Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0002324

Physical Location & Seq

Genomic Coordinates Forward (+)

15540977 .. 15546887

Gene Structure 5911 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG166700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1722 bp

ATGCGAGGTGCTGAATCAAAGCAAGTCTGCCCACAAATTCAGCTGGTCCAAGTCCCAGTAGCACGGGGTAAAGCTGACCTGAACTCATACTGGAGTGCAGGTTCAGAGGTGGTTTCTATTCTATCAAGGAAGGGTCGATGCGAAAGGGCTTCAATTGACGAAGTGTATCTTGACCTTACTGATGCAGCAGAGACCATGTTAGCTGAAGCTCCTCCAGAAAGGTTGGAAGCGATTGAGGAGGAAGCTCTCAAGTCACATGTTTTGGGGCTTGATAACGAGGACAGAAGTGAAGCCAAAGAAAATGTGAGGAGATTGCTCTGCAAAAGCAATGCTGATCGCCGTGATAAGCTGCTAGCTTGTGGGGCTCTCATTGTTGCAGAACTTGGATTGCTAGTGTTGAAGGAGACAGAATTTACTTGTTCAGCTGGCATTGCTCATAATAAGATGCTGGCCAAACTTGCAAGTGGTATGAATAAACCCGCACAACAAACTGTTGTGCCATTGTCATCTGTGAAAGGATTGCTAGAGTCCTTGCCGATTAGGAAAATGAAACAGCTTGGAGGAGAGCTGGGGAGTAGTTTACAAAGTGATCTGGGTGTTAACACTGTTGGAGATTTATTGCAGTTTTCAGAGGAAAAGCTACAAGAACACTATGGAATCAATACTGGGGGGATAAGTGGGGAAGAAGTTGAGGGGCGCCTTCTTCCGAAGAGCTATGGTCCTGGGAAGACATTTCCTGGACCTCAGGCTTTGAAGACGATTTCTTCTTTAACTAAAATCCAAGGAAGTCAAAATAACCAATGGGGAATAACATCCCTCTTTGTTTCAGCAAGTAAAATTGTTCCCTTACCATCAGGAACAGCTTCAATCACAAAATACTTTCATGGTCAACAGCCATCCTCTTCCAGAAAGCAATCACAGGATAATCTCATAGAAGAATCTTCTCCCCTGCCACCTTCAGGTAATGAGAACTACTCGGAGGTGAATGTAACTACGCCACAAATCGAGTTCCCTTATAAAGAAACTAGGATCAAGTATGCTGTGCCTAGTTTGCATCAACTGGAAGACAAAAAGGATTTGCTGAATGAGCAGAATCCATGTTGCTCTCCAAAAAATCCAAAAAATCAGGCACAGGATGATTTCACCCAAGGAAGTTTACTATCGTCAATCTCAGGGACTGAACTCTGCTTAGGAGAGAATCAAGGTCAACTAATAAAAAATGATTCTCGTGAAGAACCTTGCCTTAAAGCTGCAATGCCTGGTTTCAATAGACAGGAGCAGAAAAGGAAAACAGTGAAAGTCAAGGGAACATCTTCAATATTGAGATTCTTTAAGAACCAAGATCCATCTTGTGCACCCCGAAAGCTGGAACATGTTGAAAATACTGAAGATATTAGACTGCCACTATCTGTTGGCCCTCAGTCTAGAAGTAATAGTTCTTTGGATCACAATCAATCTGAGTTGTCAAAAGAAAGGCCTTTTGAAGAAACTGGGACTTCTAGTGCGCCTAGTTCAGCCCAATTTGAACAAAGAAGGGGAGTATGGAGTTACAATACTGACGAGATTGACCCCTCTGTCATTGATGAGTTACCACCCGAAATTGAAGAAGAAGTTCGTGCCTGGCTCAGGCCTCACAAGCGGCAAAATGTAGTGAAACGGGGTTCTAGTATTGCCGATTATTTCTTACCCACAAGGAATGCAGTCTATGACATTCTTCTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000731 GO:0003674 GO:0003676 GO:0003677 GO:0003684 GO:0003824 GO:0003887 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006139 GO:0006259 GO:0006281 GO:0006282 GO:0006301 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009650 GO:0009987 GO:0010224 GO:0010225 GO:0016740 GO:0016772 GO:0016779 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019985 GO:0031323 GO:0031974 GO:0031981 GO:0033554 GO:0034061 GO:0034641 GO:0034645 GO:0034654 GO:0042276 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051171 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0070987 GO:0071704 GO:0071897 GO:0080090 GO:0080134 GO:0080135 GO:0090304 GO:0097159 GO:0140097 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:2001020

