Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0001628

Physical Location & Seq

Genomic Coordinates Reverse (-)

14887314 .. 14893414

Gene Structure 6101 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom15g20780.10

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2370 bp

ATGTCGACGACGGAGGTCGACGGCCAAATGGAAGAGAATTCGAATTCGGATTCGAAACCGATGAAGCGTAGAAGCGACAGCAATGGAGATCTCGTGCAGGAGAATGGCGACCCGGACTCGGCCGACACTCACGATCAGCTCGTCCAGACGGTCATGGAGCTCAAATTGCAGAACGAAATCCTGAAGTCTCAGTTCGAAGGATTTCGGAATTCTCAATCGCCGGAGCCGAGCGAGAAGGAAGGCTGCGAATCGGAGGAGGTGAAGCAGCTGCGTCAAACGATTGAATCGTTGAATGTGGAGCTTCTGGAAGAGAAGCAAACGCGAGCTGCGGCGGAAGTGGCTCTGAAGCATCTTCAGGAATCGCACTGGGAAGCAGATTCCAGAGCTCAAGAGCTCTCTGTAAAACTCACTGAAGCTCAACAAAAGTTGGATCGAGAAATAAAAGAGCGGGAAGAGAAGTACTCCGATCTCGACTCGAAATTCACCAGGCTTCACAAACGAGCTAAGCAGCGCATTCAAGATGTTCAAAAGGAAAAAGATGACCTCGAGGAACGATTTCGTGTGGTAAATGAAGCGGCTGAGCGTGCATTGTCTCAGCAGACGGCGTTGCAGCAAGAGCTGGACAGGACCAGGCAACAAGCGAATGACGCATTGAAAGCAATTGATGCAGAGAGGCAACAGCTAAGAAGCGCAAACAACAAACTACGAGACAACCTTGAGGAATTGCGGAACCAGTTGCAACCAAAGGAGATTGCTCTTGAGACATTGCAACAAACAGTTTCAGATAAGGAGCAGATGTTGGAAGACATGCGAGGGATGCTGCAGGCTGCTGAAGAAAAAAGGCAAGCTTCATTAGCTGAACTCTCTGCTAAACATCAAAAGAATTTGGAGCGTTACGAAGCCCAGCTTGCTGAAGTTTCATCTGATAGAAATAAAGCAACTGAAACTATTTCTTCACTTCAGATGCTAGTTGCAGAGAAAGAATCTAAGATTGCAGAAATGGAAGCAGCGTCGACGGGTGAAGCAGCAAGGCTTAGAGCCACGTTGGAAACTGTTAGAGGAGAGCTTGCTTACCTGAAACAAGAACATGAGAAAGAAAAGGAGAGCTGGGAAGCTGCCACCCAAGCACTGAAAACAAAGCTAGAAATTTCTGAGAGCAACCGAATATGTGCTGATATTGAAGTAGCCAAAATGAGAAGCCAGCTGGAATCAGAGGTGTCTGCACAAACACGAAAGCTTGATGTGAGGGATGCTGAACTTGCAGCCCTCAAGGAAGAGATCAACCGCCTTGAAACTGAGTTTTCTTCTTACAAAAGCCGTGCTCATGTGCTTCTTCAAAAGAAGGATGCAGAGCTGGCTGGAGCTAAAGACTCGGAACAAGTCAGAGCTCTTGAGGAAGCACTGAAAGAAGCTGAAAAGGAAGTATTGTTTGTGAGTGCTGAAAGGAATAAGGCCCTTCAAGATCTTAAGGAAGCTTTGAAGAATCATGATAAAGAAATAGCAGAAAGGGATGCTGCTCTTTACAATGCCATGCAGCAGATCAAGAGCTTAGAAACAAAGCTTGAATCTGCTAATGCCCATTACCGGTCAGCGAAAGAAGCATGGGAAGCGAACCTTAATAGTTTGGAAGAAACATGGCGGGTAAGATGTGACACACTGAGAGCTCAAAATGAATCGTCTTCTGGAGAAGATATCAAAAAAGAATTGGAAGACCTCAAATTACGGTATAAAAAGCTGAAGGAGGAGCACAGTTCATTTCGTGATCTTGCTGATAGAATGATCGAGGAAAAGGACAGTGAAATTTCTAGACTTGTAGATGATAATAAAAATCTTCATCAATCGTTGGAGTCAAGATCACGAGCTGATCGCCATGATAACTATAACACTGGCATGCATAAACAGGATGCCGCAAGTATAAGCACTGCTGCTGCAGAACAACAGATTCTGATTTTGGCAAGGCAGCAAGCGCAAAGAGAGGAAGAGCTAGCACAGTCACAACGGCACATTTTAGCGCTTCAAGAGGAAATTGAGGAGCTGGAGCGTGAGAATCGTCTGCACAGCCAACAGGAATCCATGTTGAAGGATGAGTTGCGGAACATGGAAAGATCGCAGAAGAGGGAAGGAGTAGATATGACCTACCTGAAAAATGTGATCTTAAAGCTTCTTGAAACAGGTGAAGTGGAGGCTCTATTACCTGTAGTTGCTATGCTTCTTCAATTTAGTCCGGACGAGGTAAAATCTTATCTCCTACTTGATGCCTTGCAGAAGTGTCAACAAGCCTACCGCCAATCGGCAGATGTTCCTCCTAGCCCGGCTAGTGATACTTCAGGATCCGGTGTCTCTCTTTTCTCAAGATTCTCATTTTCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000228 GO:0000280 GO:0000793 GO:0000794 GO:0000795 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0005794 GO:0005802 GO:0006139 GO:0006259 GO:0006310 GO:0006725 GO:0006807 GO:0006810 GO:0006996 GO:0007049 GO:0007127 GO:0007131 GO:0008150 GO:0008152 GO:0009987 GO:0012505 GO:0016043 GO:0016192 GO:0022402 GO:0022414 GO:0031974 GO:0031981 GO:0031984 GO:0034641 GO:0035825 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044431 GO:0044444 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0048193 GO:0048285 GO:0051179 GO:0051234 GO:0051321 GO:0061982 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0098791 GO:0099086 GO:0140013 GO:1901360 GO:1903046

