Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0002324

Physical Location & Seq

Genomic Coordinates Forward (+)

16855442 .. 16860094

Gene Structure 4653 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000032590

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2061 bp

ATGCAAACTGAAAGTGTGCTTTACTTTGCAGTGGAGCAAAGGAAAAATCCGGTGTTAAGGGGCTTACCTACGGCTGTGGTACAGTATAACTCATGGCAAGGTGGCGGCTTGATTGCTGTCAGCTATGAGGCCCGGAAATATGGTGTGAAACGGTACATATATGTTCTACTCCTTTTTTTATTTGTAGACAACCGTGTTTTGTTTTTGTTTGAGACAACAATGATGGCATGTTTTGAAGTTCAATGTGAGGTGGTTTCCATTTTATCAAGGAAGGGTCGATGTGAGAGGGCTTCAATTGACGAAGTGTATCTTGACCTTACTGATGCAGCAGAAACCATGTTAGCTGAAGCTCCTCCAGAAAGCTTGGAAGAAATTGAGGAGGAAGCTCTCAAGTTACATGTTTTTGGACTCGATAACGAGATTGGGAACAATGCCTTTGGACATGACGGCTGTGAAGCCAAAGAAAATGTGAGGAAATGGCTTTGCAAAATCACTGCTGATCGTCGTGATAACCTATTAGCTTGTGGGGCTCTCATTGTTGCAAAACTTAGGTTGCCAGTGTTGAAGGAGACAGAATTTACTTGTTCAGCTGGAATTGCTCATAATAAGATGCTGGCTAAACTTGCAAGTGGTATGAACAAACCTGCAAAACAGACTGTTGTGCCGTTATCACCTGTGAAAGGATTGCTAGAGTCCTTGCCAATTAAGAAAATGAAGCAGCTTGGAGGAAAGCTGGGGAGTTCCTTACAAACTGACATGGTGGTTAACACTGTCGGAGATTTATTGCAGTTTTCAGAGGAAAAGCTACAGCAACGCTACGGAATCAATACTGGTACCTGGTTATGGAATATTGCAAGGGGGATAAGTGGGGAAGAAGTTGAGGGGCGCCTTCTTCCGAAGAGCCATGGTTCTGGGAAGACATTTCCTGGACCTCAGGCTTTGAAGACGATTTCTTCTGTTCAACACTGGCTTAATGAACTTTGTGAAGATTTGAGTGAACGTCTTCAATTGGACTTGGATGAAAACAAACGTATCGCTCATACACTAGTGCTGCATGCCAACGCATACAAGGCCAGTGATTCAGATTCACAGAAGAAGTTCCCTTCTAAATCTTGTCCCCTTAGGTATGGGGCTGCCAAGATACAAGAAGATGCTCTTAATCTCTTTCAATCTGCATTACGTGAATACTTGGGTTTATTCACAGCCAAAATCCAAGGAAGTCAAAATAACCAATGGGGAATAACATCCCTCTCTGTTTCAGCAAGTAAAATTGTTCCTATACCATCGATCTTAGCTCCCATTCTCCAGTACTTTGTTTTTGCCAATCATCTCAGTAATAAATTTAGTTACTTTTCCATCAAATTGCTTCACCGGCACATAATAAGCCCTATTGGGAGTGAACACTTCTCAGGAGTGAATCAAAGTCAGCTAATGAAAAATTCTTCTGGTGAAGGCCCTTCTGTTAAATTGGCCATGCCTGGTTTCAGAAGATTGGAGCAGAAAAGGAAAACAGTGAAAAACAAGGGACACAGATGCCTTTTGATCATGTCTTTAATGGCCTTGTTTTTTGGAACCTCTTCAATATTGAGATTTTTTAAGAACCAAGATCCATCTTCCTCTCCTAAAAAGCTAGAACATGTAGAAAATACTGAAGATGCTAAAGCACTGCTATCTGTTGGTAAGTTCAGTGCCGCATCCCCTGCCCCCTCCCTCCTCCGGCTATCTGTTTTTAATGTTAAGAGTTTTTGTACAGGCCCTCAGTCTAGAAGTGATAATTATTTGGATCATAATCAATCTGAGTTGCCAAAAGAAAGGCCTTTCGAAGAAACTGGGACTTCTAGTGCACCTAGTTCATCTCAATTTGAACAAAGAAGGGGAGTATGGAGTTACAATACTGACGAGATTGACCCCTCTGTCATTGATGAGTTACCACCAGAAATTCAACAAGAAGTTCGTGCCTGGCTCAGGCCTCACAAGCGGCAAAATGTAGCGAAACGGGGTTCTAGTATTGCCGATTACTTCTTGGGAGAGGATCCTCTCCTGAGCTCATTCCCCTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000731 GO:0003674 GO:0003676 GO:0003677 GO:0003684 GO:0003824 GO:0003887 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006139 GO:0006259 GO:0006281 GO:0006282 GO:0006301 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009650 GO:0009987 GO:0010224 GO:0010225 GO:0016740 GO:0016772 GO:0016779 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019985 GO:0031323 GO:0031974 GO:0031981 GO:0033554 GO:0034061 GO:0034641 GO:0034645 GO:0034654 GO:0042276 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051171 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0070987 GO:0071704 GO:0071897 GO:0080090 GO:0080134 GO:0080135 GO:0090304 GO:0097159 GO:0140097 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:2001020

