Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0001628

Physical Location & Seq

Genomic Coordinates Reverse (-)

10141052 .. 10147737

Gene Structure 6686 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG113500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2313 bp

ATGGCCGAGGCGGCTCAAATGGAGGACAATTCGAAACCGCAGAGGCACGGAAGCGACAGCAATGGAGATCTCGCATTGGAGAATGGCAGCTCAGGCGATGCTCATGATCAGCTTGTGCAGATGGTCACGGAGCTCAAATTCCAGAACGAATTCCTCAAGTCTCAGATTGAAGGCTTTCAGAGTTTGCAACCAGCAGAACCGAGTGAAGCCGGTGGTTCCGAAGAGGTTGAACGGCTCCGGCAGAGCATTGAGTCATTGAATTCGCAGCTTGAGGAAGAGAAGCAAACACGAGCTGCGGCAGAAAAGGCTCTGAAGCACCTTAGAGAAGAACACTTGGAAGCTGATTCAAGAGCGCAGGACCTCTCTGCAAAGCTAGCTGAAGCTCAACAGAAGTTGGATCAAGAAATTAAAGAGCGTGAAGAGAAGTACTCTGATCTTGACTCGAAATTCACCAGGCTTCACAAACGAGCAAAGCAGCGTATTCAAGATGTTCAAAAGGAAAAAGATGACATTGAGGCTCGATTTCGTGAAGTAAATGAAAGAGCTGAGCGAGCATTATCCCAACAGTCAGCATTGCAGCAAGAGCTTGACAAAACCAGGCAACAAGCAAACGATGCACTGAAAGCAATTGATGCTGAGAGACAACAATTAAGAAGTGCAAATAATAAACTACGAGACAACCTGGAGGAATTGCGAAATGCATTGCAACCAAAAGAGAGTGCTATCGAGGCACTGCAACATACAATTTCGGAGAAGGATCAGATGTTAGAAGATATGCGAGGTTTGCTTCAGGCTGCTGAGGAAAAAAGGCAAGCTTCATTAGCTGAACTCTCTGCTAAACATCAGAAGAATTTGGAGAGTTTGGAAGCGCAACTTGCGGATGCATCATCCGATAGAAATAAAGCAACTGAAACTATTTCTTCACTGCAGATGCTAGTTGCTGAGAAAGAGTCAAAGATTGCAGAGATGGAAGCGGCATCAACGGGTGAGGCAGCAAGGCTTAGAGCTGCTGCAGAAACTGTAAAAGGAGAGCTTGCTCACCTTAAACATGAGCATGAGAAAGAAAAGGAGAGCTGGGAAGCTGCCTCTCGGGGACTGAAAACAAAGCTGGAAGTCACTGAGAGCAATCGGATATGTGCTGAAATTGAAGTAGCCAAAATGAGAAGTCAGCTGGAATCAGAGGTGTCTGCACAAACCCGAATGCTTGATGCAAGAGATGCTGAACTTGCAACTGCCAAGGAGGAGATCAACCGCCTTAAAAATGAATTTTCTTCTTACAAAGTACGTGCTCATGCACTTCTCCAAAAGAAGGATGCAGATCTAGCTGCAGCTAAAGACTCTGAACAAGTTACAGCTCTTGAGGAAGCACTAAAAGAAGCTGAAAAAGAAGTTTCGTCTCTGAGTGCTGAAAGAGATAAGGCCCTTCAGGATCTTCAGGATGCCTTGACTAATTATAATAAAGAACTAGCAGAAAGAGATGCAGCTCTTAATGATACCATGCAGCAGATCAAGAGCTTAGAAAAAAAGCTCGAGTCTACTAATGCCCATCACCGATCCGCCAAAGAAGCATGGGAAGTTAACCTTAGTAATTTGGAAGAAACATGGCGGGCAAGATGTGAAACATTAAGAGCTCAAAATGAAGCATCTTCTGGAGAAGACATAAAAAAAGAATTGGAAGAGCTCAAATTACGGTATAAAAAATTGAAGGAAGAACACAGTTCATTTCGTGATCTTGCTGATAGAATGATGGAGGAGAAGGACAAAGAAATTTCTAGACTTGTAGATGATAATAAGAACCTTCATCAATCTTTGGAGTCAAGACCAAAGGTTGATCATAACGATAATTATAGCACAGGCATGTATAAACAGGATCCATCAAGTTTAAGCACCTCTGCGTTAGAACAGCAGATTCTGATTCTGGCAAGGCAACAAGCGCAAAGAGAGGAAGAGCTAGCACAGTCACAGAGGCACATTTTAGCGCTTCAAGAGGAAATTGAGGAGCTGGAGCATGAAAATCGTCTGCATAGCCAACAGGAAACAATGTTGAAGACTGAGCTTCGCAACATGGAAAGATCACAGAAGAGGGAAGGAGTAGATATGACTTACCTCAAAAATGTTATATTAAAGCTTCTTGAAACTGGTGAAGTGGAGGCTCTATTACCTGTGGTTGGTATGCTCCTTCAGTTTAGTCCTGAAGAGATCCAGAAGTGTCAACAAGCATACCGCGCATCTGTAGATGTCCCTCCTAACGCAGCAAGTGATGCTTCAGGATCTGCCACCTCCTCGCTTTTCTCAAGATTCTCATTCTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000228 GO:0000280 GO:0000793 GO:0000794 GO:0000795 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0005794 GO:0005802 GO:0006139 GO:0006259 GO:0006310 GO:0006725 GO:0006807 GO:0006810 GO:0006996 GO:0007049 GO:0007127 GO:0007131 GO:0008150 GO:0008152 GO:0009987 GO:0012505 GO:0016043 GO:0016192 GO:0022402 GO:0022414 GO:0031974 GO:0031981 GO:0031984 GO:0034641 GO:0035825 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044431 GO:0044444 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0048193 GO:0048285 GO:0051179 GO:0051234 GO:0051321 GO:0061982 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0098791 GO:0099086 GO:0140013 GO:1901360 GO:1903046

