Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr17

Orthogroup ID

OG0000750

Physical Location & Seq

Genomic Coordinates Forward (+)

22157885 .. 22162824

Gene Structure 4940 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2412 bp

ATGACCGATCAAGAGCCCAACGCGCCGGCGCCGACGGCGACGGCGATCATCGTCGATGACACGTACGAGTTCTTGGCTCCACGCTTCTTCGACTTCACAAAGGGCGAGAGCGAGGACGATAGGCGCAAGGCCGAGCTCTGGTTCGACTGCGCTCTAGCCTATGCTCCTTCACCCTTTATGCCTAAGATCAAGACTGGTAGATCCTTTACGATCGAGAGCATGTGTGACTTTAGCGAAGCAGATAAAATGGAGAAGAACTTGGAATCATCATCTGACTTAAAAGCTGATGATAAATCTATGGAAACTAAGCCTCAATCAGAGAACATGCCTGGTGAAGCCTTAACAGATGATGACAATTGTACCAGCAGAAATGGAAGTGTTTTGGGTACAAAATCTTCTATTAAGAAAACTGATTTAACCAAGGAGACTAGCAAACCTATCATTCAAGTGGAAACCGTAGCTTGCAGTCCAAGTCATGATGACAAATGTAATAGTGGAAATGGAAGTGTTTTGGGTGCAGTATCTTCTATTAAGAAAACTGATCTGACCAAGGGTAAGGAGAATAGTATACCTATCATTCAAGATGAAAATGAAGCTTGCACTCCAAAACCACCCATGAGTTATTCCAAGAAGGGGGGAGGCCTTGCGAGTCATTCCAAGAAGCACCAAACAGCTAAAAAGATAGCGAGCATGGTCAGAAACCCCTCAGCACTGAAGCAAAAAAGTCACTTACAGTCATCCCAAACTAAAAGCATTAAACCAAATAGTGTGAAAAGAGAAACACATGTGAAGAATGCAACTGGAACTCCCAAATTAGGACAGGAAAATCAGGCGATAAAGCGGCAGAAATTGGATGAAGGAAGATCTAGACAGATTCTAAATCCCAAACCCCAAGCATATCCCCACAAGTCAAAACTGGGTCATATAACTTCTTCAGCTGCAGTGCGAAAAGAGGACAGAAAACTTTATGTTAGGGAACCTGCAGCACCATTTGTTTCGATGGCTGAAATGATGAAAAGGTTCCAATCAAGTACCAGAGACTTGTCATTGCCGCATATTTCACATATGAAACCCAAACTCACCTTGACGAGGCCTAAGGAGCCTGAATTTGAAACATCCCAGCGTGTTCGTTCAGTGAGAGTAAAGAGTACTGCTGAGCTTGAAGAAGAGATGATGGCTAAAATTCCGAAGTTTAAGGCTCGACCATTAAACAAAAAGATTCTAGAAGCTTCATCATTGTCTGCAATACCAAGAAGTACACCCCAGCCACCAGAATTTCACGAATTCCATTTGGAGACAATGGCAAGGGCCAATCAGAGTGCAGAAACATCCTCGATAGCTTCCACCGAAGTGTCCCATCAGAATAATCCATGGAAGCCTCGTTTAGGGTCTTTTCTTACTGAACCTAAAACCCCTGTGCTACAAACATCATTGAGGGCTCGTCCACCCAGGGTGAAAAGTTCGTTTGAAATTGAACAGGAAGAACTCGAAAGAATCCCAAAATTCAAGGCCAAGCCTCTAAATAAGAAGATATTTGAAAGTAAAGGAGATATGGGGGTGTTCTGTAACGCCAAGAAACATGTGACCAAACCTCGGGAATTCCATTTTGCAACAAATGAAAGGATACCACCACAATCTTCGTCTGTTGTTGATCTATTTGATAAACTGTCGTTAAACGCAGAGCCTCACCAAAAACCAGTTCCAAGGAACACAACGCCAAACCCATTCAATCTCCACACAGAGGAAAGAGGGGCCGAGAAAGAAAGGAAATTCATTACTGAAGTCTGGCACAGGCAATTGGAAGAAGAAAGAGCGAGGGTTCCCAAAGCTAACCCATATCCTTATACCACTGATTACCCTGTGATCCCACCCAAGCCAGAGCCTAAGCAATGTACAAAACCGGAACCTTTCCAGCTGGAGAGTTTAGTGAGGCATGAGGAGGAATTGCAAAGGGAAATGGAAGAAAGACAGCGGAAGGAGAAAGAAGAAGCTCAGATGAGAGTGTTCAAGGCACAGCCAATCTTGAAAGAGGACCCAATTCCAGTTCCCGAAAAAGAACGCAAGCCTCTGACCCAAGTTCAAGAGTTCAATCTCCATGCTGATCATCGAGCTGTTGATAGAGCAGAATTTGATCACAAAGTTAGGGAGAAAGAGATGATGTATAAGAGATATAGAGAAGAGAGCGAGGCAGCAAGAATGGTGGAAGAAGAGAAGGCACTGAAACAACTCAGAAGGACATTGGTACCCCATGCAAGGCCAGTGCCTAATTTTGAGCATCCTTTCCTTCCCCAAAAGTGTCCTAAGGAAGCAACAAAACCAAAATCACCATATCTACGTGTGCTCCAACGGAAAGAGAGGCGAAAAATGGTGATCAACTCTGCGGTTTCCAGCGCAGCGGCACAGATGCGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000278 GO:0000280 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005819 GO:0005856 GO:0005874 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0007051 GO:0007052 GO:0007346 GO:0008017 GO:0008092 GO:0008150 GO:0009507 GO:0009524 GO:0009526 GO:0009536 GO:0009941 GO:0009987 GO:0010564 GO:0015630 GO:0015631 GO:0016043 GO:0022402 GO:0022607 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032886 GO:0033043 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044422 GO:0044424 GO:0044428 GO:0044430 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048285 GO:0050789 GO:0050794 GO:0051128 GO:0051225 GO:0051493 GO:0051726 GO:0060236 GO:0065007 GO:0070013 GO:0070507 GO:0070925 GO:0071840 GO:0090224 GO:0090307 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0140014 GO:1902850 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPX2 TPX2_importin

