Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0002324

Physical Location & Seq

Genomic Coordinates Forward (+)

15689265 .. 15765681

Gene Structure 76417 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG154100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1770 bp

ATGTTTTGCAGTTCTATGCGAGGTCCTGAGTCAAAGCAAGTCTGCCCAGAGATCCAACTGGTTCAAGTCCCAGTAGCACGTGGTAAAGCTGACCTGAACTCATACCGGAATGCCGGTTCAGAGGTGGTTTCCATTTTATCAAGGAAGGGTCGATGTGAGAGGGCTTCAATTGACGAAGTGTATCTTGACCTTACTGATGCAGCAGAAACCATGTTAGCTGAAGCTCCTCCAGAAAGCTTGGAAGCAATTGAGGAGGAAGCTCTCAAGTCACATGTTTTGGGACTCGATAATGAGGACGGCAGTGAAGCCAAAGAAAATGTGAGGAAATGGCTTTGCAAAACCAATGCTGATCGTCATGATAAGCTATTAGCTTGTGGGGCTCTCATCGTTGCAGAACTTAGGTTGCTAGTGTTGAAGGAGACAGAATTTACTTGTTCAGCTGGCATTGCTCATAATAAGATGCTGGCTAAACTTGCAAGTGGTATGAATAAACCTGCACAACAGACTGTTGTGCCGTTATCATCTGTGAAAGGATTGCTAGAGTCCTTGCCAATTAAGAAAATGAAACAGCTTGGAGGAAAGCTGGGGAGTTCCTTACAAACTGACCTGGGTGTTAACACTGTCGGAGATTTATTGCAGTTTTCAGAGGAAAAGCTACAGCAACGCTACGGAATCAATACTGGTACCTGGTTATGGAATATTGCAAGGGGGATAAGTGGGGAAGAAGTTGAGGGGCGCCTTCTTCCGAAGAGCCATGGTTCTGGGAAGACGTTTCCTGGACCTCAGGCTTTGAAGACGATTTCTTCTGTTCAACACTGGCTTAATGAACTTTGTGAAGATTTGAGTGAACGTCTTCAATTGGACTTGGATGAAAATAAACGTATCGCTCATACACTAGTGCTGCATGCCAACGCATACAAGGCCAGTGATTCAGATTCACAGAAGAAGTTCCCTTCTAAATCTTGTCCCCTTAGGTATGGGGCTGCCAAGATACAAGAAGATGCTCTTAATCTCTTTCAAGCTGCATTACGTGAATACTTGGGTTTATTCACAGCCAAAATCCAAGGAAGTCAAAATAACCAATGGGGAATAACATCCCTCTCTGTTTCAGCAAGTAAAATTGTTCCTATACCATCGGGAACAGCTTCAATTATGAAATACTTTCATGGTCATCAGCCATCCTCTTCGACAAAGCAATCACAGGATAATTTCATTGAAGAATCTGTGCCTCCACCACCTTCAGGTAATGAGAACTACTCGGAGCTGAATGTAAATAAGCCACAGATCGAGTTACCTTGTGAAGAAACTACGATCAAGTATTTTGTGCCTAGTTTGCATCAACTGGAAGACAAAAAAAATTTGTTGAATGACCAGGGAACCTCTTCAATATTGAGATTTTTTAAGAACCAAGATCCATCTTCCTCTCTGAAAAAGCTAGAACATGTAGAAAATACTGAAGATGCTAAAGCACTGCTATCTGTTGGCTCTCAGTCTAGAAGTGATAATTATTTGGATCATAATCAATCAGAGTTGCCAAAAGAAAGGCCTTTCGAAGAAACTGGGACTTCTAGCGCACCTAGTTCATCTCAATTTGAACAAAGAAGGGGAGTATGGAGTTACAATACTGACGAGATTGACCCCTCTGTCATTGATGAGTTACCACCAGAAATTCAACAAGAAGTTCGTGCCTGGCTCAGGCCTCACAAGCGGCAAAATGTAGCGAAACGGGGTTCTAGTATTGCCGATTATTTCTTACCCACAAGTCTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000731 GO:0003674 GO:0003676 GO:0003677 GO:0003684 GO:0003824 GO:0003887 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006139 GO:0006259 GO:0006281 GO:0006282 GO:0006301 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009650 GO:0009987 GO:0010224 GO:0010225 GO:0016740 GO:0016772 GO:0016779 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019985 GO:0031323 GO:0031974 GO:0031981 GO:0033554 GO:0034061 GO:0034641 GO:0034645 GO:0034654 GO:0042276 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051171 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0070987 GO:0071704 GO:0071897 GO:0080090 GO:0080134 GO:0080135 GO:0090304 GO:0097159 GO:0140097 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:2001020

