pycom15g00870

ABC transporter B family member

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0001951
Physical Location & Seq
Reverse (-)
460681 .. 465249
4569 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 3765 bp
ATGTTTTGGGTAAAGTACAGTCAGAGGGCCGAGTTGTTGGTTGAAATGCCAACTAGTCATACAGCGTCTAACAAGTTTACTTTGTCTGTGGGCATTATGGAGGAAGTAGAGCTTGCCTCCGACAAGTTTTCGGACGGAAACCCGCTTCCGGAAATGGACAAACCAACGAACTCGACCAAGCAGCGCAGCGTGTCGTTCCTCGGACTATTCGCTGCTGCTGACAAGGTGGACTGTGTGTTGATGTTTTTGGGAAGTGTTGGGGCTTGTATCCATGGTGGTGTGCTTCCTGTGTTCTTTGTTTTATTCGGTCGCATGATCGATTCGTTAGGACATCTGGCGATGAATCCACAACAACAGTCTGCCCGGATTTCCGAGTATGCTTTGTACTTGGTATATCTTGGACTCGTTCTTTTCGCATCAGCATGGATTGGTGTAGCATTCTGGACGCGAACCGGGGAGAGGCAGACAGCTCGTTTGCGGACGAAGTATCTCCAATCAGTTCTAAACAAGGACATTAATTTTTTCGACACTGAAGCCAGAGACACCAACATTATTTTCCACATTTCAAGTGATGCAATTCTAGTGCAAGATGCAATAGGTGACAAGACTGGCCATGCTTTGCGCTACCTTTCACAGTTCCTTACTGGATTTGCGATCGGTTTTACATCGGTATGGCAGCTTACGCTTCTGACCTTGGCTGTGGTTCCTTTCATAGCTATTGCAGGTGGAGCTTATACTATAACCATGTCTACCTTATCCGAAAAGGGTGAGGCTGCTTATGCAGAAGCCGGCAAGGTTGCTGAAGAGGTTATTTCGCAGATTCGTACAGTGTACTCATTCGGGGGAGAGGACAGATCCATTGAAGCATACTCAACCTCACTGAACAAGGCCCTCAAGCTGGGAAAGAAGACCGGTGTTGCAAAAGGAGTTGGTGTAGGGTTTACATACGGGCTGTTGTTCTGCGCTTGGGCATTGCTTCTCTGGTATGCCAGCATACTTGTAAGGCATCATGACACGAACGGAGGGAAAGCATTCACAACAATCATCAATGTCATCTTCAGCGGATTTGCTCTTGGCCAAGCTGCTCCAAACCTTGCTGCAATTGCAAAAGGGAGAGCTGCTGCTGGTAATATCACGACAATGATTGATTCGGATTCCAAATCCTGTAAGGTCTCGGACAACGGAATAGTGTTGCCGAAAGTGTCTGGGCAGATTGACTTCTGTGAGGTTGGTTTCACCTATCCATCACGATCAAATATGGTGTTCGATAACTTGAGCTTTTCGATTGGAGCTGGCAAGACTTTTGCAGTTGTTGGCCCTAGTGGTTCAGGAAAGAGCACCGTTATATCCATGATTCAGCGATTCTACCATCCCGTTTCAGGTAAAATACTGTTGGATGGACATGAACTTGGAACTCTCCAACTGAAATGGTTGCGAGAACAGATGGGATTGGTAAGTCAAGAACCGGCATTGTTCGCAACTACCATAGCCGGCAACATTTTGTTAGGTAAAGAAGACGCAGACATGGATCAGATCATGGAAGCTGCTAAAGCTGCAAATGCACATTCTTTCATTGAAGGATTGCCTGATGGCTACAACACTCAGGCAGGAGAGGGAGGAACTCAGCTTTCCGGAGGGCAAAAGCAGCGAATAGCCATTGCAAGAGCAGTGCTGCGAAACCCGAAAATACTACTCTTAGATGAGGCCACAAGCGCTCTTGACGCAGAATCAGAACTAGTTGTTCAGCAGGCACTAGAGAAAATCATGTCACATCGAACTACAGTCATCGTTGCTCATCGATTGTCCACTATCCAAGATGTGGACACAATCGTTGTCTTGAAGAACGGTCAGCTTGCTGAGAGTGGCAACCATTCAGACCTGATGTCCAAGAAAGGGGAGTATGCAAATCTGGTGAGCATGCAGGTACTTGAACATGGTAAAGATTCTGGCTTAGTATCTGGACATTCTTCGAGAGAATCCAGCTTTCGTGGAACCACAAATAACTATCCGCAGGAGGACAAGGCAATCAGAACAAAACAGCAGAAGCCAAGCGATCAGACCAGCTCTGCTCCTGCACCAGTATGGGAATTAGTGAAACTAAATGCGCCCGAGTGGCCTTACGCAATACTTGGGTCAGTCGGTGCAGTTCTCGCTGGCATGGAAGCTCCTCTTTTCTCCCTCGGGATAACTCATATATTGACAGTGTTTTACACTCCTGGCGGCTCTCAAATCAAACATGTTATTGATAGGATAGCTCTCATATTTGTTGGCTTGGCTGCCGTCACTGTCCCAATATATCTCCTGCAGCACTACTTTTATACATTGATGGGGGAGCGGCTCACAACTCGCGTTCGTTTATTAATGTTCAAAGCCATCCTTTCGAACGAAGTTGGTTGGTTCGATTTGGAAGAGAATGACACCGGATCACTGACATCAACTTTAGCAGCAAATGCAACGTTGGTGCGAAGCGCTCTAGCTGACCGTCTGTCAACAATCGTGCAGAATCTCTCCCTCACGGTGACTGCTTTTGTTATTGCCTTCACGTTTAGTTGGCGTATGGCAGCTGTCGTGAGTGCCTCCCTCCCCCTACTTATCGGAGCTTCCATAACTGAGCAACTGTTTCTGAAGGGATTTGGAGGGGACTACAACCGTGCCTACTCAAAAGCAACTTCCATTGCACGCGAAGCGATTGCCAACATACGTACTGTAGCTGCTTTTGGTTGCGAAGAACGGATATCACTCCAGTTTTCCTTGGAACTAAACAAGCCAAACAAGCAAGCAGTTCTAAGAGGCCACATATCAGGCTTCTGCTACGGTTTATCGCAGTTTTTCGCATTCTGTTCTTATGCCCTTGGCCTTTGGTATGCATCAGTACTAATCAAGGATAAAGACTCGAATTTTGGAGATATCATGAAGTCCTTTATGGTCTTAATAGTCACTTCACTGTGTATAGCAGAAACCCTAGCTCTCACACCAGAAATTATGAAGGGATCGCAAGCGCTCAGCCCAATTTTCAGTATCCTAAAGCGAGAAACAGCCATACATCGTGATGATCTCAGATCAAATGTTGTTGCCAATGTCAAAGGAGATATAGAGTTTAAGAATGTGAGTTTCTGGTACCCTGCAAGGCCGGATATCACCATTTTCGACTATTTGAATTTACGGGTTTCAGCAGGAAAGAGCCTTGCTATAGTCGGGCCAAGTGGTTCGGGGAAGAGTACAGTGATTGCAGTGGTAATGAGATTTTATGACCCCATTTCTGGTACGGTTCTAATTGATGGATACGATATCAAAAGCTTGAACTTGAAATCATTGAGGAAGAGAATCAGTCTAGTTCAGCAGGAGCCGGCATTGTTCTCCACAACAATTTATGAGAACATAAAGTATGGGTACGAGGAAGCATCGGAAGTAGAGGTAGTGACAGCAGCGAAAGCAGCGAATGCACACGGTTTCATAAGTCAAATGCCTGAAGGGTACAAAACTCAGGTGGGGGAGAAAGGAGTGCAGTTATCCGGAGGGCAGAAACAGAGGGTGGCAATTGCCAGAGCAATACTGAAAGATCCATCAATTCTTCTTCTGGACGAAGCAACAAGTGCATTGGACACAGAGTCTGAGAAGCTGGTCCAAGAGGCTCTTGACAAGCTAATGGAGGGTAGAACAACGATTATGGTAGCACACCGGTTGTCAACTATTCGTGATGCAAATCGGATCGATCCCTGCTACAAAATGGTAGGGTGGTCGAAATGGGAAGCCACGAGCAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko02010 ko04976 ko05206 ko05226 map02010 map04976 map05206 map05226
Pfam Domains
Protein Families
ABC_membrane ABC_tran

Protein Analysis

1255

Amino Acids

136.3

Weight (kDa)

7.32

Isoelectric Point (pI)