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRIP

Protein Analysis

790

Amino Acids

90.35

Weight (kDa)

5.06

Isoelectric Point (pI)

58.24

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001628)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G66030 AT5G66030 AT5G66030 AT5G66030
fragaria_vesca	FvH4_1g10521 FvH4_1g10521 FvH4_1g10521 FvH4_1g10521 FvH4_1g10521 FvH4_1g10521
malus_domestica	MD02G1119300.v1.1 MD15G1233300.v1.1
prunus_persica	Prupe.7G179600_v2.0.a1 Prupe.7G179600_v2.0.a1
pyrus_communis	pycom02g09300 pycom05g12530 pycom15g20780
rosa_chinensis	RchiOBHm_Chr2g0097451 RchiOBHm_Chr2g0097461 RchiOBHm_Chr2g0097561 RchiOBHm_Chr2g0097581 RchiOBHm_Chr6g0253501
rosa_laevigata	RLG00000007707 RLG00000016726
rosa_multiflora	Rmu_sc0003151.1_g000017 Rmu_sc0005929.1_g000013 Rmu_sc0009080.1_g000004 Rmu_sc0023738.1_g000001 Rmu_sc0023972.1_g000001
rosa_roxburghii	Rroxscaffold_2G00144680 Rroxscaffold_4G00289770
rosa_rugosa	Rorug02G0067100 Rorug02G0067200 Rorug02G0067300 Rorug02G0067400 Rorug05G0050700
rosa_samantha	Rh2AG113500 Rh2BG116600 Rh2CG118600 Rh2DG117600 Rh3AG216100 Rh3BG375000 Rh3CG269100 Rh3DG243100 Rh4BG210200 Rh4BG210300
rosa_wichuraiana	Rw2G008900 Rw2G019040 Rw3G021420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	545
AccBSI	CCGCTC	1 cut(s)	448
AccI	GTMKAC	3 cut(s)	5, 18, 1013
AccII	CGCG	1 cut(s)	322
AccIII	TCCGGA	1 cut(s)	2224
AclWI	GGATC	3 cut(s)	438, 2325, 2338
AcoI	YGGCCR	2 cut(s)	22, 120
AcsI	RAATTY	7 cut(s)	37, 43, 208, 479, 883, 1146, 1800
AcuI	CTGAAG	9 cut(s)	203, 338, 365, 432, 852, 933, 944, 1757, 2310
AfaI	GTAC	1 cut(s)	461
AfeI	AGCGCT	1 cut(s)	2013
AfiI	CCNNNNNNNGG	3 cut(s)	118, 1584, 2290
AflII	CTTAAG	1 cut(s)	1466
AgeI	ACCGGT	1 cut(s)	1584
AjnI	CCWGG	2 cut(s)	485, 629
Alw21I	GWGCWC	7 cut(s)	162, 388, 396, 1324, 1390, 1666, 1749
Alw26I	GTCTC	5 cut(s)	192, 597, 702, 755, 2344
AlwI	GGATC	3 cut(s)	438, 2325, 2338
AlwNI	CAGNNNCTG	1 cut(s)	1945
Ama87I	CYCGRG	1 cut(s)	545
Aor13HI	TCCGGA	1 cut(s)	2224
Aor51HI	AGCGCT	1 cut(s)	2013
AoxI	GGCC	3 cut(s)	22, 120, 1452
ApoI	RAATTY	7 cut(s)	37, 43, 208, 479, 883, 1146, 1800
AsiGI	ACCGGT	1 cut(s)	1584
