RchiOBHm_Chr2g0136141

Bis(5'-adenosyl)-triphosphatase-like

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Reverse (-)
53396172 .. 53397521
1350 bp
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UTR
Exon/CDS
Intron
PRQ50696

Sequence Viewer

Length: 201 bp
ATGGCTTTGGAATCCCATTCATTTGGATCGTACAAAATTGACAGCAGGGAAGTGTTTTACGACACTAATCTATCGGATGCCTTGGTTAATTTGCGCTCTGTTGTTTCTGGGGGCAAGGAGTATAGAAACTGTCCACGGACTTTCTGGTCTTACTTTGGTTTGTATTGCAGTCTCCTATTGGTTTTCTTTCTTCTCTTTTAG

Protein Analysis

66

Amino Acids

7.67

Weight (kDa)

6.52

Isoelectric Point (pI)

35.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 145
AclWI GGATC 1 cut(s) 34
AfaI GTAC 1 cut(s) 32
Alw26I GTCTC 1 cut(s) 176
AlwI GGATC 1 cut(s) 34
AspLEI GCGC 1 cut(s) 96
BcoDI GTCTC 1 cut(s) 176
BmsI GCATC 1 cut(s) 67
BsaJI CCNNGG 2 cut(s) 81, 134
BseDI CCNNGG 2 cut(s) 81, 134
BseGI GGATG 1 cut(s) 82
BsmAI GTCTC 1 cut(s) 176
Bsp143I GATC 1 cut(s) 26
BspPI GGATC 1 cut(s) 34
BssECI CCNNGG 2 cut(s) 81, 134
BssMI GATC 1 cut(s) 26
BssT1I CCWWGG 1 cut(s) 81
Bst4CI ACNGT 1 cut(s) 131
BstDSI CCRYGG 1 cut(s) 134
BstF5I GGATG 1 cut(s) 82
BstHHI GCGC 1 cut(s) 96
BstKTI GATC 1 cut(s) 29
BstMAI GTCTC 1 cut(s) 176
BstMBI GATC 1 cut(s) 26
BstXI CCANNNNNNTGG 1 cut(s) 23
BtgI CCRYGG 1 cut(s) 134
BtsCI GGATG 1 cut(s) 82
CfoI GCGC 1 cut(s) 96
Csp6I GTAC 1 cut(s) 31
CviJI RGCY 1 cut(s) 5
CviKI_1 RGCY 1 cut(s) 5
CviQI GTAC 1 cut(s) 31
DpnI GATC 1 cut(s) 28
DpnII GATC 1 cut(s) 26
DrdI GACNNNNNNGTC 1 cut(s) 145
DseDI GACNNNNNNGTC 1 cut(s) 145
Eco130I CCWWGG 1 cut(s) 81
EcoT14I CCWWGG 1 cut(s) 81
ErhI CCWWGG 1 cut(s) 81
FaiI YATR 1 cut(s) 123
FokI GGATG 1 cut(s) 89
GlaI GCGC 1 cut(s) 95
HhaI GCGC 1 cut(s) 96
Hin6I GCGC 1 cut(s) 94
HinP1I GCGC 1 cut(s) 94
HinfI GANTC 1 cut(s) 11
Hpy166II GTNNAC 1 cut(s) 134
Hpy188I TCNGA 1 cut(s) 76
Hpy8I GTNNAC 1 cut(s) 134
HpyCH4III ACNGT 1 cut(s) 131
HpyCH4V TGCA 1 cut(s) 168
HspAI GCGC 1 cut(s) 94
Kzo9I GATC 1 cut(s) 26
LpnPI CCDG 3 cut(s) 31, 93, 130
LweI GCATC 1 cut(s) 67
MalI GATC 1 cut(s) 28
MboI GATC 1 cut(s) 26
MboII GAAGA 1 cut(s) 182
MluCI AATT 2 cut(s) 36, 88
MseI TTAA 1 cut(s) 87
NdeII GATC 1 cut(s) 26
PfeI GAWTC 1 cut(s) 11
RsaI GTAC 1 cut(s) 32
RsaNI GTAC 1 cut(s) 31
SaqAI TTAA 1 cut(s) 87
Sau3AI GATC 1 cut(s) 26
SfaNI GCATC 1 cut(s) 67
SgeI CNNG 6 cut(s) 58, 94, 120, 127, 147, 157
Sse9I AATT 2 cut(s) 36, 88
StyI CCWWGG 1 cut(s) 81
TaaI ACNGT 1 cut(s) 131
TasI AATT 2 cut(s) 36, 88
TfiI GAWTC 1 cut(s) 11
Tru1I TTAA 1 cut(s) 87
Tru9I TTAA 1 cut(s) 87
TspDTI ATGAA 1 cut(s) 9
TspGWI ACGGA 1 cut(s) 151
XcmI CCANNNNNNNNNTGG 1 cut(s) 141
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.