Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0002324

Physical Location & Seq

Genomic Coordinates Forward (+)

28174152 .. 28181648

Gene Structure 7497 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00351670.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2214 bp

ATGGACTCTTTGGAACAAAGGAAAAATCCGGAGTTAAGGGGCTTACCAACGGCTGTGGTACAGTATAACTCATGGCAAGGTGGGGGCTTGATTGCTGTCAGCTATGAGGCCCGGAAATATGGTGTGAAGCGTTCAATGCAAGGTGCTGAGTCAAAGAAAGTCTGCCCAGAAATTCAGCTGGTCCAAGTCCCTGTAGCATGTGGTAAAGCTGGCCTGAACTCATACCGGAATGCAGGTTCAGAGGTGGTTTCTATCCTATCAAGGAAGGGTCTATGTGAGAGGGCTTCAATTGACGAAGTGTATCTTGACCTTAACGATGCAGCAGAAACCATGTTAGCTGAAGCTCCTCCAGAAAGCTTGGAAGAAATTGAGGAGGAAGCTCTCAAGTCACATGTTTTGGGGCTCGATAATGAGGACGGAAGTGAAGCCAAAGAAAATGTGAGGAAATGGCTTTGCAAAAGCAATGCTGATCTATGTGATAAGCTTCTAGCTTGTGGGGCTCTCATTGTTGCAGAACTTAGGTTGCTAGTGTTGAAGGAGACAGAATTTACCTGTTCAGCTGGCATTGCTCATAATAAGGTTCAACACTGGCTTAATGAACTATGTGAAGATCTGAGTGAACGTCTTCAATTGGACTCGGATGAAAACAAAAGGATTGCTCATACGCTAGTGCTGCATGCCACAGCATACAAGTTATCCATCAGACCAGTGATTCAGATTCACAGAAGAAGTTCCCTTAGGTCTTCTCCCCTAAGGTATGGGGCTGCCAAGATACAAGAGGATGCTCTTAGCCTCTTTCAAGCTGCATTATGTGAATACTTGGGTTTGTACACAGCTAAAATTCAAGGAAGTCAAAATAACCGATGGGGAGTAACACCCCTCTCCGTTTCAGCAAGTAAAATTCTTCCCATACCATCAGGAACAGCTTCAATCGCAAAATACTTTCATGGTCATCAGCCATCCTCTTCCAGAAAGCAATCACAGGATAATTTCATAGAAGAATCTTCTCCCATGCCGCCTTCAGGTAATGAGAACTACTCGGAGGTGAATGTAACTACACCACAAATCGAGTTCCCTTATAAAGAAACTACGATCAAGTATGCTGTGCCTAGTTTGCATCAACTGGAAGACAAAAAGGATTTGCTGAATGACCAGTTACTTTTCCATCGAATTGCTTCACATGCATATAGGAAACCCCTTTGGCGTGCTGACTTTTCTGTAATATGTAATGGATATGCTATAATCCATGTTGCTCTCCAAAAAATCAGGGATAGGATGATTTCACCCAAGGAAGTTTACCATCGTCAATCTCAGATTGCTATATATGTAGGGAGTGAACTCTGCTCAGGAGTGAATCAACGTCAACTAGTAAAACATGATTCTCGTGAAGAACCTTGCCTTGCTGCAATACCTGATTCGAATAGACAGCAGCAGAAAAGGAAAACAGTGAAAGACCAGATCTTGGGTGACGGCTCGGCCTGGAACGTCGGCGAAGGGATAGGGTTCGTACGGCCCCGATTTGGTTCCAAGTATGGTGACTCGAGCTACGGCCACGAAACCTTCCCAAACTTCACCCACGGAGTTCGCCTTGACCTTCGAAGCTCCCGAACCACCCTTGCACGGCGGCGCTGTCTCTGGAAGCGGGCCGGAACTCAACCCCACCGAAACCTGCGATCAGCTTACATGCTAGTTAGGAAAGTCATTAGGCTTGATGAGACGAAGCGAGCAGCTGCCCCGACACCATTGGTGGTGGTCGGCGGCGGCTTTGCCACTAACTCCGGCGGCCATTTCCGGCCACTTCCGGGGGTCACAAGGACAGGAACATCTTCAATTTTGAGATTCTTTAACAACCAAGATTCATCTTCTGCTCCCCGAAAGCTGGAACATGTTGAAAATACTGAAGATATTAAACTGCCGCTATCTGCTGGTCCTCAGTCTAGAAGTGATAATTCTTTGGATCACAATCAATTGTTGTCAAAAGAAAGGCCTTTCGAAGAAACTGGGACTTCTAGTGCGCCTAGTTCAGCTCAATTCGAGCAAAGAAGGGGTGTATGGAGTTACAATACTGACGAGATTGGCCCCTCTGTCATTGAGGAGTTGCCACCAGAAATTCAACAAGAAGTTCGTGCCTGGCTCAGGCCTCACAAGTGGCAAAATGTAGTGAAACAGGGTTCTAGTATTGCCGATTATTTCTTACCCACAAGGACTGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000731 GO:0003674 GO:0003676 GO:0003677 GO:0003684 GO:0003824 GO:0003887 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006139 GO:0006259 GO:0006281 GO:0006282 GO:0006301 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009650 GO:0009987 GO:0010224 GO:0010225 GO:0016740 GO:0016772 GO:0016779 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019985 GO:0031323 GO:0031974 GO:0031981 GO:0033554 GO:0034061 GO:0034641 GO:0034645 GO:0034654 GO:0042276 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051171 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0070987 GO:0071704 GO:0071897 GO:0080090 GO:0080134 GO:0080135 GO:0090304 GO:0097159 GO:0140097 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:2001020

