pycom11g03950

Bis(5'-adenosyl)-triphosphatase-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Reverse (-)
3099035 .. 3100467
1433 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g03950.3

Sequence Viewer

Length: 387 bp
ATGTGTAGAGAGCATCAGTTCAAGTCAAGTCAAAAGCGTAAAATGCCGTTCTCGACGGTGGCTTCCACTGTTAGATCTCTCATTACACGATCGTCCTCAGTCGCCAGAGCTGCCTTCCTTCCTCCTTCCTCCTTCTCCACCTCCGCCAAGAAGCCACCAATTCCGACCCTTTCTTCTTCCCTGACCTCCGCCTCCGGCGCCATTCGTTATACTTTGTTTATAAAACCCAAACAGATGGCTTCGCAGATGTCTTCGGAGAGCTTCAAGTTCGGGCCGTACAAGATCGACGGGAGGGGAGTGTTCTACACCACCAAGCTATCCTACGCCATGGTTAACCTGCGGCCTCTTGTTCCTGCCTGTACATGTGCTTGTCTGCCCAAGGCGTGA

Protein Analysis

129

Amino Acids

13.97

Weight (kDa)

10.43

Isoelectric Point (pI)

68.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 221
Acc36I ACCTGC 1 cut(s) 345
AccB1I GGYRCC 1 cut(s) 197
AciI CCGC 3 cut(s) 144, 189, 340
AcyI GRCGYC 1 cut(s) 198
AfaI GTAC 2 cut(s) 278, 361
AflIII ACRYGT 1 cut(s) 362
AgsI TTSAA 2 cut(s) 22, 265
AluBI AGCT 3 cut(s) 110, 261, 316
AluI AGCT 3 cut(s) 110, 261, 316
AoxI GGCC 2 cut(s) 272, 341
ApeKI GCWGC 1 cut(s) 110
AspLEI GCGC 1 cut(s) 200
AspS9I GGNCC 1 cut(s) 272
BanI GGYRCC 1 cut(s) 197
BbsI GAAGAC 1 cut(s) 243
BbvI GCAGC 1 cut(s) 97
BccI CCATC 1 cut(s) 229
BceAI ACGGC 2 cut(s) 31, 259
BfoI RGCGCY 1 cut(s) 201
BfuAI ACCTGC 1 cut(s) 345
BglII AGATCT 1 cut(s) 74
BisI GCNGC 2 cut(s) 111, 341
BlsI GCNGC 2 cut(s) 112, 342
BmgT120I GGNCC 1 cut(s) 272
BmiI GGNNCC 1 cut(s) 199
BmsI GCATC 1 cut(s) 22
BpiI GAAGAC 1 cut(s) 243
BsaHI GRCGYC 1 cut(s) 198
BsaJI CCNNGG 2 cut(s) 327, 378
BseDI CCNNGG 2 cut(s) 327, 378
BseMII CTCAG 1 cut(s) 111
BseXI GCAGC 1 cut(s) 97
Bsh1285I CGRYCG 1 cut(s) 92
BshFI GGCC 2 cut(s) 274, 343
BshNI GGYRCC 1 cut(s) 197
BsiEI CGRYCG 1 cut(s) 92
BsiSI CCGG 1 cut(s) 195
BsnI GGCC 2 cut(s) 274, 343
Bsp1407I TGTACA 1 cut(s) 359
Bsp143I GATC 3 cut(s) 74, 89, 282
Bsp19I CCATGG 1 cut(s) 327
BspACI CCGC 3 cut(s) 144, 189, 340
BspANI GGCC 2 cut(s) 274, 343
BspCNI CTCAG 1 cut(s) 110
BspLI GGNNCC 1 cut(s) 199
BspMI ACCTGC 1 cut(s) 345
BspT107I GGYRCC 1 cut(s) 197
BsrGI TGTACA 1 cut(s) 359
BssECI CCNNGG 2 cut(s) 327, 378
BssMI GATC 3 cut(s) 74, 89, 282
BssNI GRCGYC 1 cut(s) 198
BssT1I CCWWGG 2 cut(s) 327, 378
Bst4CI ACNGT 2 cut(s) 58, 70
BstACI GRCGYC 1 cut(s) 198
BstAUI TGTACA 1 cut(s) 359
BstDEI CTNAG 1 cut(s) 97
BstDSI CCRYGG 1 cut(s) 327
BstH2I RGCGCY 1 cut(s) 201
BstHHI GCGC 1 cut(s) 200
BstKTI GATC 3 cut(s) 77, 92, 285
BstMBI GATC 3 cut(s) 74, 89, 282
BstMCI CGRYCG 1 cut(s) 92
BstMWI GCNNNNNNNGC 3 cut(s) 43, 110, 197
BstNSI RCATGY 1 cut(s) 366
BstV1I GCAGC 1 cut(s) 97
BstV2I GAAGAC 1 cut(s) 243
BstX2I RGATCY 1 cut(s) 74
BstXI CCANNNNNNTGG 1 cut(s) 235
BstYI RGATCY 1 cut(s) 74
BsuRI GGCC 2 cut(s) 274, 343
BtgI CCRYGG 1 cut(s) 327
BtsIMutI CAGTG 1 cut(s) 66
BveI ACCTGC 1 cut(s) 345
CfoI GCGC 1 cut(s) 200
Cfr13I GGNCC 1 cut(s) 272
Csp6I GTAC 2 cut(s) 277, 360
CviAII CATG 2 cut(s) 328, 363
CviJI RGCY 8 cut(s) 62, 110, 154, 239, 261, 274, 316, 343