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRIP

Protein Analysis

770

Amino Acids

87.37

Weight (kDa)

5.11

Isoelectric Point (pI)

54.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRIP	PF01465	697 - 737	1e-12	GRIP domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0001628)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G66030 AT5G66030 AT5G66030 AT5G66030
fragaria_vesca	FvH4_1g10521 FvH4_1g10521 FvH4_1g10521 FvH4_1g10521 FvH4_1g10521 FvH4_1g10521
malus_domestica	MD02G1119300.v1.1 MD15G1233300.v1.1
prunus_persica	Prupe.7G179600_v2.0.a1 Prupe.7G179600_v2.0.a1
pyrus_communis	pycom02g09300 pycom05g12530 pycom15g20780
rosa_chinensis	RchiOBHm_Chr2g0097451 RchiOBHm_Chr2g0097461 RchiOBHm_Chr2g0097561 RchiOBHm_Chr2g0097581 RchiOBHm_Chr6g0253501
rosa_laevigata	RLG00000007707 RLG00000016726
rosa_multiflora	Rmu_sc0003151.1_g000017 Rmu_sc0005929.1_g000013 Rmu_sc0009080.1_g000004 Rmu_sc0023738.1_g000001 Rmu_sc0023972.1_g000001
rosa_roxburghii	Rroxscaffold_2G00144680 Rroxscaffold_4G00289770
rosa_rugosa	Rorug02G0067100 Rorug02G0067200 Rorug02G0067300 Rorug02G0067400 Rorug05G0050700
rosa_samantha	Rh2AG113500 Rh2BG116600 Rh2CG118600 Rh2DG117600 Rh3AG216100 Rh3BG375000 Rh3CG269100 Rh3DG243100 Rh4BG210200 Rh4BG210300
rosa_wichuraiana	Rw2G008900 Rw2G019040 Rw3G021420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1455
AccI	GTMKAC	1 cut(s)	1535
AccII	CGCG	1 cut(s)	2226
AciI	CCGC	9 cut(s)	11, 38, 296, 878, 974, 1252, 1557, 1606, 2224
AclWI	GGATC	8 cut(s)	405, 765, 1437, 1548, 1865, 1878, 2194, 2278
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	7 cut(s)	137, 149, 259, 446, 850, 1265, 1767
AcuI	CTGAAG	8 cut(s)	332, 399, 773, 1409, 1418, 2165, 2214, 2250
AfaI	GTAC	2 cut(s)	428, 1284
AfeI	AGCGCT	1 cut(s)	1980
AfiI	CCNNNNNNNGG	2 cut(s)	1309, 2168
AjnI	CCWGG	3 cut(s)	452, 596, 681
Alw21I	GWGCWC	4 cut(s)	135, 1291, 1633, 1683
Alw26I	GTCTC	4 cut(s)	165, 634, 669, 1401
AlwI	GGATC	8 cut(s)	405, 765, 1437, 1548, 1865, 1878, 2194, 2278
AlwNI	CAGNNNCTG	3 cut(s)	1019, 1912, 2273
