pycom11g09620

Protein of unknown function (DUF1635)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0002977
Physical Location & Seq
Forward (+)
7894900 .. 7897756
2857 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g09620.1

Sequence Viewer

Length: 1206 bp
ATGGAGGCGCATTACTCTCATCGTGCTCCGCCGCTATACAAAAACACGTCTCATCAAGACATGGTGAGCCGCCGGAGGAAATATTTCATTTTAAAAAGGGGTATTTATGGGAAGTTACCATATACAAACAAAGTAAAACCGCGTAAAATCCTCCACTCAAAAAAACAGCAAATCTCTGATTTTCCTCTTCCTTTCCTCCTCCCTTCTTCCACTTTTCTCACCAGAGAGGTTGAAACTCTTCCAATGGAGGAACCGGGTTCTATGTGGACTACTTACCCTGAGAGCGCTGATCAGTTGAAGGAGAAGCTTCTGTACACAACCCTTGAGCTAGAATCTGTAAAAACACGCGCAACGGATGAAATCCGAAAAAGCGAGGAGAATGTGGAGAAACTAGTCAATCTTCTAAACGTTGCATCCAAAGAGAGAGATGATGCCGTAGATCAGCTACGAAAGCTGGTAAACAAGATCATGCCTTCAGGTCCAATGGAACTCCCACTCAACATGTTTCCTCATGAAAGTACACTTTTGCTTCCCACCAAAGCAAACTCGAGCATAACTGAATCCAACAGCCTCTCTGAAACCTACAATCCCCAAAAATCGCATGTCTCTTCCTCTGTGGACTCCTTATTCGATGCAGTTTCTTCACCCGAGTTTTCGAACATAAACATGGCTGAATCTGGCTGCATTCCTTTTGTGAAGCACCAGCCTCGGGTGCAAGAATATAATGGTACTGTATCTGCTGGTGTAGTCTCTTCAGGGATGATCAAACCCGACCCGGCTTCTGAAGTGATTGACAACTTTGTGAAAGGAAAGATTTTGCCTGAACAGGGAAAGCTCTTGCAGACTGTGATGGAAGCCGGTCCACTGCTCGAGACTCTTCTTGTTGCTGGGCCAATGCCTCGTTGGCGAAACCCCCCGCCTTTGCAGCCCTTCAAAATCCCACCTGTTTCAATCAAAGGCTGTGAAGCTGCTGTAAGCTTCAACCAGAAACCAGTGGGAAATACTAGTTATGTTGTCCATAAGCCAATCAACTCGGCATCATATCCTGAGATGTCTCGCGGCTTGTCGCAGACATGTTCGGCTTCCATGTTGAACTTCAACAATGGTGGTGCTTCCATTTCACGCCTGAACAATGCAAGGATGTTGGCTTCGCTTTCCGGCATTGACCACCAATTTTCGATTGGCAAGCGGCAGAGGCTTCAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1635

Protein Analysis

402

Amino Acids

44.68

Weight (kDa)

9.25

Isoelectric Point (pI)