KEGG Pathways

Metabolic & Signaling

ko01524 ko03460 map01524 map03460

Pfam Domains

Protein Families

IMS IMS_C

Protein Analysis

573

Amino Acids

63.12

Weight (kDa)

5.84

Isoelectric Point (pI)

59.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IMS	PF00817	1 - 155	1.4e-16	impB/mucB/samB family
POLH-Rev1_HhH	PF21704	178 - 223	4.3e-15	DNApol eta/Rev1, HhH motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002324)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G44740 AT5G44740 AT5G44740
fragaria_vesca	FvH4_3g13010 FvH4_3g13010 FvH4_3g13010 FvH4_3g13010
malus_domestica	MD10G1227100.v1.1 MD10G1227200.v1.1
prunus_persica	Prupe.4G118000_v2.0.a1 Prupe.4G118000_v2.0.a1 Prupe.4G118000_v2.0.a1
pyrus_communis	pycom10g19090
rosa_chinensis	RchiOBHm_Chr4g0406911 RchiOBHm_Chr4g0406921 RchiOBHm_Chr5g0021111 RchiOBHm_Chr5g0021121 RchiOBHm_Chr5g0021171 RchiOBHm_Chr5g0021201
rosa_laevigata	RLG00000032590 RLG00000032594
rosa_multiflora	Rmu_sc0002467.1_g000007 Rmu_sc0002467.1_g000009 Rmu_sc0002467.1_g000013 Rmu_sc0002467.1_g000015 Rmu_sc0012431.1_g000002
rosa_roxburghii	Rroxscaffold_1G00057300 Rroxscaffold_1G00057320 Rroxscaffold_1G00057330 Rroxscaffold_5G00351670
rosa_rugosa	Rorug05G0064800 Rorug05G0065100 Rorug05G0065100
rosa_samantha	Rh5AG154000 Rh5BG153700 Rh5CG166700 Rh5CG167300 Rh5DG154100
rosa_wichuraiana	Rw1G022470 Rw5G013690 Rw5G013710 Rw5G013730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1017
AasI	GACNNNNNNGTC	1 cut(s)	1574
Acc36I	ACCTGC	1 cut(s)	89
AccB1I	GGYRCC	1 cut(s)	696
AciI	CCGC	2 cut(s)	480, 1639
AclWI	GGATC	3 cut(s)	1037, 1337, 1452
AcoI	YGGCCR	1 cut(s)	450
AcsI	RAATTY	2 cut(s)	36, 410
AcuI	CTGAAG	3 cut(s)	225, 942, 1407
AcyI	GRCGYC	1 cut(s)	697
AfiI	CCNNNNNNNGG	3 cut(s)	959, 1366, 1626
AflIII	ACRYGT	2 cut(s)	256, 1372
AjnI	CCWGG	4 cut(s)	721, 736, 1258, 1619
AloI	GAACNNNNNNTCC	2 cut(s)	85, 117
Alw21I	GWGCWC	1 cut(s)	1357
Alw26I	GTCTC	2 cut(s)	185, 398
Alw44I	GTGCAC	1 cut(s)	1353
AlwI	GGATC	3 cut(s)	1037, 1337, 1452
AlwNI	CAGNNNCTG	1 cut(s)	1178
AoxI	GGCC	4 cut(s)	450, 1414, 1475, 1628