KEGG Pathways

Metabolic & Signaling

ko01524 ko03460 map01524 map03460

Pfam Domains

Protein Families

IMS IMS_C

Protein Analysis

687

Amino Acids

76.45

Weight (kDa)

8.72

Isoelectric Point (pI)

54.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IMS	PF00817	8 - 210	6.5e-25	impB/mucB/samB family
POLH-Rev1_HhH	PF21704	233 - 288	1.5e-22	DNApol eta/Rev1, HhH motif
IMS_C	PF11799	299 - 426	5.8e-09	impB/mucB/samB family C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002324)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G44740 AT5G44740 AT5G44740
fragaria_vesca	FvH4_3g13010 FvH4_3g13010 FvH4_3g13010 FvH4_3g13010
malus_domestica	MD10G1227100.v1.1 MD10G1227200.v1.1
prunus_persica	Prupe.4G118000_v2.0.a1 Prupe.4G118000_v2.0.a1 Prupe.4G118000_v2.0.a1
pyrus_communis	pycom10g19090
rosa_chinensis	RchiOBHm_Chr4g0406911 RchiOBHm_Chr4g0406921 RchiOBHm_Chr5g0021111 RchiOBHm_Chr5g0021121 RchiOBHm_Chr5g0021171 RchiOBHm_Chr5g0021201
rosa_laevigata	RLG00000032590 RLG00000032594
rosa_multiflora	Rmu_sc0002467.1_g000007 Rmu_sc0002467.1_g000009 Rmu_sc0002467.1_g000013 Rmu_sc0002467.1_g000015 Rmu_sc0012431.1_g000002
rosa_roxburghii	Rroxscaffold_1G00057300 Rroxscaffold_1G00057320 Rroxscaffold_1G00057330 Rroxscaffold_5G00351670
rosa_rugosa	Rorug05G0064800 Rorug05G0065100 Rorug05G0065100
rosa_samantha	Rh5AG154000 Rh5BG153700 Rh5CG166700 Rh5CG167300 Rh5DG154100
rosa_wichuraiana	Rw1G022470 Rw5G013690 Rw5G013710 Rw5G013730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1913
Acc36I	ACCTGC	1 cut(s)	652
Acc65I	GGTACC	1 cut(s)	833
AccB1I	GGYRCC	2 cut(s)	833, 885
AccI	GTMKAC	1 cut(s)	186
AciI	CCGC	3 cut(s)	105, 1692, 1978
AclWI	GGATC	4 cut(s)	1601, 1791, 2027, 2040
AcoI	YGGCCR	1 cut(s)	1470
AcsI	RAATTY	4 cut(s)	575, 1340, 1438, 1938
AcuI	CTGAAG	2 cut(s)	366, 1671
AcyI	GRCGYC	1 cut(s)	886
AfaI	GTAC	5 cut(s)	81, 155, 835, 1310, 1750
AfiI	CCNNNNNNNGG	4 cut(s)	680, 843, 1716, 1965
AflIII	ACRYGT	2 cut(s)	397, 1636
AhlI	ACTAGT	1 cut(s)	1045
AjnI	CCWGG	4 cut(s)	836, 925, 1477, 1958
Alw21I	GWGCWC	2 cut(s)	1846, 2048