45.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1635 PF07795 95 - 336 1.1e-47 Protein of unknown function (DUF1635)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 3 cut(s) 142, 348, 1059
AciI CCGC 7 cut(s) 29, 32, 70, 140, 917, 1059, 1189
AclI AACGTT 1 cut(s) 408
AcuI CTGAAG 3 cut(s) 459, 738, 804
AfaI GTAC 3 cut(s) 314, 520, 730
AfeI AGCGCT 1 cut(s) 286
AfiI CCNNNNNNNGG 2 cut(s) 709, 827
AflIII ACRYGT 3 cut(s) 45, 501, 1073
AgsI TTSAA 8 cut(s) 233, 298, 934, 951, 982, 1093, 1099, 1202
AhlI ACTAGT 2 cut(s) 391, 1004
AjiI CACGTC 1 cut(s) 48
AluBI AGCT 7 cut(s) 307, 328, 445, 454, 835, 968, 978
AluI AGCT 7 cut(s) 307, 328, 445, 454, 835, 968, 978
Alw21I GWGCWC 1 cut(s) 28
Alw26I GTCTC 5 cut(s) 54, 610, 754, 866, 1059
Ama87I CYCGRG 4 cut(s) 547, 647, 708, 869
Aor51HI AGCGCT 1 cut(s) 286
AoxI GGCC 1 cut(s) 890
ApeKI GCWGC 3 cut(s) 681, 925, 968
ArsI GACNNNNNNTTYG 2 cut(s) 611, 643
Asp700I GAANNNNTTC 2 cut(s) 83, 237
AspLEI GCGC 3 cut(s) 10, 287, 350
AspS9I GGNCC 3 cut(s) 479, 860, 890
AsuC2I CCSGG 2 cut(s) 255, 776
AsuHPI GGTGA 3 cut(s) 76, 211, 636
AsuII TTCGAA 1 cut(s) 656
AvaI CYCGRG 4 cut(s) 547, 647, 708, 869
AvaII GGWCC 2 cut(s) 479, 860
BarI GAAGNNNNNNTAC 2 cut(s) 296, 328
Bbv12I GWGCWC 1 cut(s) 28
BbvI GCAGC 3 cut(s) 668, 937, 955
BccI CCATC 1 cut(s) 844
BceAI ACGGC 1 cut(s) 419
BcgI CGANNNNNNTGC 2 cut(s) 689, 723
BclI TGATCA 2 cut(s) 289, 762
BcnI CCSGG 2 cut(s) 255, 776
BcoDI GTCTC 5 cut(s) 54, 610, 754, 866, 1059
BcuI ACTAGT 2 cut(s) 391, 1004
BfaI CTAG 3 cut(s) 329, 392, 1005
BfoI RGCGCY 1 cut(s) 288
BglI GCCNNNNNGGC 1 cut(s) 904
BisI GCNGC 7 cut(s) 32, 70, 682, 926, 969, 1060, 1190
BlsI GCNGC 7 cut(s) 33, 71, 683, 927, 970, 1061, 1191
Bme1390I CCNGG 2 cut(s) 255, 776
Bme18I GGWCC 2 cut(s) 479, 860
BmeT110I CYCGRG 4 cut(s) 547, 647, 708, 869
BmgBI CACGTC 1 cut(s) 48
BmgT120I GGNCC 3 cut(s) 479, 860, 890
BmiI GGNNCC 1 cut(s) 252
BmrFI CCNGG 2 cut(s) 255, 776
BmsI GCATC 4 cut(s) 421, 422, 622, 1046
Bpu14I TTCGAA 1 cut(s) 656
BpuEI CTTGAG 1 cut(s) 344
BpuMI CCSGG 2 cut(s) 255, 776
BsaJI CCNNGG 1 cut(s) 707
Bsc4I CCNNNNNNNGG 2 cut(s) 709, 827
Bse118I RCCGGY 1 cut(s) 857
Bse1I ACTGG 1 cut(s) 992
BseDI CCNNGG 1 cut(s) 707
BseGI GGATG 4 cut(s) 361, 413, 765, 1146
BseLI CCNNNNNNNGG 2 cut(s) 709, 827
BseMII CTCAG 2 cut(s) 270, 1038
BseNI ACTGG 1 cut(s) 992
