 cut(s)	400, 975, 981, 2196
BseMI	GCAATG	4 cut(s)	141, 403, 435, 732
BseMII	CTCAG	6 cut(s)	306, 700, 702, 1085, 1749, 2016
BseNI	ACTGG	6 cut(s)	65, 359, 1212, 1638, 1987, 2235
BseRI	GAGGAG	1 cut(s)	504
BseSI	GKGCMC	1 cut(s)	670
BseXI	GCAGC	5 cut(s)	500, 868, 1297, 2016, 2145
BseYI	CCCAGC	1 cut(s)	2057
Bsh1285I	CGRYCG	1 cut(s)	48
BshFI	GGCC	6 cut(s)	118, 254, 278, 1211, 1933, 2200
BshNI	GGYRCC	2 cut(s)	971, 1023
BshTI	ACCGGT	1 cut(s)	968
BshVI	ATCGAT	1 cut(s)	2151
BsiEI	CGRYCG	1 cut(s)	48
BsiHKAI	GWGCWC	2 cut(s)	389, 1749
BsiHKCI	CYCGRG	1 cut(s)	518
BsiSI	CCGG	5 cut(s)	44, 107, 969, 2165, 2197
BsiWI	CGTACG	1 cut(s)	6
BslFI	GGGAC	3 cut(s)	341, 1239, 1282
BslI	CCNNNNNNNGG	4 cut(s)	400, 975, 981, 2196
BsmAI	GTCTC	1 cut(s)	701
BsmFI	GGGAC	3 cut(s)	341, 1239, 1282
BsnI	GGCC	6 cut(s)	118, 254, 278, 1211, 1933, 2200
BsoBI	CYCGRG	1 cut(s)	518
Bsp119I	TTCGAA	1 cut(s)	1244
Bsp1286I	GDGCHC	3 cut(s)	389, 670, 1749
Bsp143I	GATC	9 cut(s)	404, 475, 637, 829, 1331, 1516, 1602, 1627, 1909
Bsp19I	CCATGG	1 cut(s)	1042
BspACI	CCGC	6 cut(s)	394, 401, 506, 1005, 1970, 2209
BspANI	GGCC	6 cut(s)	118, 254, 278, 1211, 1933, 2200
BspCNI	CTCAG	6 cut(s)	307, 699, 703, 1084, 1748, 2017
BspDI	ATCGAT	1 cut(s)	2151
BspLI	GGNNCC	5 cut(s)	253, 973, 1025, 1984, 2233
BspMAI	CTGCAG	1 cut(s)	1534
BspMI	ACCTGC	3 cut(s)	790, 1523, 1537
BspPI	GGATC	6 cut(s)	412, 824, 1339, 1511, 1635, 1904
BspQI	GCTCTTC	2 cut(s)	1480, 1684
BspT104I	TTCGAA	1 cut(s)	1244
BspT107I	GGYRCC	2 cut(s)	971, 1023
BspTI	CTTAAG	1 cut(s)	1258
BsrDI	GCAATG	4 cut(s)	141, 403, 435, 732
BsrFI	RCCGGY	3 cut(s)	43, 106, 968
BsrI	ACTGG	6 cut(s)	65, 359, 1212, 1638, 1987, 2235
BssAI	RCCGGY	3 cut(s)	43, 106, 968
BssECI	CCNNGG	3 cut(s)	895, 1042, 1585
BssMI	GATC	9 cut(s)	404, 475, 637, 829, 1331, 1516, 1602, 1627, 1909
BssNAI	GTATAC	1 cut(s)	52
BssNI	GRCGYC	1 cut(s)	1024
BssSI	CACGAG	1 cut(s)	366
BssT1I	CCWWGG	1 cut(s)	1042
Bst1107I	GTATAC	1 cut(s)	52
Bst2BI	CACGAG	1 cut(s)	366
Bst2UI	CCWGG	6 cut(s)	241, 896, 976, 1065, 1550, 1587
Bst4CI	ACNGT	2 cut(s)	231, 910
Bst6I	CTCTTC	4 cut(s)	85, 534, 1480, 1684
BstACI	GRCGYC	1 cut(s)	1024