Alw26I	GTCTC	2 cut(s)	206, 563
Alw44I	GTGCAC	1 cut(s)	1842
AlwI	GGATC	4 cut(s)	1601, 1791, 2027, 2040
AoxI	GGCC	8 cut(s)	129, 1071, 1453, 1470, 1557, 1753, 1814, 1967
ApaLI	GTGCAC	1 cut(s)	1842
ApeKI	GCWGC	4 cut(s)	326, 718, 1051, 1133
ApoI	RAATTY	4 cut(s)	575, 1340, 1438, 1938
Asp700I	GAANNNNTTC	3 cut(s)	1002, 1097, 1576
Asp718I	GGTACC	1 cut(s)	833
AspLEI	GCGC	1 cut(s)	888
AspS9I	GGNCC	4 cut(s)	130, 929, 1454, 1754
AsuC2I	CCSGG	1 cut(s)	133
AsuHPI	GGTGA	3 cut(s)	663, 1361, 1460
AsuII	TTCGAA	1 cut(s)	1821
AvaII	GGWCC	1 cut(s)	929
AxyI	CCTNAGG	2 cut(s)	933, 1121
BaeGI	GKGCMC	1 cut(s)	1846
BaeI	ACNNNNGTAYC	2 cut(s)	1015, 1048
BalI	TGGCCA	1 cut(s)	1472
BamHI	GGATCC	1 cut(s)	2032
BanI	GGYRCC	2 cut(s)	833, 885
BanII	GRGCYC	2 cut(s)	532, 2048
BbsI	GAAGAC	3 cut(s)	923, 950, 995
Bbv12I	GWGCWC	2 cut(s)	1846, 2048
BbvI	GCAGC	4 cut(s)	338, 730, 1038, 1120
BccI	CCATC	4 cut(s)	217, 1291, 1364, 1618
BceAI	ACGGC	3 cut(s)	87, 463, 649
BciT130I	CCWGG	4 cut(s)	838, 927, 1479, 1960
BclI	TGATCA	1 cut(s)	1542
BcnI	CCSGG	1 cut(s)	133
BcoDI	GTCTC	2 cut(s)	206, 563
BcuI	ACTAGT	1 cut(s)	1045
BfaI	CTAG	7 cut(s)	689, 1046, 1631, 1764, 1839, 1848, 2004
BfmI	CTRYAG	1 cut(s)	806
BfoI	RGCGCY	1 cut(s)	889
BfuAI	ACCTGC	1 cut(s)	652
BisI	GCNGC	7 cut(s)	106, 327, 719, 1052, 1134, 1692, 1979
BlsI	GCNGC	7 cut(s)	107, 328, 720, 1053, 1135, 1693, 1980
BmcAI	AGTACT	1 cut(s)	1310
Bme1390I	CCNGG	5 cut(s)	133, 838, 927, 1479, 1960
Bme18I	GGWCC	1 cut(s)	929
BmgT120I	GGNCC	4 cut(s)	130, 929, 1454, 1754
BmiI	GGNNCC	4 cut(s)	835, 887, 1573, 2034
BmrFI	CCNGG	5 cut(s)	133, 838, 927, 1479, 1960
BmrI	ACTGGG	1 cut(s)	1839
BmsI	GCATC	6 cut(s)	313, 600, 1141, 1523, 1645, 1703
BmuI	ACTGGG	1 cut(s)	1839
BpiI	GAAGAC	3 cut(s)	923, 950, 995
BpmI	CTGGAG	2 cut(s)	339, 1289
Bpu10I	CCTNAGC	2 cut(s)	1964, 2042
Bpu14I	TTCGAA	1 cut(s)	1821
BpuEI	CTTGAG	1 cut(s)	374
BpuMI	CCSGG	1 cut(s)	133
Bsa29I	ATCGAT	1 cut(s)	1286
BsaAI	YACGTR	1 cut(s)	1181
BsaBI	GATNNNNATC	1 cut(s)	1788
BsaHI	GRCGYC	1 cut(s)	886
BsaJI	CCNNGG	2 cut(s)	904, 1213
BsaWI	WCCGGW	1 cut(s)	49