Asp700I	GAANNNNTTC	2 cut(s)	201, 555
AspLEI	GCGC	4 cut(s)	513, 692, 1969, 2014
AspS9I	GGNCC	2 cut(s)	627, 1453
AsuC2I	CCSGG	2 cut(s)	113, 2312
AsuHPI	GGTGA	4 cut(s)	271, 475, 1031, 2186
AsuII	TTCGAA	3 cut(s)	41, 53, 195
AsuNHI	GCTAGC	1 cut(s)	1984
AvaI	CYCGRG	1 cut(s)	545
AvaII	GGWCC	1 cut(s)	627
BamHI	GGATCC	1 cut(s)	2330
BanII	GRGCYC	5 cut(s)	162, 388, 396, 1390, 1666
BauI	CACGAG	2 cut(s)	92, 1857
BbsI	GAAGAC	3 cut(s)	810, 1671, 1716
Bbv12I	GWGCWC	7 cut(s)	162, 388, 396, 1324, 1390, 1666, 1749
BceAI	ACGGC	4 cut(s)	37, 618, 1302, 2015
BciT130I	CCWGG	2 cut(s)	487, 631
BcnI	CCSGG	2 cut(s)	113, 2312
BcoDI	GTCTC	5 cut(s)	192, 597, 702, 755, 2344
BfaI	CTAG	6 cut(s)	968, 1142, 1806, 1985, 2307, 2316
BfmI	CTRYAG	3 cut(s)	821, 1929, 2196
BfoI	RGCGCY	1 cut(s)	2015
BfrI	CTTAAG	1 cut(s)	1466
BglII	AGATCT	2 cut(s)	88, 1462
BlpI	GCTNAGC	2 cut(s)	504, 579
BmcAI	AGTACT	1 cut(s)	461
Bme1390I	CCNGG	4 cut(s)	113, 487, 631, 2312
Bme18I	GGWCC	1 cut(s)	627
BmeT110I	CYCGRG	1 cut(s)	545
BmgT120I	GGNCC	2 cut(s)	627, 1453
BmiI	GGNNCC	3 cut(s)	225, 731, 2332
BmrFI	CCNGG	4 cut(s)	113, 487, 631, 2312
BmrI	ACTGGG	1 cut(s)	376
BmsI	GCATC	9 cut(s)	358, 655, 807, 954, 1240, 1336, 1501, 1894, 2245
BmtI	GCTAGC	1 cut(s)	1988
BmuI	ACTGGG	1 cut(s)	376
BoxI	GACNNNNGTC	1 cut(s)	14
BpiI	GAAGAC	3 cut(s)	810, 1671, 1716
BplI	GAGNNNNNCTC	2 cut(s)	446, 478
BpmI	CTGGAG	3 cut(s)	1380, 1704, 2057
Bpu1102I	GCTNAGC	2 cut(s)	504, 579
Bpu14I	TTCGAA	3 cut(s)	41, 53, 195
BpuEI	CTTGAG	6 cut(s)	372, 737, 779, 1253, 1412, 2335
BpuMI	CCSGG	2 cut(s)	113, 2312
BsaWI	WCCGGW	3 cut(s)	1584, 2224, 2333
BsaXI	ACNNNNNCTCC	4 cut(s)	78, 108, 782, 812
Bsc4I	CCNNNNNNNGG	3 cut(s)	118, 1584, 2290
Bse118I	RCCGGY	1 cut(s)	1584
Bse1I	ACTGG	3 cut(s)	371, 733, 1891
Bse3DI	GCAATG	2 cut(s)	88, 764
BseAI	TCCGGA	1 cut(s)	2224
BseBI	CCWGG	2 cut(s)	487, 631
BseGI	GGATG	6 cut(s)	822, 1255, 1351, 1516, 1909, 2089
BseLI	CCNNNNNNNGG	3 cut(s)	118, 1584, 2290
BseMI	GCAATG	2 cut(s)	88, 764
BseMII	CTCAG	6 cut(s)	203, 570, 608, 1143, 1287, 1649
BseNI	ACTGG	3 cut(s)	371, 733, 1891
BseRI	GAGGAG	4 cut(s)	269, 1074, 1757, 2045
BseX3I	CGGCCG	1 cut(s)	120