Ama87I	CYCGRG	2 cut(s)	1089, 1529
Aor51HI	AGCGCT	1 cut(s)	1980
AoxI	GGCC	2 cut(s)	3, 1419
ApoI	RAATTY	7 cut(s)	137, 149, 259, 446, 850, 1265, 1767
Asp700I	GAANNNNTTC	2 cut(s)	149, 174
AspLEI	GCGC	5 cut(s)	355, 871, 1936, 1981, 2228
AspS9I	GGNCC	2 cut(s)	358, 1420
AsuHPI	GGTGA	5 cut(s)	442, 998, 1031, 1541, 2153
AsuII	TTCGAA	1 cut(s)	32
AsuNHI	GCTAGC	2 cut(s)	373, 1951
AvaI	CYCGRG	2 cut(s)	1089, 1529
AvaII	GGWCC	1 cut(s)	358
BamHI	GGATCC	1 cut(s)	1870
BanII	GRGCYC	3 cut(s)	135, 1633, 1683
BauI	CACGAG	1 cut(s)	288
BbsI	GAAGAC	2 cut(s)	1662, 2054
Bbv12I	GWGCWC	4 cut(s)	135, 1291, 1633, 1683
BbvCI	CCTCAGC	1 cut(s)	798
BccI	CCATC	5 cut(s)	115, 961, 1554, 1741, 1882
BceAI	ACGGC	1 cut(s)	248
BcgI	CGANNNNNNTGC	2 cut(s)	1997, 2031
BciT130I	CCWGG	3 cut(s)	454, 598, 683
BclI	TGATCA	2 cut(s)	106, 1831
BcoDI	GTCTC	4 cut(s)	165, 634, 669, 1401
BfaI	CTAG	6 cut(s)	374, 935, 1322, 1466, 1773, 1952
BfmI	CTRYAG	4 cut(s)	926, 1011, 1326, 2232
BfoI	RGCGCY	1 cut(s)	1982
BglI	GCCNNNNNGGC	1 cut(s)	11
BglII	AGATCT	2 cut(s)	67, 1318
BlpI	GCTNAGC	1 cut(s)	546
BmcAI	AGTACT	1 cut(s)	428
Bme1390I	CCNGG	3 cut(s)	454, 598, 683
Bme18I	GGWCC	1 cut(s)	358
BmeT110I	CYCGRG	2 cut(s)	1089, 1529
BmgT120I	GGNCC	2 cut(s)	358, 1420
BmiI	GGNNCC	3 cut(s)	217, 236, 1872
BmrFI	CCNGG	3 cut(s)	454, 598, 683
BmtI	GCTAGC	2 cut(s)	377, 1955
BpiI	GAAGAC	2 cut(s)	1662, 2054
BplI	GAGNNNNNCTC	2 cut(s)	413, 445
BpmI	CTGGAG	3 cut(s)	704, 1671, 2024
Bpu10I	CCTNAGC	2 cut(s)	91, 798
Bpu1102I	GCTNAGC	1 cut(s)	546
Bpu14I	TTCGAA	1 cut(s)	32
BpuEI	CTTGAG	4 cut(s)	140, 290, 1379, 2278
BsaAI	YACGTR	1 cut(s)	1286
BsaBI	GATNNNNATC	1 cut(s)	1317
BsaJI	CCNNGG	2 cut(s)	6, 1236
Bsc4I	CCNNNNNNNGG	2 cut(s)	1309, 2168
Bse118I	RCCGGY	1 cut(s)	209
Bse1I	ACTGG	1 cut(s)	2143
Bse3DI	GCAATG	3 cut(s)	67, 572, 701
Bse8I	GATNNNNATC	1 cut(s)	1317
BseBI	CCWGG	3 cut(s)	454, 598, 683
BseDI	CCNNGG	2 cut(s)	6, 1236
BseGI	GGATG	4 cut(s)	886, 887, 1318, 1444
BseJI	GATNNNNATC	1 cut(s)	1317
BseLI	CCNNNNNNNGG	2 cut(s)	1309, 2168
BseMI	GCAATG	3 cut(s)	67, 572, 701