BstAFI	CTTAAG	1 cut(s)	1258
BstAPI	GCANNNNNTGC	1 cut(s)	1615
BstBI	TTCGAA	1 cut(s)	1244
BstC8I	GCNNGC	4 cut(s)	730, 753, 1611, 1745
BstDEI	CTNAG	8 cut(s)	315, 686, 711, 1071, 1566, 1735, 2025, 2047
BstDSI	CCRYGG	1 cut(s)	1042
BstEII	GGTNACC	1 cut(s)	914
BstF5I	GGATG	1 cut(s)	1294
BstH2I	RGCGCY	1 cut(s)	1027
BstHHI	GCGC	3 cut(s)	787, 1026, 1922
BstKTI	GATC	9 cut(s)	407, 478, 640, 832, 1334, 1519, 1605, 1630, 1912
BstMAI	GTCTC	1 cut(s)	701
BstMBI	GATC	9 cut(s)	404, 475, 637, 829, 1331, 1516, 1602, 1627, 1909
BstMCI	CGRYCG	1 cut(s)	48
BstNI	CCWGG	6 cut(s)	241, 896, 976, 1065, 1550, 1587
BstNSI	RCATGY	2 cut(s)	563, 1613
BstPI	GGTNACC	1 cut(s)	914
BstSCI	CCNGG	6 cut(s)	239, 894, 974, 1063, 1548, 1585
BstSFI	CTRYAG	1 cut(s)	1530
BstSLI	GKGCMC	1 cut(s)	670
BstV1I	GCAGC	5 cut(s)	500, 868, 1297, 2016, 2145
BstV2I	GAAGAC	4 cut(s)	1061, 1088, 1133, 1644
BstX2I	RGATCY	2 cut(s)	829, 1909
BstXI	CCANNNNNNTGG	1 cut(s)	1049
BstYI	RGATCY	2 cut(s)	829, 1909
BstZ17I	GTATAC	1 cut(s)	52
Bsu15I	ATCGAT	1 cut(s)	2151
Bsu36I	CCTNAGG	2 cut(s)	1071, 1735
BsuI	GTATCC	1 cut(s)	1489
BsuRI	GGCC	6 cut(s)	118, 254, 278, 1211, 1933, 2200
BsuTUI	ATCGAT	1 cut(s)	2151
BtgI	CCRYGG	1 cut(s)	1042
BtrI	CACGTC	2 cut(s)	151, 644
BtsCI	GGATG	1 cut(s)	1294
BtsI	GCAGTG	4 cut(s)	595, 637, 1747, 1866
BtsIMutI	CAGTG	6 cut(s)	595, 637, 906, 1219, 1747, 1866
BveI	ACCTGC	3 cut(s)	790, 1523, 1537
Cac8I	GCNNGC	4 cut(s)	730, 753, 1611, 1745
CfoI	GCGC	3 cut(s)	787, 1026, 1922
Cfr10I	RCCGGY	3 cut(s)	43, 106, 968
Cfr13I	GGNCC	5 cut(s)	252, 277, 349, 1067, 1156
ClaI	ATCGAT	1 cut(s)	2151
CsiI	ACCWGGT	1 cut(s)	974
Csp6I	GTAC	5 cut(s)	7, 227, 972, 1197, 1721
CspAI	ACCGGT	1 cut(s)	968
CspCI	CAANNNNNGTGG	2 cut(s)	204, 239
CviQI	GTAC	5 cut(s)	7, 227, 972, 1197, 1721
DdeI	CTNAG	8 cut(s)	315, 686, 711, 1071, 1566, 1735, 2025, 2047
DinI	GGCGCC	1 cut(s)	1025
DpnI	GATC	9 cut(s)	406, 477, 639, 831, 1333, 1518, 1604, 1629, 1911
DpnII	GATC	9 cut(s)	404, 475, 637, 829, 1331, 1516, 1602, 1627, 1909
DrdI	GACNNNNNNGTC	1 cut(s)	2144
DseDI	GACNNNNNNGTC	1 cut(s)	2144
Eam1104I	CTCTTC	4 cut(s)	85, 534, 1480, 1684