33.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 82 - 353 4.7e-53 ABC transporter transmembrane region
ABC_tran PF00005 423 - 571 1.3e-33 ABC transporter
ABC_membrane PF00664 710 - 981 2.6e-50 ABC transporter transmembrane region
ABC_tran PF00005 1051 - 1198 7e-34 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 713
Acc36I ACCTGC 2 cut(s) 713, 1912
Acc65I GGTACC 1 cut(s) 3117
AccB1I GGYRCC 1 cut(s) 3117
AccB7I CCANNNNNTGG 1 cut(s) 1819
AccBSI CCGCTC 1 cut(s) 2335
AccI GTMKAC 1 cut(s) 749
AccII CGCG 3 cut(s) 448, 2349, 2682
AccIII TCCGGA 3 cut(s) 148, 1631, 3512
AciI CCGC 6 cut(s) 143, 478, 1062, 2009, 2220, 2335
AclI AACGTT 1 cut(s) 2456
AclWI GGATC 7 cut(s) 849, 1536, 2431, 2998, 3554, 3707, 3716
AcoI YGGCCR 2 cut(s) 610, 1075
AcsI RAATTY 2 cut(s) 2896, 3157
AcuI CTGAAG 5 cut(s) 552, 822, 1042, 2645, 3489
AfeI AGCGCT 3 cut(s) 1714, 2470, 3000
AfiI CCNNNNNNNGG 7 cut(s) 148, 459, 898, 1379, 1819, 1893, 3260
AflIII ACRYGT 1 cut(s) 2236
AgeI ACCGGT 2 cut(s) 911, 3678
AhdI GACNNNNNGTC 3 cut(s) 1882, 2485, 3607
AhlI ACTAGT 2 cut(s) 53, 1735
AjnI CCWGG 1 cut(s) 2215
AjuI GAANNNNNNNTTGG 2 cut(s) 539, 571
Alw21I GWGCWC 1 cut(s) 1340
Alw26I GTCTC 2 cut(s) 534, 1177
AlwI GGATC 7 cut(s) 849, 1536, 2431, 2998, 3554, 3707, 3716
AlwNI CAGNNNCTG 1 cut(s) 3611
Ama87I CYCGRG 2 cut(s) 2108, 2180
Aor13HI TCCGGA 3 cut(s) 148, 1631, 3512
Aor51HI AGCGCT 3 cut(s) 1714, 2470, 3000
ApoI RAATTY 2 cut(s) 2896, 3157
ArsI GACNNNNNNTTYG 4 cut(s) 457, 489, 2882, 2914
AseI ATTAAT 2 cut(s) 516, 2360
AsiGI ACCGGT 2 cut(s) 911, 3678
Asp700I GAANNNNTTC 1 cut(s) 1031
Asp718I GGTACC 1 cut(s) 3117
AspLEI GCGC 7 cut(s) 186, 624, 965, 1715, 2107, 2471, 3001
AspS9I GGNCC 5 cut(s) 27, 889, 1316, 3197, 3622
AsuC2I CCSGG 2 cut(s) 364, 454
AsuHPI GGTGA 6 cut(s) 611, 779, 1228, 1924, 2530, 3130
AsuII TTCGAA 1 cut(s) 2381
AvaI CYCGRG 2 cut(s) 2108, 2180
AvaII GGWCC 1 cut(s) 3622
BalI TGGCCA 2 cut(s) 612, 1077
BanI GGYRCC 1 cut(s) 3117
BauI CACGAG 1 cut(s) 3754
BbsI GAAGAC 2 cut(s) 914, 1521
Bbv12I GWGCWC 1 cut(s) 1340
BccI CCATC 9 cut(s) 1252, 1377, 1391, 1438, 1583, 2320, 2381, 3272, 3571
BceAI ACGGC 1 cut(s) 2264
BcgI CGANNNNNNTGC 4 cut(s) 452, 486, 2672, 2706
BciT130I CCWGG 1 cut(s) 2217