KEGG Pathways

Metabolic & Signaling

ko01524 ko03460 map01524 map03460

Pfam Domains

Protein Families

IMS IMS_C

Protein Analysis

737

Amino Acids

82.31

Weight (kDa)

8.75

Isoelectric Point (pI)

57.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IMS	PF00817	3 - 194	1.4e-28	impB/mucB/samB family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002324)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G44740 AT5G44740 AT5G44740
fragaria_vesca	FvH4_3g13010 FvH4_3g13010 FvH4_3g13010 FvH4_3g13010
malus_domestica	MD10G1227100.v1.1 MD10G1227200.v1.1
prunus_persica	Prupe.4G118000_v2.0.a1 Prupe.4G118000_v2.0.a1 Prupe.4G118000_v2.0.a1
pyrus_communis	pycom10g19090
rosa_chinensis	RchiOBHm_Chr4g0406911 RchiOBHm_Chr4g0406921 RchiOBHm_Chr5g0021111 RchiOBHm_Chr5g0021121 RchiOBHm_Chr5g0021171 RchiOBHm_Chr5g0021201
rosa_laevigata	RLG00000032590 RLG00000032594
rosa_multiflora	Rmu_sc0002467.1_g000007 Rmu_sc0002467.1_g000009 Rmu_sc0002467.1_g000013 Rmu_sc0002467.1_g000015 Rmu_sc0012431.1_g000002
rosa_roxburghii	Rroxscaffold_1G00057300 Rroxscaffold_1G00057320 Rroxscaffold_1G00057330 Rroxscaffold_5G00351670
rosa_rugosa	Rorug05G0064800 Rorug05G0065100 Rorug05G0065100
rosa_samantha	Rh5AG154000 Rh5BG153700 Rh5CG166700 Rh5CG167300 Rh5DG154100
rosa_wichuraiana	Rw1G022470 Rw5G013690 Rw5G013710 Rw5G013730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1080
Acc36I	ACCTGC	2 cut(s)	224, 1677
AccB7I	CCANNNNNTGG	1 cut(s)	1462
AccIII	TCCGGA	1 cut(s)	28
AciI	CCGC	7 cut(s)	1016, 1624, 1642, 1758, 1761, 1782, 1916
AclWI	GGATC	1 cut(s)	1965
AcoI	YGGCCR	3 cut(s)	1549, 1783, 1793
AcsI	RAATTY	5 cut(s)	171, 545, 840, 900, 2109
AcuI	CTGAAG	3 cut(s)	360, 1005, 1920
AfaI	GTAC	3 cut(s)	60, 830, 1509
AfiI	CCNNNNNNNGG	7 cut(s)	1022, 1462, 1520, 1620, 1802, 1879, 2136
AflIII	ACRYGT	2 cut(s)	391, 1885
AhlI	ACTAGT	1 cut(s)	1366
AjnI	CCWGG	2 cut(s)	1478, 2129
AloI	GAACNNNNNNTCC	2 cut(s)	220, 252
Alw26I	GTCTC	3 cut(s)	533, 1637, 1709
AlwI	GGATC	1 cut(s)	1965
Ama87I	CYCGRG	1 cut(s)	1540
Aor13HI	TCCGGA	1 cut(s)	28
ApeKI	GCWGC	8 cut(s)	320, 673, 764, 803, 1403, 1429, 1727, 1730
