pycom13g16770

N-acetyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
OG0001211
Physical Location & Seq
Reverse (-)
12534463 .. 12535235
773 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 594 bp
ATGTTATGTTTTAACCGGTCAGCTGTTTTTGTCACAATCCCAATTGAGCTTGGAACCATCTCAAACTTCCTCAAAGTTATGGAGTCCTCAAGAATTTCACTGCGTCCTTTCAGAGTCTCCGATGCTGATGACTTCTTGAAATGGGCGAGTGATGACAAAGTGACGCGCTATTTGAGATGGAACACCATAACCTCTAGGGAAGAAGCCTTGACATACATTGAGAAGGTTGCTATACCACACCCATGGCGCCAGTCCATATGTCTGGATGACCATTCGATTGGATATGTTTCGGTCAAGCCCGAAGCGGGCGATGACAAGTGTAGAGCCCATGTTAGCTATGCCGTGTCTGCAGAATACTGGGGACAAGGGATTGCCAAACAGGCACTGAGGATGGCCATGTCTAGAGTGTTCAAAGAGTTCCCATGTTTGGTGAGGGTTGAGGCTTTGGTGGAGGTTGAGAATAAGGGTTCCCAAATGGTTTTAGAGAAAGTTGGGTTTGTGAAAGAAGGTTTGTTAAGGAAGTATGGTTATTGTAAAGGTGAGATTAGAGACATGTTTATCTACAGCTTCTTATCAGCTGACAAGATTATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Acetyltransf_3

Protein Analysis

198

Amino Acids

22.6

Weight (kDa)

8.54

Isoelectric Point (pI)