ApaLI	GTGCAC	1 cut(s)	1353
ApeKI	GCWGC	3 cut(s)	185, 349, 1250
ApoI	RAATTY	2 cut(s)	36, 410
Asp700I	GAANNNNTTC	3 cut(s)	862, 1312, 1611
AspLEI	GCGC	2 cut(s)	699, 1507
AspS9I	GGNCC	4 cut(s)	46, 719, 740, 1415
AsuHPI	GGTGA	2 cut(s)	994, 1135
AsuNHI	GCTAGC	1 cut(s)	352
AvaII	GGWCC	3 cut(s)	46, 719, 740
AxyI	CCTNAGG	1 cut(s)	744
BaeGI	GKGCMC	1 cut(s)	1357
BalI	TGGCCA	1 cut(s)	452
BanI	GGYRCC	1 cut(s)	696
BanII	GRGCYC	1 cut(s)	367
BauI	CACGAG	1 cut(s)	1227
BbsI	GAAGAC	3 cut(s)	734, 761, 1071
Bbv12I	GWGCWC	1 cut(s)	1357
BbvI	GCAGC	3 cut(s)	197, 336, 1237
BccI	CCATC	3 cut(s)	859, 904, 1354
BceAI	ACGGC	1 cut(s)	324
BciT130I	CCWGG	4 cut(s)	723, 738, 1260, 1621
BcoDI	GTCTC	2 cut(s)	185, 398
BfaI	CTAG	9 cut(s)	353, 392, 524, 1026, 1047, 1425, 1500, 1509, 1665
BfoI	RGCGCY	1 cut(s)	700
BfuAI	ACCTGC	1 cut(s)	89
BisI	GCNGC	4 cut(s)	186, 350, 1251, 1640
BlsI	GCNGC	4 cut(s)	187, 351, 1252, 1641
Bme1390I	CCNGG	4 cut(s)	723, 738, 1260, 1621
Bme18I	GGWCC	3 cut(s)	46, 719, 740
BmgT120I	GGNCC	4 cut(s)	46, 719, 740, 1415
BmiI	GGNNCC	1 cut(s)	698
BmrFI	CCNGG	4 cut(s)	723, 738, 1260, 1621
BmrI	ACTGGG	3 cut(s)	50, 675, 1500
BmsI	GCATC	4 cut(s)	128, 172, 435, 1063
BmtI	GCTAGC	1 cut(s)	356
BmuI	ACTGGG	3 cut(s)	50, 675, 1500
BpiI	GAAGAC	3 cut(s)	734, 761, 1071
BplI	GAGNNNNNCTC	2 cut(s)	959, 991
BpmI	CTGGAG	2 cut(s)	112, 198
Bpu10I	CCTNAGC	2 cut(s)	1189, 1625
BpuEI	CTTGAG	1 cut(s)	233
BsaBI	GATNNNNATC	1 cut(s)	1449
BsaHI	GRCGYC	1 cut(s)	697
BsaI	GGTCTC	1 cut(s)	185
BsaJI	CCNNGG	3 cut(s)	722, 781, 1147
BsaXI	ACNNNNNCTCC	2 cut(s)	85, 115
Bsc4I	CCNNNNNNNGG	3 cut(s)	959, 1366, 1626
Bse1I	ACTGG	5 cut(s)	56, 95, 670, 1065, 1495
Bse21I	CCTNAGG	1 cut(s)	744
Bse3DI	GCAATG	3 cut(s)	334, 429, 1260
Bse8I	GATNNNNATC	1 cut(s)	1449
BseBI	CCWGG	4 cut(s)	723, 738, 1260, 1621
BseDI	CCNNGG	3 cut(s)	722, 781, 1147
BseGI	GGATG	3 cut(s)	812, 896, 1141
BseJI	GATNNNNATC	1 cut(s)	1449
BseLI	CCNNNNNNNGG	3 cut(s)	959, 1366, 1626
BseMI	GCAATG	3 cut(s)	334, 429, 1260
BseMII	CTCAG	5 cut(s)	758, 1185, 1433, 1449, 1639
BseNI	ACTGG	5 cut(s)	56, 95, 670, 1065, 1495