BseRI GAGGAG 2 cut(s) 188, 389
BseXI GCAGC 3 cut(s) 668, 937, 955
BseYI CCCAGC 1 cut(s) 887
Bsh1236I CGCG 3 cut(s) 142, 348, 1059
BshFI GGCC 1 cut(s) 892
BsiHKAI GWGCWC 1 cut(s) 28
BsiHKCI CYCGRG 4 cut(s) 547, 647, 708, 869
BsiSI CCGG 5 cut(s) 73, 254, 776, 858, 1158
BslI CCNNNNNNNGG 2 cut(s) 709, 827
BsmAI GTCTC 5 cut(s) 54, 610, 754, 866, 1059
BsmBI CGTCTC 1 cut(s) 54
BsmI GAATGC 1 cut(s) 684
BsnI GGCC 1 cut(s) 892
BsoBI CYCGRG 4 cut(s) 547, 647, 708, 869
Bsp119I TTCGAA 1 cut(s) 656
Bsp1286I GDGCHC 1 cut(s) 28
Bsp1407I TGTACA 1 cut(s) 312
Bsp143I GATC 4 cut(s) 289, 439, 465, 762
BspACI CCGC 7 cut(s) 29, 32, 70, 140, 917, 1059, 1189
BspANI GGCC 1 cut(s) 892
BspCNI CTCAG 2 cut(s) 271, 1039
BspFNI CGCG 3 cut(s) 142, 348, 1059
BspHI TCATGA 1 cut(s) 511
BspLI GGNNCC 1 cut(s) 252
BspT104I TTCGAA 1 cut(s) 656
BsrFI RCCGGY 1 cut(s) 857
BsrGI TGTACA 1 cut(s) 312
BsrI ACTGG 1 cut(s) 992
BssAI RCCGGY 1 cut(s) 857
BssECI CCNNGG 1 cut(s) 707
BssMI GATC 4 cut(s) 289, 439, 465, 762
Bst4CI ACNGT 2 cut(s) 733, 847
Bst6I CTCTTC 5 cut(s) 192, 243, 613, 757, 882
BstAUI TGTACA 1 cut(s) 312
BstBI TTCGAA 1 cut(s) 656
BstC8I GCNNGC 1 cut(s) 1187
BstDEI CTNAG 2 cut(s) 279, 1047
BstF5I GGATG 4 cut(s) 361, 413, 765, 1146
BstFNI CGCG 3 cut(s) 142, 348, 1059
BstH2I RGCGCY 1 cut(s) 288
BstHHI GCGC 3 cut(s) 10, 287, 350
BstKTI GATC 4 cut(s) 292, 442, 468, 765
BstMAI GTCTC 5 cut(s) 54, 610, 754, 866, 1059
BstMBI GATC 4 cut(s) 289, 439, 465, 762
BstMWI GCNNNNNNNGC 5 cut(s) 451, 712, 904, 925, 1195
BstNSI RCATGY 3 cut(s) 505, 605, 1077
BstSCI CCNGG 2 cut(s) 253, 774
BstUI CGCG 3 cut(s) 142, 348, 1059
BstV1I GCAGC 3 cut(s) 668, 937, 955
BsuRI GGCC 1 cut(s) 892
BtrI CACGTC 1 cut(s) 48
BtsCI GGATG 4 cut(s) 361, 413, 765, 1146
BtsI GCAGTG 1 cut(s) 863
BtsIMutI CAGTG 2 cut(s) 863, 999
Cac8I GCNNGC 1 cut(s) 1187
CciI TCATGA 1 cut(s) 511
CfoI GCGC 3 cut(s) 10, 287, 350
Cfr10I RCCGGY 1 cut(s) 857
Cfr13I GGNCC 3 cut(s) 479, 860, 890
Csp6I GTAC 3 cut(s) 313, 519, 729
CspCI CAANNNNNGTGG 2 cut(s) 1087, 1122
CviAII CATG 8 cut(s) 61, 469, 502, 512, 602, 667, 1074, 1087
CviQI GTAC 3 cut(s) 313, 519, 729
DdeI CTNAG 2 cut(s) 279, 1047
DpnI GATC 4 cut(s) 291, 441, 467, 764
DpnII GATC 4 cut(s) 289, 439, 465, 762
DraI TTTAAA 1 cut(s) 93
Eam1104I CTCTTC 5 cut(s) 192, 243, 613, 757, 882
EarI CTCTTC 5 cut(s) 192, 243, 613, 757, 882
