golgin-97, RanBP2alpha,Imh1p and p230/golgin-245
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G66030 AT5G66030 AT5G66030 AT5G66030 |
| fragaria_vesca | FvH4_1g10521 FvH4_1g10521 FvH4_1g10521 FvH4_1g10521 FvH4_1g10521 FvH4_1g10521 |
| malus_domestica | MD02G1119300.v1.1 MD15G1233300.v1.1 |
| prunus_persica | Prupe.7G179600_v2.0.a1 Prupe.7G179600_v2.0.a1 |
| pyrus_communis | pycom02g09300 pycom05g12530 pycom15g20780 |
| rosa_chinensis | RchiOBHm_Chr2g0097451 RchiOBHm_Chr2g0097461 RchiOBHm_Chr2g0097561 RchiOBHm_Chr2g0097581 RchiOBHm_Chr6g0253501 |
| rosa_laevigata | RLG00000007707 RLG00000016726 |
| rosa_multiflora | Rmu_sc0003151.1_g000017 Rmu_sc0005929.1_g000013 Rmu_sc0009080.1_g000004 Rmu_sc0023738.1_g000001 Rmu_sc0023972.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00144680 Rroxscaffold_4G00289770 |
| rosa_rugosa | Rorug02G0067100 Rorug02G0067200 Rorug02G0067300 Rorug02G0067400 Rorug05G0050700 |
| rosa_samantha | Rh2AG113500 Rh2BG116600 Rh2CG118600 Rh2DG117600 Rh3AG216100 Rh3BG375000 Rh3CG269100 Rh3DG243100 Rh4BG210200 Rh4BG210300 |
| rosa_wichuraiana | Rw2G008900 Rw2G019040 Rw3G021420 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1278, 1443 |
| AccI | GTMKAC | 1 cut(s) | 1523 |
| AciI | CCGC | 8 cut(s) | 11, 38, 296, 878, 974, 1252, 1545, 1594 |
| AclWI | GGATC | 4 cut(s) | 405, 765, 1425, 1536 |
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AcsI | RAATTY | 5 cut(s) | 149, 259, 446, 850, 1265 |
| AcuI | CTGAAG | 5 cut(s) | 332, 399, 773, 1397, 1406 |
| AfaI | GTAC | 2 cut(s) | 428, 1284 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1309 |
| AgsI | TTSAA | 7 cut(s) | 170, 230, 259, 348, 485, 494, 1148 |
| AjnI | CCWGG | 3 cut(s) | 452, 596, 681 |
| Alw21I | GWGCWC | 4 cut(s) | 135, 1291, 1621, 1670 |
| Alw26I | GTCTC | 4 cut(s) | 165, 634, 669, 1389 |
| AlwI | GGATC | 4 cut(s) | 405, 765, 1425, 1536 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1019 |
| Ama87I | CYCGRG | 2 cut(s) | 1089, 1517 |
| AoxI | GGCC | 2 cut(s) | 3, 1407 |
| ApoI | RAATTY | 5 cut(s) | 149, 259, 446, 850, 1265 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 149, 174 |
| AspLEI | GCGC | 2 cut(s) | 355, 871 |
| AspS9I | GGNCC | 2 cut(s) | 358, 1408 |
| AsuHPI | GGTGA | 4 cut(s) | 442, 998, 1031, 1529 |
| AsuNHI | GCTAGC | 1 cut(s) | 373 |
| AvaI | CYCGRG | 2 cut(s) | 1089, 1517 |
| AvaII | GGWCC | 1 cut(s) | 358 |
| BanII | GRGCYC | 3 cut(s) | 135, 1621, 1670 |
| BauI | CACGAG | 1 cut(s) | 288 |
| BbsI | GAAGAC | 1 cut(s) | 1650 |
| Bbv12I | GWGCWC | 4 cut(s) | 135, 1291, 1621, 1670 |
| BbvCI | CCTCAGC | 1 cut(s) | 798 |
| BccI | CCATC | 3 cut(s) | 115, 961, 1542 |
| BceAI | ACGGC | 1 cut(s) | 248 |
| BciT130I | CCWGG | 3 cut(s) | 454, 598, 683 |
| BclI | TGATCA | 1 cut(s) | 106 |