KEGG Pathways

Metabolic & Signaling

ko01524 ko03460 map01524 map03460

Pfam Domains

Protein Families

IMS IMS_C

Protein Analysis

589

Amino Acids

65.14

Weight (kDa)

5.83

Isoelectric Point (pI)

54.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IMS	PF00817	5 - 160	3.9e-19	impB/mucB/samB family
POLH-Rev1_HhH	PF21704	183 - 238	4.1e-24	DNApol eta/Rev1, HhH motif
IMS_HHH_1	PF21999	194 - 238	3.9e-06	DNA polymerase-iota, thumb domain
IMS_C	PF11799	249 - 376	1.6e-09	impB/mucB/samB family C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002324)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G44740 AT5G44740 AT5G44740
fragaria_vesca	FvH4_3g13010 FvH4_3g13010 FvH4_3g13010 FvH4_3g13010
malus_domestica	MD10G1227100.v1.1 MD10G1227200.v1.1
prunus_persica	Prupe.4G118000_v2.0.a1 Prupe.4G118000_v2.0.a1 Prupe.4G118000_v2.0.a1
pyrus_communis	pycom10g19090
rosa_chinensis	RchiOBHm_Chr4g0406911 RchiOBHm_Chr4g0406921 RchiOBHm_Chr5g0021111 RchiOBHm_Chr5g0021121 RchiOBHm_Chr5g0021171 RchiOBHm_Chr5g0021201
rosa_laevigata	RLG00000032590 RLG00000032594
rosa_multiflora	Rmu_sc0002467.1_g000007 Rmu_sc0002467.1_g000009 Rmu_sc0002467.1_g000013 Rmu_sc0002467.1_g000015 Rmu_sc0012431.1_g000002
rosa_roxburghii	Rroxscaffold_1G00057300 Rroxscaffold_1G00057320 Rroxscaffold_1G00057330 Rroxscaffold_5G00351670
rosa_rugosa	Rorug05G0064800 Rorug05G0065100 Rorug05G0065100
rosa_samantha	Rh5AG154000 Rh5BG153700 Rh5CG166700 Rh5CG167300 Rh5DG154100
rosa_wichuraiana	Rw1G022470 Rw5G013690 Rw5G013710 Rw5G013730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1643
Acc36I	ACCTGC	1 cut(s)	502
Acc65I	GGTACC	1 cut(s)	683
AccB1I	GGYRCC	2 cut(s)	683, 735
AciI	CCGC	1 cut(s)	1708
AclWI	GGATC	3 cut(s)	46, 1406, 1521
AcsI	RAATTY	3 cut(s)	425, 1357, 1668
AcuI	CTGAAG	3 cut(s)	240, 1224, 1476
AcvI	CACGTG	1 cut(s)	80
AcyI	GRCGYC	1 cut(s)	736
AfaI	GTAC	1 cut(s)	685
AfiI	CCNNNNNNNGG	3 cut(s)	693, 1241, 1695
AflIII	ACRYGT	2 cut(s)	271, 1441
AhlI	ACTAGT	1 cut(s)	895
AjnI	CCWGG	5 cut(s)	606, 686, 775, 1371, 1688
AloI	GAACNNNNNNTCC	2 cut(s)	100, 132
Alw26I	GTCTC	1 cut(s)	413
AlwI	GGATC	3 cut(s)	46, 1406, 1521
AoxI	GGCC	3 cut(s)	921, 1544, 1697
ApeKI	GCWGC	4 cut(s)	200, 901, 983, 1022
ApoI	RAATTY	3 cut(s)	425, 1357, 1668