BciVI GTATCC 3 cut(s) 278, 3029, 3275
BcnI CCSGG 2 cut(s) 364, 454
BcoDI GTCTC 2 cut(s) 534, 1177
BcuI ACTAGT 2 cut(s) 53, 1735
BfaI CTAG 8 cut(s) 54, 581, 1320, 1736, 1754, 2474, 2963, 3332
BfmI CTRYAG 4 cut(s) 1779, 2303, 2706, 3189
BfoI RGCGCY 3 cut(s) 1716, 2472, 3002
BfuAI ACCTGC 2 cut(s) 713, 1912
BfuI GTATCC 3 cut(s) 278, 3029, 3275
BglI GCCNNNNNGGC 1 cut(s) 2113
BlpI GCTNAGC 1 cut(s) 3002
BmcAI AGTACT 1 cut(s) 2874
Bme1390I CCNGG 3 cut(s) 364, 454, 2217
Bme18I GGWCC 1 cut(s) 3622
BmeRI GACNNNNNGTC 3 cut(s) 1882, 2485, 3607
BmeT110I CYCGRG 2 cut(s) 2108, 2180
BmgT120I GGNCC 5 cut(s) 27, 889, 1316, 3197, 3622
BmiI GGNNCC 4 cut(s) 705, 1993, 3119, 3345
BmrFI CCNGG 3 cut(s) 364, 454, 2217
BmsI GCATC 7 cut(s) 425, 562, 580, 1015, 2876, 3410, 3688
BpiI GAAGAC 2 cut(s) 914, 1521
BplI GAGNNNNNCTC 2 cut(s) 101, 133
BpmI CTGGAG 1 cut(s) 2726
Bpu1102I GCTNAGC 1 cut(s) 3002
Bpu14I TTCGAA 1 cut(s) 2381
BpuEI CTTGAG 2 cut(s) 878, 1294
BpuMI CCSGG 2 cut(s) 364, 454
Bsa29I ATCGAT 3 cut(s) 318, 1798, 3711
BsaAI YACGTR 1 cut(s) 2702
BsaBI GATNNNNATC 1 cut(s) 3702
BsaI GGTCTC 1 cut(s) 1177
BsaJI CCNNGG 7 cut(s) 199, 271, 453, 693, 2179, 2751, 2851
BsaWI WCCGGW 6 cut(s) 148, 911, 1631, 2420, 3512, 3678
BsaXI ACNNNNNCTCC 2 cut(s) 918, 948
Bsc4I CCNNNNNNNGG 7 cut(s) 148, 459, 898, 1379, 1819, 1893, 3260
Bse118I RCCGGY 6 cut(s) 788, 911, 1465, 1490, 3346, 3678
Bse1I ACTGG 4 cut(s) 613, 649, 2078, 2743
Bse3DI GCAATG 3 cut(s) 971, 1656, 2673
Bse8I GATNNNNATC 1 cut(s) 3702
BseAI TCCGGA 3 cut(s) 148, 1631, 3512
BseBI CCWGG 1 cut(s) 2217
BseCI ATCGAT 3 cut(s) 318, 1798, 3711
BseDI CCNNGG 7 cut(s) 199, 271, 453, 693, 2179, 2751, 2851
BseGI GGATG 3 cut(s) 1369, 1402, 2373
BseJI GATNNNNATC 1 cut(s) 3702
BseLI CCNNNNNNNGG 7 cut(s) 148, 459, 898, 1379, 1819, 1893, 3260
BseMI GCAATG 3 cut(s) 971, 1656, 2673
BseMII CTCAG 8 cut(s) 1616, 1637, 1848, 2601, 3016, 3070, 3497, 3603
BseNI ACTGG 4 cut(s) 613, 649, 2078, 2743
BseRI GAGGAG 1 cut(s) 2157
BseYI CCCAGC 1 cut(s) 898
BsgI GTGCAG 4 cut(s) 2058, 2163, 2519, 3524
Bsh1236I CGCG 3 cut(s) 448, 2349, 2682
Bsh1285I CGRYCG 2 cut(s) 310, 657
BshNI GGYRCC 1 cut(s) 3117
BshTI ACCGGT 2 cut(s) 911, 3678