BseYI	CCCAGC	2 cut(s)	903, 1107
BsgI	GTGCAG	3 cut(s)	116, 1206, 2039
Bsh1236I	CGCG	1 cut(s)	322
Bsh1285I	CGRYCG	1 cut(s)	123
BshFI	GGCC	3 cut(s)	24, 122, 1454
BshTI	ACCGGT	1 cut(s)	1584
BsiEI	CGRYCG	1 cut(s)	123
BsiHKAI	GWGCWC	7 cut(s)	162, 388, 396, 1324, 1390, 1666, 1749
BsiHKCI	CYCGRG	1 cut(s)	545
BsiSI	CCGG	6 cut(s)	113, 221, 1585, 2225, 2312, 2334
BslI	CCNNNNNNNGG	3 cut(s)	118, 1584, 2290
BsmAI	GTCTC	5 cut(s)	192, 597, 702, 755, 2344
BsmI	GAATGC	1 cut(s)	513
BsnI	GGCC	3 cut(s)	24, 122, 1454
BsoBI	CYCGRG	1 cut(s)	545
Bsp119I	TTCGAA	3 cut(s)	41, 53, 195
Bsp1286I	GDGCHC	7 cut(s)	162, 388, 396, 1324, 1390, 1666, 1749
Bsp13I	TCCGGA	1 cut(s)	2224
Bsp1720I	GCTNAGC	2 cut(s)	504, 579
BspANI	GGCC	3 cut(s)	24, 122, 1454
BspCNI	CTCAG	6 cut(s)	202, 571, 607, 1144, 1288, 1650
BspEI	TCCGGA	1 cut(s)	2224
BspFNI	CGCG	1 cut(s)	322
BspHI	TCATGA	1 cut(s)	1486
BspLI	GGNNCC	3 cut(s)	225, 731, 2332
BspMAI	CTGCAG	2 cut(s)	825, 1933
BspOI	GCTAGC	1 cut(s)	1988
BspPI	GGATC	3 cut(s)	438, 2325, 2338
BspQI	GCTCTTC	1 cut(s)	1974
BspT104I	TTCGAA	3 cut(s)	41, 53, 195
BspTI	CTTAAG	1 cut(s)	1466
BsrBI	CCGCTC	1 cut(s)	448
BsrDI	GCAATG	2 cut(s)	88, 764
BsrFI	RCCGGY	1 cut(s)	1584
BsrI	ACTGG	3 cut(s)	371, 733, 1891
BssAI	RCCGGY	1 cut(s)	1584
BssSI	CACGAG	2 cut(s)	92, 1857
Bst2BI	CACGAG	2 cut(s)	92, 1857
Bst2UI	CCWGG	2 cut(s)	487, 631
Bst4CI	ACNGT	7 cut(s)	151, 778, 1054, 1725, 1751, 1796, 1992
Bst6I	CTCTTC	6 cut(s)	27, 303, 447, 1269, 1974, 2108
BstAFI	CTTAAG	1 cut(s)	1466
BstAPI	GCANNNNNTGC	1 cut(s)	665
BstBI	TTCGAA	3 cut(s)	41, 53, 195
BstF5I	GGATG	6 cut(s)	822, 1255, 1351, 1516, 1909, 2089
BstFNI	CGCG	1 cut(s)	322
BstH2I	RGCGCY	1 cut(s)	2015
BstHHI	GCGC	4 cut(s)	513, 692, 1969, 2014
BstMAI	GTCTC	5 cut(s)	192, 597, 702, 755, 2344
BstMCI	CGRYCG	1 cut(s)	123
BstNI	CCWGG	2 cut(s)	487, 631
BstNSI	RCATGY	2 cut(s)	811, 1894
BstPAI	GACNNNNGTC	1 cut(s)	14
BstSCI	CCNGG	4 cut(s)	111, 485, 629, 2310
BstSFI	CTRYAG	3 cut(s)	821, 1929, 2196
BstUI	CGCG	1 cut(s)	322
BstV2I	GAAGAC	3 cut(s)	810, 1671, 1716
BstX2I	RGATCY	3 cut(s)	88, 1462, 2330
BstYI	RGATCY	3 cut(s)	88, 1462, 2330
BstZI	CGGCCG	1 cut(s)	120
BsuRI	GGCC	3 cut(s)	24, 122, 1454