Asp700I	GAANNNNTTC	4 cut(s)	852, 947, 1144, 1381
Asp718I	GGTACC	1 cut(s)	683
AspLEI	GCGC	2 cut(s)	738, 1574
AspS9I	GGNCC	2 cut(s)	23, 779
AsuII	TTCGAA	1 cut(s)	1551
AvaII	GGWCC	2 cut(s)	23, 779
AxyI	CCTNAGG	2 cut(s)	783, 971
BanI	GGYRCC	2 cut(s)	683, 735
BanII	GRGCYC	1 cut(s)	382
BbrPI	CACGTG	1 cut(s)	80
BbsI	GAAGAC	4 cut(s)	773, 800, 845, 1353
BbvI	GCAGC	4 cut(s)	212, 888, 970, 1009
BccI	CCATC	3 cut(s)	1141, 1186, 1423
BceAI	ACGGC	2 cut(s)	313, 499
BciT130I	CCWGG	5 cut(s)	608, 688, 777, 1373, 1690
BcoDI	GTCTC	1 cut(s)	413
BcuI	ACTAGT	1 cut(s)	895
BfaI	CTAG	9 cut(s)	407, 539, 896, 1329, 1436, 1494, 1569, 1578, 1734
BfmI	CTRYAG	1 cut(s)	656
BfoI	RGCGCY	1 cut(s)	739
BfuAI	ACCTGC	1 cut(s)	502
BisI	GCNGC	5 cut(s)	201, 902, 984, 1023, 1709
BlsI	GCNGC	5 cut(s)	202, 903, 985, 1024, 1710
Bme1390I	CCNGG	5 cut(s)	608, 688, 777, 1373, 1690
Bme18I	GGWCC	2 cut(s)	23, 779
BmgT120I	GGNCC	2 cut(s)	23, 779
BmiI	GGNNCC	3 cut(s)	685, 737, 1378
BmrFI	CCNGG	5 cut(s)	608, 688, 777, 1373, 1690
BmrI	ACTGGG	2 cut(s)	65, 1569
BmsI	GCATC	5 cut(s)	187, 450, 991, 1345, 1450
BmuI	ACTGGG	2 cut(s)	65, 1569
BpiI	GAAGAC	4 cut(s)	773, 800, 845, 1353
BplI	GAGNNNNNCTC	2 cut(s)	1241, 1273
BpmI	CTGGAG	1 cut(s)	213
Bpu10I	CCTNAGC	1 cut(s)	1694
Bpu14I	TTCGAA	1 cut(s)	1551
BpuEI	CTTGAG	1 cut(s)	248
BsaAI	YACGTR	2 cut(s)	80, 1031
BsaBI	GATNNNNATC	1 cut(s)	1518
BsaHI	GRCGYC	1 cut(s)	736
BsaJI	CCNNGG	4 cut(s)	607, 754, 1063, 1372
BsaWI	WCCGGW	1 cut(s)	105
Bsc4I	CCNNNNNNNGG	3 cut(s)	693, 1241, 1695
Bse118I	RCCGGY	1 cut(s)	113
Bse1I	ACTGG	7 cut(s)	63, 71, 685, 821, 924, 1347, 1564
Bse21I	CCTNAGG	2 cut(s)	783, 971
Bse3DI	GCAATG	1 cut(s)	444
Bse8I	GATNNNNATC	1 cut(s)	1518
BseBI	CCWGG	5 cut(s)	608, 688, 777, 1373, 1690
BseDI	CCNNGG	4 cut(s)	607, 754, 1063, 1372
BseGI	GGATG	3 cut(s)	874, 1094, 1178
BseJI	GATNNNNATC	1 cut(s)	1518
BseLI	CCNNNNNNNGG	3 cut(s)	693, 1241, 1695
BseMI	GCAATG	1 cut(s)	444
BseMII	CTCAG	4 cut(s)	18, 797, 1502, 1708
BseNI	ACTGG	7 cut(s)	63, 71, 685, 821, 924, 1347, 1564
BseRI	GAGGAG	2 cut(s)	216, 266
BseXI	GCAGC	4 cut(s)	212, 888, 970, 1009
BseYI	CCCAGC	1 cut(s)	583
BsgI	GTGCAG	1 cut(s)	480
BshFI	GGCC	3 cut(s)	923, 1546, 1699
BshNI	GGYRCC	2 cut(s)	683, 735
BsiSI	CCGG	2 cut(s)	106, 114
BslFI	GGGAC	4 cut(s)	53, 294, 951, 1576