BshVI ATCGAT 3 cut(s) 318, 1798, 3711
BsiEI CGRYCG 2 cut(s) 310, 657
BsiHKAI GWGCWC 1 cut(s) 1340
BsiHKCI CYCGRG 2 cut(s) 2108, 2180
BslFI GGGAC 2 cut(s) 2273, 2654
BslI CCNNNNNNNGG 7 cut(s) 148, 459, 898, 1379, 1819, 1893, 3260
BsmAI GTCTC 2 cut(s) 534, 1177
BsmFI GGGAC 2 cut(s) 2273, 2654
BsmI GAATGC 4 cut(s) 437, 1031, 2834, 3445
Bso31I GGTCTC 1 cut(s) 1177
BsoBI CYCGRG 2 cut(s) 2108, 2180
Bsp119I TTCGAA 1 cut(s) 2381
Bsp1286I GDGCHC 1 cut(s) 1340
Bsp13I TCCGGA 3 cut(s) 148, 1631, 3512
Bsp1720I GCTNAGC 1 cut(s) 3002
Bsp19I CCATGG 1 cut(s) 271
BspACI CCGC 6 cut(s) 143, 478, 1062, 2009, 2220, 2335
BspCNI CTCAG 8 cut(s) 1615, 1636, 1849, 2602, 3015, 3069, 3496, 3604
BspDI ATCGAT 3 cut(s) 318, 1798, 3711
BspEI TCCGGA 3 cut(s) 148, 1631, 3512
BspFNI CGCG 3 cut(s) 448, 2349, 2682
BspHI TCATGA 2 cut(s) 1009, 2910
BspLI GGNNCC 4 cut(s) 705, 1993, 3119, 3345
BspMAI CTGCAG 1 cut(s) 2307
BspMI ACCTGC 2 cut(s) 713, 1912
BspPI GGATC 7 cut(s) 849, 1536, 2431, 2998, 3554, 3707, 3716
BspT104I TTCGAA 1 cut(s) 2381
BspT107I GGYRCC 1 cut(s) 3117
BspTNI GGTCTC 1 cut(s) 1177
BsrBI CCGCTC 1 cut(s) 2335
BsrDI GCAATG 3 cut(s) 971, 1656, 2673
BsrFI RCCGGY 6 cut(s) 788, 911, 1465, 1490, 3346, 3678
BsrI ACTGG 4 cut(s) 613, 649, 2078, 2743
BssAI RCCGGY 6 cut(s) 788, 911, 1465, 1490, 3346, 3678
BssECI CCNNGG 7 cut(s) 199, 271, 453, 693, 2179, 2751, 2851
BssSI CACGAG 1 cut(s) 3754
BssT1I CCWWGG 4 cut(s) 271, 693, 2751, 2851
Bst2BI CACGAG 1 cut(s) 3754
Bst2UI CCWGG 1 cut(s) 2217
Bst6I CTCTTC 4 cut(s) 798, 2403, 3209, 3314
BstAPI GCANNNNNTGC 3 cut(s) 2450, 3440, 3593
BstBAI YACGTR 1 cut(s) 2702
BstBI TTCGAA 1 cut(s) 2381
BstDSI CCRYGG 1 cut(s) 271
BstF5I GGATG 3 cut(s) 1369, 1402, 2373
BstFNI CGCG 3 cut(s) 448, 2349, 2682
BstH2I RGCGCY 3 cut(s) 1716, 2472, 3002
BstHHI GCGC 7 cut(s) 186, 624, 965, 1715, 2107, 2471, 3001
BstMAI GTCTC 2 cut(s) 534, 1177
BstMCI CGRYCG 2 cut(s) 310, 657
BstNI CCWGG 1 cut(s) 2217
BstNSI RCATGY 2 cut(s) 1921, 2240
BstSCI CCNGG 3 cut(s) 362, 452, 2215
BstSFI CTRYAG 4 cut(s) 1779, 2303, 2706, 3189
BstSNI TACGTA 1 cut(s) 2702
BstUI CGCG 3 cut(s) 448, 2349, 2682
BstV2I GAAGAC 2 cut(s) 914, 1521
BstX2I RGATCY 2 cut(s) 854, 3559