BseMII	CTCAG	9 cut(s)	105, 176, 537, 627, 789, 933, 1110, 1391, 2043
BseNI	ACTGG	1 cut(s)	2143
BseRI	GAGGAG	4 cut(s)	1256, 1766, 2012, 2272
BseYI	CCCAGC	1 cut(s)	1074
BsgI	GTGCAG	2 cut(s)	137, 1173
Bsh1236I	CGCG	1 cut(s)	2226
BshFI	GGCC	2 cut(s)	5, 1421
BsiHKAI	GWGCWC	4 cut(s)	135, 1291, 1633, 1683
BsiHKCI	CYCGRG	2 cut(s)	1089, 1529
BsiSI	CCGG	2 cut(s)	210, 238
BslFI	GGGAC	2 cut(s)	1107, 2225
BslI	CCNNNNNNNGG	2 cut(s)	1309, 2168
BsmAI	GTCTC	4 cut(s)	165, 634, 669, 1401
BsmBI	CGTCTC	1 cut(s)	1401
BsmFI	GGGAC	2 cut(s)	1107, 2225
BsmI	GAATGC	1 cut(s)	1206
BsnI	GGCC	2 cut(s)	5, 1421
BsoBI	CYCGRG	2 cut(s)	1089, 1529
Bsp119I	TTCGAA	1 cut(s)	32
Bsp1286I	GDGCHC	4 cut(s)	135, 1291, 1633, 1683
Bsp1720I	GCTNAGC	1 cut(s)	546
BspACI	CCGC	9 cut(s)	11, 38, 296, 878, 974, 1252, 1557, 1606, 2224
BspANI	GGCC	2 cut(s)	5, 1421
BspCNI	CTCAG	9 cut(s)	104, 175, 538, 628, 790, 934, 1111, 1392, 2044
BspFNI	CGCG	1 cut(s)	2226
BspHI	TCATGA	1 cut(s)	103
BspLI	GGNNCC	3 cut(s)	217, 236, 1872
BspMAI	CTGCAG	3 cut(s)	930, 1015, 1330
BspOI	GCTAGC	2 cut(s)	377, 1955
BspPI	GGATC	8 cut(s)	405, 765, 1437, 1548, 1865, 1878, 2194, 2278
BspQI	GCTCTTC	2 cut(s)	1671, 1941
BspT104I	TTCGAA	1 cut(s)	32
BsrDI	GCAATG	3 cut(s)	67, 572, 701
BsrFI	RCCGGY	1 cut(s)	209
BsrI	ACTGG	1 cut(s)	2143
BssAI	RCCGGY	1 cut(s)	209
BssECI	CCNNGG	2 cut(s)	6, 1236
BssSI	CACGAG	1 cut(s)	288
BssT1I	CCWWGG	1 cut(s)	1236
Bst2BI	CACGAG	1 cut(s)	288
Bst2UI	CCWGG	3 cut(s)	454, 598, 683
Bst4CI	ACNGT	5 cut(s)	567, 1021, 1692, 1718, 1959
Bst6I	CTCTTC	7 cut(s)	216, 270, 414, 1671, 1941, 2075, 2190
BstAPI	GCANNNNNTGC	4 cut(s)	614, 632, 1217, 2261
BstBAI	YACGTR	1 cut(s)	1286
BstBI	TTCGAA	1 cut(s)	32
BstC8I	GCNNGC	6 cut(s)	375, 552, 813, 1035, 1608, 1953
BstF5I	GGATG	4 cut(s)	886, 887, 1318, 1444
BstFNI	CGCG	1 cut(s)	2226
BstH2I	RGCGCY	1 cut(s)	1982
BstHHI	GCGC	5 cut(s)	355, 871, 1936, 1981, 2228
BstMAI	GTCTC	4 cut(s)	165, 634, 669, 1401
BstNI	CCWGG	3 cut(s)	454, 598, 683
BstNSI	RCATGY	1 cut(s)	1861
BstSCI	CCNGG	3 cut(s)	452, 596, 681
BstSFI	CTRYAG	4 cut(s)	926, 1011, 1326, 2232