BslI	CCNNNNNNNGG	3 cut(s)	693, 1241, 1695
BsmAI	GTCTC	1 cut(s)	413
BsmFI	GGGAC	4 cut(s)	53, 294, 951, 1576
BsmI	GAATGC	1 cut(s)	115
BsnI	GGCC	3 cut(s)	923, 1546, 1699
Bsp119I	TTCGAA	1 cut(s)	1551
Bsp1286I	GDGCHC	1 cut(s)	382
Bsp143I	GATC	6 cut(s)	51, 349, 1284, 1311, 1411, 1513
Bsp19I	CCATGG	1 cut(s)	754
BspACI	CCGC	1 cut(s)	1708
BspANI	GGCC	3 cut(s)	923, 1546, 1699
BspCNI	CTCAG	4 cut(s)	19, 796, 1501, 1707
BspHI	TCATGA	1 cut(s)	355
BspLI	GGNNCC	3 cut(s)	685, 737, 1378
BspMI	ACCTGC	1 cut(s)	502
BspPI	GGATC	3 cut(s)	46, 1406, 1521
BspQI	GCTCTTC	1 cut(s)	743
BspT104I	TTCGAA	1 cut(s)	1551
BspT107I	GGYRCC	2 cut(s)	683, 735
BsrDI	GCAATG	1 cut(s)	444
BsrFI	RCCGGY	1 cut(s)	113
BsrI	ACTGG	7 cut(s)	63, 71, 685, 821, 924, 1347, 1564
BssAI	RCCGGY	1 cut(s)	113
BssECI	CCNNGG	4 cut(s)	607, 754, 1063, 1372
BssMI	GATC	6 cut(s)	51, 349, 1284, 1311, 1411, 1513
BssNI	GRCGYC	1 cut(s)	736
BssT1I	CCWWGG	2 cut(s)	754, 1063
Bst2UI	CCWGG	5 cut(s)	608, 688, 777, 1373, 1690
Bst4CI	ACNGT	2 cut(s)	508, 622
Bst6I	CTCTTC	3 cut(s)	743, 1189, 1387
BstACI	GRCGYC	1 cut(s)	736
BstBAI	YACGTR	2 cut(s)	80, 1031
BstBI	TTCGAA	1 cut(s)	1551
BstC8I	GCNNGC	3 cut(s)	442, 465, 906
BstDEI	CTNAG	6 cut(s)	27, 398, 783, 971, 1488, 1694
BstDSI	CCRYGG	1 cut(s)	754
BstENI	CCTNNNNNAGG	1 cut(s)	1693
BstF5I	GGATG	3 cut(s)	874, 1094, 1178
BstH2I	RGCGCY	1 cut(s)	739
BstHHI	GCGC	2 cut(s)	738, 1574
BstKTI	GATC	6 cut(s)	54, 352, 1287, 1314, 1414, 1516
BstMAI	GTCTC	1 cut(s)	413
BstMBI	GATC	6 cut(s)	51, 349, 1284, 1311, 1411, 1513
BstMWI	GCNNNNNNNGC	6 cut(s)	377, 446, 473, 920, 1333, 1705
BstNI	CCWGG	5 cut(s)	608, 688, 777, 1373, 1690
BstNSI	RCATGY	3 cut(s)	275, 908, 1445
BstSCI	CCNGG	5 cut(s)	606, 686, 775, 1371, 1688
BstSFI	CTRYAG	1 cut(s)	656
BstV1I	GCAGC	4 cut(s)	212, 888, 970, 1009
BstV2I	GAAGAC	4 cut(s)	773, 800, 845, 1353
BstX2I	RGATCY	2 cut(s)	51, 1411
BstXI	CCANNNNNNTGG	1 cut(s)	761
BstYI	RGATCY	2 cut(s)	51, 1411
Bsu36I	CCTNAGG	2 cut(s)	783, 971
BsuRI	GGCC	3 cut(s)	923, 1546, 1699
BtgI	CCRYGG	1 cut(s)	754
BtsCI	GGATG	3 cut(s)	874, 1094, 1178
BtsI	GCAGTG	2 cut(s)	307, 1469
BtsIMutI	CAGTG	5 cut(s)	307, 618, 814, 931, 1469
BveI	ACCTGC	1 cut(s)	502
Cac8I	GCNNGC	3 cut(s)	442, 465, 906
CciI	TCATGA	1 cut(s)	355
CfoI	GCGC	2 cut(s)	738, 1574