EarI	CTCTTC	4 cut(s)	85, 534, 1480, 1684
Eco130I	CCWWGG	1 cut(s)	1042
Eco147I	AGGCCT	1 cut(s)	118
Eco47I	GGWCC	3 cut(s)	349, 1067, 1156
Eco57I	CTGAAG	2 cut(s)	1665, 1974
Eco81I	CCTNAGG	2 cut(s)	1071, 1735
Eco88I	CYCGRG	1 cut(s)	518
Eco91I	GGTNACC	1 cut(s)	914
EcoO109I	RGGNCCY	1 cut(s)	252
EcoO65I	GGTNACC	1 cut(s)	914
EcoRI	GAATTC	1 cut(s)	1703
EcoRII	CCWGG	6 cut(s)	239, 894, 974, 1063, 1548, 1585
EcoT14I	CCWWGG	1 cut(s)	1042
EcoT22I	ATGCAT	1 cut(s)	1194
EgeI	GGCGCC	1 cut(s)	1025
EheI	GGCGCC	1 cut(s)	1025
ErhI	CCWWGG	1 cut(s)	1042
FalI	AAGNNNNNCTT	2 cut(s)	456, 488
FaqI	GGGAC	3 cut(s)	341, 1239, 1282
FauI	CCCGC	2 cut(s)	394, 998
FblI	GTMKAC	4 cut(s)	51, 153, 1730, 1771
Fnu4HI	GCNGC	6 cut(s)	489, 857, 1311, 2030, 2159, 2210
FokI	GGATG	1 cut(s)	1301
Fsp4HI	GCNGC	6 cut(s)	489, 857, 1311, 2030, 2159, 2210
FspBI	CTAG	5 cut(s)	827, 993, 1620, 1827, 1992
FspI	TGCGCA	1 cut(s)	786
GlaI	GCGC	3 cut(s)	786, 1025, 1921
GluI	GCNGC	6 cut(s)	489, 857, 1311, 2030, 2159, 2210
GsaI	CCCAGC	1 cut(s)	2061
GsuI	CTGGAG	1 cut(s)	1571
HaeII	RGCGCY	1 cut(s)	1027
HaeIII	GGCC	6 cut(s)	118, 254, 278, 1211, 1933, 2200
HapII	CCGG	5 cut(s)	44, 107, 969, 2165, 2197
HhaI	GCGC	3 cut(s)	787, 1026, 1922
Hin1I	GRCGYC	1 cut(s)	1024
Hin6I	GCGC	3 cut(s)	785, 1024, 1920
HinP1I	GCGC	3 cut(s)	785, 1024, 1920
HincII	GTYRAC	3 cut(s)	154, 1731, 1772
HindII	GTYRAC	3 cut(s)	154, 1731, 1772
HpaII	CCGG	5 cut(s)	44, 107, 969, 2165, 2197
HphI	GGTGA	6 cut(s)	926, 1518, 1567, 1601, 1699, 2247
Hpy166II	GTNNAC	6 cut(s)	52, 154, 717, 1136, 1731, 1772
Hpy188III	TCNNGA	8 cut(s)	135, 473, 518, 1425, 1441, 1737, 1907, 1992
Hpy8I	GTNNAC	6 cut(s)	52, 154, 717, 1136, 1731, 1772
Hpy99I	CGWCG	3 cut(s)	155, 645, 1387
HpyAV	CCTTC	4 cut(s)	427, 697, 1037, 1251
HpyCH4III	ACNGT	2 cut(s)	231, 910
HpyF3I	CTNAG	8 cut(s)	315, 686, 711, 1071, 1566, 1735, 2025, 2047
Hsp92I	GRCGYC	1 cut(s)	1024
HspAI	GCGC	3 cut(s)	785, 1024, 1920
KasI	GGCGCC	1 cut(s)	1023
KpnI	GGTACC	1 cut(s)	975
Kzo9I	GATC	9 cut(s)	404, 475, 637, 829, 1331, 1516, 1602, 1627, 1909
LguI	GCTCTTC	2 cut(s)	1480, 1684