ApoI	RAATTY	5 cut(s)	171, 545, 840, 900, 2109
Asp700I	GAANNNNTTC	5 cut(s)	624, 730, 925, 1174, 1825
AspLEI	GCGC	2 cut(s)	1629, 2017
AspS9I	GGNCC	6 cut(s)	109, 181, 1512, 1644, 1928, 2078
AsuC2I	CCSGG	2 cut(s)	112, 1803
AsuHPI	GGTGA	5 cut(s)	1057, 1275, 1478, 1547, 1564
AsuII	TTCGAA	3 cut(s)	1418, 1597, 1992
AvaI	CYCGRG	1 cut(s)	1540
AvaII	GGWCC	2 cut(s)	181, 1928
AxyI	CCTNAGG	2 cut(s)	737, 752
BanII	GRGCYC	2 cut(s)	405, 502
BauI	CACGAG	1 cut(s)	1383
BbsI	GAAGAC	3 cut(s)	617, 735, 1134
BbvI	GCAGC	8 cut(s)	332, 660, 751, 790, 1390, 1441, 1717, 1739
BccI	CCATC	6 cut(s)	707, 858, 922, 967, 1173, 1308
BceAI	ACGGC	5 cut(s)	66, 1486, 1526, 1564, 1637
BciT130I	CCWGG	2 cut(s)	1480, 2131
BcnI	CCSGG	2 cut(s)	112, 1803
BcoDI	GTCTC	3 cut(s)	533, 1637, 1709
BcuI	ACTAGT	1 cut(s)	1366
BfmI	CTRYAG	1 cut(s)	192
BfoI	RGCGCY	1 cut(s)	1630
BfuAI	ACCTGC	2 cut(s)	224, 1677
BglII	AGATCT	2 cut(s)	610, 1458
Bme1390I	CCNGG	4 cut(s)	112, 1480, 1803, 2131
Bme18I	GGWCC	2 cut(s)	181, 1928
BmeT110I	CYCGRG	1 cut(s)	1540
BmgT120I	GGNCC	6 cut(s)	109, 181, 1512, 1644, 1928, 2078
BmiI	GGNNCC	3 cut(s)	1514, 1525, 2080
BmrFI	CCNGG	4 cut(s)	112, 1480, 1803, 2131
BmrI	ACTGGG	1 cut(s)	2010
BmsI	GCATC	3 cut(s)	307, 772, 1126
BmuI	ACTGGG	1 cut(s)	2010
BpiI	GAAGAC	3 cut(s)	617, 735, 1134
BplI	GAGNNNNNCTC	2 cut(s)	1022, 1054
BpmI	CTGGAG	1 cut(s)	333
Bpu10I	CCTNAGC	2 cut(s)	1345, 2135
Bpu14I	TTCGAA	3 cut(s)	1418, 1597, 1992
BpuEI	CTTGAG	1 cut(s)	368
BpuMI	CCSGG	2 cut(s)	112, 1803
BsaBI	GATNNNNATC	1 cut(s)	1962
BsaJI	CCNNGG	3 cut(s)	1287, 1576, 1802
BsaWI	WCCGGW	2 cut(s)	28, 225
Bsc4I	CCNNNNNNNGG	7 cut(s)	1022, 1462, 1520, 1620, 1802, 1879, 2136
Bse1I	ACTGG	5 cut(s)	593, 707, 1128, 1153, 2005
Bse21I	CCTNAGG	2 cut(s)	737, 752
Bse3DI	GCAATG	2 cut(s)	469, 564
Bse8I	GATNNNNATC	1 cut(s)	1962
BseAI	TCCGGA	1 cut(s)	28
BseBI	CCWGG	2 cut(s)	1480, 2131
BseDI	CCNNGG	3 cut(s)	1287, 1576, 1802
BseGI	GGATG	4 cut(s)	646, 787, 959, 1281
BseJI	GATNNNNATC	1 cut(s)	1962
BseLI	CCNNNNNNNGG	7 cut(s)	1022, 1462, 1520, 1620, 1802, 1879, 2136
BseMI	GCAATG	2 cut(s)	469, 564