BtsCI	GGATG	6 cut(s)	822, 1255, 1351, 1516, 1909, 2089
BtsI	GCAGTG	1 cut(s)	1920
BtsIMutI	CAGTG	8 cut(s)	364, 408, 1127, 1400, 1655, 1801, 1884, 1920
CaiI	CAGNNNCTG	1 cut(s)	1945
CciI	TCATGA	1 cut(s)	1486
CfoI	GCGC	4 cut(s)	513, 692, 1969, 2014
Cfr10I	RCCGGY	1 cut(s)	1584
Cfr13I	GGNCC	2 cut(s)	627, 1453
CseI	GACGC	3 cut(s)	260, 656, 999
Csp6I	GTAC	1 cut(s)	460
CspAI	ACCGGT	1 cut(s)	1584
CviQI	GTAC	1 cut(s)	460
EaeI	YGGCCR	2 cut(s)	22, 120
EagI	CGGCCG	1 cut(s)	120
Eam1104I	CTCTTC	6 cut(s)	27, 303, 447, 1269, 1974, 2108
EarI	CTCTTC	6 cut(s)	27, 303, 447, 1269, 1974, 2108
EciI	GGCGGA	1 cut(s)	347
Ecl136II	GAGCTC	5 cut(s)	160, 386, 394, 1388, 1664
EclXI	CGGCCG	1 cut(s)	120
Eco24I	GRGCYC	5 cut(s)	162, 388, 396, 1390, 1666
Eco32I	GATATC	1 cut(s)	1693
Eco47I	GGWCC	1 cut(s)	627
Eco47III	AGCGCT	1 cut(s)	2013
Eco52I	CGGCCG	1 cut(s)	120
Eco53kI	GAGCTC	5 cut(s)	160, 386, 394, 1388, 1664
Eco57I	CTGAAG	9 cut(s)	203, 338, 365, 432, 852, 933, 944, 1757, 2310
Eco88I	CYCGRG	1 cut(s)	545
EcoICRI	GAGCTC	5 cut(s)	160, 386, 394, 1388, 1664
EcoO109I	RGGNCCY	1 cut(s)	1453
EcoRI	GAATTC	3 cut(s)	37, 43, 208
EcoRII	CCWGG	2 cut(s)	485, 629
EcoRV	GATATC	1 cut(s)	1693
EcoT22I	ATGCAT	1 cut(s)	1896
EcoT38I	GRGCYC	5 cut(s)	162, 388, 396, 1390, 1666
FalI	AAGNNNNNCTT	6 cut(s)	832, 864, 891, 923, 1599, 1631
FauI	CCCGC	2 cut(s)	441, 1632
FblI	GTMKAC	3 cut(s)	5, 18, 1013
FokI	GGATG	6 cut(s)	829, 1262, 1358, 1523, 1916, 2096
FriOI	GRGCYC	5 cut(s)	162, 388, 396, 1390, 1666
FspBI	CTAG	6 cut(s)	968, 1142, 1806, 1985, 2307, 2316
GlaI	GCGC	4 cut(s)	512, 691, 1968, 2013
GsaI	CCCAGC	2 cut(s)	907, 1111
GsuI	CTGGAG	3 cut(s)	1380, 1704, 2057
HaeII	RGCGCY	1 cut(s)	2015
HaeIII	GGCC	3 cut(s)	24, 122, 1454
HapII	CCGG	6 cut(s)	113, 221, 1585, 2225, 2312, 2334
HgaI	GACGC	3 cut(s)	260, 656, 999
HhaI	GCGC	4 cut(s)	513, 692, 1969, 2014
Hin6I	GCGC	4 cut(s)	511, 690, 1967, 2012
HinP1I	GCGC	4 cut(s)	511, 690, 1967, 2012
HincII	GTYRAC	4 cut(s)	6, 19, 1014, 2273
HindII	GTYRAC	4 cut(s)	6, 19, 1014, 2273
HindIII	AAGCTT	5 cut(s)	846, 1235, 1473, 1559, 2159
HpaII	CCGG	6 cut(s)	113, 221, 1585, 2225, 2312, 2334
