Rmu_sc0004053.1_g000010

Bis(5'-adenosyl)-triphosphatase-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004053.1
Physical Location & Seq
Reverse (-)
49178 .. 51007
1830 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004053.1_g000010.1.cds

Sequence Viewer

Length: 333 bp
atggtgtttcgggttcagtcaaggcattgttttgtgaagcgctttgctgatctcactgttgatgagaccagtgatctttggatcacagcacaaaaggttggcagtcggcttgagagctaccacaaagcaacatctctaacatttgggattcaagatggtccccaggcagggcagactgtaccccatgttcatatccatatccttccacgcaaagatgatacacttgatgaaaaggagaagaagaagaagcttgacttggaaaaggagaggaaggacagaagcctagaggaaatgacacaagaagcagaggaatacagaaagcttttcttgtag

Protein Analysis

110

Amino Acids

12.93

Weight (kDa)

6.97

Isoelectric Point (pI)

48.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 89
AfaI GTAC 1 cut(s) 180
AfeI AGCGCT 1 cut(s) 41
AfiI CCNNNNNNNGG 2 cut(s) 167, 168
AgsI TTSAA 1 cut(s) 152
AjnI CCWGG 1 cut(s) 162
AjuI GAANNNNNNNTTGG 2 cut(s) 239, 271
AluBI AGCT 3 cut(s) 117, 250, 322
AluI AGCT 3 cut(s) 117, 250, 322
Alw26I GTCTC 1 cut(s) 59
AlwI GGATC 1 cut(s) 89
Aor51HI AGCGCT 1 cut(s) 41
AspLEI GCGC 1 cut(s) 42
AspS9I GGNCC 1 cut(s) 158
AvaII GGWCC 1 cut(s) 158
BccI CCATC 1 cut(s) 149
BciT130I CCWGG 1 cut(s) 164
BcoDI GTCTC 1 cut(s) 59
BfaI CTAG 1 cut(s) 284
BfoI RGCGCY 1 cut(s) 43
Bme1390I CCNGG 1 cut(s) 164
Bme18I GGWCC 1 cut(s) 158
BmgT120I GGNCC 1 cut(s) 158
BmiI GGNNCC 1 cut(s) 160
BmrFI CCNGG 1 cut(s) 164
BpuEI CTTGAG 1 cut(s) 131
BsaI GGTCTC 1 cut(s) 59
BsaJI CCNNGG 1 cut(s) 162
Bsc4I CCNNNNNNNGG 2 cut(s) 167, 168
Bse1I ACTGG 1 cut(s) 69
BseBI CCWGG 1 cut(s) 164
BseDI CCNNGG 1 cut(s) 162
BseLI CCNNNNNNNGG 2 cut(s) 167, 168
BseNI ACTGG 1 cut(s) 69
BslFI GGGAC 1 cut(s) 144
BslI CCNNNNNNNGG 2 cut(s) 167, 168
BsmAI GTCTC 1 cut(s) 59
BsmFI GGGAC 1 cut(s) 144
Bso31I GGTCTC 1 cut(s) 59
Bsp143I GATC 3 cut(s) 49, 73, 81
BspLI GGNNCC 1 cut(s) 160
BspPI GGATC 1 cut(s) 89
BspTNI GGTCTC 1 cut(s) 59
BsrI ACTGG 1 cut(s) 69
BssECI CCNNGG 1 cut(s) 162
BssMI GATC 3 cut(s) 49, 73, 81
Bst2UI CCWGG 1 cut(s) 164
Bst4CI ACNGT 2 cut(s) 58, 178
BstH2I RGCGCY 1 cut(s) 43
BstHHI GCGC 1 cut(s) 42