BseMII	CTCAG	6 cut(s)	138, 605, 1325, 1359, 1946, 2149
BseNI	ACTGG	5 cut(s)	593, 707, 1128, 1153, 2005
BseRI	GAGGAG	3 cut(s)	336, 386, 2108
BseXI	GCAGC	8 cut(s)	332, 660, 751, 790, 1390, 1441, 1717, 1739
BsiHKCI	CYCGRG	1 cut(s)	1540
BsiSI	CCGG	7 cut(s)	29, 112, 226, 1647, 1779, 1792, 1802
BsiWI	CGTACG	1 cut(s)	1507
BslFI	GGGAC	2 cut(s)	173, 2017
BslI	CCNNNNNNNGG	7 cut(s)	1022, 1462, 1520, 1620, 1802, 1879, 2136
BsmAI	GTCTC	3 cut(s)	533, 1637, 1709
BsmBI	CGTCTC	1 cut(s)	1709
BsmFI	GGGAC	2 cut(s)	173, 2017
BsmI	GAATGC	1 cut(s)	235
BsoBI	CYCGRG	1 cut(s)	1540
Bsp119I	TTCGAA	3 cut(s)	1418, 1597, 1992
Bsp1286I	GDGCHC	2 cut(s)	405, 502
Bsp13I	TCCGGA	1 cut(s)	28
Bsp1407I	TGTACA	1 cut(s)	828
Bsp143I	GATC	6 cut(s)	469, 610, 1092, 1458, 1673, 1957
BspACI	CCGC	7 cut(s)	1016, 1624, 1642, 1758, 1761, 1782, 1916
BspCNI	CTCAG	6 cut(s)	139, 606, 1324, 1358, 1945, 2148
BspEI	TCCGGA	1 cut(s)	28
BspLI	GGNNCC	3 cut(s)	1514, 1525, 2080
BspMI	ACCTGC	2 cut(s)	224, 1677
BspPI	GGATC	1 cut(s)	1965
BspT104I	TTCGAA	3 cut(s)	1418, 1597, 1992
BsrDI	GCAATG	2 cut(s)	469, 564
BsrGI	TGTACA	1 cut(s)	828
BsrI	ACTGG	5 cut(s)	593, 707, 1128, 1153, 2005
BssECI	CCNNGG	3 cut(s)	1287, 1576, 1802
BssMI	GATC	6 cut(s)	469, 610, 1092, 1458, 1673, 1957
BssSI	CACGAG	1 cut(s)	1383
BssT1I	CCWWGG	1 cut(s)	1287
Bst2BI	CACGAG	1 cut(s)	1383
Bst2UI	CCWGG	2 cut(s)	1480, 2131
Bst4CI	ACNGT	2 cut(s)	63, 1447
Bst6I	CTCTTC	1 cut(s)	970
BstAUI	TGTACA	1 cut(s)	828
BstBI	TTCGAA	3 cut(s)	1418, 1597, 1992
BstC8I	GCNNGC	6 cut(s)	211, 562, 678, 1206, 1644, 1725
BstDSI	CCRYGG	1 cut(s)	1576
BstENI	CCTNNNNNAGG	1 cut(s)	2134
BstF5I	GGATG	4 cut(s)	646, 787, 959, 1281
BstH2I	RGCGCY	1 cut(s)	1630
BstHHI	GCGC	2 cut(s)	1629, 2017
BstKTI	GATC	6 cut(s)	472, 613, 1095, 1461, 1676, 1960
BstMAI	GTCTC	3 cut(s)	533, 1637, 1709
BstMBI	GATC	6 cut(s)	469, 610, 1092, 1458, 1673, 1957
BstMWI	GCNNNNNNNGC	7 cut(s)	136, 497, 566, 673, 932, 1114, 1181
BstNI	CCWGG	2 cut(s)	1480, 2131
BstNSI	RCATGY	6 cut(s)	201, 395, 680, 1184, 1687, 1889
BstSCI	CCNGG	4 cut(s)	110, 1478, 1801, 2129
BstSFI	CTRYAG	1 cut(s)	192