Bsc4I	CCNNNNNNNGG	4 cut(s)	680, 843, 1716, 1965
Bse118I	RCCGGY	1 cut(s)	1371
Bse1I	ACTGG	6 cut(s)	557, 835, 971, 1074, 1306, 1834
Bse21I	CCTNAGG	2 cut(s)	933, 1121
Bse8I	GATNNNNATC	1 cut(s)	1788
BseBI	CCWGG	4 cut(s)	838, 927, 1479, 1960
BseCI	ATCGAT	1 cut(s)	1286
BseDI	CCNNGG	2 cut(s)	904, 1213
BseGI	GGATG	3 cut(s)	1024, 1244, 1694
BseJI	GATNNNNATC	1 cut(s)	1788
BseLI	CCNNNNNNNGG	4 cut(s)	680, 843, 1716, 1965
BseMII	CTCAG	7 cut(s)	947, 1345, 1422, 1772, 1788, 1978, 2033
BseNI	ACTGG	6 cut(s)	557, 835, 971, 1074, 1306, 1834
BseRI	GAGGAG	3 cut(s)	342, 392, 1703
BseSI	GKGCMC	1 cut(s)	1846
BseXI	GCAGC	4 cut(s)	338, 730, 1038, 1120
BseYI	CCCAGC	1 cut(s)	733
BshFI	GGCC	8 cut(s)	131, 1073, 1455, 1472, 1559, 1755, 1816, 1969
BshNI	GGYRCC	2 cut(s)	833, 885
BshVI	ATCGAT	1 cut(s)	1286
BsiHKAI	GWGCWC	2 cut(s)	1846, 2048
BsiSI	CCGG	4 cut(s)	50, 133, 1372, 1717
BslFI	GGGAC	3 cut(s)	1101, 1539, 1846
BslI	CCNNNNNNNGG	4 cut(s)	680, 843, 1716, 1965
BsmAI	GTCTC	2 cut(s)	206, 563
BsmFI	GGGAC	3 cut(s)	1101, 1539, 1846
BsnI	GGCC	8 cut(s)	131, 1073, 1455, 1472, 1559, 1755, 1816, 1969
Bsp119I	TTCGAA	1 cut(s)	1821
Bsp1286I	GDGCHC	3 cut(s)	532, 1846, 2048
Bsp1407I	TGTACA	1 cut(s)	1748
Bsp143I	GATC	6 cut(s)	499, 1287, 1542, 1606, 1783, 2032
Bsp19I	CCATGG	1 cut(s)	904
BspACI	CCGC	3 cut(s)	105, 1692, 1978
BspANI	GGCC	8 cut(s)	131, 1073, 1455, 1472, 1559, 1755, 1816, 1969
BspCNI	CTCAG	7 cut(s)	946, 1344, 1421, 1771, 1789, 1977, 2034
BspDI	ATCGAT	1 cut(s)	1286
BspHI	TCATGA	1 cut(s)	2057
BspLI	GGNNCC	4 cut(s)	835, 887, 1573, 2034
BspMI	ACCTGC	1 cut(s)	652
BspPI	GGATC	4 cut(s)	1601, 1791, 2027, 2040
BspQI	GCTCTTC	1 cut(s)	893
BspT104I	TTCGAA	1 cut(s)	1821
BspT107I	GGYRCC	2 cut(s)	833, 885
BsrFI	RCCGGY	1 cut(s)	1371
BsrGI	TGTACA	1 cut(s)	1748
BsrI	ACTGG	6 cut(s)	557, 835, 971, 1074, 1306, 1834
BssAI	RCCGGY	1 cut(s)	1371
BssECI	CCNNGG	2 cut(s)	904, 1213
BssMI	GATC	6 cut(s)	499, 1287, 1542, 1606, 1783, 2032
BssNI	GRCGYC	1 cut(s)	886
BssT1I	CCWWGG	2 cut(s)	904, 1213
Bst2UI	CCWGG	4 cut(s)	838, 927, 1479, 1960