BseRI	GAGGAG	4 cut(s)	201, 251, 322, 576
BseSI	GKGCMC	1 cut(s)	1357
BseXI	GCAGC	3 cut(s)	197, 336, 1237
BseYI	CCCAGC	1 cut(s)	568
BsgI	GTGCAG	1 cut(s)	117
BshFI	GGCC	4 cut(s)	452, 1416, 1477, 1630
BshNI	GGYRCC	1 cut(s)	696
BsiHKAI	GWGCWC	1 cut(s)	1357
BslFI	GGGAC	3 cut(s)	38, 1189, 1507
BslI	CCNNNNNNNGG	3 cut(s)	959, 1366, 1626
BsmAI	GTCTC	2 cut(s)	185, 398
BsmFI	GGGAC	3 cut(s)	38, 1189, 1507
BsmI	GAATGC	1 cut(s)	1702
BsnI	GGCC	4 cut(s)	452, 1416, 1477, 1630
Bso31I	GGTCTC	1 cut(s)	185
Bsp1286I	GDGCHC	2 cut(s)	367, 1357
Bsp143I	GATC	5 cut(s)	334, 589, 1029, 1342, 1444
BspACI	CCGC	2 cut(s)	480, 1639
BspANI	GGCC	4 cut(s)	452, 1416, 1477, 1630
BspCNI	CTCAG	5 cut(s)	757, 1184, 1432, 1450, 1638
BspLI	GGNNCC	1 cut(s)	698
BspMI	ACCTGC	1 cut(s)	89
BspOI	GCTAGC	1 cut(s)	356
BspPI	GGATC	3 cut(s)	1037, 1337, 1452
BspQI	GCTCTTC	1 cut(s)	704
BspT107I	GGYRCC	1 cut(s)	696
BspTNI	GGTCTC	1 cut(s)	185
BsrDI	GCAATG	3 cut(s)	334, 429, 1260
BsrI	ACTGG	5 cut(s)	56, 95, 670, 1065, 1495
BssECI	CCNNGG	3 cut(s)	722, 781, 1147
BssMI	GATC	5 cut(s)	334, 589, 1029, 1342, 1444
BssNI	GRCGYC	1 cut(s)	697
BssSI	CACGAG	1 cut(s)	1227
BssT1I	CCWWGG	2 cut(s)	781, 1147
Bst2BI	CACGAG	1 cut(s)	1227
Bst2UI	CCWGG	4 cut(s)	723, 738, 1260, 1621
Bst4CI	ACNGT	3 cut(s)	493, 607, 1294
Bst6I	CTCTTC	2 cut(s)	704, 907
BstACI	GRCGYC	1 cut(s)	697
BstC8I	GCNNGC	3 cut(s)	354, 427, 450
BstDEI	CTNAG	6 cut(s)	744, 1171, 1189, 1419, 1458, 1625
BstENI	CCTNNNNNAGG	1 cut(s)	1624
BstF5I	GGATG	3 cut(s)	812, 896, 1141
BstH2I	RGCGCY	1 cut(s)	700
BstHHI	GCGC	2 cut(s)	699, 1507
BstKTI	GATC	5 cut(s)	337, 592, 1032, 1345, 1447
BstMAI	GTCTC	2 cut(s)	185, 398
BstMBI	GATC	5 cut(s)	334, 589, 1029, 1342, 1444
BstMWI	GCNNNNNNNGC	6 cut(s)	362, 431, 458, 1051, 1087, 1636
BstNI	CCWGG	4 cut(s)	723, 738, 1260, 1621
BstNSI	RCATGY	2 cut(s)	260, 1376
BstSCI	CCNGG	4 cut(s)	721, 736, 1258, 1619
BstSLI	GKGCMC	1 cut(s)	1357
BstV1I	GCAGC	3 cut(s)	197, 336, 1237
BstV2I	GAAGAC	3 cut(s)	734, 761, 1071
BstX2I	RGATCY	1 cut(s)	1342
BstYI	RGATCY	1 cut(s)	1342
Bsu36I	CCTNAGG	1 cut(s)	744