BstV1I	GCAGC	8 cut(s)	332, 660, 751, 790, 1390, 1441, 1717, 1739
BstV2I	GAAGAC	3 cut(s)	617, 735, 1134
BstX2I	RGATCY	2 cut(s)	610, 1458
BstYI	RGATCY	2 cut(s)	610, 1458
Bsu36I	CCTNAGG	2 cut(s)	737, 752
BtgI	CCRYGG	1 cut(s)	1576
BtsCI	GGATG	4 cut(s)	646, 787, 959, 1281
BtsIMutI	CAGTG	3 cut(s)	586, 714, 1452
BveI	ACCTGC	2 cut(s)	224, 1677
Cac8I	GCNNGC	6 cut(s)	211, 562, 678, 1206, 1644, 1725
CfoI	GCGC	2 cut(s)	1629, 2017
Cfr13I	GGNCC	6 cut(s)	109, 181, 1512, 1644, 1928, 2078
Csp6I	GTAC	3 cut(s)	59, 829, 1508
CspCI	CAANNNNNGTGG	2 cut(s)	36, 71
CviQI	GTAC	3 cut(s)	59, 829, 1508
DpnI	GATC	6 cut(s)	471, 612, 1094, 1460, 1675, 1959
DpnII	GATC	6 cut(s)	469, 610, 1092, 1458, 1673, 1957
EaeI	YGGCCR	3 cut(s)	1549, 1783, 1793
Eam1104I	CTCTTC	1 cut(s)	970
EarI	CTCTTC	1 cut(s)	970
Eco130I	CCWWGG	1 cut(s)	1287
Eco147I	AGGCCT	2 cut(s)	1987, 2140
Eco24I	GRGCYC	2 cut(s)	405, 502
Eco47I	GGWCC	2 cut(s)	181, 1928
Eco57I	CTGAAG	3 cut(s)	360, 1005, 1920
Eco81I	CCTNAGG	2 cut(s)	737, 752
Eco88I	CYCGRG	1 cut(s)	1540
EcoNI	CCTNNNNNAGG	1 cut(s)	2134
EcoRII	CCWGG	2 cut(s)	1478, 2129
EcoT14I	CCWWGG	1 cut(s)	1287
EcoT22I	ATGCAT	1 cut(s)	1186
EcoT38I	GRGCYC	2 cut(s)	405, 502
ErhI	CCWWGG	1 cut(s)	1287
Esp3I	CGTCTC	1 cut(s)	1709
FalI	AAGNNNNNCTT	2 cut(s)	288, 320
FaqI	GGGAC	2 cut(s)	173, 2017
FauI	CCCGC	1 cut(s)	1635
FokI	GGATG	4 cut(s)	653, 794, 946, 1288
FriOI	GRGCYC	2 cut(s)	405, 502
GlaI	GCGC	2 cut(s)	1628, 2016
GsuI	CTGGAG	1 cut(s)	333
HaeII	RGCGCY	1 cut(s)	1630
HapII	CCGG	7 cut(s)	29, 112, 226, 1647, 1779, 1792, 1802
HhaI	GCGC	2 cut(s)	1629, 2017
Hin6I	GCGC	2 cut(s)	1627, 2015
HinP1I	GCGC	2 cut(s)	1627, 2015
HincII	GTYRAC	1 cut(s)	1364
HindII	GTYRAC	1 cut(s)	1364
HindIII	AAGCTT	2 cut(s)	355, 482
HpaII	CCGG	7 cut(s)	29, 112, 226, 1647, 1779, 1792, 1802
HphI	GGTGA	5 cut(s)	1057, 1275, 1478, 1547, 1564
Hpy166II	GTNNAC	5 cut(s)	620, 831, 1297, 1337, 1364
Hpy188I	TCNGA	7 cut(s)	241, 615, 640, 704, 717, 1042, 1314
Hpy8I	GTNNAC	5 cut(s)	620, 831, 1297, 1337, 1364
Hpy99I	CGWCG	1 cut(s)	1490
HpyAV	CCTTC	7 cut(s)	259, 529, 1029, 1487, 1570, 1604, 2037
HpyCH4III	ACNGT	2 cut(s)	63, 1447