31.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Acetyltransf_3 PF13302 31 - 167 1.8e-25 Acetyltransferase (GNAT) domain
Acetyltransf_4 PF13420 35 - 186 1.1e-06 Acetyltransferase (GNAT) domain
Acetyltransf_1 PF00583 80 - 166 1.4e-10 Acetyltransferase (GNAT) family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 246
AccII CGCG 1 cut(s) 166
AciI CCGC 1 cut(s) 305
AcoI YGGCCR 1 cut(s) 393
AcsI RAATTY 1 cut(s) 93
AcyI GRCGYC 1 cut(s) 247
AfiI CCNNNNNNNGG 2 cut(s) 305, 427
AflIII ACRYGT 1 cut(s) 552
AgeI ACCGGT 1 cut(s) 15
AgsI TTSAA 2 cut(s) 139, 412
AluBI AGCT 5 cut(s) 23, 49, 336, 567, 578
AluI AGCT 5 cut(s) 23, 49, 336, 567, 578
Alw26I GTCTC 2 cut(s) 121, 543
AlwNI CAGNNNCTG 1 cut(s) 385
AoxI GGCC 1 cut(s) 393
ApoI RAATTY 1 cut(s) 93
ArsI GACNNNNNNTTYG 2 cut(s) 154, 186
AsiGI ACCGGT 1 cut(s) 15
AspLEI GCGC 2 cut(s) 168, 249
AsuHPI GGTGA 2 cut(s) 442, 551
BalI TGGCCA 1 cut(s) 395
BanI GGYRCC 1 cut(s) 246
BanII GRGCYC 1 cut(s) 328
BccI CCATC 3 cut(s) 65, 171, 385
BceAI ACGGC 1 cut(s) 326
BcoDI GTCTC 2 cut(s) 121, 543
BfaI CTAG 2 cut(s) 195, 402
BfmI CTRYAG 2 cut(s) 348, 562
BfoI RGCGCY 1 cut(s) 250
BglI GCCNNNNNGGC 1 cut(s) 380
BmiI GGNNCC 3 cut(s) 55, 248, 469
BmrI ACTGGG 1 cut(s) 367
BmsI GCATC 1 cut(s) 112
BmuI ACTGGG 1 cut(s) 367
BpuEI CTTGAG 1 cut(s) 73
BsaHI GRCGYC 1 cut(s) 247
BsaJI CCNNGG 1 cut(s) 242
BsaWI WCCGGW 1 cut(s) 15
Bsc4I CCNNNNNNNGG 2 cut(s) 305, 427
Bse118I RCCGGY 1 cut(s) 15
Bse1I ACTGG 2 cut(s) 250, 362
BseDI CCNNGG 1 cut(s) 242
BseGI GGATG 2 cut(s) 271, 396
BseLI CCNNNNNNNGG 2 cut(s) 305, 427
BseMII CTCAG 1 cut(s) 377
BseNI ACTGG 2 cut(s) 250, 362
Bsh1236I CGCG 1 cut(s) 166
BshFI GGCC 1 cut(s) 395
BshNI GGYRCC 1 cut(s) 246
BshTI ACCGGT 1 cut(s) 15
BsiSI CCGG 1 cut(s) 16
BslFI GGGAC 1 cut(s) 375
BslI CCNNNNNNNGG 2 cut(s) 305, 427
BsmAI GTCTC 2 cut(s) 121, 543
BsmFI GGGAC 1 cut(s) 375
BsnI GGCC 1 cut(s) 395
Bsp1286I GDGCHC 1 cut(s) 328
Bsp19I CCATGG 1 cut(s) 242
BspACI CCGC 1 cut(s) 305
BspANI GGCC 1 cut(s) 395
BspCNI CTCAG 1 cut(s) 378
BspFNI CGCG 1 cut(s) 166
BspLI GGNNCC 3 cut(s) 55, 248, 469
BspMAI CTGCAG 1 cut(s) 352
BspT107I GGYRCC 1 cut(s) 246
BsrFI RCCGGY 1 cut(s) 15
BsrI ACTGG 2 cut(s) 250, 362
BssAI RCCGGY 1 cut(s) 15
BssECI CCNNGG 1 cut(s) 242
BssNI GRCGYC 1 cut(s) 247
BssT1I CCWWGG 1 cut(s) 242
BstACI GRCGYC 1 cut(s) 247
BstC8I GCNNGC 1 cut(s) 307
BstDEI CTNAG 1 cut(s) 386
BstDSI CCRYGG 1 cut(s) 242
BstF5I GGATG 2 cut(s) 271, 396
BstFNI CGCG 1 cut(s) 166
BstH2I RGCGCY 1 cut(s) 250
BstHHI GCGC 2 cut(s) 168, 249
BstMAI GTCTC 2 cut(s) 121, 543
BstMWI GCNNNNNNNGC 2 cut(s) 347, 380
BstNSI RCATGY 1 cut(s) 556
BstSFI CTRYAG 2 cut(s) 348, 562
BstUI CGCG 1 cut(s) 166
BstXI CCANNNNNNTGG 3 cut(s) 243, 262, 278
BsuRI GGCC 1 cut(s) 395
BtgI CCRYGG 1 cut(s) 242
BtgZI GCGATG 1 cut(s) 324
BtsCI GGATG 2 cut(s) 271, 396
BtsI GCAGTG 1 cut(s) 98
BtsIMutI CAGTG 2 cut(s) 98, 383
Cac8I GCNNGC 1 cut(s) 307
CaiI CAGNNNCTG 1 cut(s) 385
CfoI GCGC 2 cut(s) 168, 249
Cfr10I RCCGGY 1 cut(s) 15
CseI GACGC 2 cut(s) 92, 172
CspAI ACCGGT 1 cut(s) 15
CviAII CATG 5 cut(s) 243, 329, 397, 423, 553
DdeI CTNAG 1 cut(s) 386
DinI GGCGCC 1 cut(s) 248