Protein Analysis

804

Amino Acids

91.51

Weight (kDa)

9.44

Isoelectric Point (pI)

54.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPX2_importin	PF12214	361 - 454	3.9e-30	Cell cycle regulated microtubule associated protein
TPX2_importin	PF12214	466 - 548	1e-18	Cell cycle regulated microtubule associated protein
TPX2	PF06886	696 - 771	1.3e-22	Targeting protein for Xklp2 (TPX2) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000750)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03780 AT1G03780 AT1G03780
fragaria_vesca	FvH4_2g11956 FvH4_5g28370 FvH4_5g28401 FvH4_5g28402 FvH4_5g28440 FvH4_5g28450 FvH4_5g28450 FvH4_5g28471 FvH4_5g28480 FvH4_5g28561 FvH4_6g25610 FvH4_6g25610 FvH4_6g25690 FvH4_6g25731 FvH4_6g26550 FvH4_6g26550 FvH4_6g26550 FvH4_6g26550 FvH4_6g26550 FvH4_6g26550 FvH4_6g26550 FvH4_6g26550 FvH4_6g26550 FvH4_6g26550 FvH4_6g26550 FvH4_6g26550 FvH4_6g26550 FvH4_c15g00040 FvH4_c17g00020 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090
malus_domestica	MD09G1243900.v1.1 MD17G1235800.v1.1
prunus_persica	Prupe.3G140300_v2.0.a1 Prupe.3G140300_v2.0.a1 Prupe.3G140300_v2.0.a1
pyrus_communis	pycom17g23880
rosa_chinensis	RchiOBHm_Chr2g0127601
rosa_laevigata	RLG00000018552 RLG00000018951
rosa_multiflora	Rmu_ssc0000200.1_g000020
rosa_roxburghii	Rroxscaffold_2G00116560 Rroxscaffold_2G00123480
rosa_rugosa	Rorug02G0272600
rosa_samantha	Rh2AG324600 Rh2BG333900 Rh2CG312100 Rh2DG352100
rosa_wichuraiana	Rw2G026360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	988
Acc65I	GGTACC	1 cut(s)	2242
AccB1I	GGYRCC	2 cut(s)	28, 2242
AccI	GTMKAC	1 cut(s)	568
AccII	CGCG	1 cut(s)	23
AciI	CCGC	5 cut(s)	841, 1052, 1972, 2381, 2396
AclWI	GGATC	2 cut(s)	195, 1858
AcsI	RAATTY	8 cut(s)	1106, 1182, 1274, 1283, 1502, 1598, 1769, 2126
AcuI	CTGAAG	3 cut(s)	734, 918, 1800
AcyI	GRCGYC	1 cut(s)	29
AfaI	GTAC	8 cut(s)	65, 361, 388, 1033, 1150, 1258, 1894, 2244
AfiI	CCNNNNNNNGG	8 cut(s)	138, 633, 815, 1089, 1385, 1593, 1741, 2253
AflIII	ACRYGT	4 cut(s)	60, 784, 1579, 2335
AjnI	CCWGG	2 cut(s)	328, 1448
AjuI	GAANNNNNNNTTGG	2 cut(s)	1683, 1715
AleI	CACNNNNGTG	1 cut(s)	1349
Alw21I	GWGCWC	2 cut(s)	138, 2343
Alw26I	GTCTC	3 cut(s)	419, 1032, 1289
AlwI	GGATC	2 cut(s)	195, 1858
Ama87I	CYCGRG	1 cut(s)	1593
AoxI	GGCC	7 cut(s)	129, 640, 1091, 1308, 1509, 1752, 2255
ApeKI	GCWGC	4 cut(s)	938, 983, 2189, 2393