BstUI	CGCG	1 cut(s)	2226
BstV2I	GAAGAC	2 cut(s)	1662, 2054
BstX2I	RGATCY	6 cut(s)	67, 1318, 1429, 1870, 2199, 2270
BstYI	RGATCY	6 cut(s)	67, 1318, 1429, 1870, 2199, 2270
BsuRI	GGCC	2 cut(s)	5, 1421
BtgZI	GCGATG	1 cut(s)	111
BtsCI	GGATG	4 cut(s)	886, 887, 1318, 1444
BtsI	GCAGTG	2 cut(s)	731, 923
BtsIMutI	CAGTG	4 cut(s)	617, 731, 923, 1116
Cac8I	GCNNGC	6 cut(s)	375, 552, 813, 1035, 1608, 1953
CaiI	CAGNNNCTG	3 cut(s)	1019, 1912, 2273
CciI	TCATGA	1 cut(s)	103
CfoI	GCGC	5 cut(s)	355, 871, 1936, 1981, 2228
Cfr10I	RCCGGY	1 cut(s)	209
Cfr13I	GGNCC	2 cut(s)	358, 1420
Csp6I	GTAC	2 cut(s)	427, 1283
CviQI	GTAC	2 cut(s)	427, 1283
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	7 cut(s)	216, 270, 414, 1671, 1941, 2075, 2190
EarI	CTCTTC	7 cut(s)	216, 270, 414, 1671, 1941, 2075, 2190
EciI	GGCGGA	1 cut(s)	1546
Ecl136II	GAGCTC	3 cut(s)	133, 1631, 1681
Eco130I	CCWWGG	1 cut(s)	1236
Eco24I	GRGCYC	3 cut(s)	135, 1633, 1683
Eco47I	GGWCC	1 cut(s)	358
Eco47III	AGCGCT	1 cut(s)	1980
Eco53kI	GAGCTC	3 cut(s)	133, 1631, 1681
Eco57I	CTGAAG	8 cut(s)	332, 399, 773, 1409, 1418, 2165, 2214, 2250
Eco88I	CYCGRG	2 cut(s)	1089, 1529
EcoICRI	GAGCTC	3 cut(s)	133, 1631, 1681
EcoO109I	RGGNCCY	2 cut(s)	358, 1420
EcoRI	GAATTC	2 cut(s)	149, 259
EcoRII	CCWGG	3 cut(s)	452, 596, 681
EcoT14I	CCWWGG	1 cut(s)	1236
EcoT22I	ATGCAT	2 cut(s)	703, 886
EcoT38I	GRGCYC	3 cut(s)	135, 1633, 1683
ErhI	CCWWGG	1 cut(s)	1236
Esp3I	CGTCTC	1 cut(s)	1401
FaqI	GGGAC	2 cut(s)	1107, 2225
FauI	CCCGC	1 cut(s)	1599
FbaI	TGATCA	2 cut(s)	106, 1831
FblI	GTMKAC	1 cut(s)	1535
FokI	GGATG	4 cut(s)	874, 893, 1325, 1451
FriOI	GRGCYC	3 cut(s)	135, 1633, 1683
FspBI	CTAG	6 cut(s)	374, 935, 1322, 1466, 1773, 1952
GlaI	GCGC	5 cut(s)	354, 870, 1935, 1980, 2227
GsaI	CCCAGC	1 cut(s)	1078
GsuI	CTGGAG	3 cut(s)	704, 1671, 2024
HaeII	RGCGCY	1 cut(s)	1982
HaeIII	GGCC	2 cut(s)	5, 1421
HapII	CCGG	2 cut(s)	210, 238
HhaI	GCGC	5 cut(s)	355, 871, 1936, 1981, 2228
Hin6I	GCGC	5 cut(s)	353, 869, 1934, 1979, 2226
HinP1I	GCGC	5 cut(s)	353, 869, 1934, 1979, 2226