LmnI	GCTCC	8 cut(s)	181, 517, 627, 1843, 1927, 1988, 2105, 2199
Lsp1109I	GCAGC	5 cut(s)	500, 868, 1297, 2016, 2145
LweI	GCATC	8 cut(s)	294, 461, 475, 583, 738, 1179, 1279, 2117
MabI	ACCWGGT	1 cut(s)	974
MaeI	CTAG	5 cut(s)	827, 993, 1620, 1827, 1992
MaeIII	GTNAC	5 cut(s)	890, 914, 1524, 1561, 2117
MalI	GATC	9 cut(s)	406, 477, 639, 831, 1333, 1518, 1604, 1629, 1911
MboI	GATC	9 cut(s)	404, 475, 637, 829, 1331, 1516, 1602, 1627, 1909
MfeI	CAATTG	1 cut(s)	456
MflI	RGATCY	2 cut(s)	829, 1909
MhlI	GDGCHC	3 cut(s)	389, 670, 1749
Mly113I	GGCGCC	1 cut(s)	1024
MlyI	GAGTC	2 cut(s)	147, 326
Mph1103I	ATGCAT	1 cut(s)	1194
MroXI	GAANNNNTTC	3 cut(s)	1140, 1432, 1879
MslI	CAYNNNNRTG	1 cut(s)	1184
MspA1I	CMGCKG	4 cut(s)	221, 346, 728, 1005
MspCI	CTTAAG	1 cut(s)	1258
MspI	CCGG	5 cut(s)	44, 107, 969, 2165, 2197
MspR9I	CCNGG	6 cut(s)	241, 896, 976, 1065, 1550, 1587
MunI	CAATTG	1 cut(s)	456
MvaI	CCWGG	6 cut(s)	241, 896, 976, 1065, 1550, 1587
NarI	GGCGCC	1 cut(s)	1024
NcoI	CCATGG	1 cut(s)	1042
NdeII	GATC	9 cut(s)	404, 475, 637, 829, 1331, 1516, 1602, 1627, 1909
NlaIV	GGNNCC	5 cut(s)	253, 973, 1025, 1984, 2233
NmuCI	GTSAC	3 cut(s)	890, 914, 1524
NsbI	TGCGCA	1 cut(s)	786
NsiI	ATGCAT	1 cut(s)	1194
NspI	RCATGY	2 cut(s)	563, 1613
NspV	TTCGAA	1 cut(s)	1244
PaeI	GCATGC	1 cut(s)	1613
PaqCI	CACCTGC	1 cut(s)	1537
PceI	AGGCCT	1 cut(s)	118
PciSI	GCTCTTC	2 cut(s)	1480, 1684
PcsI	WCGNNNNNNNCGW	1 cut(s)	304
PdmI	GAANNNNTTC	3 cut(s)	1140, 1432, 1879
PfeI	GAWTC	9 cut(s)	131, 960, 1217, 1223, 1666, 1715, 1762, 1893, 1903
Pfl23II	CGTACG	1 cut(s)	6
PfoI	TCCNGGA	1 cut(s)	1063
PinAI	ACCGGT	1 cut(s)	968
PkrI	GCNGC	6 cut(s)	490, 858, 1312, 2031, 2160, 2211
PleI	GAGTC	2 cut(s)	146, 325
PluTI	GGCGCC	1 cut(s)	1027
PpsI	GAGTC	2 cut(s)	146, 325
PshBI	ATTAAT	1 cut(s)	1785
Psp1406I	AACGTT	1 cut(s)	298
Psp6I	CCWGG	6 cut(s)	239, 894, 974, 1063, 1548, 1585
PspEI	GGTNACC	1 cut(s)	914
PspFI	CCCAGC	1 cut(s)	2057
PspGI	CCWGG	6 cut(s)	239, 894, 974, 1063, 1548, 1585
PspLI	CGTACG	1 cut(s)	6
PspN4I	GGNNCC	5 cut(s)	253, 973, 1025, 1984, 2233
PspPI	GGNCC	5 cut(s)	252, 277, 349, 1067, 1156
PstI	CTGCAG	1 cut(s)	1534