| BcoDI | GTCTC | 4 cut(s) | 165, 634, 669, 1389 |
| BfaI | CTAG | 5 cut(s) | 374, 519, 935, 1322, 1454 |
| BfmI | CTRYAG | 3 cut(s) | 926, 1011, 1326 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 11 |
| BglII | AGATCT | 2 cut(s) | 67, 1318 |
| BlpI | GCTNAGC | 1 cut(s) | 546 |
| BmcAI | AGTACT | 1 cut(s) | 428 |
| Bme1390I | CCNGG | 3 cut(s) | 454, 598, 683 |
| Bme18I | GGWCC | 1 cut(s) | 358 |
| BmeT110I | CYCGRG | 2 cut(s) | 1089, 1517 |
| BmgT120I | GGNCC | 2 cut(s) | 358, 1408 |
| BmiI | GGNNCC | 2 cut(s) | 217, 236 |
| BmrFI | CCNGG | 3 cut(s) | 454, 598, 683 |
| BmtI | GCTAGC | 1 cut(s) | 377 |
| BpiI | GAAGAC | 1 cut(s) | 1650 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 413, 445 |
| BpmI | CTGGAG | 2 cut(s) | 704, 1659 |
| Bpu10I | CCTNAGC | 2 cut(s) | 91, 798 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 546 |
| BpuEI | CTTGAG | 3 cut(s) | 140, 290, 1379 |
| BsaAI | YACGTR | 1 cut(s) | 1286 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1317 |
| BsaJI | CCNNGG | 2 cut(s) | 6, 1236 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1309 |
| Bse118I | RCCGGY | 1 cut(s) | 209 |
| Bse3DI | GCAATG | 2 cut(s) | 67, 572 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1317 |
| BseBI | CCWGG | 3 cut(s) | 454, 598, 683 |
| BseDI | CCNNGG | 2 cut(s) | 6, 1236 |
| BseGI | GGATG | 4 cut(s) | 886, 887, 1318, 1432 |
| BseJI | GATNNNNATC | 1 cut(s) | 1317 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1309 |
| BseMI | GCAATG | 2 cut(s) | 67, 572 |
| BseMII | CTCAG | 8 cut(s) | 105, 176, 537, 627, 789, 933, 1110, 1379 |
| BseRI | GAGGAG | 1 cut(s) | 1256 |
| BseYI | CCCAGC | 1 cut(s) | 1074 |
| BsgI | GTGCAG | 2 cut(s) | 137, 1173 |
| BshFI | GGCC | 2 cut(s) | 5, 1409 |
| BsiHKAI | GWGCWC | 4 cut(s) | 135, 1291, 1621, 1670 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1089, 1517 |
| BsiSI | CCGG | 2 cut(s) | 210, 238 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1309 |
| BsmAI | GTCTC | 4 cut(s) | 165, 634, 669, 1389 |
| BsmBI | CGTCTC | 1 cut(s) | 1389 |
| BsnI | GGCC | 2 cut(s) | 5, 1409 |
| BsoBI | CYCGRG | 2 cut(s) | 1089, 1517 |
| Bsp1286I | GDGCHC | 4 cut(s) | 135, 1291, 1621, 1670 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 546 |
| BspACI | CCGC | 8 cut(s) | 11, 38, 296, 878, 974, 1252, 1545, 1594 |
| BspANI | GGCC | 2 cut(s) | 5, 1409 |
| BspCNI | CTCAG | 8 cut(s) | 104, 175, 538, 628, 790, 934, 1111, 1380 |
| BspHI | TCATGA | 1 cut(s) | 103 |
| BspLI | GGNNCC | 2 cut(s) | 217, 236 |
| BspMAI | CTGCAG | 3 cut(s) | 930, 1015, 1330 |
| BspOI | GCTAGC | 1 cut(s) | 377 |
| BspPI | GGATC | 4 cut(s) | 405, 765, 1425, 1536 |
| BspQI | GCTCTTC | 1 cut(s) | 1658 |
| BsrDI | GCAATG | 2 cut(s) | 67, 572 |
| BsrFI | RCCGGY | 1 cut(s) | 209 |
| BssAI | RCCGGY | 1 cut(s) | 209 |