Bst4CI	ACNGT	6 cut(s)	84, 153, 194, 658, 772, 1513
Bst6I	CTCTTC	2 cut(s)	893, 1582
BstACI	GRCGYC	1 cut(s)	886
BstAPI	GCANNNNNTGC	1 cut(s)	1700
BstAUI	TGTACA	1 cut(s)	1748
BstBAI	YACGTR	1 cut(s)	1181
BstBI	TTCGAA	1 cut(s)	1821
BstC8I	GCNNGC	2 cut(s)	615, 1056
BstDSI	CCRYGG	1 cut(s)	904
BstENI	CCTNNNNNAGG	2 cut(s)	678, 1963
BstF5I	GGATG	3 cut(s)	1024, 1244, 1694
BstH2I	RGCGCY	1 cut(s)	889
BstHHI	GCGC	1 cut(s)	888
BstKTI	GATC	6 cut(s)	502, 1290, 1545, 1609, 1786, 2035
BstMAI	GTCTC	2 cut(s)	206, 563
BstMBI	GATC	6 cut(s)	499, 1287, 1542, 1606, 1783, 2032
BstMWI	GCNNNNNNNGC	7 cut(s)	527, 596, 623, 1070, 1372, 1700, 1975
BstNI	CCWGG	4 cut(s)	838, 927, 1479, 1960
BstNSI	RCATGY	4 cut(s)	231, 401, 1058, 1640
BstSCI	CCNGG	5 cut(s)	131, 836, 925, 1477, 1958
BstSFI	CTRYAG	1 cut(s)	806
BstSLI	GKGCMC	1 cut(s)	1846
BstV1I	GCAGC	4 cut(s)	338, 730, 1038, 1120
BstV2I	GAAGAC	3 cut(s)	923, 950, 995
BstX2I	RGATCY	2 cut(s)	1606, 2032
BstXI	CCANNNNNNTGG	1 cut(s)	911
BstYI	RGATCY	2 cut(s)	1606, 2032
Bsu15I	ATCGAT	1 cut(s)	1286
Bsu36I	CCTNAGG	2 cut(s)	933, 1121
BsuRI	GGCC	8 cut(s)	131, 1073, 1455, 1472, 1559, 1755, 1816, 1969
BsuTUI	ATCGAT	1 cut(s)	1286
BtgI	CCRYGG	1 cut(s)	904
BtsCI	GGATG	3 cut(s)	1024, 1244, 1694
BtsI	GCAGTG	3 cut(s)	36, 492, 1664
BtsIMutI	CAGTG	9 cut(s)	36, 492, 564, 768, 964, 1081, 1518, 1664, 1693
BveI	ACCTGC	1 cut(s)	652
Cac8I	GCNNGC	2 cut(s)	615, 1056
CciI	TCATGA	1 cut(s)	2057
CfoI	GCGC	1 cut(s)	888
Cfr10I	RCCGGY	1 cut(s)	1371
Cfr13I	GGNCC	4 cut(s)	130, 929, 1454, 1754
ClaI	ATCGAT	1 cut(s)	1286
CsiI	ACCWGGT	1 cut(s)	836
Csp6I	GTAC	5 cut(s)	80, 154, 834, 1309, 1749
CviQI	GTAC	5 cut(s)	80, 154, 834, 1309, 1749
DinI	GGCGCC	1 cut(s)	887
DpnI	GATC	6 cut(s)	501, 1289, 1544, 1608, 1785, 2034
DpnII	GATC	6 cut(s)	499, 1287, 1542, 1606, 1783, 2032
DrdI	GACNNNNNNGTC	1 cut(s)	1913
DseDI	GACNNNNNNGTC	1 cut(s)	1913
EaeI	YGGCCR	1 cut(s)	1470
Eam1104I	CTCTTC	2 cut(s)	893, 1582
EarI	CTCTTC	2 cut(s)	893, 1582
Ecl136II	GAGCTC	1 cut(s)	2046
Eco130I	CCWWGG	2 cut(s)	904, 1213
Eco147I	AGGCCT	2 cut(s)	1816, 1969
Eco24I	GRGCYC	2 cut(s)	532, 2048