ApoI	RAATTY	8 cut(s)	1106, 1182, 1274, 1283, 1502, 1598, 1769, 2126
Asp700I	GAANNNNTTC	1 cut(s)	1019
Asp718I	GGTACC	1 cut(s)	2242
AspLEI	GCGC	5 cut(s)	25, 31, 126, 152, 2393
AspS9I	GGNCC	3 cut(s)	1308, 1752, 2032
AsuHPI	GGTGA	7 cut(s)	162, 344, 1072, 1465, 1679, 2316, 2380
AvaI	CYCGRG	1 cut(s)	1593
AvaII	GGWCC	1 cut(s)	2032
AxyI	CCTNAGG	2 cut(s)	1095, 2301
BaeI	ACNNNNGTAYC	4 cut(s)	343, 376, 2226, 2259
BanI	GGYRCC	2 cut(s)	28, 2242
BanII	GRGCYC	3 cut(s)	18, 138, 1441
BarI	GAAGNNNNNNTAC	2 cut(s)	379, 411
Bbv12I	GWGCWC	2 cut(s)	138, 2343
BbvCI	CCTCAGC	1 cut(s)	706
BbvI	GCAGC	4 cut(s)	925, 995, 2201, 2405
BccI	CCATC	3 cut(s)	994, 1168, 1365
BceAI	ACGGC	2 cut(s)	51, 57
BciT130I	CCWGG	2 cut(s)	330, 1450
BciVI	GTATCC	1 cut(s)	1617
BclI	TGATCA	3 cut(s)	2101, 2131, 2370
BcoDI	GTCTC	3 cut(s)	419, 1032, 1289
BfaI	CTAG	4 cut(s)	155, 429, 867, 1223
BfmI	CTRYAG	2 cut(s)	939, 981
BfoI	RGCGCY	1 cut(s)	32
BfuAI	ACCTGC	1 cut(s)	988
BfuI	GTATCC	1 cut(s)	1617
BglII	AGATCT	1 cut(s)	863
BisI	GCNGC	7 cut(s)	842, 939, 984, 1052, 2190, 2394, 2397
BlpI	GCTNAGC	1 cut(s)	1155
BlsI	GCNGC	7 cut(s)	843, 940, 985, 1053, 2191, 2395, 2398
BmcAI	AGTACT	1 cut(s)	1150
Bme1390I	CCNGG	2 cut(s)	330, 1450
Bme18I	GGWCC	1 cut(s)	2032
BmeT110I	CYCGRG	1 cut(s)	1593
BmgT120I	GGNCC	3 cut(s)	1308, 1752, 2032
BmrFI	CCNGG	2 cut(s)	330, 1450
BmrI	ACTGGG	1 cut(s)	926
BmsI	GCATC	2 cut(s)	2284, 2394
BmuI	ACTGGG	1 cut(s)	926
BpmI	CTGGAG	1 cut(s)	1937
Bpu10I	CCTNAGC	2 cut(s)	706, 1884
Bpu1102I	GCTNAGC	1 cut(s)	1155
BsaAI	YACGTR	2 cut(s)	63, 2336
BsaHI	GRCGYC	1 cut(s)	29
BsaJI	CCNNGG	7 cut(s)	420, 549, 1370, 1448, 1449, 1592, 1703
BsaWI	WCCGGW	1 cut(s)	1900
BsaXI	ACNNNNNCTCC	4 cut(s)	790, 820, 2325, 2355
Bsc4I	CCNNNNNNNGG	8 cut(s)	138, 633, 815, 1089, 1385, 1593, 1741, 2253
Bse118I	RCCGGY	1 cut(s)	25
Bse1I	ACTGG	6 cut(s)	199, 805, 921, 1697, 2042, 2258
Bse21I	CCTNAGG	2 cut(s)	1095, 2301
Bse3DI	GCAATG	2 cut(s)	1046, 1895
BseBI	CCWGG	2 cut(s)	330, 1450
BseDI	CCNNGG	7 cut(s)	420, 549, 1370, 1448, 1449, 1592, 1703
BseGI	GGATG	5 cut(s)	737, 859, 1115, 1328, 2275
BseLI	CCNNNNNNNGG	8 cut(s)	138, 633, 815, 1089, 1385, 1593, 1741, 2253
BseMI	GCAATG	2 cut(s)	1046, 1895
BseMII	CTCAG	4 cut(s)	720, 1146, 2006, 2242
BseNI	ACTGG	6 cut(s)	199, 805, 921, 1697, 2042, 2258
BseRI	GAGGAG	1 cut(s)	1952
BseXI	GCAGC	4 cut(s)	925, 995, 2201, 2405
BseYI	CCCAGC	2 cut(s)	1119, 1263