| BssECI | CCNNGG | 2 cut(s) | 6, 1236 |
| BssSI | CACGAG | 1 cut(s) | 288 |
| BssT1I | CCWWGG | 1 cut(s) | 1236 |
| Bst2BI | CACGAG | 1 cut(s) | 288 |
| Bst2UI | CCWGG | 3 cut(s) | 454, 598, 683 |
| Bst4CI | ACNGT | 3 cut(s) | 567, 1021, 1679 |
| Bst6I | CTCTTC | 5 cut(s) | 216, 270, 297, 414, 1658 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 614, 632 |
| BstBAI | YACGTR | 1 cut(s) | 1286 |
| BstC8I | GCNNGC | 4 cut(s) | 375, 552, 1035, 1596 |
| BstF5I | GGATG | 4 cut(s) | 886, 887, 1318, 1432 |
| BstHHI | GCGC | 2 cut(s) | 355, 871 |
| BstMAI | GTCTC | 4 cut(s) | 165, 634, 669, 1389 |
| BstNI | CCWGG | 3 cut(s) | 454, 598, 683 |
| BstSCI | CCNGG | 3 cut(s) | 452, 596, 681 |
| BstSFI | CTRYAG | 3 cut(s) | 926, 1011, 1326 |
| BstV2I | GAAGAC | 1 cut(s) | 1650 |
| BstX2I | RGATCY | 3 cut(s) | 67, 1318, 1417 |
| BstYI | RGATCY | 3 cut(s) | 67, 1318, 1417 |
| BsuRI | GGCC | 2 cut(s) | 5, 1409 |
| BtgZI | GCGATG | 1 cut(s) | 111 |
| BtsCI | GGATG | 4 cut(s) | 886, 887, 1318, 1432 |
| BtsI | GCAGTG | 3 cut(s) | 701, 731, 923 |
| BtsIMutI | CAGTG | 5 cut(s) | 617, 701, 731, 923, 1116 |
| Cac8I | GCNNGC | 4 cut(s) | 375, 552, 1035, 1596 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1019 |
| CciI | TCATGA | 1 cut(s) | 103 |
| CfoI | GCGC | 2 cut(s) | 355, 871 |
| Cfr10I | RCCGGY | 1 cut(s) | 209 |
| Cfr13I | GGNCC | 2 cut(s) | 358, 1408 |
| Csp6I | GTAC | 2 cut(s) | 427, 1283 |
| CviAII | CATG | 7 cut(s) | 104, 1049, 1055, 1292, 1486, 1557, 1590 |
| CviQI | GTAC | 2 cut(s) | 427, 1283 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| Eam1104I | CTCTTC | 5 cut(s) | 216, 270, 297, 414, 1658 |
| EarI | CTCTTC | 5 cut(s) | 216, 270, 297, 414, 1658 |
| EciI | GGCGGA | 1 cut(s) | 1534 |
| Ecl136II | GAGCTC | 3 cut(s) | 133, 1619, 1668 |
| Eco130I | CCWWGG | 1 cut(s) | 1236 |
| Eco24I | GRGCYC | 3 cut(s) | 135, 1621, 1670 |
| Eco47I | GGWCC | 1 cut(s) | 358 |
| Eco53kI | GAGCTC | 3 cut(s) | 133, 1619, 1668 |
| Eco57I | CTGAAG | 5 cut(s) | 332, 399, 773, 1397, 1406 |
| Eco88I | CYCGRG | 2 cut(s) | 1089, 1517 |
| EcoICRI | GAGCTC | 3 cut(s) | 133, 1619, 1668 |
| EcoO109I | RGGNCCY | 2 cut(s) | 358, 1408 |
| EcoRI | GAATTC | 2 cut(s) | 149, 259 |
| EcoRII | CCWGG | 3 cut(s) | 452, 596, 681 |
| EcoT14I | CCWWGG | 1 cut(s) | 1236 |
| EcoT22I | ATGCAT | 1 cut(s) | 886 |
| EcoT38I | GRGCYC | 3 cut(s) | 135, 1621, 1670 |
| ErhI | CCWWGG | 1 cut(s) | 1236 |
| Esp3I | CGTCTC | 1 cut(s) | 1389 |
| FaeI | CATG | 7 cut(s) | 107, 1052, 1058, 1295, 1489, 1560, 1593 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 799, 831, 858, 890, 1017, 1049, 1554, 1586 |
| FatI | CATG | 7 cut(s) | 103, 1048, 1054, 1291, 1485, 1556, 1589 |
| FauI | CCCGC | 1 cut(s) | 1587 |
| FbaI | TGATCA | 1 cut(s) | 106 |