BstYI RGATCY 2 cut(s) 854, 3559
Bsu15I ATCGAT 3 cut(s) 318, 1798, 3711
BsuI GTATCC 3 cut(s) 278, 3029, 3275
BsuTUI ATCGAT 3 cut(s) 318, 1798, 3711
BtgI CCRYGG 1 cut(s) 271
BtgZI GCGATG 1 cut(s) 353
BtsCI GGATG 3 cut(s) 1369, 1402, 2373
BtsI GCAGTG 2 cut(s) 1674, 3237
BveI ACCTGC 2 cut(s) 713, 1912
CaiI CAGNNNCTG 1 cut(s) 3611
CciI TCATGA 2 cut(s) 1009, 2910
CfoI GCGC 7 cut(s) 186, 624, 965, 1715, 2107, 2471, 3001
Cfr10I RCCGGY 6 cut(s) 788, 911, 1465, 1490, 3346, 3678
Cfr13I GGNCC 5 cut(s) 27, 889, 1316, 3197, 3622
ClaI ATCGAT 3 cut(s) 318, 1798, 3711
CseI GACGC 4 cut(s) 54, 454, 1526, 1730
CspAI ACCGGT 2 cut(s) 911, 3678
DriI GACNNNNNGTC 3 cut(s) 1882, 2485, 3607
EaeI YGGCCR 2 cut(s) 610, 1075
Eam1104I CTCTTC 4 cut(s) 798, 2403, 3209, 3314
Eam1105I GACNNNNNGTC 3 cut(s) 1882, 2485, 3607
EarI CTCTTC 4 cut(s) 798, 2403, 3209, 3314
Eco105I TACGTA 1 cut(s) 2702
Eco130I CCWWGG 4 cut(s) 271, 693, 2751, 2851
Eco31I GGTCTC 1 cut(s) 1177
Eco32I GATATC 4 cut(s) 2736, 2908, 3136, 3289
Eco47I GGWCC 1 cut(s) 3622
Eco47III AGCGCT 3 cut(s) 1714, 2470, 3000
Eco57I CTGAAG 5 cut(s) 552, 822, 1042, 2645, 3489
Eco88I CYCGRG 2 cut(s) 2108, 2180
EcoO109I RGGNCCY 1 cut(s) 889
EcoRII CCWGG 1 cut(s) 2215
EcoRV GATATC 4 cut(s) 2736, 2908, 3136, 3289
EcoT14I CCWWGG 4 cut(s) 271, 693, 2751, 2851
EcoT22I ATGCAT 1 cut(s) 2869
ErhI CCWWGG 4 cut(s) 271, 693, 2751, 2851
FalI AAGNNNNNCTT 8 cut(s) 96, 128, 2154, 2186, 2361, 2393, 3618, 3650
FaqI GGGAC 2 cut(s) 2273, 2654
FauI CCCGC 1 cut(s) 150
FblI GTMKAC 1 cut(s) 749
FokI GGATG 3 cut(s) 1356, 1409, 2360
FspBI CTAG 8 cut(s) 54, 581, 1320, 1736, 1754, 2474, 2963, 3332
GlaI GCGC 7 cut(s) 185, 623, 964, 1714, 2106, 2470, 3000
GsaI CCCAGC 1 cut(s) 902
GsuI CTGGAG 1 cut(s) 2726
HaeII RGCGCY 3 cut(s) 1716, 2472, 3002
HgaI GACGC 4 cut(s) 54, 454, 1526, 1730
HhaI GCGC 7 cut(s) 186, 624, 965, 1715, 2107, 2471, 3001
Hin6I GCGC 7 cut(s) 184, 622, 963, 1713, 2105, 2469, 2999
HinP1I GCGC 7 cut(s) 184, 622, 963, 1713, 2105, 2469, 2999
HincII GTYRAC 2 cut(s) 2490, 3687
HindII GTYRAC 2 cut(s) 2490, 3687
HindIII AAGCTT 1 cut(s) 3295
HphI GGTGA 6 cut(s) 611, 779, 1228, 1924, 2530, 3130
Hpy166II GTNNAC 9 cut(s) 78, 229, 750, 832, 942, 1806, 1822, 2490, 3687