BsgI	GTGCAG	2 cut(s)	537, 1341
Bsh1236I	CGCG	1 cut(s)	23
Bsh1285I	CGRYCG	1 cut(s)	213
BshFI	GGCC	7 cut(s)	131, 642, 1093, 1310, 1511, 1754, 2257
BshNI	GGYRCC	2 cut(s)	28, 2242
BsiEI	CGRYCG	1 cut(s)	213
BsiHKAI	GWGCWC	2 cut(s)	138, 2343
BsiHKCI	CYCGRG	1 cut(s)	1593
BsiSI	CCGG	2 cut(s)	26, 1901
BsiWI	CGTACG	1 cut(s)	63
BslFI	GGGAC	1 cut(s)	1339
BslI	CCNNNNNNNGG	8 cut(s)	138, 633, 815, 1089, 1385, 1593, 1741, 2253
BsmAI	GTCTC	3 cut(s)	419, 1032, 1289
BsmFI	GGGAC	1 cut(s)	1339
BsmI	GAATGC	1 cut(s)	799
BsnI	GGCC	7 cut(s)	131, 642, 1093, 1310, 1511, 1754, 2257
BsoBI	CYCGRG	1 cut(s)	1593
Bsp1286I	GDGCHC	4 cut(s)	18, 138, 1441, 2343
Bsp1407I	TGTACA	1 cut(s)	1892
Bsp1720I	GCTNAGC	1 cut(s)	1155
Bsp19I	CCATGG	1 cut(s)	1370
BspACI	CCGC	5 cut(s)	841, 1052, 1972, 2381, 2396
BspANI	GGCC	7 cut(s)	131, 642, 1093, 1310, 1511, 1754, 2257
BspCNI	CTCAG	4 cut(s)	719, 1147, 2005, 2241
BspFNI	CGCG	1 cut(s)	23
BspHI	TCATGA	1 cut(s)	475
BspMAI	CTGCAG	2 cut(s)	943, 985
BspMI	ACCTGC	1 cut(s)	988
BspPI	GGATC	2 cut(s)	195, 1858
BspT107I	GGYRCC	2 cut(s)	28, 2242
BsrDI	GCAATG	2 cut(s)	1046, 1895
BsrFI	RCCGGY	1 cut(s)	25
BsrGI	TGTACA	1 cut(s)	1892
BsrI	ACTGG	6 cut(s)	199, 805, 921, 1697, 2042, 2258
BssAI	RCCGGY	1 cut(s)	25
BssECI	CCNNGG	7 cut(s)	420, 549, 1370, 1448, 1449, 1592, 1703
BssNAI	GTATAC	1 cut(s)	569
BssNI	GRCGYC	1 cut(s)	29
BssT1I	CCWWGG	4 cut(s)	420, 549, 1370, 1703
Bst1107I	GTATAC	1 cut(s)	569
Bst2UI	CCWGG	2 cut(s)	330, 1450
Bst4CI	ACNGT	3 cut(s)	457, 735, 1668
Bst6I	CTCTTC	3 cut(s)	1161, 2172, 2202
BstACI	GRCGYC	1 cut(s)	29
BstAUI	TGTACA	1 cut(s)	1892
BstBAI	YACGTR	2 cut(s)	63, 2336
BstC8I	GCNNGC	5 cut(s)	27, 463, 598, 688, 2063
BstDEI	CTNAG	9 cut(s)	183, 306, 706, 1095, 1155, 1884, 1992, 2228, 2301
BstDSI	CCRYGG	1 cut(s)	1370
BstENI	CCTNNNNNAGG	2 cut(s)	1087, 1383
BstF5I	GGATG	5 cut(s)	737, 859, 1115, 1328, 2275
BstFNI	CGCG	1 cut(s)	23
BstH2I	RGCGCY	1 cut(s)	32
BstHHI	GCGC	5 cut(s)	25, 31, 126, 152, 2393
BstMAI	GTCTC	3 cut(s)	419, 1032, 1289
BstMCI	CGRYCG	1 cut(s)	213
BstMWI	GCNNNNNNNGC	3 cut(s)	22, 35, 1099
BstNI	CCWGG	2 cut(s)	330, 1450
BstNSI	RCATGY	4 cut(s)	223, 328, 788, 1583
BstSCI	CCNGG	2 cut(s)	328, 1448
BstSFI	CTRYAG	2 cut(s)	939, 981
BstUI	CGCG	1 cut(s)	23
BstV1I	GCAGC	4 cut(s)	925, 995, 2201, 2405
BstX2I	RGATCY	2 cut(s)	200, 863
BstYI	RGATCY	2 cut(s)	200, 863
BstZ17I	GTATAC	1 cut(s)	569
Bsu36I	CCTNAGG	2 cut(s)	1095, 2301