| FblI | GTMKAC | 1 cut(s) | 1523 |
| FokI | GGATG | 4 cut(s) | 874, 893, 1325, 1439 |
| FriOI | GRGCYC | 3 cut(s) | 135, 1621, 1670 |
| FspBI | CTAG | 5 cut(s) | 374, 519, 935, 1322, 1454 |
| GlaI | GCGC | 2 cut(s) | 354, 870 |
| GsaI | CCCAGC | 1 cut(s) | 1078 |
| GsuI | CTGGAG | 2 cut(s) | 704, 1659 |
| HaeIII | GGCC | 2 cut(s) | 5, 1409 |
| HapII | CCGG | 2 cut(s) | 210, 238 |
| HhaI | GCGC | 2 cut(s) | 355, 871 |
| Hin1II | CATG | 7 cut(s) | 107, 1052, 1058, 1295, 1489, 1560, 1593 |
| Hin6I | GCGC | 2 cut(s) | 353, 869 |
| HinP1I | GCGC | 2 cut(s) | 353, 869 |
| HincII | GTYRAC | 1 cut(s) | 1567 |
| HindII | GTYRAC | 1 cut(s) | 1567 |
| HinfI | GANTC | 7 cut(s) | 251, 344, 440, 950, 1175, 1337, 1520 |
| HpaI | GTTAAC | 1 cut(s) | 1567 |
| HpaII | CCGG | 2 cut(s) | 210, 238 |
| HphI | GGTGA | 4 cut(s) | 442, 998, 1031, 1529 |
| Hpy166II | GTNNAC | 2 cut(s) | 1524, 1567 |
| Hpy8I | GTNNAC | 2 cut(s) | 1524, 1567 |
| HpyAV | CCTTC | 4 cut(s) | 164, 748, 1303, 1421 |
| HpyCH4III | ACNGT | 3 cut(s) | 567, 1021, 1679 |
| HpyCH4IV | ACGT | 1 cut(s) | 1285 |
| HpySE526I | ACGT | 1 cut(s) | 1285 |
| Hsp92II | CATG | 7 cut(s) | 107, 1052, 1058, 1295, 1489, 1560, 1593 |
| HspAI | GCGC | 2 cut(s) | 353, 869 |
| Ksp22I | TGATCA | 1 cut(s) | 106 |
| KspAI | GTTAAC | 1 cut(s) | 1567 |
| LguI | GCTCTTC | 1 cut(s) | 1658 |
| LmnI | GCTCC | 2 cut(s) | 130, 240 |
| MaeI | CTAG | 5 cut(s) | 374, 519, 935, 1322, 1454 |
| MaeII | ACGT | 1 cut(s) | 1285 |
| MaeIII | GTNAC | 3 cut(s) | 124, 1114, 1348 |
| MfeI | CAATTG | 2 cut(s) | 28, 627 |
| MflI | RGATCY | 3 cut(s) | 67, 1318, 1417 |
| MhlI | GDGCHC | 4 cut(s) | 135, 1291, 1621, 1670 |
| MlyI | GAGTC | 5 cut(s) | 260, 434, 959, 1331, 1529 |
| MmeI | TCCRAC | 1 cut(s) | 375 |
| Mph1103I | ATGCAT | 1 cut(s) | 886 |
| MroXI | GAANNNNTTC | 2 cut(s) | 149, 174 |
| MseI | TTAA | 6 cut(s) | 408, 1044, 1257, 1476, 1566, 1613 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1053 |
| MspA1I | CMGCKG | 1 cut(s) | 1171 |
| MspI | CCGG | 2 cut(s) | 210, 238 |
| MspR9I | CCNGG | 3 cut(s) | 454, 598, 683 |
| MunI | CAATTG | 2 cut(s) | 28, 627 |
| MvaI | CCWGG | 3 cut(s) | 454, 598, 683 |
| NheI | GCTAGC | 1 cut(s) | 373 |
| NlaIII | CATG | 7 cut(s) | 107, 1052, 1058, 1295, 1489, 1560, 1593 |
| NlaIV | GGNNCC | 2 cut(s) | 217, 236 |
| NmeAIII | GCCGAG | 1 cut(s) | 31 |
| NmuCI | GTSAC | 2 cut(s) | 124, 1114 |
| NsiI | ATGCAT | 1 cut(s) | 886 |
| PaeR7I | CTCGAG | 2 cut(s) | 1089, 1517 |
| PagI | TCATGA | 1 cut(s) | 103 |
| PciSI | GCTCTTC | 1 cut(s) | 1658 |
| PdmI | GAANNNNTTC | 2 cut(s) | 149, 174 |
| PfeI | GAWTC | 2 cut(s) | 344, 1175 |
| PleI | GAGTC | 5 cut(s) | 259, 434, 958, 1331, 1528 |
| PpsI | GAGTC | 5 cut(s) | 259, 434, 958, 1331, 1528 |
| Ppu21I | YACGTR | 1 cut(s) | 1286 |