HphI	GGTGA	4 cut(s)	271, 475, 1031, 2186
Hpy166II	GTNNAC	4 cut(s)	6, 19, 1014, 2273
Hpy8I	GTNNAC	4 cut(s)	6, 19, 1014, 2273
Hpy99I	CGWCG	5 cut(s)	10, 13, 23, 1015, 1018
HpyAV	CCTTC	8 cut(s)	191, 229, 233, 1336, 1466, 1732, 2074, 2114
HpyCH4III	ACNGT	7 cut(s)	151, 778, 1054, 1725, 1751, 1796, 1992
HpyCH4IV	ACGT	1 cut(s)	1043
HpySE526I	ACGT	1 cut(s)	1043
HspAI	GCGC	4 cut(s)	511, 690, 1967, 2012
Kpn2I	TCCGGA	1 cut(s)	2224
LguI	GCTCTTC	1 cut(s)	1974
LmnI	GCTCC	9 cut(s)	157, 223, 298, 790, 889, 1361, 1744, 2032, 2038
LweI	GCATC	9 cut(s)	358, 655, 807, 954, 1240, 1336, 1501, 1894, 2245
MaeI	CTAG	6 cut(s)	968, 1142, 1806, 1985, 2307, 2316
MaeII	ACGT	1 cut(s)	1043
MaeIII	GTNAC	3 cut(s)	893, 1649, 1992
MbiI	CCGCTC	1 cut(s)	448
MfeI	CAATTG	1 cut(s)	660
MflI	RGATCY	3 cut(s)	88, 1462, 2330
MhlI	GDGCHC	7 cut(s)	162, 388, 396, 1324, 1390, 1666, 1749
MlyI	GAGTC	4 cut(s)	110, 467, 1364, 1856
MmeI	TCCRAC	4 cut(s)	408, 780, 1026, 1824
Mph1103I	ATGCAT	1 cut(s)	1896
MroI	TCCGGA	1 cut(s)	2224
MroXI	GAANNNNTTC	2 cut(s)	201, 555
MseI	TTAA	3 cut(s)	1467, 1617, 2156
MslI	CAYNNNNRTG	1 cut(s)	1889
MspA1I	CMGCKG	2 cut(s)	268, 1204
MspCI	CTTAAG	1 cut(s)	1466
MspI	CCGG	6 cut(s)	113, 221, 1585, 2225, 2312, 2334
MspR9I	CCNGG	4 cut(s)	113, 487, 631, 2312
MunI	CAATTG	1 cut(s)	660
Mva1269I	GAATGC	1 cut(s)	513
MvaI	CCWGG	2 cut(s)	487, 631
MvnI	CGCG	1 cut(s)	322
NciI	CCSGG	2 cut(s)	113, 2312
NheI	GCTAGC	1 cut(s)	1984
NlaIV	GGNNCC	3 cut(s)	225, 731, 2332
NmeAIII	GCCGAG	2 cut(s)	98, 252
NmuCI	GTSAC	2 cut(s)	1649, 1992
NsiI	ATGCAT	1 cut(s)	1896
NspI	RCATGY	2 cut(s)	811, 1894
NspV	TTCGAA	3 cut(s)	41, 53, 195
PaeI	GCATGC	1 cut(s)	1894
PaeR7I	CTCGAG	1 cut(s)	545
PagI	TCATGA	1 cut(s)	1486
PciSI	GCTCTTC	1 cut(s)	1974
PcsI	WCGNNNNNNNCGW	3 cut(s)	138, 224, 284
PctI	GAATGC	1 cut(s)	513
PdmI	GAANNNNTTC	2 cut(s)	201, 555
PinAI	ACCGGT	1 cut(s)	1584
PleI	GAGTC	4 cut(s)	110, 467, 1364, 1855
PpsI	GAGTC	4 cut(s)	110, 467, 1364, 1855
PshAI	GACNNNNGTC	1 cut(s)	14
Psp124BI	GAGCTC	5 cut(s)	162, 388, 396, 1390, 1666
Psp6I	CCWGG	2 cut(s)	485, 629
PspFI	CCCAGC	2 cut(s)	903, 1107
PspGI	CCWGG	2 cut(s)	485, 629
PspN4I	GGNNCC	3 cut(s)	225, 731, 2332