Hpy8I GTNNAC 9 cut(s) 78, 229, 750, 832, 942, 1806, 1822, 2490, 3687
HpyAV CCTTC 5 cut(s) 1571, 2548, 2620, 2980, 3464
HpyCH4IV ACGT 3 cut(s) 2456, 2543, 2701
HpySE526I ACGT 3 cut(s) 2456, 2543, 2701
HspAI GCGC 7 cut(s) 184, 622, 963, 1713, 2105, 2469, 2999
Kpn2I TCCGGA 3 cut(s) 148, 1631, 3512
KpnI GGTACC 1 cut(s) 3121
KroI GCCGGC 3 cut(s) 788, 1490, 3346
KroNI GCCGGC 3 cut(s) 790, 1492, 3348
LmnI GCTCC 8 cut(s) 728, 1090, 1289, 2074, 2170, 2332, 2597, 3343
LweI GCATC 7 cut(s) 425, 562, 580, 1015, 2876, 3410, 3688
MaeI CTAG 8 cut(s) 54, 581, 1320, 1736, 1754, 2474, 2963, 3332
MaeII ACGT 3 cut(s) 2456, 2543, 2701
MaeIII GTNAC 6 cut(s) 599, 1767, 2281, 2518, 2935, 3418
MbiI CCGCTC 1 cut(s) 2335
MfeI CAATTG 2 cut(s) 1101, 3537
MflI RGATCY 2 cut(s) 854, 3559
MhlI GDGCHC 1 cut(s) 1340
MlsI TGGCCA 2 cut(s) 612, 1077
MluNI TGGCCA 2 cut(s) 612, 1077
MlyI GAGTC 3 cut(s) 396, 2885, 3617
MmeI TCCRAC 3 cut(s) 144, 1374, 1444
Mox20I TGGCCA 2 cut(s) 612, 1077
Mph1103I ATGCAT 1 cut(s) 2869
MroI TCCGGA 3 cut(s) 148, 1631, 3512
MroNI GCCGGC 3 cut(s) 788, 1490, 3346
MroXI GAANNNNTTC 1 cut(s) 1031
MscI TGGCCA 2 cut(s) 612, 1077
MseI TTAA 4 cut(s) 516, 2360, 2930, 3099
MslI CAYNNNNRTG 6 cut(s) 276, 421, 670, 1139, 2080, 3048
Msp20I TGGCCA 2 cut(s) 612, 1077
MspA1I CMGCKG 3 cut(s) 1062, 2564, 3762
MspR9I CCNGG 3 cut(s) 364, 454, 2217
MunI CAATTG 2 cut(s) 1101, 3537
Mva1269I GAATGC 4 cut(s) 437, 1031, 2834, 3445
MvaI CCWGG 1 cut(s) 2217
MvnI CGCG 3 cut(s) 448, 2349, 2682
NaeI GCCGGC 3 cut(s) 790, 1492, 3348
NciI CCSGG 2 cut(s) 364, 454
NcoI CCATGG 1 cut(s) 271
NgoMIV GCCGGC 3 cut(s) 788, 1490, 3346
NlaIV GGNNCC 4 cut(s) 705, 1993, 3119, 3345
NmeAIII GCCGAG 1 cut(s) 55
NmuCI GTSAC 6 cut(s) 599, 1767, 2281, 2518, 2935, 3418
NsiI ATGCAT 1 cut(s) 2869
NspI RCATGY 2 cut(s) 1921, 2240
NspV TTCGAA 1 cut(s) 2381
PaeI GCATGC 1 cut(s) 1921
PagI TCATGA 2 cut(s) 1009, 2910
PaqCI CACCTGC 1 cut(s) 713
PciI ACATGT 1 cut(s) 2236
PctI GAATGC 4 cut(s) 437, 1031, 2834, 3445
PdiI GCCGGC 3 cut(s) 790, 1492, 3348
PdmI GAANNNNTTC 1 cut(s) 1031
PflMI CCANNNNNTGG 1 cut(s) 1819
PinAI ACCGGT 2 cut(s) 911, 3678
Ple19I CGATCG 1 cut(s) 657