HincII	GTYRAC	2 cut(s)	1579, 2213
HindII	GTYRAC	2 cut(s)	1579, 2213
HindIII	AAGCTT	2 cut(s)	813, 2126
HpaI	GTTAAC	1 cut(s)	1579
HpaII	CCGG	2 cut(s)	210, 238
HphI	GGTGA	5 cut(s)	442, 998, 1031, 1541, 2153
Hpy166II	GTNNAC	3 cut(s)	1536, 1579, 2213
Hpy8I	GTNNAC	3 cut(s)	1536, 1579, 2213
HpyAV	CCTTC	9 cut(s)	164, 748, 1303, 1433, 1699, 1750, 1808, 2081, 2189
HpyCH4III	ACNGT	5 cut(s)	567, 1021, 1692, 1718, 1959
HpyCH4IV	ACGT	1 cut(s)	1285
HpySE526I	ACGT	1 cut(s)	1285
HspAI	GCGC	5 cut(s)	353, 869, 1934, 1979, 2226
Ksp22I	TGATCA	2 cut(s)	106, 1831
KspAI	GTTAAC	1 cut(s)	1579
LguI	GCTCTTC	2 cut(s)	1671, 1941
LmnI	GCTCC	5 cut(s)	130, 240, 1999, 2005, 2181
MaeI	CTAG	6 cut(s)	374, 935, 1322, 1466, 1773, 1952
MaeII	ACGT	1 cut(s)	1285
MaeIII	GTNAC	4 cut(s)	124, 1114, 1348, 1959
MfeI	CAATTG	1 cut(s)	627
MflI	RGATCY	6 cut(s)	67, 1318, 1429, 1870, 2199, 2270
MhlI	GDGCHC	4 cut(s)	135, 1291, 1633, 1683
MlyI	GAGTC	6 cut(s)	260, 434, 959, 1331, 1541, 1823
MmeI	TCCRAC	1 cut(s)	375
Mph1103I	ATGCAT	2 cut(s)	703, 886
MroXI	GAANNNNTTC	2 cut(s)	149, 174
MslI	CAYNNNNRTG	2 cut(s)	1053, 1856
MspA1I	CMGCKG	1 cut(s)	1171
MspI	CCGG	2 cut(s)	210, 238
MspR9I	CCNGG	3 cut(s)	454, 598, 683
MunI	CAATTG	1 cut(s)	627
Mva1269I	GAATGC	1 cut(s)	1206
MvaI	CCWGG	3 cut(s)	454, 598, 683
MvnI	CGCG	1 cut(s)	2226
NheI	GCTAGC	2 cut(s)	373, 1951
NlaIV	GGNNCC	3 cut(s)	217, 236, 1872
NmeAIII	GCCGAG	1 cut(s)	31
NmuCI	GTSAC	3 cut(s)	124, 1114, 1959
NsiI	ATGCAT	2 cut(s)	703, 886
NspI	RCATGY	1 cut(s)	1861
NspV	TTCGAA	1 cut(s)	32
PaeR7I	CTCGAG	1 cut(s)	1529
PagI	TCATGA	1 cut(s)	103
PciSI	GCTCTTC	2 cut(s)	1671, 1941
PctI	GAATGC	1 cut(s)	1206
PdmI	GAANNNNTTC	2 cut(s)	149, 174
PfeI	GAWTC	5 cut(s)	344, 1175, 1909, 1915, 2298
PleI	GAGTC	6 cut(s)	259, 434, 958, 1331, 1540, 1822
PpsI	GAGTC	6 cut(s)	259, 434, 958, 1331, 1540, 1822
Ppu21I	YACGTR	1 cut(s)	1286
PpuMI	RGGWCCY	1 cut(s)	358
PsiI	TTATAA	1 cut(s)	1455
Psp124BI	GAGCTC	3 cut(s)	135, 1633, 1683
Psp5II	RGGWCCY	1 cut(s)	358
Psp6I	CCWGG	3 cut(s)	452, 596, 681
PspFI	CCCAGC	1 cut(s)	1074