EaeI YGGCCR 1 cut(s) 393
Eco130I CCWWGG 1 cut(s) 242
Eco24I GRGCYC 1 cut(s) 328
EcoT14I CCWWGG 1 cut(s) 242
EcoT38I GRGCYC 1 cut(s) 328
EgeI GGCGCC 1 cut(s) 248
EheI GGCGCC 1 cut(s) 248
ErhI CCWWGG 1 cut(s) 242
FaeI CATG 5 cut(s) 246, 332, 400, 426, 556
FaqI GGGAC 1 cut(s) 375
FatI CATG 5 cut(s) 242, 328, 396, 422, 552
FauI CCCGC 1 cut(s) 298
FauNDI CATATG 1 cut(s) 257
FokI GGATG 2 cut(s) 278, 403
FriOI GRGCYC 1 cut(s) 328
FspBI CTAG 2 cut(s) 195, 402
GlaI GCGC 2 cut(s) 167, 248
HaeII RGCGCY 1 cut(s) 250
HaeIII GGCC 1 cut(s) 395
HapII CCGG 1 cut(s) 16
HgaI GACGC 2 cut(s) 92, 172
HhaI GCGC 2 cut(s) 168, 249
Hin1I GRCGYC 1 cut(s) 247
Hin1II CATG 5 cut(s) 246, 332, 400, 426, 556
Hin6I GCGC 2 cut(s) 166, 247
HinP1I GCGC 2 cut(s) 166, 247
HinfI GANTC 2 cut(s) 83, 114
HpaII CCGG 1 cut(s) 16
HphI GGTGA 2 cut(s) 442, 551
Hpy188I TCNGA 2 cut(s) 113, 121
Hpy188III TCNNGA 4 cut(s) 90, 136, 263, 402
HpyAV CCTTC 2 cut(s) 217, 500
HpyCH4V TGCA 1 cut(s) 350
HpyF10VI GCNNNNNNNGC 2 cut(s) 347, 380
HpyF3I CTNAG 1 cut(s) 386
Hsp92I GRCGYC 1 cut(s) 247
Hsp92II CATG 5 cut(s) 246, 332, 400, 426, 556
HspAI GCGC 2 cut(s) 166, 247
KasI GGCGCC 1 cut(s) 246
LpnPI CCDG 5 cut(s) 29, 248, 263, 343, 365
LweI GCATC 1 cut(s) 112
MaeI CTAG 2 cut(s) 195, 402
MaeIII GTNAC 2 cut(s) 31, 160
MboII GAAGA 1 cut(s) 212
MfeI CAATTG 1 cut(s) 42
MhlI GDGCHC 1 cut(s) 328
MlsI TGGCCA 1 cut(s) 395
MluCI AATT 2 cut(s) 42, 93
MluNI TGGCCA 1 cut(s) 395
Mly113I GGCGCC 1 cut(s) 247
MlyI GAGTC 2 cut(s) 92, 123
MnlI CCTC 7 cut(s) 80, 97, 202, 381, 426, 433, 445
Mox20I TGGCCA 1 cut(s) 395
MscI TGGCCA 1 cut(s) 395
MseI TTAA 2 cut(s) 12, 515
MslI CAYNNNNRTG 1 cut(s) 241
Msp20I TGGCCA 1 cut(s) 395
MspA1I CMGCKG 2 cut(s) 23, 578
MspI CCGG 1 cut(s) 16
MunI CAATTG 1 cut(s) 42
MvnI CGCG 1 cut(s) 166
MwoI GCNNNNNNNGC 2 cut(s) 347, 380
NarI GGCGCC 1 cut(s) 247
NcoI CCATGG 1 cut(s) 242
NdeI CATATG 1 cut(s) 257
NlaIII CATG 5 cut(s) 246, 332, 400, 426, 556
NlaIV GGNNCC 3 cut(s) 55, 248, 469
NmuCI GTSAC 2 cut(s) 31, 160
NspI RCATGY 1 cut(s) 556
PciI ACATGT 1 cut(s) 552
PinAI ACCGGT 1 cut(s) 15
PleI GAGTC 2 cut(s) 91, 122
PluTI GGCGCC 1 cut(s) 250
PpsI GAGTC 2 cut(s) 91, 122
PscI ACATGT 1 cut(s) 552
PspN4I GGNNCC 3 cut(s) 55, 248, 469
PstI CTGCAG 1 cut(s) 352
PstNI CAGNNNCTG 1 cut(s) 385
PvuII CAGCTG 2 cut(s) 23, 578
RseI CAYNNNNRTG 1 cut(s) 241
SaqAI TTAA 2 cut(s) 12, 515
SchI GAGTC 2 cut(s) 92, 123
SduI GDGCHC 1 cut(s) 328
SfaNI GCATC 1 cut(s) 112
SfcI CTRYAG 2 cut(s) 348, 562
SfoI GGCGCC 1 cut(s) 248
SmiMI CAYNNNNRTG 1 cut(s) 241
SmlI CTYRAG 1 cut(s) 88
SmoI CTYRAG 1 cut(s) 88
Sse9I AATT 2 cut(s) 42, 93
SsiI CCGC 1 cut(s) 305
SspDI GGCGCC 1 cut(s) 246
SspMI CTAG 2 cut(s) 195, 402
StyI CCWWGG 1 cut(s) 242
TaqI TCGA 1 cut(s) 275
TaqII GACCGA 1 cut(s) 280
TasI AATT 2 cut(s) 42, 93
Tru1I TTAA 2 cut(s) 12, 515
Tru9I TTAA 2 cut(s) 12, 515
TscAI CASTG 2 cut(s) 105, 390
TseFI GTSAC 2 cut(s) 31, 160
Tsp45I GTSAC 2 cut(s) 31, 160
TspRI CASTG 2 cut(s) 105, 390
XapI RAATTY 1 cut(s) 93
XbaI TCTAGA 1 cut(s) 401
XceI RCATGY 1 cut(s) 556
XspI CTAG 2 cut(s) 195, 402
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.