BsuRI	GGCC	4 cut(s)	452, 1416, 1477, 1630
BtsCI	GGATG	3 cut(s)	812, 896, 1141
BtsIMutI	CAGTG	2 cut(s)	603, 1299
BveI	ACCTGC	1 cut(s)	89
Cac8I	GCNNGC	3 cut(s)	354, 427, 450
CaiI	CAGNNNCTG	1 cut(s)	1178
CfoI	GCGC	2 cut(s)	699, 1507
Cfr13I	GGNCC	4 cut(s)	46, 719, 740, 1415
CviAII	CATG	5 cut(s)	196, 257, 884, 1098, 1373
DdeI	CTNAG	6 cut(s)	744, 1171, 1189, 1419, 1458, 1625
DinI	GGCGCC	1 cut(s)	698
DpnI	GATC	5 cut(s)	336, 591, 1031, 1344, 1446
DpnII	GATC	5 cut(s)	334, 589, 1029, 1342, 1444
DrdI	GACNNNNNNGTC	1 cut(s)	1574
DseDI	GACNNNNNNGTC	1 cut(s)	1574
EaeI	YGGCCR	1 cut(s)	450
Eam1104I	CTCTTC	2 cut(s)	704, 907
EarI	CTCTTC	2 cut(s)	704, 907
Eco130I	CCWWGG	2 cut(s)	781, 1147
Eco147I	AGGCCT	2 cut(s)	1477, 1630
Eco24I	GRGCYC	1 cut(s)	367
Eco31I	GGTCTC	1 cut(s)	185
Eco47I	GGWCC	3 cut(s)	46, 719, 740
Eco57I	CTGAAG	3 cut(s)	225, 942, 1407
Eco81I	CCTNAGG	1 cut(s)	744
EcoNI	CCTNNNNNAGG	1 cut(s)	1624
EcoRII	CCWGG	4 cut(s)	721, 736, 1258, 1619
EcoT14I	CCWWGG	2 cut(s)	781, 1147
EcoT38I	GRGCYC	1 cut(s)	367
EgeI	GGCGCC	1 cut(s)	698
EheI	GGCGCC	1 cut(s)	698
ErhI	CCWWGG	2 cut(s)	781, 1147
FaeI	CATG	5 cut(s)	199, 260, 887, 1101, 1376
FalI	AAGNNNNNCTT	2 cut(s)	153, 185
FaqI	GGGAC	3 cut(s)	38, 1189, 1507
FatI	CATG	5 cut(s)	195, 256, 883, 1097, 1372
FauI	CCCGC	1 cut(s)	487
Fnu4HI	GCNGC	4 cut(s)	186, 350, 1251, 1640
FokI	GGATG	3 cut(s)	799, 883, 1148
FriOI	GRGCYC	1 cut(s)	367
Fsp4HI	GCNGC	4 cut(s)	186, 350, 1251, 1640
FspBI	CTAG	9 cut(s)	353, 392, 524, 1026, 1047, 1425, 1500, 1509, 1665
GlaI	GCGC	2 cut(s)	698, 1506
GluI	GCNGC	4 cut(s)	186, 350, 1251, 1640
GsaI	CCCAGC	1 cut(s)	572
GsuI	CTGGAG	2 cut(s)	112, 198
HaeII	RGCGCY	1 cut(s)	700
HaeIII	GGCC	4 cut(s)	452, 1416, 1477, 1630
HhaI	GCGC	2 cut(s)	699, 1507
Hin1I	GRCGYC	1 cut(s)	697
Hin1II	CATG	5 cut(s)	199, 260, 887, 1101, 1376
Hin6I	GCGC	2 cut(s)	697, 1505
HinP1I	GCGC	2 cut(s)	697, 1505
HincII	GTYRAC	3 cut(s)	601, 890, 1208
HindII	GTYRAC	3 cut(s)	601, 890, 1208
HinfI	GANTC	8 cut(s)	14, 527, 657, 938, 1093, 1198, 1223, 1326
HpaI	GTTAAC	1 cut(s)	601
HphI	GGTGA	2 cut(s)	994, 1135