BsuI	GTATCC	1 cut(s)	1617
BsuRI	GGCC	7 cut(s)	131, 642, 1093, 1310, 1511, 1754, 2257
BtgI	CCRYGG	1 cut(s)	1370
BtsCI	GGATG	5 cut(s)	737, 859, 1115, 1328, 2275
BtsI	GCAGTG	1 cut(s)	948
BtsIMutI	CAGTG	6 cut(s)	710, 948, 1140, 1848, 2216, 2265
BveI	ACCTGC	1 cut(s)	988
Cac8I	GCNNGC	5 cut(s)	27, 463, 598, 688, 2063
CciI	TCATGA	1 cut(s)	475
CfoI	GCGC	5 cut(s)	25, 31, 126, 152, 2393
Cfr10I	RCCGGY	1 cut(s)	25
Cfr13I	GGNCC	3 cut(s)	1308, 1752, 2032
Csp6I	GTAC	8 cut(s)	64, 360, 387, 1032, 1149, 1257, 1893, 2243
CspCI	CAANNNNNGTGG	2 cut(s)	2181, 2216
CviQI	GTAC	8 cut(s)	64, 360, 387, 1032, 1149, 1257, 1893, 2243
DdeI	CTNAG	9 cut(s)	183, 306, 706, 1095, 1155, 1884, 1992, 2228, 2301
DinI	GGCGCC	1 cut(s)	30
Eam1104I	CTCTTC	3 cut(s)	1161, 2172, 2202
EarI	CTCTTC	3 cut(s)	1161, 2172, 2202
Ecl136II	GAGCTC	1 cut(s)	136
Eco130I	CCWWGG	4 cut(s)	420, 549, 1370, 1703
Eco147I	AGGCCT	2 cut(s)	642, 1093
Eco24I	GRGCYC	3 cut(s)	18, 138, 1441
Eco47I	GGWCC	1 cut(s)	2032
Eco53kI	GAGCTC	1 cut(s)	136
Eco57I	CTGAAG	3 cut(s)	734, 918, 1800
Eco81I	CCTNAGG	2 cut(s)	1095, 2301
Eco88I	CYCGRG	1 cut(s)	1593
EcoICRI	GAGCTC	1 cut(s)	136
EcoNI	CCTNNNNNAGG	2 cut(s)	1087, 1383
EcoO109I	RGGNCCY	1 cut(s)	2032
EcoRI	GAATTC	2 cut(s)	1283, 1598
EcoRII	CCWGG	2 cut(s)	328, 1448
EcoT14I	CCWWGG	4 cut(s)	420, 549, 1370, 1703
EcoT38I	GRGCYC	3 cut(s)	18, 138, 1441
EgeI	GGCGCC	1 cut(s)	30
EheI	GGCGCC	1 cut(s)	30
ErhI	CCWWGG	4 cut(s)	420, 549, 1370, 1703
FaqI	GGGAC	1 cut(s)	1339
FauNDI	CATATG	1 cut(s)	1065
FbaI	TGATCA	3 cut(s)	2101, 2131, 2370
FblI	GTMKAC	1 cut(s)	568
Fnu4HI	GCNGC	7 cut(s)	842, 939, 984, 1052, 2190, 2394, 2397
FokI	GGATG	5 cut(s)	724, 866, 1102, 1315, 2262
FriOI	GRGCYC	3 cut(s)	18, 138, 1441
Fsp4HI	GCNGC	7 cut(s)	842, 939, 984, 1052, 2190, 2394, 2397
FspBI	CTAG	4 cut(s)	155, 429, 867, 1223
GlaI	GCGC	5 cut(s)	24, 30, 125, 151, 2392
GluI	GCNGC	7 cut(s)	842, 939, 984, 1052, 2190, 2394, 2397
GsaI	CCCAGC	2 cut(s)	1123, 1267
GsuI	CTGGAG	1 cut(s)	1937
HaeII	RGCGCY	1 cut(s)	32
HaeIII	GGCC	7 cut(s)	131, 642, 1093, 1310, 1511, 1754, 2257
HapII	CCGG	2 cut(s)	26, 1901
HhaI	GCGC	5 cut(s)	25, 31, 126, 152, 2393
Hin1I	GRCGYC	1 cut(s)	29
Hin6I	GCGC	5 cut(s)	23, 29, 124, 150, 2391
HinP1I	GCGC	5 cut(s)	23, 29, 124, 150, 2391
HindIII	AAGCTT	2 cut(s)	594, 1227
HinfI	GANTC	5 cut(s)	263, 649, 874, 1219, 1494
HpaII	CCGG	2 cut(s)	26, 1901