PleI GAGTC 3 cut(s) 396, 2885, 3616
PpsI GAGTC 3 cut(s) 396, 2885, 3616
Ppu21I YACGTR 1 cut(s) 2702
PscI ACATGT 1 cut(s) 2236
PshBI ATTAAT 2 cut(s) 516, 2360
Psp1406I AACGTT 1 cut(s) 2456
Psp6I CCWGG 1 cut(s) 2215
PspFI CCCAGC 1 cut(s) 898
PspGI CCWGG 1 cut(s) 2215
PspN4I GGNNCC 4 cut(s) 705, 1993, 3119, 3345
PspPI GGNCC 5 cut(s) 27, 889, 1316, 3197, 3622
PstI CTGCAG 1 cut(s) 2307
PstNI CAGNNNCTG 1 cut(s) 3611
PsuI RGATCY 2 cut(s) 854, 3559
PvuI CGATCG 1 cut(s) 657
PvuII CAGCTG 2 cut(s) 2564, 3762
RseI CAYNNNNRTG 6 cut(s) 276, 421, 670, 1139, 2080, 3048
SaqAI TTAA 4 cut(s) 516, 2360, 2930, 3099
Sau96I GGNCC 5 cut(s) 27, 889, 1316, 3197, 3622
ScaI AGTACT 1 cut(s) 2874
SchI GAGTC 3 cut(s) 396, 2885, 3617
ScrFI CCNGG 3 cut(s) 364, 454, 2217
SduI GDGCHC 1 cut(s) 1340
SfaNI GCATC 7 cut(s) 425, 562, 580, 1015, 2876, 3410, 3688
SfcI CTRYAG 4 cut(s) 1779, 2303, 2706, 3189
SfuI TTCGAA 1 cut(s) 2381
SinI GGWCC 1 cut(s) 3622
SmiMI CAYNNNNRTG 6 cut(s) 276, 421, 670, 1139, 2080, 3048
SmlI CTYRAG 2 cut(s) 893, 1273
SmoI CTYRAG 2 cut(s) 893, 1273
SnaBI TACGTA 1 cut(s) 2702
SpeI ACTAGT 2 cut(s) 53, 1735
SphI GCATGC 1 cut(s) 1921
SsiI CCGC 6 cut(s) 143, 478, 1062, 2009, 2220, 2335
SspMI CTAG 8 cut(s) 54, 581, 1320, 1736, 1754, 2474, 2963, 3332
StyD4I CCNGG 3 cut(s) 362, 452, 2215
StyI CCWWGG 4 cut(s) 271, 693, 2751, 2851
TaiI ACGT 3 cut(s) 2459, 2546, 2704
TaqII GACCGA 1 cut(s) 296
TatI WGTACW 5 cut(s) 15, 384, 831, 2872, 3218
TauI GCSGC 2 cut(s) 2223, 2338
Tru1I TTAA 4 cut(s) 516, 2360, 2930, 3099
Tru9I TTAA 4 cut(s) 516, 2360, 2930, 3099
TseFI GTSAC 6 cut(s) 599, 1767, 2281, 2518, 2935, 3418
Tsp45I GTSAC 6 cut(s) 599, 1767, 2281, 2518, 2935, 3418
TspDTI ATGAA 7 cut(s) 356, 700, 1419, 1561, 2927, 2999, 3442
TspGWI ACGGA 4 cut(s) 150, 1035, 1197, 2746
Van91I CCANNNNNTGG 1 cut(s) 1819
VpaK11BI GGWCC 1 cut(s) 3622
VspI ATTAAT 2 cut(s) 516, 2360
XapI RAATTY 2 cut(s) 2896, 3157
XceI RCATGY 2 cut(s) 1921, 2240
XmiI GTMKAC 1 cut(s) 749
XmnI GAANNNNTTC 1 cut(s) 1031
XspI CTAG 8 cut(s) 54, 581, 1320, 1736, 1754, 2474, 2963, 3332
ZrmI AGTACT 1 cut(s) 2874
Zsp2I ATGCAT 1 cut(s) 2869
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.