Hpy166II	GTNNAC	6 cut(s)	581, 601, 890, 1157, 1208, 1355
Hpy188I	TCNGA	5 cut(s)	106, 631, 708, 979, 1459
Hpy188III	TCNNGA	6 cut(s)	170, 215, 855, 906, 1229, 1425
Hpy8I	GTNNAC	6 cut(s)	581, 601, 890, 1157, 1208, 1355
HpyAV	CCTTC	5 cut(s)	124, 394, 710, 966, 1527
HpyCH4III	ACNGT	3 cut(s)	493, 607, 1294
HpyF10VI	GCNNNNNNNGC	6 cut(s)	362, 431, 458, 1051, 1087, 1636
HpyF3I	CTNAG	6 cut(s)	744, 1171, 1189, 1419, 1458, 1625
Hsp92I	GRCGYC	1 cut(s)	697
Hsp92II	CATG	5 cut(s)	199, 260, 887, 1101, 1376
HspAI	GCGC	2 cut(s)	697, 1505
KasI	GGCGCC	1 cut(s)	696
KspAI	GTTAAC	1 cut(s)	601
Kzo9I	GATC	5 cut(s)	334, 589, 1029, 1342, 1444
LguI	GCTCTTC	1 cut(s)	704
LmnI	GCTCC	2 cut(s)	214, 1276
Lsp1109I	GCAGC	3 cut(s)	197, 336, 1237
LweI	GCATC	4 cut(s)	128, 172, 435, 1063
MaeI	CTAG	9 cut(s)	353, 392, 524, 1026, 1047, 1425, 1500, 1509, 1665
MaeIII	GTNAC	4 cut(s)	252, 988, 1547, 1587
MalI	GATC	5 cut(s)	336, 591, 1031, 1344, 1446
MboI	GATC	5 cut(s)	334, 589, 1029, 1342, 1444
MfeI	CAATTG	1 cut(s)	153
MflI	RGATCY	1 cut(s)	1342
MhlI	GDGCHC	2 cut(s)	367, 1357
MlsI	TGGCCA	1 cut(s)	452
MluCI	AATT	6 cut(s)	36, 153, 410, 837, 1520, 1599
MluNI	TGGCCA	1 cut(s)	452
Mly113I	GGCGCC	1 cut(s)	697
MlyI	GAGTC	1 cut(s)	536
MmeI	TCCRAC	2 cut(s)	204, 589
Mox20I	TGGCCA	1 cut(s)	452
MroXI	GAANNNNTTC	3 cut(s)	862, 1312, 1611
MscI	TGGCCA	1 cut(s)	452
MseI	TTAA	4 cut(s)	600, 770, 1245, 1332
Msp20I	TGGCCA	1 cut(s)	452
MspA1I	CMGCKG	2 cut(s)	43, 425
MspR9I	CCNGG	4 cut(s)	723, 738, 1260, 1621
MunI	CAATTG	1 cut(s)	153
Mva1269I	GAATGC	1 cut(s)	1702
MvaI	CCWGG	4 cut(s)	723, 738, 1260, 1621
MwoI	GCNNNNNNNGC	6 cut(s)	362, 431, 458, 1051, 1087, 1636
NarI	GGCGCC	1 cut(s)	697
NdeII	GATC	5 cut(s)	334, 589, 1029, 1342, 1444
NheI	GCTAGC	1 cut(s)	352
NlaIII	CATG	5 cut(s)	199, 260, 887, 1101, 1376
NlaIV	GGNNCC	1 cut(s)	698
NmuCI	GTSAC	1 cut(s)	252
NspI	RCATGY	2 cut(s)	260, 1376
PceI	AGGCCT	2 cut(s)	1477, 1630
PciI	ACATGT	2 cut(s)	256, 1372
PciSI	GCTCTTC	1 cut(s)	704
PctI	GAATGC	1 cut(s)	1702
PdmI	GAANNNNTTC	3 cut(s)	862, 1312, 1611
PfeI	GAWTC	7 cut(s)	14, 657, 938, 1093, 1198, 1223, 1326