HpyCH4IV	ACGT	3 cut(s)	622, 1360, 1485
HpyF10VI	GCNNNNNNNGC	7 cut(s)	136, 497, 566, 673, 932, 1114, 1181
HpySE526I	ACGT	3 cut(s)	622, 1360, 1485
HspAI	GCGC	2 cut(s)	1627, 2015
Kpn2I	TCCGGA	1 cut(s)	28
Kzo9I	GATC	6 cut(s)	469, 610, 1092, 1458, 1673, 1957
LmnI	GCTCC	3 cut(s)	349, 1607, 1873
Lsp1109I	GCAGC	8 cut(s)	332, 660, 751, 790, 1390, 1441, 1717, 1739
LweI	GCATC	3 cut(s)	307, 772, 1126
MaeII	ACGT	3 cut(s)	622, 1360, 1485
MaeIII	GTNAC	8 cut(s)	387, 871, 1051, 1155, 1466, 1535, 1807, 2057
MalI	GATC	6 cut(s)	471, 612, 1094, 1460, 1675, 1959
MboI	GATC	6 cut(s)	469, 610, 1092, 1458, 1673, 1957
MfeI	CAATTG	3 cut(s)	288, 629, 1967
MflI	RGATCY	2 cut(s)	610, 1458
MhlI	GDGCHC	2 cut(s)	405, 502
MlyI	GAGTC	3 cut(s)	158, 629, 1532
Mph1103I	ATGCAT	1 cut(s)	1186
MroI	TCCGGA	1 cut(s)	28
MroXI	GAANNNNTTC	5 cut(s)	624, 730, 925, 1174, 1825
MseI	TTAA	5 cut(s)	35, 312, 594, 1845, 1908
MspA1I	CMGCKG	3 cut(s)	178, 560, 1730
MspI	CCGG	7 cut(s)	29, 112, 226, 1647, 1779, 1792, 1802
MspR9I	CCNGG	4 cut(s)	112, 1480, 1803, 2131
MunI	CAATTG	3 cut(s)	288, 629, 1967
Mva1269I	GAATGC	1 cut(s)	235
MvaI	CCWGG	2 cut(s)	1480, 2131
MwoI	GCNNNNNNNGC	7 cut(s)	136, 497, 566, 673, 932, 1114, 1181
NciI	CCSGG	2 cut(s)	112, 1803
NdeII	GATC	6 cut(s)	469, 610, 1092, 1458, 1673, 1957
NlaIV	GGNNCC	3 cut(s)	1514, 1525, 2080
NmeAIII	GCCGAG	1 cut(s)	1454
NmuCI	GTSAC	4 cut(s)	387, 1466, 1535, 1807
NsiI	ATGCAT	1 cut(s)	1186
NspI	RCATGY	6 cut(s)	201, 395, 680, 1184, 1687, 1889
NspV	TTCGAA	3 cut(s)	1418, 1597, 1992
PaeI	GCATGC	1 cut(s)	680
PaeR7I	CTCGAG	1 cut(s)	1540
PceI	AGGCCT	2 cut(s)	1987, 2140
PciI	ACATGT	2 cut(s)	391, 1885
PcsI	WCGNNNNNNNCGW	1 cut(s)	1603
PctI	GAATGC	1 cut(s)	235
PdmI	GAANNNNTTC	5 cut(s)	624, 730, 925, 1174, 1825
PfeI	GAWTC	8 cut(s)	712, 718, 1001, 1354, 1379, 1415, 1839, 1856
Pfl23II	CGTACG	1 cut(s)	1507
PflMI	CCANNNNNTGG	1 cut(s)	1462
PleI	GAGTC	3 cut(s)	157, 629, 1532
PpsI	GAGTC	3 cut(s)	157, 629, 1532
PscI	ACATGT	2 cut(s)	391, 1885
PsiI	TTATAA	1 cut(s)	1080
Psp6I	CCWGG	2 cut(s)	1478, 2129
PspGI	CCWGG	2 cut(s)	1478, 2129
PspLI	CGTACG	1 cut(s)	1507