EciI GGCGGA 1 cut(s) 18
Eco47I GGWCC 2 cut(s) 479, 860
Eco47III AGCGCT 1 cut(s) 286
Eco57I CTGAAG 3 cut(s) 459, 738, 804
Eco88I CYCGRG 4 cut(s) 547, 647, 708, 869
Esp3I CGTCTC 1 cut(s) 54
FaeI CATG 8 cut(s) 64, 472, 505, 515, 605, 670, 1077, 1090
FatI CATG 8 cut(s) 60, 468, 501, 511, 601, 666, 1073, 1086
FauI CCCGC 1 cut(s) 924
FbaI TGATCA 2 cut(s) 289, 762
Fnu4HI GCNGC 7 cut(s) 32, 70, 682, 926, 969, 1060, 1190
FokI GGATG 4 cut(s) 368, 400, 772, 1153
Fsp4HI GCNGC 7 cut(s) 32, 70, 682, 926, 969, 1060, 1190
FspBI CTAG 3 cut(s) 329, 392, 1005
GlaI GCGC 3 cut(s) 9, 286, 349
GluI GCNGC 7 cut(s) 32, 70, 682, 926, 969, 1060, 1190
GsaI CCCAGC 1 cut(s) 891
HaeII RGCGCY 1 cut(s) 288
HaeIII GGCC 1 cut(s) 892
HapII CCGG 5 cut(s) 73, 254, 776, 858, 1158
HhaI GCGC 3 cut(s) 10, 287, 350
Hin1II CATG 8 cut(s) 64, 472, 505, 515, 605, 670, 1077, 1090
Hin6I GCGC 3 cut(s) 8, 285, 348
HinP1I GCGC 3 cut(s) 8, 285, 348
HindIII AAGCTT 2 cut(s) 305, 976
HinfI GANTC 5 cut(s) 332, 560, 620, 674, 874
HpaII CCGG 5 cut(s) 73, 254, 776, 858, 1158
HphI GGTGA 3 cut(s) 76, 211, 636
Hpy166II GTNNAC 6 cut(s) 267, 315, 460, 521, 619, 863
Hpy188I TCNGA 4 cut(s) 178, 365, 577, 784
Hpy188III TCNNGA 4 cut(s) 56, 512, 871, 1046
Hpy8I GTNNAC 6 cut(s) 267, 315, 460, 521, 619, 863
HpyAV CCTTC 4 cut(s) 213, 292, 483, 940
HpyCH4III ACNGT 2 cut(s) 733, 847
HpyCH4IV ACGT 2 cut(s) 47, 408
HpyCH4V TGCA 7 cut(s) 413, 635, 684, 715, 841, 925, 1136
HpyF10VI GCNNNNNNNGC 5 cut(s) 451, 712, 904, 925, 1195
HpyF3I CTNAG 2 cut(s) 279, 1047
HpySE526I ACGT 2 cut(s) 47, 408
Hsp92II CATG 8 cut(s) 64, 472, 505, 515, 605, 670, 1077, 1090
HspAI GCGC 3 cut(s) 8, 285, 348
Ksp22I TGATCA 2 cut(s) 289, 762
Kzo9I GATC 4 cut(s) 289, 439, 465, 762
LmnI GCTCC 1 cut(s) 31
Lsp1109I GCAGC 3 cut(s) 668, 937, 955
LweI GCATC 4 cut(s) 421, 422, 622, 1046
MaeI CTAG 3 cut(s) 329, 392, 1005
MaeII ACGT 2 cut(s) 47, 408
MaeIII GTNAC 1 cut(s) 114
MalI GATC 4 cut(s) 291, 441, 467, 764
MboI GATC 4 cut(s) 289, 439, 465, 762
MboII GAAGA 8 cut(s) 179, 198, 230, 392, 600, 633, 744, 869
MhlI GDGCHC 1 cut(s) 28
MluCI AATT 1 cut(s) 1172
MlyI GAGTC 2 cut(s) 614, 868
MmeI TCCRAC 1 cut(s) 588
MroXI GAANNNNTTC 2 cut(s) 83, 237
MseI TTAA 1 cut(s) 92
MslI CAYNNNNRTG 1 cut(s) 665
MspI CCGG 5 cut(s) 73, 254, 776, 858, 1158
MspR9I CCNGG 2 cut(s) 255, 776