HphI	GGTGA	7 cut(s)	162, 344, 1072, 1465, 1679, 2316, 2380
Hpy166II	GTNNAC	3 cut(s)	569, 1259, 1445
Hpy8I	GTNNAC	3 cut(s)	569, 1259, 1445
Hpy99I	CGWCG	3 cut(s)	37, 43, 56
HpyAV	CCTTC	7 cut(s)	177, 625, 851, 1969, 2206, 2226, 2294
HpyCH4III	ACNGT	3 cut(s)	457, 735, 1668
HpyCH4IV	ACGT	2 cut(s)	62, 2335
HpyF10VI	GCNNNNNNNGC	3 cut(s)	22, 35, 1099
HpyF3I	CTNAG	9 cut(s)	183, 306, 706, 1095, 1155, 1884, 1992, 2228, 2301
HpySE526I	ACGT	2 cut(s)	62, 2335
Hsp92I	GRCGYC	1 cut(s)	29
HspAI	GCGC	5 cut(s)	23, 29, 124, 150, 2391
KasI	GGCGCC	1 cut(s)	28
KpnI	GGTACC	1 cut(s)	2246
KroI	GCCGGC	1 cut(s)	25
KroNI	GCCGGC	1 cut(s)	27
Ksp22I	TGATCA	3 cut(s)	2101, 2131, 2370
LmnI	GCTCC	4 cut(s)	82, 169, 1099, 2346
Lsp1109I	GCAGC	4 cut(s)	925, 995, 2201, 2405
LweI	GCATC	2 cut(s)	2284, 2394
MaeI	CTAG	4 cut(s)	155, 429, 867, 1223
MaeII	ACGT	2 cut(s)	62, 2335
MaeIII	GTNAC	4 cut(s)	224, 725, 1565, 1582
MfeI	CAATTG	2 cut(s)	355, 1796
MflI	RGATCY	2 cut(s)	200, 863
MhlI	GDGCHC	4 cut(s)	18, 138, 1441, 2343
Mly113I	GGCGCC	1 cut(s)	29
MlyI	GAGTC	1 cut(s)	658
MmeI	TCCRAC	1 cut(s)	2368
MreI	CGCCGGCG	1 cut(s)	25
MroNI	GCCGGC	1 cut(s)	25
MroXI	GAANNNNTTC	1 cut(s)	1019
MseI	TTAA	9 cut(s)	278, 341, 402, 416, 531, 756, 1194, 1208, 1673
MslI	CAYNNNNRTG	2 cut(s)	446, 1349
MspA1I	CMGCKG	4 cut(s)	938, 1915, 1972, 2396
MspI	CCGG	2 cut(s)	26, 1901
MspR9I	CCNGG	2 cut(s)	330, 1450
MunI	CAATTG	2 cut(s)	355, 1796
Mva1269I	GAATGC	1 cut(s)	799
MvaI	CCWGG	2 cut(s)	330, 1450
MvnI	CGCG	1 cut(s)	23
MwoI	GCNNNNNNNGC	3 cut(s)	22, 35, 1099
NaeI	GCCGGC	1 cut(s)	27
NarI	GGCGCC	1 cut(s)	29
NcoI	CCATGG	1 cut(s)	1370
NdeI	CATATG	1 cut(s)	1065
NgoMIV	GCCGGC	1 cut(s)	25
NmeAIII	GCCGAG	2 cut(s)	157, 1780
NmuCI	GTSAC	3 cut(s)	224, 725, 1582
NspI	RCATGY	4 cut(s)	223, 328, 788, 1583
OliI	CACNNNNGTG	1 cut(s)	1349
PagI	TCATGA	1 cut(s)	475
PasI	CCCWGGG	1 cut(s)	1449
PceI	AGGCCT	2 cut(s)	642, 1093
PciI	ACATGT	2 cut(s)	784, 1579
PcsI	WCGNNNNNNNCGW	1 cut(s)	41
PctI	GAATGC	1 cut(s)	799
PdiI	GCCGGC	1 cut(s)	27
PdmI	GAANNNNTTC	1 cut(s)	1019
PfeI	GAWTC	4 cut(s)	263, 874, 1219, 1494
Pfl23II	CGTACG	1 cut(s)	63
PkrI	GCNGC	7 cut(s)	843, 940, 985, 1053, 2191, 2395, 2398
Ple19I	CGATCG	1 cut(s)	213
PleI	GAGTC	1 cut(s)	657
PluTI	GGCGCC	1 cut(s)	32
PpsI	GAGTC	1 cut(s)	657
Ppu21I	YACGTR	2 cut(s)	63, 2336
PpuMI	RGGWCCY	1 cut(s)	2032
PscI	ACATGT	2 cut(s)	784, 1579
Psp124BI	GAGCTC	1 cut(s)	138