| PpuMI | RGGWCCY | 1 cut(s) | 358 |
| PsiI | TTATAA | 2 cut(s) | 1278, 1443 |
| Psp124BI | GAGCTC | 3 cut(s) | 135, 1621, 1670 |
| Psp5II | RGGWCCY | 1 cut(s) | 358 |
| Psp6I | CCWGG | 3 cut(s) | 452, 596, 681 |
| PspFI | CCCAGC | 1 cut(s) | 1074 |
| PspGI | CCWGG | 3 cut(s) | 452, 596, 681 |
| PspN4I | GGNNCC | 2 cut(s) | 217, 236 |
| PspPI | GGNCC | 2 cut(s) | 358, 1408 |
| PspPPI | RGGWCCY | 1 cut(s) | 358 |
| PspXI | VCTCGAGB | 1 cut(s) | 1517 |
| PstI | CTGCAG | 3 cut(s) | 930, 1015, 1330 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1019 |
| PsuI | RGATCY | 3 cut(s) | 67, 1318, 1417 |
| PvuII | CAGCTG | 1 cut(s) | 1171 |
| RsaI | GTAC | 2 cut(s) | 428, 1284 |
| RsaNI | GTAC | 2 cut(s) | 427, 1283 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1053 |
| SacI | GAGCTC | 3 cut(s) | 135, 1621, 1670 |
| SapI | GCTCTTC | 1 cut(s) | 1658 |
| SaqAI | TTAA | 6 cut(s) | 408, 1044, 1257, 1476, 1566, 1613 |
| Sau96I | GGNCC | 2 cut(s) | 358, 1408 |
| ScaI | AGTACT | 1 cut(s) | 428 |
| SchI | GAGTC | 5 cut(s) | 260, 434, 959, 1331, 1529 |
| ScrFI | CCNGG | 3 cut(s) | 454, 598, 683 |
| SduI | GDGCHC | 4 cut(s) | 135, 1291, 1621, 1670 |
| SfcI | CTRYAG | 3 cut(s) | 926, 1011, 1326 |
| Sfr274I | CTCGAG | 2 cut(s) | 1089, 1517 |
| SinI | GGWCC | 1 cut(s) | 358 |
| SlaI | CTCGAG | 2 cut(s) | 1089, 1517 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1053 |
| SmlI | CTYRAG | 5 cut(s) | 155, 269, 1089, 1358, 1517 |
| SmoI | CTYRAG | 5 cut(s) | 155, 269, 1089, 1358, 1517 |
| SsiI | CCGC | 8 cut(s) | 11, 38, 296, 878, 974, 1252, 1545, 1594 |
| SspMI | CTAG | 5 cut(s) | 374, 519, 935, 1322, 1454 |
| SstI | GAGCTC | 3 cut(s) | 135, 1621, 1670 |
| StyD4I | CCNGG | 3 cut(s) | 452, 596, 681 |
| StyI | CCWWGG | 1 cut(s) | 1236 |
| TaaI | ACNGT | 3 cut(s) | 567, 1021, 1679 |
| TaiI | ACGT | 1 cut(s) | 1288 |
| TaqI | TCGA | 4 cut(s) | 443, 726, 1090, 1518 |
| TatI | WGTACW | 1 cut(s) | 426 |
| TauI | GCSGC | 3 cut(s) | 14, 299, 977 |
| TfiI | GAWTC | 2 cut(s) | 344, 1175 |
| Tru1I | TTAA | 6 cut(s) | 408, 1044, 1257, 1476, 1566, 1613 |
| Tru9I | TTAA | 6 cut(s) | 408, 1044, 1257, 1476, 1566, 1613 |
| TscAI | CASTG | 5 cut(s) | 624, 708, 738, 930, 1123 |
| TseFI | GTSAC | 2 cut(s) | 124, 1114 |
| Tsp45I | GTSAC | 2 cut(s) | 124, 1114 |
| TspDTI | ATGAA | 4 cut(s) | 552, 807, 1278, 1641 |
| TspGWI | ACGGA | 2 cut(s) | 63, 143 |
| TspRI | CASTG | 5 cut(s) | 624, 708, 738, 930, 1123 |
| VpaK11BI | GGWCC | 1 cut(s) | 358 |
| XapI | RAATTY | 5 cut(s) | 149, 259, 446, 850, 1265 |
| XhoI | CTCGAG | 2 cut(s) | 1089, 1517 |
| XmiI | GTMKAC | 1 cut(s) | 1523 |
| XmnI | GAANNNNTTC | 2 cut(s) | 149, 174 |
| XspI | CTAG | 5 cut(s) | 374, 519, 935, 1322, 1454 |
| ZrmI | AGTACT | 1 cut(s) | 428 |
| Zsp2I | ATGCAT | 1 cut(s) | 886 |