Eco47I	GGWCC	1 cut(s)	929
Eco53kI	GAGCTC	1 cut(s)	2046
Eco57I	CTGAAG	2 cut(s)	366, 1671
Eco81I	CCTNAGG	2 cut(s)	933, 1121
EcoICRI	GAGCTC	1 cut(s)	2046
EcoNI	CCTNNNNNAGG	2 cut(s)	678, 1963
EcoO109I	RGGNCCY	2 cut(s)	1454, 1754
EcoRII	CCWGG	4 cut(s)	836, 925, 1477, 1958
EcoT14I	CCWWGG	2 cut(s)	904, 1213
EcoT38I	GRGCYC	2 cut(s)	532, 2048
EgeI	GGCGCC	1 cut(s)	887
EheI	GGCGCC	1 cut(s)	887
ErhI	CCWWGG	2 cut(s)	904, 1213
FalI	AAGNNNNNCTT	4 cut(s)	294, 326, 1140, 1172
FaqI	GGGAC	3 cut(s)	1101, 1539, 1846
FbaI	TGATCA	1 cut(s)	1542
FblI	GTMKAC	1 cut(s)	186
Fnu4HI	GCNGC	7 cut(s)	106, 327, 719, 1052, 1134, 1692, 1979
FokI	GGATG	3 cut(s)	1031, 1231, 1681
FriOI	GRGCYC	2 cut(s)	532, 2048
Fsp4HI	GCNGC	7 cut(s)	106, 327, 719, 1052, 1134, 1692, 1979
FspBI	CTAG	7 cut(s)	689, 1046, 1631, 1764, 1839, 1848, 2004
GlaI	GCGC	1 cut(s)	887
GluI	GCNGC	7 cut(s)	106, 327, 719, 1052, 1134, 1692, 1979
GsaI	CCCAGC	1 cut(s)	737
GsuI	CTGGAG	2 cut(s)	339, 1289
HaeII	RGCGCY	1 cut(s)	889
HaeIII	GGCC	8 cut(s)	131, 1073, 1455, 1472, 1559, 1755, 1816, 1969
HapII	CCGG	4 cut(s)	50, 133, 1372, 1717
HhaI	GCGC	1 cut(s)	888
Hin1I	GRCGYC	1 cut(s)	886
Hin6I	GCGC	1 cut(s)	886
HinP1I	GCGC	1 cut(s)	886
HincII	GTYRAC	1 cut(s)	766
HindII	GTYRAC	1 cut(s)	766
HindIII	AAGCTT	1 cut(s)	361
HinfI	GANTC	6 cut(s)	408, 692, 822, 1079, 1085, 1417
HpaI	GTTAAC	1 cut(s)	766
HpaII	CCGG	4 cut(s)	50, 133, 1372, 1717
HphI	GGTGA	3 cut(s)	663, 1361, 1460
Hpy166II	GTNNAC	5 cut(s)	187, 766, 998, 1400, 1844
Hpy188I	TCNGA	6 cut(s)	776, 796, 897, 1084, 1487, 1798
Hpy188III	TCNNGA	7 cut(s)	311, 356, 506, 1410, 1764, 2041, 2058
Hpy8I	GTNNAC	5 cut(s)	187, 766, 998, 1400, 1844
Hpy99I	CGWCG	1 cut(s)	507
HpyAV	CCTTC	7 cut(s)	265, 559, 899, 1113, 1445, 1467, 1866
HpyCH4III	ACNGT	6 cut(s)	84, 153, 194, 658, 772, 1513
HpyCH4IV	ACGT	3 cut(s)	1000, 1030, 1180
HpyF10VI	GCNNNNNNNGC	7 cut(s)	527, 596, 623, 1070, 1372, 1700, 1975
HpySE526I	ACGT	3 cut(s)	1000, 1030, 1180
Hsp92I	GRCGYC	1 cut(s)	886
HspAI	GCGC	1 cut(s)	886
KasI	GGCGCC	1 cut(s)	885
KpnI	GGTACC	1 cut(s)	837