PspPI	GGNCC	2 cut(s)	627, 1453
PspXI	VCTCGAGB	1 cut(s)	545
PstI	CTGCAG	2 cut(s)	825, 1933
PstNI	CAGNNNCTG	1 cut(s)	1945
PsuI	RGATCY	3 cut(s)	88, 1462, 2330
PvuII	CAGCTG	2 cut(s)	268, 1204
RsaI	GTAC	1 cut(s)	461
RsaNI	GTAC	1 cut(s)	460
RseI	CAYNNNNRTG	1 cut(s)	1889
SacI	GAGCTC	5 cut(s)	162, 388, 396, 1390, 1666
SalI	GTCGAC	3 cut(s)	4, 17, 1012
SapI	GCTCTTC	1 cut(s)	1974
SaqAI	TTAA	3 cut(s)	1467, 1617, 2156
Sau96I	GGNCC	2 cut(s)	627, 1453
ScaI	AGTACT	1 cut(s)	461
SchI	GAGTC	4 cut(s)	110, 467, 1364, 1856
ScrFI	CCNGG	4 cut(s)	113, 487, 631, 2312
SduI	GDGCHC	7 cut(s)	162, 388, 396, 1324, 1390, 1666, 1749
SfaNI	GCATC	9 cut(s)	358, 655, 807, 954, 1240, 1336, 1501, 1894, 2245
SfcI	CTRYAG	3 cut(s)	821, 1929, 2196
Sfr274I	CTCGAG	1 cut(s)	545
SfuI	TTCGAA	3 cut(s)	41, 53, 195
SgrDI	CGTCGACG	1 cut(s)	1012
SinI	GGWCC	1 cut(s)	627
SlaI	CTCGAG	1 cut(s)	545
SmiMI	CAYNNNNRTG	1 cut(s)	1889
SmlI	CTYRAG	8 cut(s)	387, 545, 716, 758, 1268, 1391, 1466, 2350
SmoI	CTYRAG	8 cut(s)	387, 545, 716, 758, 1268, 1391, 1466, 2350
SphI	GCATGC	1 cut(s)	1894
SspMI	CTAG	6 cut(s)	968, 1142, 1806, 1985, 2307, 2316
SstI	GAGCTC	5 cut(s)	162, 388, 396, 1390, 1666
StyD4I	CCNGG	4 cut(s)	111, 485, 629, 2310
TaaI	ACNGT	7 cut(s)	151, 778, 1054, 1725, 1751, 1796, 1992
TaiI	ACGT	1 cut(s)	1046
TatI	WGTACW	1 cut(s)	459
TauI	GCSGC	3 cut(s)	332, 578, 1910
Tru1I	TTAA	3 cut(s)	1467, 1617, 2156
Tru9I	TTAA	3 cut(s)	1467, 1617, 2156
TscAI	CASTG	8 cut(s)	371, 415, 1134, 1407, 1662, 1801, 1891, 1927
TseFI	GTSAC	2 cut(s)	1649, 1992
Tsp45I	GTSAC	2 cut(s)	1649, 1992
TspDTI	ATGAA	8 cut(s)	77, 585, 840, 909, 1686, 1743, 1823, 2355
TspGWI	ACGGA	1 cut(s)	26
TspRI	CASTG	8 cut(s)	371, 415, 1134, 1407, 1662, 1801, 1891, 1927
Vha464I	CTTAAG	1 cut(s)	1466
VpaK11BI	GGWCC	1 cut(s)	627
XapI	RAATTY	7 cut(s)	37, 43, 208, 479, 883, 1146, 1800
XbaI	TCTAGA	1 cut(s)	1805
XceI	RCATGY	2 cut(s)	811, 1894
XhoI	CTCGAG	1 cut(s)	545
XmiI	GTMKAC	3 cut(s)	5, 18, 1013
XmnI	GAANNNNTTC	2 cut(s)	201, 555
XspI	CTAG	6 cut(s)	968, 1142, 1806, 1985, 2307, 2316
ZrmI	AGTACT	1 cut(s)	461
Zsp2I	ATGCAT	1 cut(s)	1896

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.