Cfr10I	RCCGGY	1 cut(s)	113
Cfr13I	GGNCC	2 cut(s)	23, 779
CsiI	ACCWGGT	1 cut(s)	686
Csp6I	GTAC	1 cut(s)	684
CviAII	CATG	7 cut(s)	211, 272, 356, 755, 905, 1166, 1442
CviQI	GTAC	1 cut(s)	684
DdeI	CTNAG	6 cut(s)	27, 398, 783, 971, 1488, 1694
DinI	GGCGCC	1 cut(s)	737
DpnI	GATC	6 cut(s)	53, 351, 1286, 1313, 1413, 1515
DpnII	GATC	6 cut(s)	51, 349, 1284, 1311, 1411, 1513
DrdI	GACNNNNNNGTC	1 cut(s)	1643
DseDI	GACNNNNNNGTC	1 cut(s)	1643
Eam1104I	CTCTTC	3 cut(s)	743, 1189, 1387
EarI	CTCTTC	3 cut(s)	743, 1189, 1387
Eco130I	CCWWGG	2 cut(s)	754, 1063
Eco147I	AGGCCT	2 cut(s)	1546, 1699
Eco24I	GRGCYC	1 cut(s)	382
Eco47I	GGWCC	2 cut(s)	23, 779
Eco57I	CTGAAG	3 cut(s)	240, 1224, 1476
Eco72I	CACGTG	1 cut(s)	80
Eco81I	CCTNAGG	2 cut(s)	783, 971
EcoNI	CCTNNNNNAGG	1 cut(s)	1693
EcoO109I	RGGNCCY	1 cut(s)	23
EcoRII	CCWGG	5 cut(s)	606, 686, 775, 1371, 1688
EcoT14I	CCWWGG	2 cut(s)	754, 1063
EcoT38I	GRGCYC	1 cut(s)	382
EgeI	GGCGCC	1 cut(s)	737
EheI	GGCGCC	1 cut(s)	737
ErhI	CCWWGG	2 cut(s)	754, 1063
FaeI	CATG	7 cut(s)	214, 275, 359, 758, 908, 1169, 1445
FalI	AAGNNNNNCTT	4 cut(s)	168, 200, 990, 1022
FaqI	GGGAC	4 cut(s)	53, 294, 951, 1576
FatI	CATG	7 cut(s)	210, 271, 355, 754, 904, 1165, 1441
Fnu4HI	GCNGC	5 cut(s)	201, 902, 984, 1023, 1709
FokI	GGATG	3 cut(s)	881, 1081, 1165
FriOI	GRGCYC	1 cut(s)	382
Fsp4HI	GCNGC	5 cut(s)	201, 902, 984, 1023, 1709
FspBI	CTAG	9 cut(s)	407, 539, 896, 1329, 1436, 1494, 1569, 1578, 1734
GlaI	GCGC	2 cut(s)	737, 1573
GluI	GCNGC	5 cut(s)	201, 902, 984, 1023, 1709
GsaI	CCCAGC	1 cut(s)	587
GsuI	CTGGAG	1 cut(s)	213
HaeII	RGCGCY	1 cut(s)	739
HaeIII	GGCC	3 cut(s)	923, 1546, 1699
HapII	CCGG	2 cut(s)	106, 114
HhaI	GCGC	2 cut(s)	738, 1574
Hin1I	GRCGYC	1 cut(s)	736
Hin1II	CATG	7 cut(s)	214, 275, 359, 758, 908, 1169, 1445
Hin6I	GCGC	2 cut(s)	736, 1572
HinP1I	GCGC	2 cut(s)	736, 1572
HincII	GTYRAC	1 cut(s)	616
HindII	GTYRAC	1 cut(s)	616
HindIII	AAGCTT	1 cut(s)	235
HinfI	GANTC	7 cut(s)	29, 282, 542, 672, 929, 935, 1220
HpaI	GTTAAC	1 cut(s)	616
HpaII	CCGG	2 cut(s)	106, 114
Hpy166II	GTNNAC	2 cut(s)	616, 848
Hpy188I	TCNGA	8 cut(s)	121, 626, 646, 747, 934, 1261, 1428, 1528
Hpy188III	TCNNGA	6 cut(s)	26, 185, 230, 356, 1137, 1494
Hpy8I	GTNNAC	2 cut(s)	616, 848
HpyAV	CCTTC	6 cut(s)	139, 409, 749, 963, 1248, 1596