PspGI	CCWGG	3 cut(s)	452, 596, 681
PspN4I	GGNNCC	3 cut(s)	217, 236, 1872
PspPI	GGNCC	2 cut(s)	358, 1420
PspPPI	RGGWCCY	1 cut(s)	358
PspXI	VCTCGAGB	1 cut(s)	1529
PstI	CTGCAG	3 cut(s)	930, 1015, 1330
PstNI	CAGNNNCTG	3 cut(s)	1019, 1912, 2273
PsuI	RGATCY	6 cut(s)	67, 1318, 1429, 1870, 2199, 2270
PvuII	CAGCTG	1 cut(s)	1171
RsaI	GTAC	2 cut(s)	428, 1284
RsaNI	GTAC	2 cut(s)	427, 1283
RseI	CAYNNNNRTG	2 cut(s)	1053, 1856
SacI	GAGCTC	3 cut(s)	135, 1633, 1683
SapI	GCTCTTC	2 cut(s)	1671, 1941
Sau96I	GGNCC	2 cut(s)	358, 1420
ScaI	AGTACT	1 cut(s)	428
SchI	GAGTC	6 cut(s)	260, 434, 959, 1331, 1541, 1823
ScrFI	CCNGG	3 cut(s)	454, 598, 683
SduI	GDGCHC	4 cut(s)	135, 1291, 1633, 1683
SfcI	CTRYAG	4 cut(s)	926, 1011, 1326, 2232
Sfr274I	CTCGAG	1 cut(s)	1529
SfuI	TTCGAA	1 cut(s)	32
SinI	GGWCC	1 cut(s)	358
SlaI	CTCGAG	1 cut(s)	1529
SmiMI	CAYNNNNRTG	2 cut(s)	1053, 1856
SmlI	CTYRAG	5 cut(s)	155, 269, 1358, 1529, 2293
SmoI	CTYRAG	5 cut(s)	155, 269, 1358, 1529, 2293
SsiI	CCGC	9 cut(s)	11, 38, 296, 878, 974, 1252, 1557, 1606, 2224
SspMI	CTAG	6 cut(s)	374, 935, 1322, 1466, 1773, 1952
SstI	GAGCTC	3 cut(s)	135, 1633, 1683
StyD4I	CCNGG	3 cut(s)	452, 596, 681
StyI	CCWWGG	1 cut(s)	1236
TaaI	ACNGT	5 cut(s)	567, 1021, 1692, 1718, 1959
TaiI	ACGT	1 cut(s)	1288
TaqI	TCGA	5 cut(s)	32, 443, 520, 726, 1530
TatI	WGTACW	1 cut(s)	426
TauI	GCSGC	3 cut(s)	14, 299, 977
TfiI	GAWTC	5 cut(s)	344, 1175, 1909, 1915, 2298
TscAI	CASTG	4 cut(s)	624, 738, 930, 1123
TseFI	GTSAC	3 cut(s)	124, 1114, 1959
Tsp45I	GTSAC	3 cut(s)	124, 1114, 1959
TspDTI	ATGAA	7 cut(s)	552, 807, 1278, 1653, 1710, 1790, 2025
TspGWI	ACGGA	2 cut(s)	63, 143
TspRI	CASTG	4 cut(s)	624, 738, 930, 1123
VpaK11BI	GGWCC	1 cut(s)	358
XapI	RAATTY	7 cut(s)	137, 149, 259, 446, 850, 1265, 1767
XbaI	TCTAGA	1 cut(s)	1772
XceI	RCATGY	1 cut(s)	1861
XhoI	CTCGAG	1 cut(s)	1529
XmiI	GTMKAC	1 cut(s)	1535
XmnI	GAANNNNTTC	2 cut(s)	149, 174
XspI	CTAG	6 cut(s)	374, 935, 1322, 1466, 1773, 1952
ZrmI	AGTACT	1 cut(s)	428
Zsp2I	ATGCAT	2 cut(s)	703, 886

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.