BstKTI GATC 3 cut(s) 52, 76, 84
BstMAI GTCTC 1 cut(s) 59
BstMBI GATC 3 cut(s) 49, 73, 81
BstNI CCWGG 1 cut(s) 164
BstSCI CCNGG 1 cut(s) 162
BtsIMutI CAGTG 2 cut(s) 54, 76
CfoI GCGC 1 cut(s) 42
Cfr13I GGNCC 1 cut(s) 158
Csp6I GTAC 1 cut(s) 179
CviAII CATG 1 cut(s) 185
CviJI RGCY 5 cut(s) 109, 117, 250, 282, 322
CviKI_1 RGCY 5 cut(s) 109, 117, 250, 282, 322
CviQI GTAC 1 cut(s) 179
DpnI GATC 3 cut(s) 51, 75, 83
DpnII GATC 3 cut(s) 49, 73, 81
Eco31I GGTCTC 1 cut(s) 59
Eco47I GGWCC 1 cut(s) 158
Eco47III AGCGCT 1 cut(s) 41
EcoRII CCWGG 1 cut(s) 162
FaeI CATG 1 cut(s) 188
FaiI YATR 3 cut(s) 186, 192, 198
FalI AAGNNNNNCTT 3 cut(s) 239, 271, 311
FaqI GGGAC 1 cut(s) 144
FatI CATG 1 cut(s) 184
FspBI CTAG 1 cut(s) 284
GlaI GCGC 1 cut(s) 41
HaeII RGCGCY 1 cut(s) 43
HhaI GCGC 1 cut(s) 42
Hin1II CATG 1 cut(s) 188
Hin6I GCGC 1 cut(s) 40
HinP1I GCGC 1 cut(s) 40
HindIII AAGCTT 2 cut(s) 248, 320
HinfI GANTC 1 cut(s) 148
Hpy188III TCNNGA 1 cut(s) 152
HpyAV CCTTC 2 cut(s) 212, 265
HpyCH4III ACNGT 2 cut(s) 58, 178
Hsp92II CATG 1 cut(s) 188
HspAI GCGC 1 cut(s) 40
Kzo9I GATC 3 cut(s) 49, 73, 81
LpnPI CCDG 4 cut(s) 82, 149, 153, 176
MaeI CTAG 1 cut(s) 284
MalI GATC 3 cut(s) 51, 75, 83
MboI GATC 3 cut(s) 49, 73, 81
MboII GAAGA 3 cut(s) 250, 253, 256
MnlI CCTC 3 cut(s) 261, 280, 301
MspR9I CCNGG 1 cut(s) 164
MvaI CCWGG 1 cut(s) 164
NdeII GATC 3 cut(s) 49, 73, 81
NlaIII CATG 1 cut(s) 188
NlaIV GGNNCC 1 cut(s) 160
PfeI GAWTC 1 cut(s) 148
Psp6I CCWGG 1 cut(s) 162
PspGI CCWGG 1 cut(s) 162
PspN4I GGNNCC 1 cut(s) 160
PspPI GGNCC 1 cut(s) 158
PsrI GAACNNNNNNTAC 2 cut(s) 171, 203
RsaI GTAC 1 cut(s) 180
RsaNI GTAC 1 cut(s) 179
Sau3AI GATC 3 cut(s) 49, 73, 81
Sau96I GGNCC 1 cut(s) 158
ScrFI CCNGG 1 cut(s) 164
SetI ASST 4 cut(s) 99, 119, 252, 324
SinI GGWCC 1 cut(s) 158
SmlI CTYRAG 1 cut(s) 110
SmoI CTYRAG 1 cut(s) 110
SspMI CTAG 1 cut(s) 284
StyD4I CCNGG 1 cut(s) 162
TaaI ACNGT 2 cut(s) 58, 178
TfiI GAWTC 1 cut(s) 148
TscAI CASTG 2 cut(s) 61, 76
TspDTI ATGAA 2 cut(s) 179, 243
TspRI CASTG 2 cut(s) 61, 76
VpaK11BI GGWCC 1 cut(s) 158
XspI CTAG 1 cut(s) 284
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.