HpyCH4III	ACNGT	2 cut(s)	508, 622
HpyCH4IV	ACGT	5 cut(s)	79, 770, 850, 880, 1030
HpyF10VI	GCNNNNNNNGC	6 cut(s)	377, 446, 473, 920, 1333, 1705
HpyF3I	CTNAG	6 cut(s)	27, 398, 783, 971, 1488, 1694
HpySE526I	ACGT	5 cut(s)	79, 770, 850, 880, 1030
Hsp92I	GRCGYC	1 cut(s)	736
Hsp92II	CATG	7 cut(s)	214, 275, 359, 758, 908, 1169, 1445
HspAI	GCGC	2 cut(s)	736, 1572
KasI	GGCGCC	1 cut(s)	735
KpnI	GGTACC	1 cut(s)	687
KspAI	GTTAAC	1 cut(s)	616
Kzo9I	GATC	6 cut(s)	51, 349, 1284, 1311, 1411, 1513
LguI	GCTCTTC	1 cut(s)	743
LmnI	GCTCC	2 cut(s)	229, 1261
Lsp1109I	GCAGC	4 cut(s)	212, 888, 970, 1009
LweI	GCATC	5 cut(s)	187, 450, 991, 1345, 1450
MabI	ACCWGGT	1 cut(s)	686
MaeI	CTAG	9 cut(s)	407, 539, 896, 1329, 1436, 1494, 1569, 1578, 1734
MaeII	ACGT	5 cut(s)	79, 770, 850, 880, 1030
MaeIII	GTNAC	4 cut(s)	267, 1290, 1616, 1656
MalI	GATC	6 cut(s)	53, 351, 1286, 1313, 1413, 1515
MboI	GATC	6 cut(s)	51, 349, 1284, 1311, 1411, 1513
MfeI	CAATTG	3 cut(s)	168, 246, 857
MflI	RGATCY	2 cut(s)	51, 1411
MhlI	GDGCHC	1 cut(s)	382
Mly113I	GGCGCC	1 cut(s)	736
MlyI	GAGTC	3 cut(s)	38, 276, 551
MmeI	TCCRAC	2 cut(s)	79, 604
MroXI	GAANNNNTTC	4 cut(s)	852, 947, 1144, 1381
MseI	TTAA	5 cut(s)	555, 615, 822, 1008, 1401
MspA1I	CMGCKG	1 cut(s)	440
MspI	CCGG	2 cut(s)	106, 114
MspR9I	CCNGG	5 cut(s)	608, 688, 777, 1373, 1690
MunI	CAATTG	3 cut(s)	168, 246, 857
Mva1269I	GAATGC	1 cut(s)	115
MvaI	CCWGG	5 cut(s)	608, 688, 777, 1373, 1690
MwoI	GCNNNNNNNGC	6 cut(s)	377, 446, 473, 920, 1333, 1705
NarI	GGCGCC	1 cut(s)	736
NcoI	CCATGG	1 cut(s)	754
NdeII	GATC	6 cut(s)	51, 349, 1284, 1311, 1411, 1513
NlaIII	CATG	7 cut(s)	214, 275, 359, 758, 908, 1169, 1445
NlaIV	GGNNCC	3 cut(s)	685, 737, 1378
NmuCI	GTSAC	1 cut(s)	267
NspI	RCATGY	3 cut(s)	275, 908, 1445
NspV	TTCGAA	1 cut(s)	1551
PaeI	GCATGC	1 cut(s)	908
PagI	TCATGA	1 cut(s)	355
PceI	AGGCCT	2 cut(s)	1546, 1699
PciI	ACATGT	2 cut(s)	271, 1441
PciSI	GCTCTTC	1 cut(s)	743
PctI	GAATGC	1 cut(s)	115
PdmI	GAANNNNTTC	4 cut(s)	852, 947, 1144, 1381
PfeI	GAWTC	4 cut(s)	672, 929, 935, 1220
PfoI	TCCNGGA	1 cut(s)	775
PkrI	GCNGC	5 cut(s)	202, 903, 985, 1024, 1710
PleI	GAGTC	3 cut(s)	37, 276, 550
PluTI	GGCGCC	1 cut(s)	739
PmaCI	CACGTG	1 cut(s)	80
PmlI	CACGTG	1 cut(s)	80
PpsI	GAGTC	3 cut(s)	37, 276, 550