PfoI	TCCNGGA	1 cut(s)	736
PkrI	GCNGC	4 cut(s)	187, 351, 1252, 1641
PleI	GAGTC	1 cut(s)	535
PluTI	GGCGCC	1 cut(s)	700
PpsI	GAGTC	1 cut(s)	535
PscI	ACATGT	2 cut(s)	256, 1372
PsiI	TTATAA	1 cut(s)	1017
Psp6I	CCWGG	4 cut(s)	721, 736, 1258, 1619
PspFI	CCCAGC	1 cut(s)	568
PspGI	CCWGG	4 cut(s)	721, 736, 1258, 1619
PspN4I	GGNNCC	1 cut(s)	698
PspPI	GGNCC	4 cut(s)	46, 719, 740, 1415
PstNI	CAGNNNCTG	1 cut(s)	1178
PsuI	RGATCY	1 cut(s)	1342
PvuII	CAGCTG	2 cut(s)	43, 425
SapI	GCTCTTC	1 cut(s)	704
SaqAI	TTAA	4 cut(s)	600, 770, 1245, 1332
SatI	GCNGC	4 cut(s)	186, 350, 1251, 1640
Sau3AI	GATC	5 cut(s)	334, 589, 1029, 1342, 1444
Sau96I	GGNCC	4 cut(s)	46, 719, 740, 1415
SchI	GAGTC	1 cut(s)	536
ScrFI	CCNGG	4 cut(s)	723, 738, 1260, 1621
SduI	GDGCHC	2 cut(s)	367, 1357
SfaNI	GCATC	4 cut(s)	128, 172, 435, 1063
SfoI	GGCGCC	1 cut(s)	698
SinI	GGWCC	3 cut(s)	46, 719, 740
SmlI	CTYRAG	1 cut(s)	248
SmoI	CTYRAG	1 cut(s)	248
Sse9I	AATT	6 cut(s)	36, 153, 410, 837, 1520, 1599
SseBI	AGGCCT	2 cut(s)	1477, 1630
SsiI	CCGC	2 cut(s)	480, 1639
SspDI	GGCGCC	1 cut(s)	696
SspI	AATATT	1 cut(s)	1320
SspMI	CTAG	9 cut(s)	353, 392, 524, 1026, 1047, 1425, 1500, 1509, 1665
StuI	AGGCCT	2 cut(s)	1477, 1630
StyD4I	CCNGG	4 cut(s)	721, 736, 1258, 1619
StyI	CCWWGG	2 cut(s)	781, 1147
TaaI	ACNGT	3 cut(s)	493, 607, 1294
TaqI	TCGA	2 cut(s)	136, 1005
TasI	AATT	6 cut(s)	36, 153, 410, 837, 1520, 1599
TauI	GCSGC	1 cut(s)	1642
TfiI	GAWTC	7 cut(s)	14, 657, 938, 1093, 1198, 1223, 1326
Tru1I	TTAA	4 cut(s)	600, 770, 1245, 1332
Tru9I	TTAA	4 cut(s)	600, 770, 1245, 1332
TscAI	CASTG	2 cut(s)	610, 1299
TseFI	GTSAC	1 cut(s)	252
TseI	GCWGC	3 cut(s)	185, 349, 1250
Tsp45I	GTSAC	1 cut(s)	252
TspDTI	ATGAA	3 cut(s)	485, 563, 872
TspRI	CASTG	2 cut(s)	610, 1299
VneI	GTGCAC	1 cut(s)	1353
VpaK11BI	GGWCC	3 cut(s)	46, 719, 740
XagI	CCTNNNNNAGG	1 cut(s)	1624
XapI	RAATTY	2 cut(s)	36, 410
XbaI	TCTAGA	1 cut(s)	1424
XceI	RCATGY	2 cut(s)	260, 1376
XmnI	GAANNNNTTC	3 cut(s)	862, 1312, 1611
XspI	CTAG	9 cut(s)	353, 392, 524, 1026, 1047, 1425, 1500, 1509, 1665

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.