CviKI_1 RGCY 8 cut(s) 62, 110, 154, 239, 261, 274, 316, 343
CviQI GTAC 2 cut(s) 277, 360
DdeI CTNAG 1 cut(s) 97
DinI GGCGCC 1 cut(s) 199
DpnI GATC 3 cut(s) 76, 91, 284
DpnII GATC 3 cut(s) 74, 89, 282
EciI GGCGGA 2 cut(s) 133, 178
Eco130I CCWWGG 2 cut(s) 327, 378
EcoT14I CCWWGG 2 cut(s) 327, 378
EgeI GGCGCC 1 cut(s) 199
EheI GGCGCC 1 cut(s) 199
ErhI CCWWGG 2 cut(s) 327, 378
FaeI CATG 2 cut(s) 331, 366
FaiI YATR 4 cut(s) 210, 221, 329, 364
FatI CATG 2 cut(s) 327, 362
Fnu4HI GCNGC 2 cut(s) 111, 341
Fsp4HI GCNGC 2 cut(s) 111, 341
GlaI GCGC 1 cut(s) 199
GluI GCNGC 2 cut(s) 111, 341
HaeII RGCGCY 1 cut(s) 201
HaeIII GGCC 2 cut(s) 274, 343
HapII CCGG 1 cut(s) 195
HhaI GCGC 1 cut(s) 200
Hin1I GRCGYC 1 cut(s) 198
Hin1II CATG 2 cut(s) 331, 366
Hin6I GCGC 1 cut(s) 198
HinP1I GCGC 1 cut(s) 198
HincII GTYRAC 1 cut(s) 334
HindII GTYRAC 1 cut(s) 334
HpaI GTTAAC 1 cut(s) 334
HpaII CCGG 1 cut(s) 195
Hpy166II GTNNAC 1 cut(s) 334
Hpy188I TCNGA 2 cut(s) 165, 256
Hpy188III TCNNGA 1 cut(s) 52
Hpy8I GTNNAC 1 cut(s) 334
Hpy99I CGWCG 2 cut(s) 58, 290
HpyAV CCTTC 4 cut(s) 124, 128, 135, 142
HpyCH4III ACNGT 2 cut(s) 58, 70
HpyF10VI GCNNNNNNNGC 3 cut(s) 43, 110, 197
HpyF3I CTNAG 1 cut(s) 97
Hsp92I GRCGYC 1 cut(s) 198
Hsp92II CATG 2 cut(s) 331, 366
HspAI GCGC 1 cut(s) 198
KasI GGCGCC 1 cut(s) 197
KspAI GTTAAC 1 cut(s) 334
Kzo9I GATC 3 cut(s) 74, 89, 282
LpnPI CCDG 6 cut(s) 118, 194, 208, 350, 366, 370
Lsp1109I GCAGC 1 cut(s) 97
LweI GCATC 1 cut(s) 22
MalI GATC 3 cut(s) 76, 91, 284
MboI GATC 3 cut(s) 74, 89, 282
MboII GAAGA 3 cut(s) 165, 168, 243
MflI RGATCY 1 cut(s) 74
MluCI AATT 1 cut(s) 159
Mly113I GGCGCC 1 cut(s) 198
MmeI TCCRAC 1 cut(s) 188
MnlI CCTC 8 cut(s) 106, 132, 139, 151, 196, 202, 285, 354
MseI TTAA 1 cut(s) 333
MspI CCGG 1 cut(s) 195
MwoI GCNNNNNNNGC 3 cut(s) 43, 110, 197
NarI GGCGCC 1 cut(s) 198
NcoI CCATGG 1 cut(s) 327
NdeII GATC 3 cut(s) 74, 89, 282
NlaIII CATG 2 cut(s) 331, 366
NlaIV GGNNCC 1 cut(s) 199
NspI RCATGY 1 cut(s) 366
PciI ACATGT 1 cut(s) 362
PkrI GCNGC 2 cut(s) 112, 342
Ple19I CGATCG 1 cut(s) 92
PluTI GGCGCC 1 cut(s) 201
PscI ACATGT 1 cut(s) 362
PsiI TTATAA 1 cut(s) 221
PspN4I GGNNCC 1 cut(s) 199
PspPI GGNCC 1 cut(s) 272
PsuI RGATCY 1 cut(s) 74
PvuI CGATCG 1 cut(s) 92
RsaI GTAC 2 cut(s) 278, 361
RsaNI GTAC 2 cut(s) 277, 360
SaqAI TTAA 1 cut(s) 333
SatI GCNGC 2 cut(s) 111, 341
Sau3AI GATC 3 cut(s) 74, 89, 282
Sau96I GGNCC 1 cut(s) 272
SetI ASST 6 cut(s) 112, 143, 188, 263, 318, 339
SfaNI GCATC 1 cut(s) 22
SfoI GGCGCC 1 cut(s) 199
Sse9I AATT 1 cut(s) 159
SsiI CCGC 3 cut(s) 144, 189, 340
SspDI GGCGCC 1 cut(s) 197
StyI CCWWGG 2 cut(s) 327, 378
TaaI ACNGT 2 cut(s) 58, 70
TaqI TCGA 2 cut(s) 53, 285
TasI AATT 1 cut(s) 159
TatI WGTACW 1 cut(s) 359
TauI GCSGC 1 cut(s) 343
Tru1I TTAA 1 cut(s) 333
Tru9I TTAA 1 cut(s) 333
TscAI CASTG 1 cut(s) 73
TseI GCWGC 1 cut(s) 110
TspRI CASTG 1 cut(s) 73
XceI RCATGY 1 cut(s) 366
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.