Ppu21I	YACGTR	2 cut(s)	80, 1031
PpuMI	RGGWCCY	1 cut(s)	23
PscI	ACATGT	2 cut(s)	271, 1441
Psp5II	RGGWCCY	1 cut(s)	23
Psp6I	CCWGG	5 cut(s)	606, 686, 775, 1371, 1688
PspCI	CACGTG	1 cut(s)	80
PspFI	CCCAGC	1 cut(s)	583
PspGI	CCWGG	5 cut(s)	606, 686, 775, 1371, 1688
PspN4I	GGNNCC	3 cut(s)	685, 737, 1378
PspPI	GGNCC	2 cut(s)	23, 779
PspPPI	RGGWCCY	1 cut(s)	23
PsuI	RGATCY	2 cut(s)	51, 1411
PvuII	CAGCTG	1 cut(s)	440
RsaI	GTAC	1 cut(s)	685
RsaNI	GTAC	1 cut(s)	684
SapI	GCTCTTC	1 cut(s)	743
SaqAI	TTAA	5 cut(s)	555, 615, 822, 1008, 1401
SatI	GCNGC	5 cut(s)	201, 902, 984, 1023, 1709
Sau3AI	GATC	6 cut(s)	51, 349, 1284, 1311, 1411, 1513
Sau96I	GGNCC	2 cut(s)	23, 779
SchI	GAGTC	3 cut(s)	38, 276, 551
ScrFI	CCNGG	5 cut(s)	608, 688, 777, 1373, 1690
SduI	GDGCHC	1 cut(s)	382
SexAI	ACCWGGT	1 cut(s)	686
SfaNI	GCATC	5 cut(s)	187, 450, 991, 1345, 1450
SfcI	CTRYAG	1 cut(s)	656
SfoI	GGCGCC	1 cut(s)	737
SfuI	TTCGAA	1 cut(s)	1551
SinI	GGWCC	2 cut(s)	23, 779
SmlI	CTYRAG	1 cut(s)	263
SmoI	CTYRAG	1 cut(s)	263
SpeI	ACTAGT	1 cut(s)	895
SphI	GCATGC	1 cut(s)	908
SseBI	AGGCCT	2 cut(s)	1546, 1699
SsiI	CCGC	1 cut(s)	1708
SspDI	GGCGCC	1 cut(s)	735
SspI	AATATT	2 cut(s)	700, 1389
SspMI	CTAG	9 cut(s)	407, 539, 896, 1329, 1436, 1494, 1569, 1578, 1734
StuI	AGGCCT	2 cut(s)	1546, 1699
StyD4I	CCNGG	5 cut(s)	606, 686, 775, 1371, 1688
StyI	CCWWGG	2 cut(s)	754, 1063
TaaI	ACNGT	2 cut(s)	508, 622
TaiI	ACGT	5 cut(s)	82, 773, 853, 883, 1033
TaqI	TCGA	5 cut(s)	151, 285, 1187, 1287, 1551
TauI	GCSGC	1 cut(s)	1711
TfiI	GAWTC	4 cut(s)	672, 929, 935, 1220
Tru1I	TTAA	5 cut(s)	555, 615, 822, 1008, 1401
Tru9I	TTAA	5 cut(s)	555, 615, 822, 1008, 1401
TscAI	CASTG	5 cut(s)	307, 625, 821, 931, 1476
TseFI	GTSAC	1 cut(s)	267
TseI	GCWGC	4 cut(s)	200, 901, 983, 1022
Tsp45I	GTSAC	1 cut(s)	267
TspDTI	ATGAA	8 cut(s)	500, 578, 840, 885, 1154, 1169, 1201, 1572
TspGWI	ACGGA	1 cut(s)	684
TspRI	CASTG	5 cut(s)	307, 625, 821, 931, 1476
VpaK11BI	GGWCC	2 cut(s)	23, 779
XagI	CCTNNNNNAGG	1 cut(s)	1693
XapI	RAATTY	3 cut(s)	425, 1357, 1668
XbaI	TCTAGA	1 cut(s)	1493
XceI	RCATGY	3 cut(s)	275, 908, 1445
XmnI	GAANNNNTTC	4 cut(s)	852, 947, 1144, 1381
XspI	CTAG	9 cut(s)	407, 539, 896, 1329, 1436, 1494, 1569, 1578, 1734

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.