PsuI	RGATCY	2 cut(s)	829, 1909
PvuII	CAGCTG	3 cut(s)	221, 346, 728
RsaI	GTAC	5 cut(s)	8, 228, 973, 1198, 1722
RsaNI	GTAC	5 cut(s)	7, 227, 972, 1197, 1721
RseI	CAYNNNNRTG	1 cut(s)	1184
SalI	GTCGAC	3 cut(s)	152, 1729, 1770
SapI	GCTCTTC	2 cut(s)	1480, 1684
SatI	GCNGC	6 cut(s)	489, 857, 1311, 2030, 2159, 2210
Sau3AI	GATC	9 cut(s)	404, 475, 637, 829, 1331, 1516, 1602, 1627, 1909
Sau96I	GGNCC	5 cut(s)	252, 277, 349, 1067, 1156
SbfI	CCTGCAGG	1 cut(s)	1534
SchI	GAGTC	2 cut(s)	147, 326
ScrFI	CCNGG	6 cut(s)	241, 896, 976, 1065, 1550, 1587
SdaI	CCTGCAGG	1 cut(s)	1534
SduI	GDGCHC	3 cut(s)	389, 670, 1749
SexAI	ACCWGGT	1 cut(s)	974
SfaNI	GCATC	8 cut(s)	294, 461, 475, 583, 738, 1179, 1279, 2117
SfcI	CTRYAG	1 cut(s)	1530
SfoI	GGCGCC	1 cut(s)	1025
SfuI	TTCGAA	1 cut(s)	1244
SinI	GGWCC	3 cut(s)	349, 1067, 1156
SmiMI	CAYNNNNRTG	1 cut(s)	1184
SmlI	CTYRAG	3 cut(s)	382, 551, 1258
SmoI	CTYRAG	3 cut(s)	382, 551, 1258
SphI	GCATGC	1 cut(s)	1613
Sse8387I	CCTGCAGG	1 cut(s)	1534
SseBI	AGGCCT	1 cut(s)	118
SsiI	CCGC	6 cut(s)	394, 401, 506, 1005, 1970, 2209
SspDI	GGCGCC	1 cut(s)	1023
SspI	AATATT	1 cut(s)	988
SspMI	CTAG	5 cut(s)	827, 993, 1620, 1827, 1992
StuI	AGGCCT	1 cut(s)	118
StyD4I	CCNGG	6 cut(s)	239, 894, 974, 1063, 1548, 1585
StyI	CCWWGG	1 cut(s)	1042
TaaI	ACNGT	2 cut(s)	231, 910
TauI	GCSGC	1 cut(s)	2212
TfiI	GAWTC	9 cut(s)	131, 960, 1217, 1223, 1666, 1715, 1762, 1893, 1903
TscAI	CASTG	6 cut(s)	595, 637, 913, 1219, 1754, 1866
TseFI	GTSAC	3 cut(s)	890, 914, 1524
TseI	GCWGC	5 cut(s)	488, 856, 1310, 2029, 2158
Tsp45I	GTSAC	3 cut(s)	890, 914, 1524
TspDTI	ATGAA	9 cut(s)	446, 788, 866, 870, 1442, 1716, 1775, 1793, 2070
TspGWI	ACGGA	1 cut(s)	792
TspRI	CASTG	6 cut(s)	595, 637, 913, 1219, 1754, 1866
Vha464I	CTTAAG	1 cut(s)	1258
VpaK11BI	GGWCC	3 cut(s)	349, 1067, 1156
VspI	ATTAAT	1 cut(s)	1785
XapI	RAATTY	2 cut(s)	339, 1703
XbaI	TCTAGA	1 cut(s)	1991
XceI	RCATGY	2 cut(s)	563, 1613
XmiI	GTMKAC	4 cut(s)	51, 153, 1730, 1771
XmnI	GAANNNNTTC	3 cut(s)	1140, 1432, 1879
XspI	CTAG	5 cut(s)	827, 993, 1620, 1827, 1992
Zsp2I	ATGCAT	1 cut(s)	1194

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.