PspN4I	GGNNCC	3 cut(s)	1514, 1525, 2080
PspPI	GGNCC	6 cut(s)	109, 181, 1512, 1644, 1928, 2078
PspXI	VCTCGAGB	1 cut(s)	1540
PsuI	RGATCY	2 cut(s)	610, 1458
PvuII	CAGCTG	3 cut(s)	178, 560, 1730
RsaI	GTAC	3 cut(s)	60, 830, 1509
RsaNI	GTAC	3 cut(s)	59, 829, 1508
SaqAI	TTAA	5 cut(s)	35, 312, 594, 1845, 1908
Sau3AI	GATC	6 cut(s)	469, 610, 1092, 1458, 1673, 1957
Sau96I	GGNCC	6 cut(s)	109, 181, 1512, 1644, 1928, 2078
SchI	GAGTC	3 cut(s)	158, 629, 1532
ScrFI	CCNGG	4 cut(s)	112, 1480, 1803, 2131
SduI	GDGCHC	2 cut(s)	405, 502
SfaNI	GCATC	3 cut(s)	307, 772, 1126
SfcI	CTRYAG	1 cut(s)	192
Sfr274I	CTCGAG	1 cut(s)	1540
SfuI	TTCGAA	3 cut(s)	1418, 1597, 1992
SinI	GGWCC	2 cut(s)	181, 1928
SlaI	CTCGAG	1 cut(s)	1540
SmlI	CTYRAG	2 cut(s)	383, 1540
SmoI	CTYRAG	2 cut(s)	383, 1540
SpeI	ACTAGT	1 cut(s)	1366
SphI	GCATGC	1 cut(s)	680
SseBI	AGGCCT	2 cut(s)	1987, 2140
SsiI	CCGC	7 cut(s)	1016, 1624, 1642, 1758, 1761, 1782, 1916
StuI	AGGCCT	2 cut(s)	1987, 2140
StyD4I	CCNGG	4 cut(s)	110, 1478, 1801, 2129
StyI	CCWWGG	1 cut(s)	1287
TaaI	ACNGT	2 cut(s)	63, 1447
TaiI	ACGT	3 cut(s)	625, 1363, 1488
TaqI	TCGA	8 cut(s)	405, 1068, 1168, 1418, 1541, 1597, 1992, 2034
TatI	WGTACW	1 cut(s)	828
TauI	GCSGC	6 cut(s)	1018, 1627, 1761, 1764, 1785, 1918
TfiI	GAWTC	8 cut(s)	712, 718, 1001, 1354, 1379, 1415, 1839, 1856
Tru1I	TTAA	5 cut(s)	35, 312, 594, 1845, 1908
Tru9I	TTAA	5 cut(s)	35, 312, 594, 1845, 1908
TscAI	CASTG	3 cut(s)	593, 714, 1452
TseFI	GTSAC	4 cut(s)	387, 1466, 1535, 1807
TseI	GCWGC	8 cut(s)	320, 673, 764, 803, 1403, 1429, 1727, 1730
Tsp45I	GTSAC	4 cut(s)	387, 1466, 1535, 1807
TspDTI	ATGAA	5 cut(s)	612, 657, 935, 982, 1848
TspGWI	ACGGA	3 cut(s)	432, 874, 1593
TspRI	CASTG	3 cut(s)	593, 714, 1452
Van91I	CCANNNNNTGG	1 cut(s)	1462
VpaK11BI	GGWCC	2 cut(s)	181, 1928
XagI	CCTNNNNNAGG	1 cut(s)	2134
XapI	RAATTY	5 cut(s)	171, 545, 840, 900, 2109
XbaI	TCTAGA	1 cut(s)	1937
XceI	RCATGY	6 cut(s)	201, 395, 680, 1184, 1687, 1889
XhoI	CTCGAG	1 cut(s)	1540
XmnI	GAANNNNTTC	5 cut(s)	624, 730, 925, 1174, 1825
Zsp2I	ATGCAT	1 cut(s)	1186

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.