Psp5II	RGGWCCY	1 cut(s)	2032
Psp6I	CCWGG	2 cut(s)	328, 1448
PspFI	CCCAGC	2 cut(s)	1119, 1263
PspGI	CCWGG	2 cut(s)	328, 1448
PspLI	CGTACG	1 cut(s)	63
PspPI	GGNCC	3 cut(s)	1308, 1752, 2032
PspPPI	RGGWCCY	1 cut(s)	2032
PstI	CTGCAG	2 cut(s)	943, 985
PsuI	RGATCY	2 cut(s)	200, 863
PvuI	CGATCG	1 cut(s)	213
PvuII	CAGCTG	2 cut(s)	938, 1915
RsaI	GTAC	8 cut(s)	65, 361, 388, 1033, 1150, 1258, 1894, 2244
RsaNI	GTAC	8 cut(s)	64, 360, 387, 1032, 1149, 1257, 1893, 2243
RseI	CAYNNNNRTG	2 cut(s)	446, 1349
SacI	GAGCTC	1 cut(s)	138
SaqAI	TTAA	9 cut(s)	278, 341, 402, 416, 531, 756, 1194, 1208, 1673
SatI	GCNGC	7 cut(s)	842, 939, 984, 1052, 2190, 2394, 2397
Sau96I	GGNCC	3 cut(s)	1308, 1752, 2032
ScaI	AGTACT	1 cut(s)	1150
SchI	GAGTC	1 cut(s)	658
ScrFI	CCNGG	2 cut(s)	330, 1450
SduI	GDGCHC	4 cut(s)	18, 138, 1441, 2343
SfaNI	GCATC	2 cut(s)	2284, 2394
SfcI	CTRYAG	2 cut(s)	939, 981
SfoI	GGCGCC	1 cut(s)	30
SgrAI	CRCCGGYG	1 cut(s)	25
SinI	GGWCC	1 cut(s)	2032
SmiMI	CAYNNNNRTG	2 cut(s)	446, 1349
SseBI	AGGCCT	2 cut(s)	642, 1093
SsiI	CCGC	5 cut(s)	841, 1052, 1972, 2381, 2396
SspDI	GGCGCC	1 cut(s)	28
SspMI	CTAG	4 cut(s)	155, 429, 867, 1223
SstI	GAGCTC	1 cut(s)	138
StuI	AGGCCT	2 cut(s)	642, 1093
StyD4I	CCNGG	2 cut(s)	328, 1448
StyI	CCWWGG	4 cut(s)	420, 549, 1370, 1703
TaaI	ACNGT	3 cut(s)	457, 735, 1668
TaiI	ACGT	2 cut(s)	65, 2338
TaqI	TCGA	9 cut(s)	54, 90, 144, 213, 998, 1201, 1334, 1488, 2107
TaqII	GACCGA	1 cut(s)	20
TatI	WGTACW	3 cut(s)	1148, 1256, 1892
TauI	GCSGC	3 cut(s)	844, 1054, 2399
TfiI	GAWTC	4 cut(s)	263, 874, 1219, 1494
Tru1I	TTAA	9 cut(s)	278, 341, 402, 416, 531, 756, 1194, 1208, 1673
Tru9I	TTAA	9 cut(s)	278, 341, 402, 416, 531, 756, 1194, 1208, 1673
TscAI	CASTG	6 cut(s)	717, 948, 1140, 1855, 2223, 2265
TseFI	GTSAC	3 cut(s)	224, 725, 1582
TseI	GCWGC	4 cut(s)	938, 983, 2189, 2393
Tsp45I	GTSAC	3 cut(s)	224, 725, 1582
TspDTI	ATGAA	8 cut(s)	600, 606, 870, 1028, 1082, 1221, 1632, 1762
TspGWI	ACGGA	1 cut(s)	2362
TspRI	CASTG	6 cut(s)	717, 948, 1140, 1855, 2223, 2265
VpaK11BI	GGWCC	1 cut(s)	2032
XagI	CCTNNNNNAGG	2 cut(s)	1087, 1383
XapI	RAATTY	8 cut(s)	1106, 1182, 1274, 1283, 1502, 1598, 1769, 2126
XbaI	TCTAGA	2 cut(s)	866, 1222
XceI	RCATGY	4 cut(s)	223, 328, 788, 1583
XmiI	GTMKAC	1 cut(s)	568
XmnI	GAANNNNTTC	1 cut(s)	1019
XspI	CTAG	4 cut(s)	155, 429, 867, 1223
ZrmI	AGTACT	1 cut(s)	1150

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.