Mva1269I GAATGC 1 cut(s) 684
MvnI CGCG 3 cut(s) 142, 348, 1059
MwoI GCNNNNNNNGC 5 cut(s) 451, 712, 904, 925, 1195
NciI CCSGG 2 cut(s) 255, 776
NdeII GATC 4 cut(s) 289, 439, 465, 762
NlaIII CATG 8 cut(s) 64, 472, 505, 515, 605, 670, 1077, 1090
NlaIV GGNNCC 1 cut(s) 252
NmeAIII GCCGAG 1 cut(s) 1013
NspI RCATGY 3 cut(s) 505, 605, 1077
NspV TTCGAA 1 cut(s) 656
PaeR7I CTCGAG 2 cut(s) 547, 869
PagI TCATGA 1 cut(s) 511
PciI ACATGT 2 cut(s) 501, 1073
PctI GAATGC 1 cut(s) 684
PdmI GAANNNNTTC 2 cut(s) 83, 237
PfeI GAWTC 3 cut(s) 332, 560, 674
PkrI GCNGC 7 cut(s) 33, 71, 683, 927, 970, 1061, 1191
PleI GAGTC 2 cut(s) 614, 868
PpsI GAGTC 2 cut(s) 614, 868
PscI ACATGT 2 cut(s) 501, 1073
Psp1406I AACGTT 1 cut(s) 408
PspFI CCCAGC 1 cut(s) 887
PspN4I GGNNCC 1 cut(s) 252
PspPI GGNCC 3 cut(s) 479, 860, 890
PspXI VCTCGAGB 1 cut(s) 547
RsaI GTAC 3 cut(s) 314, 520, 730
RsaNI GTAC 3 cut(s) 313, 519, 729
RseI CAYNNNNRTG 1 cut(s) 665
SaqAI TTAA 1 cut(s) 92
SatI GCNGC 7 cut(s) 32, 70, 682, 926, 969, 1060, 1190
Sau3AI GATC 4 cut(s) 289, 439, 465, 762
Sau96I GGNCC 3 cut(s) 479, 860, 890
SchI GAGTC 2 cut(s) 614, 868
ScrFI CCNGG 2 cut(s) 255, 776
SduI GDGCHC 1 cut(s) 28
SfaNI GCATC 4 cut(s) 421, 422, 622, 1046
Sfr274I CTCGAG 2 cut(s) 547, 869
SfuI TTCGAA 1 cut(s) 656
SinI GGWCC 2 cut(s) 479, 860
SlaI CTCGAG 2 cut(s) 547, 869
SmiMI CAYNNNNRTG 1 cut(s) 665
SmlI CTYRAG 3 cut(s) 323, 547, 869
SmoI CTYRAG 3 cut(s) 323, 547, 869
SpeI ACTAGT 2 cut(s) 391, 1004
Sse9I AATT 1 cut(s) 1172
SsiI CCGC 7 cut(s) 29, 32, 70, 140, 917, 1059, 1189
SspI AATATT 1 cut(s) 83
SspMI CTAG 3 cut(s) 329, 392, 1005
StyD4I CCNGG 2 cut(s) 253, 774
TaaI ACNGT 2 cut(s) 733, 847
TaiI ACGT 2 cut(s) 50, 411
TaqI TCGA 5 cut(s) 548, 630, 656, 870, 1178
TasI AATT 1 cut(s) 1172
TatI WGTACW 2 cut(s) 312, 518
TauI GCSGC 4 cut(s) 34, 72, 1062, 1192
TfiI GAWTC 3 cut(s) 332, 560, 674
Tru1I TTAA 1 cut(s) 92
Tru9I TTAA 1 cut(s) 92
TscAI CASTG 2 cut(s) 870, 999
TseI GCWGC 3 cut(s) 681, 925, 968
TspDTI ATGAA 3 cut(s) 76, 372, 528
TspGWI ACGGA 1 cut(s) 368
TspRI CASTG 2 cut(s) 870, 999
VpaK11BI GGWCC 2 cut(s) 479, 860
XceI RCATGY 3 cut(s) 505, 605, 1077
XcmI CCANNNNNNNNNTGG 2 cut(s) 900, 1178
XhoI CTCGAG 2 cut(s) 547, 869
XmnI GAANNNNTTC 2 cut(s) 83, 237
XspI CTAG 3 cut(s) 329, 392, 1005
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.