Ksp22I	TGATCA	1 cut(s)	1542
KspAI	GTTAAC	1 cut(s)	766
Kzo9I	GATC	6 cut(s)	499, 1287, 1542, 1606, 1783, 2032
LguI	GCTCTTC	1 cut(s)	893
LmnI	GCTCC	4 cut(s)	34, 355, 1300, 1495
Lsp1109I	GCAGC	4 cut(s)	338, 730, 1038, 1120
LweI	GCATC	6 cut(s)	313, 600, 1141, 1523, 1645, 1703
MabI	ACCWGGT	1 cut(s)	836
MaeI	CTAG	7 cut(s)	689, 1046, 1631, 1764, 1839, 1848, 2004
MaeII	ACGT	3 cut(s)	1000, 1030, 1180
MaeIII	GTNAC	4 cut(s)	393, 1346, 1886, 1926
MalI	GATC	6 cut(s)	501, 1289, 1544, 1608, 1785, 2034
MboI	GATC	6 cut(s)	499, 1287, 1542, 1606, 1783, 2032
MfeI	CAATTG	2 cut(s)	294, 1007
MflI	RGATCY	2 cut(s)	1606, 2032
MhlI	GDGCHC	3 cut(s)	532, 1846, 2048
MlsI	TGGCCA	1 cut(s)	1472
MluNI	TGGCCA	1 cut(s)	1472
Mly113I	GGCGCC	1 cut(s)	886
MlyI	GAGTC	2 cut(s)	402, 701
MmeI	TCCRAC	1 cut(s)	754
Mox20I	TGGCCA	1 cut(s)	1472
MroXI	GAANNNNTTC	3 cut(s)	1002, 1097, 1576
MscI	TGGCCA	1 cut(s)	1472
Msp20I	TGGCCA	1 cut(s)	1472
MspA1I	CMGCKG	1 cut(s)	590
MspI	CCGG	4 cut(s)	50, 133, 1372, 1717
MspR9I	CCNGG	5 cut(s)	133, 838, 927, 1479, 1960
MunI	CAATTG	2 cut(s)	294, 1007
MvaI	CCWGG	4 cut(s)	838, 927, 1479, 1960
MwoI	GCNNNNNNNGC	7 cut(s)	527, 596, 623, 1070, 1372, 1700, 1975
NarI	GGCGCC	1 cut(s)	886
NciI	CCSGG	1 cut(s)	133
NcoI	CCATGG	1 cut(s)	904
NdeII	GATC	6 cut(s)	499, 1287, 1542, 1606, 1783, 2032
NlaIV	GGNNCC	4 cut(s)	835, 887, 1573, 2034
NspI	RCATGY	4 cut(s)	231, 401, 1058, 1640
NspV	TTCGAA	1 cut(s)	1821
PaeI	GCATGC	1 cut(s)	1058
PagI	TCATGA	1 cut(s)	2057
PceI	AGGCCT	2 cut(s)	1816, 1969
PciI	ACATGT	2 cut(s)	397, 1636
PciSI	GCTCTTC	1 cut(s)	893
PdmI	GAANNNNTTC	3 cut(s)	1002, 1097, 1576
PfeI	GAWTC	4 cut(s)	822, 1079, 1085, 1417
PfoI	TCCNGGA	1 cut(s)	925
PkrI	GCNGC	7 cut(s)	107, 328, 720, 1053, 1135, 1693, 1980
PleI	GAGTC	2 cut(s)	402, 700
PluTI	GGCGCC	1 cut(s)	889
PpsI	GAGTC	2 cut(s)	402, 700
Ppu21I	YACGTR	1 cut(s)	1181
PscI	ACATGT	2 cut(s)	397, 1636
Psp124BI	GAGCTC	1 cut(s)	2048
Psp6I	CCWGG	4 cut(s)	836, 925, 1477, 1958
PspFI	CCCAGC	1 cut(s)	733
PspGI	CCWGG	4 cut(s)	836, 925, 1477, 1958
PspN4I	GGNNCC	4 cut(s)	835, 887, 1573, 2034
PspPI	GGNCC	4 cut(s)	130, 929, 1454, 1754
PsuI	RGATCY	2 cut(s)	1606, 2032
PvuII	CAGCTG	1 cut(s)	590
RsaI	GTAC	5 cut(s)	81, 155, 835, 1310, 1750
RsaNI	GTAC	5 cut(s)	80, 154, 834, 1309, 1749
SacI	GAGCTC	1 cut(s)	2048
SapI	GCTCTTC	1 cut(s)	893
SatI	GCNGC	7 cut(s)	106, 327, 719, 1052, 1134, 1692, 1979
Sau3AI	GATC	6 cut(s)	499, 1287, 1542, 1606, 1783, 2032
Sau96I	GGNCC	4 cut(s)	130, 929, 1454, 1754
ScaI	AGTACT	1 cut(s)	1310
SchI	GAGTC	2 cut(s)	402, 701
ScrFI	CCNGG	5 cut(s)	133, 838, 927, 1479, 1960
SduI	GDGCHC	3 cut(s)	532, 1846, 2048
SexAI	ACCWGGT	1 cut(s)	836
SfaNI	GCATC	6 cut(s)	313, 600, 1141, 1523, 1645, 1703
SfcI	CTRYAG	1 cut(s)	806
SfoI	GGCGCC	1 cut(s)	887
SfuI	TTCGAA	1 cut(s)	1821
SinI	GGWCC	1 cut(s)	929
SmlI	CTYRAG	1 cut(s)	389
SmoI	CTYRAG	1 cut(s)	389
SpeI	ACTAGT	1 cut(s)	1045
SphI	GCATGC	1 cut(s)	1058
SseBI	AGGCCT	2 cut(s)	1816, 1969
SsiI	CCGC	3 cut(s)	105, 1692, 1978
SspDI	GGCGCC	1 cut(s)	885
SspI	AATATT	2 cut(s)	850, 1584
SspMI	CTAG	7 cut(s)	689, 1046, 1631, 1764, 1839, 1848, 2004
SstI	GAGCTC	1 cut(s)	2048
StuI	AGGCCT	2 cut(s)	1816, 1969
StyD4I	CCNGG	5 cut(s)	131, 836, 925, 1477, 1958
StyI	CCWWGG	2 cut(s)	904, 1213
TaaI	ACNGT	6 cut(s)	84, 153, 194, 658, 772, 1513
TaiI	ACGT	3 cut(s)	1003, 1033, 1183
TaqI	TCGA	4 cut(s)	277, 411, 1286, 1821
TatI	WGTACW	2 cut(s)	1308, 1748
TauI	GCSGC	3 cut(s)	108, 1694, 1981
TfiI	GAWTC	4 cut(s)	822, 1079, 1085, 1417
TscAI	CASTG	9 cut(s)	36, 499, 564, 775, 971, 1081, 1518, 1671, 1693
TseI	GCWGC	4 cut(s)	326, 718, 1051, 1133
TspDTI	ATGAA	6 cut(s)	650, 728, 990, 1035, 1448, 1842
TspGWI	ACGGA	1 cut(s)	834
TspRI	CASTG	9 cut(s)	36, 499, 564, 775, 971, 1081, 1518, 1671, 1693
VneI	GTGCAC	1 cut(s)	1842
VpaK11BI	GGWCC	1 cut(s)	929
XagI	CCTNNNNNAGG	2 cut(s)	678, 1963
XapI	RAATTY	4 cut(s)	575, 1340, 1438, 1938
XbaI	TCTAGA	1 cut(s)	1763
XceI	RCATGY	4 cut(s)	231, 401, 1058, 1640
XmiI	GTMKAC	1 cut(s)	186
XmnI	GAANNNNTTC	3 cut(s)	1002, 1097, 1576
XspI	CTAG	7 cut(s)	689, 1046, 1631, 1764, 1839, 1848, 2004
ZrmI	AGTACT	1 cut(s)	1310

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.